4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on whole roots 140 mM NaCl 16 hour
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List of experiments correlated with "whole roots 140 mM NaCl 16 hour"  Help Download transcriptome of top 30
Score Experiment Correlation from
whole roots 140 mM NaCl 16 hour		 Correlation to
whole roots 140 mM NaCl 16 hour		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 whole roots 140 mM NaCl 16 hour 1.00 >More info 1.00 >More info whole roots standard Original data GEO bulk
2 whole roots 140 mM NaCl 32 hour 0.95 >More info 0.92 >More info whole roots standard Original data GEO bulk
3 whole roots 140 mM NaCl 4 hour 0.93 >More info 0.91 >More info whole roots standard Original data GEO bulk
4 Osmotic Stress 24 h (root) 0.80 >More info 0.81 >More info Stress mock 24 h (root) Original data Stress treatments
5 ABA 3 h 0.72 >More info 0.76 >More info Mock 3 h Original data Basic hormone treatment of seedlings
6 whole roots 140 mM NaCl 30 minutes 0.61 >More info 0.82 >More info whole roots standard Original data GEO bulk
7 whole roots 140 mM NaCl 1 hour 0.68 >More info 0.74 >More info whole roots standard Original data GEO bulk
8 NaCl Col 0.57 >More info 0.78 >More info Col Original data GEO bulk
9 C2 leaf-drought 0.70 >More info 0.65 >More info C2 leaf-well watered Original data GEO bulk
10 T6 leaf-drought 0.67 >More info 0.67 >More info T6 leaf-well watered Original data GEO bulk
11 root longitudinal zone-4 NaCl 0.62 >More info 0.72 >More info root longitudinal zone-4 Original data GEO bulk
12 root endodermis and quiescent center 40 mM NaCl 0.61 >More info 0.73 >More info root endodermis and quiescent center Original data GEO bulk
13 root BA 12h 0.61 >More info 0.72 >More info root control 12h boron (5mM) root Original data GEO bulk
14 WT salt 12 h 0.69 >More info 0.64 >More info WT salt 0 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
15 Salt Stress 24 h (shoot) 0.72 >More info 0.57 >More info Stress mock 24 h (shoot) Original data Stress treatments
16 WT leaf-drought 0.71 >More info 0.58 >More info WT leaf-well watered Original data GEO bulk
17 rosettes drought 0.70 >More info 0.59 >More info rosettes watered Original data GEO bulk
18 low water potential 0.70 >More info 0.59 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
19 rosettes WT drought 0.68 >More info 0.60 >More info rosettes WT watered Original data GEO bulk
20 Osmotic Stress 24 h (shoot) 0.71 >More info 0.57 >More info Stress mock 24 h (shoot) Original data Stress treatments
21 Salt Stress 24 h (root) 0.75 >More info 0.52 >More info Stress mock 24 h (root) Original data Stress treatments
22 rosettes myoox drought 0.67 >More info 0.59 >More info rosettes myoox watered Original data GEO bulk
23 rosettes atx drought 0.61 >More info 0.61 >More info rosettes atx watered Original data GEO bulk
24 T8 leaf-drought 0.64 >More info 0.55 >More info T8 leaf-well watered Original data GEO bulk
25 ABA 24h 0.55 >More info 0.63 >More info EtOH 24h 24hr Original data GEO bulk
26 ABA 1 h 0.40 >More info 0.74 >More info Mock 1 h Original data Basic hormone treatment of seedlings
27 WT (Col-0) inflorescence drought day 5 0.68 >More info 0.45 >More info WT (Col-0) inflorescence well-watered day 5 Unopen flower buds Original data GEO bulk
28 root columella root cap 40 mM NaCl 0.53 >More info 0.60 >More info root columella root cap Original data GEO bulk
29 root cells cortex 140mM NaCl 1 hour 0.57 >More info 0.54 >More info root cells cortex standard 1 hour root cells cortex Original data
30 root longitudinal zone-2 NaCl 0.42 >More info 0.69 >More info root longitudinal zone-2 Original data GEO bulk
31 root cells stele 140mM NaCl 1 hour 0.58 >More info 0.52 >More info root cells stele standard 1 hour root cells stele Original data
32 root cells cortex 140mM NaCl 8 hours 0.61 >More info 0.48 >More info root cells cortex standard 1 hour root cells cortex Original data
33 root stele 40 mM NaCls 0.48 >More info 0.61 >More info root stele Original data GEO bulk
34 Homozygous-AtcesA6 0.60 >More info 0.48 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
35 ABA 0.51 >More info 0.56 >More info control Original data GEO bulk
36 root longitudinal zone-3 NaCl 0.42 >More info 0.65 >More info root longitudinal zone-3 Original data GEO bulk
37 slr-1 0h NAA -0.58 >More info -0.49 >More info Col-0 0h NAA Original data GEO bulk
38 root cells stele 140mM NaCl 8 hours 0.55 >More info 0.51 >More info root cells stele standard 1 hour root cells stele Original data
39 hai1-2 low water potential 0.51 >More info 0.55 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
40 ABA DFPM 0.57 >More info 0.49 >More info control Original data GEO bulk
41 Col-0 leaf drought 0.59 >More info 0.46 >More info Col-0 leaf water leaf Original data GEO bulk
42 dor drought 0.57 >More info 0.48 >More info WT drought Original data GEO bulk
43 ABA+DMTU 0.52 >More info 0.52 >More info control Original data GEO bulk
44 Col-0 0h NAA 0.58 >More info 0.45 >More info Col-0 6h MOCK Original data GEO bulk
45 root cells endodermis 140mM NaCl 1 hour 0.54 >More info 0.49 >More info root cells endodermis standard 1 hour root cells endodermis Original data
46 xyl-grown cell culture- 1h 1mM Suc 0.26 >More info 0.77 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
47 Col-0 under 4 days salt 0.56 >More info 0.46 >More info Col-0 under control 4 days salt treatment rosette Original data
48 Heat no recovery 0.66 >More info 0.36 >More info Mock no recovery seedling Original data GEO bulk
49 WT 24H Cold 0.58 >More info 0.43 >More info WT control Original data GEO bulk
50 Col-0 +ABA LF 0.46 >More info 0.55 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
51 ABA SA 3h 0.43 >More info 0.58 >More info EtOH 3h 3hr Original data GEO bulk
52 root longitudinal zone-1 NaCl 0.41 >More info 0.60 >More info root longitudinal zone-1 Original data GEO bulk
53 ced1 -0.58 >More info -0.42 >More info WT PEG 6hr seedlings Original data GEO bulk
54 root cells stele 140mM NaCl 3 hours 0.58 >More info 0.41 >More info root cells stele standard 1 hour root cells stele Original data
55 WT 3H Cold 0.36 >More info 0.63 >More info WT control Original data GEO bulk
56 WT (Col-0) inflorescence drought day 10 0.58 >More info 0.40 >More info WT (Col-0) inflorescence well-watered day 10 Unopen flower buds Original data GEO bulk
57 24h +Pi -0.41 >More info -0.57 >More info 24h -Pi root Original data GEO bulk
58 root cells stele 140mM NaCl 32 hours 0.57 >More info 0.39 >More info root cells stele standard 1 hour root cells stele Original data
59 rsa1 salt 0 h 0.50 >More info 0.46 >More info WT salt 0 h Control seedlings Original data GEO bulk
60 WT (Col-0) inflorescence moderate drought day 5 0.55 >More info 0.41 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
61 SA 4mM 0.33 >More info 0.63 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
62 tetraploid 0.45 >More info 0.51 >More info diploid Original data GEO bulk
63 Col-O high light 0.54 >More info 0.41 >More info Col-O bule light Original data GEO bulk
64 afb3-1 2h KNO3 0.28 >More info 0.66 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
65 Ws 100mM NaCl 0.54 >More info 0.39 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
66 Ws leaf 100mM NaCl 0.54 >More info 0.39 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
67 Cold Stress 24 h (root) 0.57 >More info 0.36 >More info Stress mock 24 h (root) Original data Stress treatments
68 ABA 3h 0.41 >More info 0.52 >More info EtOH 3h 3hr Original data GEO bulk
69 Col0-PsmES4326-24hpi 0.31 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
70 ABA control 0.51 >More info 0.40 >More info No ABA control Original data GEO bulk
71 dorn1-1 Root MES buffer 30 min -0.36 >More info -0.55 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
72 rosette leaves bdg 0.34 >More info 0.55 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
73 siliques AtHb1 control 0.37 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
74 root cortex 40 mM NaCl 0.39 >More info 0.50 >More info root cortex Original data GEO bulk
75 root cells cortex 140mM NaCl 3 hours 0.56 >More info 0.32 >More info root cells cortex standard 1 hour root cells cortex Original data
76 naxillin 3h 0.55 >More info 0.33 >More info before treatment naxillin root Original data GEO bulk
77 hsfa1 quadruple mutant 0.51 >More info 0.37 >More info WT (Col-0) whole seedling Original data GEO bulk
78 DUO1 induced 12h 0.64 >More info 0.23 >More info 12hr-not-induced whole plant Original data GEO bulk
79 Col-0 2h NAA 0.50 >More info 0.36 >More info Col-0 6h MOCK Original data GEO bulk
80 Laer pretreat GA Flg22 1h 0.14 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
81 msh1 recA3 untreated -0.29 >More info -0.55 >More info WT untreated above-ground parts Original data GEO bulk
82 ABA JA 3h 0.32 >More info 0.52 >More info EtOH 3h 3hr Original data GEO bulk
83 Col0 roots 2hr KNO3 nitrogen -0.18 >More info -0.66 >More info Col0 roots 2hr KCl control root Original data GEO bulk
84 ahg2-1abi1-1 -0.55 >More info -0.27 >More info WT (Col) control Original data GEO bulk
85 dicamba 0.52 >More info 0.29 >More info WT mock whole seedling Original data GEO bulk
86 Leafminer damaged seedlings 0.24 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
87 DUO1 induced 24h 0.54 >More info 0.25 >More info 24hr-not-induced whole plant Original data GEO bulk
88 rid4 IBA -0.53 >More info -0.26 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
89 Light 3day hml 0.23 >More info 0.56 >More info 0h hml Original data
90 rli 0.53 >More info 0.25 >More info WT whole plant Original data GEO bulk
91 GA 120min 0.19 >More info 0.59 >More info CON120 GA 120 min. root tips Original data GEO bulk
92 4C 1h 0.27 >More info 0.51 >More info 4C 0h Original data GEO bulk
93 dorn1-1 Root 100 mM ATP 30 min -0.25 >More info -0.52 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
94 bri1-116 0.03 >More info 0.73 >More info Col seedling Original data GEO bulk
95 root cells endodermis and quiescent center -Fe 0.58 >More info 0.17 >More info whole roots standard Original data GEO bulk
96 seed germinating in countinuous light 24h SL 0.07 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
97 spx1 spx2 no Pi 0.53 >More info 0.20 >More info WT no Pi seedlings Original data
98 seedling h S Exp -0.16 >More info -0.56 >More info seedling -S Exp seedling Original data
99 Col BTH 0.04 >More info 0.67 >More info Col rosettes Original data GEO bulk
100 Col-0 +ABA GC 0.21 >More info 0.50 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
101 Heat shock optimum 0.06 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
102 GA4 3 h (ga1 seed) 0.51 >More info 0.18 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
103 root cells columella root cap -Fe 0.51 >More info 0.18 >More info whole roots standard Original data GEO bulk
104 Shoot apex inflorescence (after bolting) 0.03 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
105 camta1 leaf drought -0.58 >More info -0.10 >More info Col-0 leaf drought leaf Original data GEO bulk
106 -Sulfate 24 h 0.18 >More info 0.50 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
107 WT Atum 1h -0.17 >More info -0.50 >More info WT 0h Leaf tissue Original data GEO bulk
108 MYB46-GR DEX 0.06 >More info 0.61 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
109 root cells -Fe 0.50 >More info 0.16 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
110 spores of Gigaspora rosea -0.56 >More info -0.09 >More info Control Original data GEO bulk
111 pGL1::GL1-GR Dex 4 hours 0.56 >More info 0.00 >More info pGL1::GL1-GR mock 4 hours Original data GEO bulk
112 IAA7mII over-expressor IAA Treated -0.18 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
113 aln-1 0.51 >More info -0.01 >More info Col-0 Aerial part of seedlings Original data
114 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
115 shoot control p35S -0.03 >More info 0.51 >More info shoot control total Original data GEO bulk
116 35S:VND7-VP16-GR+CHX -0.10 >More info 0.58 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
117 shoot hypoxia p35S -0.06 >More info 0.53 >More info shoot hypoxia total Original data GEO bulk
118 ABA 0.68 >More info -0.22 >More info control Original data GEO bulk
119 35S:ATR1 like miR 0.08 >More info -0.52 >More info WT for miR Original data GEO bulk
120 Imbibed 1 h (seed) -0.10 >More info 0.50 >More info Dry seed Original data Time course of early seed germination