4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root cells cortex 140mM NaCl 3 hours
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List of experiments correlated with "root cells cortex 140mM NaCl 3 hours"  Help Download transcriptome of top 30
Score Experiment Correlation from
root cells cortex 140mM NaCl 3 hours		 Correlation to
root cells cortex 140mM NaCl 3 hours		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root cells cortex 140mM NaCl 3 hours 1.00 >More info 1.00 >More info root cells cortex standard 1 hour root cells cortex Original data
2 root cells cortex 140mM NaCl 8 hours 0.88 >More info 0.84 >More info root cells cortex standard 1 hour root cells cortex Original data
3 root cells endodermis 140mM NaCl 3 hours 0.83 >More info 0.81 >More info root cells endodermis standard 1 hour root cells endodermis Original data
4 root cells cortex 140mM NaCl 20 hours 0.79 >More info 0.82 >More info root cells cortex standard 1 hour root cells cortex Original data
5 root cells stele 140mM NaCl 3 hours 0.78 >More info 0.83 >More info root cells stele standard 1 hour root cells stele Original data
6 root cells cortex 140mM NaCl 1 hour 0.78 >More info 0.82 >More info root cells cortex standard 1 hour root cells cortex Original data
7 root cells cortex 140mM NaCl 48 hours 0.79 >More info 0.81 >More info root cells cortex standard 1 hour root cells cortex Original data
8 root cells stele 140mM NaCl 8 hours 0.77 >More info 0.82 >More info root cells stele standard 1 hour root cells stele Original data
9 root cells cortex 140mM NaCl 32 hours 0.77 >More info 0.82 >More info root cells cortex standard 1 hour root cells cortex Original data
10 root cells endodermis 140mM NaCl 8 hours 0.80 >More info 0.78 >More info root cells endodermis standard 1 hour root cells endodermis Original data
11 root cells endodermis 140mM NaCl 1 hour 0.77 >More info 0.77 >More info root cells endodermis standard 1 hour root cells endodermis Original data
12 root cells epidermis 140mM NaCl 3 hours 0.72 >More info 0.82 >More info root cells epidermis standard 1 hour root cells epidermis Original data
13 root cells stele 140mM NaCl 1 hour 0.73 >More info 0.80 >More info root cells stele standard 1 hour root cells stele Original data
14 root cells endodermis 140mM NaCl 48 hours 0.75 >More info 0.78 >More info root cells endodermis standard 1 hour root cells endodermis Original data
15 root cells endodermis 140mM NaCl 20 hours 0.74 >More info 0.77 >More info root cells endodermis standard 1 hour root cells endodermis Original data
16 root cells epidermis 140mM NaCl 8 hours 0.68 >More info 0.81 >More info root cells epidermis standard 1 hour root cells epidermis Original data
17 root cells stele 140mM NaCl 20 hours 0.69 >More info 0.80 >More info root cells stele standard 1 hour root cells stele Original data
18 root cells endodermis 140mM NaCl 32 hours 0.73 >More info 0.76 >More info root cells endodermis standard 1 hour root cells endodermis Original data
19 root cells stele 140mM NaCl 32 hours 0.68 >More info 0.78 >More info root cells stele standard 1 hour root cells stele Original data
20 root cells epidermis 140mM NaCl 48 hours 0.65 >More info 0.81 >More info root cells epidermis standard 1 hour root cells epidermis Original data
21 root cells stele 140mM NaCl 48 hours 0.66 >More info 0.79 >More info root cells stele standard 1 hour root cells stele Original data
22 root cells epidermis 140mM NaCl 20 hours 0.65 >More info 0.78 >More info root cells epidermis standard 1 hour root cells epidermis Original data
23 root cells epidermis 140mM NaCl 32 hours 0.61 >More info 0.79 >More info root cells epidermis standard 1 hour root cells epidermis Original data
24 whole roots 140 mM NaCl 4 hour 0.55 >More info 0.79 >More info whole roots standard Original data GEO bulk
25 AgNO3 3 h 0.57 >More info 0.76 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
26 root cells epidermis 140mM NaCl 1 hour 0.55 >More info 0.74 >More info root cells epidermis standard 1 hour root cells epidermis Original data
27 root longitudinal zone-4 NaCl 0.55 >More info 0.73 >More info root longitudinal zone-4 Original data GEO bulk
28 bbx24 in Simulated Shade -0.52 >More info -0.70 >More info WT in simulated shade shade seedling Original data
29 root endodermis and quiescent center 40 mM NaCl 0.53 >More info 0.69 >More info root endodermis and quiescent center Original data GEO bulk
30 root Dosed gold 0.63 >More info 0.56 >More info root No gold .125 mM gold 24 h roots Original data
31 0.125 mM gold 24 h 0.63 >More info 0.56 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
32 root epidermis and lateral root cap pH4.6 0.52 >More info 0.67 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
33 root cortex pH4.6 0.50 >More info 0.67 >More info root cortex pH5.7 Original data GEO bulk
34 line J1551-5 days control + 2 days salt s 0.47 >More info 0.69 >More info line J1551-7 days-control Original data
35 5-Triiodobenzoic acid3 h 0.53 >More info 0.62 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
36 24h +Pi -0.58 >More info -0.56 >More info 24h -Pi root Original data GEO bulk
37 root stele pH4.6 0.50 >More info 0.64 >More info root stele pH5.7 Original data GEO bulk
38 B.cinerea 18 h infection 0.45 >More info 0.69 >More info Mock 18 h Original data Botrytis cinerea infection
39 Botrytis cinerea 18h 0.45 >More info 0.69 >More info control 18h Original data GEO bulk
40 NaCl Col 0.49 >More info 0.64 >More info Col Original data GEO bulk
41 oas-a1.1 Cd 18h 0.45 >More info 0.67 >More info Cd 18h root Root Original data GEO bulk
42 Col-0 low oxygen 0.49 >More info 0.63 >More info Col-0 control low oxygen root Original data GEO bulk
43 root endodermis and quiescent center pH4.6 0.47 >More info 0.65 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
44 TNT-seedlings 0.46 >More info 0.63 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
45 gun1gun5 far-red pretreated -0.49 >More info -0.58 >More info WT far-red pretreated Original data GEO bulk
46 OXUPB1-2 meristematic zone 0.53 >More info 0.53 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
47 Fenclorim 4hr 0.53 >More info 0.53 >More info Acetone 4hr root Original data GEO bulk
48 (Col-0)+100 uM As 0.48 >More info 0.58 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
49 whole roots 140 mM NaCl 1 hour 0.49 >More info 0.56 >More info whole roots standard Original data GEO bulk
50 CMP 4hr 0.47 >More info 0.55 >More info Acetone 4hr root Original data GEO bulk
51 (Col-0)+200 uM As 0.45 >More info 0.57 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
52 rhd2 0.45 >More info 0.56 >More info WT Small excised segments of primary root tissue corresponding to root-hair elongation zone Original data GEO bulk
53 whole roots 140 mM NaCl 30 minutes 0.45 >More info 0.55 >More info whole roots standard Original data GEO bulk
54 Chitosan 3h Treatment 0.52 >More info 0.47 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
55 6h +Pi -0.43 >More info -0.56 >More info 6h -Pi root Original data GEO bulk
56 pepr1-1 Pepr2-3 +Pep2 2h -0.40 >More info -0.59 >More info WT +Pep2 2h Pep2 Original data GEO bulk
57 Whole root - low pH 12H 0.50 >More info 0.48 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
58 Fe starvation 72 h 0.44 >More info 0.54 >More info Control Original data GEO bulk
59 whole roots -Fe 72 hour 0.44 >More info 0.54 >More info whole roots standard Original data GEO bulk
60 ABA DFPM 0.51 >More info 0.46 >More info control Original data GEO bulk
61 plant (tga2-5-6) 4h phytoprostane A1 0.42 >More info 0.55 >More info plant (tga2-5-6) 4h control Original data GEO bulk
62 Botrytis cinerea 48h 0.36 >More info 0.61 >More info control 48h Original data GEO bulk
63 Leafminer damaged seedlings 0.41 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
64 line J2731-5 days control + 2 days salt s 0.39 >More info 0.56 >More info line J2731-7 days-control Original data
65 Phytoprostane A1 4 h 0.45 >More info 0.50 >More info Col-0 Original data GEO bulk
66 whole roots -Fe 48 hour 0.45 >More info 0.50 >More info whole roots standard Original data GEO bulk
67 Phaseolicola 2 h (leaf) 0.40 >More info 0.54 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
68 Mutant axr3-1 (IAA) 0.34 >More info 0.60 >More info Col (IAA) Original data GEO bulk
69 Col0-PsmES4326-24hpi 0.33 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
70 (Ws-2)+100 uM As 0.44 >More info 0.50 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
71 CMP 24hr 0.50 >More info 0.43 >More info Acetone 24hr root Original data GEO bulk
72 R. solani AG8 0.43 >More info 0.50 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
73 CeO2 germinant -0.25 >More info -0.67 >More info Millipore Water germinant CeO2 seedling Original data
74 root longitudinal zone-3 pH 4.6 0.35 >More info 0.57 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
75 sid2-2 9 hpi A. brassicicola 0.34 >More info 0.57 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
76 siliques AtHb1 control 0.38 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
77 Col BTH 0.23 >More info 0.67 >More info Col rosettes Original data GEO bulk
78 Chemically 0.33 >More info 0.57 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
79 whole roots 140 mM NaCl 16 hour 0.32 >More info 0.56 >More info whole roots standard Original data GEO bulk
80 root epidermis and lateral root cap 40 mM NaCl 0.37 >More info 0.51 >More info root epidermis and lateral root cap Original data GEO bulk
81 Shoot -Cs 0.30 >More info 0.58 >More info Control-shoot Original data GEO bulk
82 Mutant axr3-1 0.35 >More info 0.52 >More info Col Original data GEO bulk
83 Laer pretreat GA Flg22 1h 0.16 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
84 toc1-1-53hr 0.29 >More info 0.58 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
85 chito-tetramer 0.30 >More info 0.57 >More info Col Mock Original data GEO bulk
86 hira-root -0.53 >More info -0.33 >More info WT-root root Original data
87 seed germinating in countinuous light 24h SL 0.19 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
88 WT+H2O2 0.33 >More info 0.52 >More info WT H2O2 Original data GEO bulk
89 inhibitor B Treated 0.34 >More info 0.50 >More info Negative Control Original data GEO bulk
90 inhibitor A Treated 0.29 >More info 0.55 >More info Negative Control Original data GEO bulk
91 Heat shock optimum 0.18 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
92 red illumination +lincomycin 0.09 >More info 0.74 >More info red illumination -lincomycin Original data GEO bulk
93 whole roots -Fe 6 hour 0.29 >More info 0.53 >More info whole roots standard Original data GEO bulk
94 chito-octamer 0.32 >More info 0.50 >More info Col Mock Original data GEO bulk
95 root longitudinal zone-3 NaCl 0.28 >More info 0.54 >More info root longitudinal zone-3 Original data GEO bulk
96 roottip hypoxia total 0.18 >More info 0.63 >More info roottip control total Original data GEO bulk
97 M6PR transgenic leaf 100mM NaCl -0.31 >More info -0.50 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
98 ein2-1 9 hpi A. brassicicola 0.27 >More info 0.51 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
99 C2 leaf-drought 0.27 >More info 0.50 >More info C2 leaf-well watered Original data GEO bulk
100 bri1-116 0.04 >More info 0.73 >More info Col seedling Original data GEO bulk
101 cell culture 4 h phytoprostane A1 0.25 >More info 0.51 >More info cell culture 4 h control Original data GEO bulk
102 Starch sheath 5 days MS incubation 0.22 >More info 0.54 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
103 Whole root - S 48H 0.17 >More info 0.59 >More info Whole root - S 0H Original data GEO bulk
104 Brassinolide 0.5 h (det2) 0.09 >More info 0.66 >More info Mock 0.5 h (det2) Original data Basic hormone treatment of seedlings
105 Shoot apex inflorescence (after bolting) 0.09 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
106 toc1-1-73hr 0.21 >More info 0.53 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
107 S14-150 0.23 >More info 0.50 >More info wt Original data GEO bulk
108 short 8-degree- 0.21 >More info 0.51 >More info control short Original data GEO bulk
109 IAA7mII over-expressor IAA Treated 0.02 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
110 Whole root - S 24H 0.18 >More info 0.52 >More info Whole root - S 0H Original data GEO bulk
111 Light 0.19 >More info 0.50 >More info Control Original data GEO bulk
112 short 12-degree- 0.15 >More info 0.51 >More info control short Original data GEO bulk
113 Naphthyl- phthalamic acid 3 h 0.10 >More info 0.55 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
114 root epidermis and lateral root cap -S 0.10 >More info 0.55 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
115 root - 01% oxygen - 2h 0.11 >More info 0.52 >More info root - 21% oxygen - 2h Original data GEO bulk
116 GO5; harvested 8h continiously maintained in high
CO2;		 -0.13 >More info -0.50 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
117 tfl1-1-23ºC 0.04 >More info 0.53 >More info WT-23ºC Original data GEO bulk
118 Col0 roots 2hr KNO3 nitrogen -0.04 >More info -0.52 >More info Col0 roots 2hr KCl control root Original data GEO bulk
119 CCA1-ox 6am non-polysomal 0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
120 root - 08% oxygen - 30min -0.04 >More info 0.51 >More info root - 21% oxygen - 30min Original data GEO bulk
121 Red/FR Light45min -0.08 >More info 0.54 >More info FarRed Light 45min Original data Light treatments
122 root - 04% oxygen - 2h -0.21 >More info 0.61 >More info root - 21% oxygen - 2h Original data GEO bulk