4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root cells epidermis 140mM NaCl 20 hours
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List of experiments correlated with "root cells epidermis 140mM NaCl 20 hours"  Help Download transcriptome of top 30
Score Experiment Correlation from
root cells epidermis 140mM NaCl 20 hours		 Correlation to
root cells epidermis 140mM NaCl 20 hours		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root cells epidermis 140mM NaCl 20 hours 1.00 >More info 1.00 >More info root cells epidermis standard 1 hour root cells epidermis Original data
2 root cells epidermis 140mM NaCl 8 hours 0.92 >More info 0.90 >More info root cells epidermis standard 1 hour root cells epidermis Original data
3 root cells epidermis 140mM NaCl 48 hours 0.92 >More info 0.90 >More info root cells epidermis standard 1 hour root cells epidermis Original data
4 root cells epidermis 140mM NaCl 32 hours 0.89 >More info 0.91 >More info root cells epidermis standard 1 hour root cells epidermis Original data
5 root cells epidermis 140mM NaCl 3 hours 0.88 >More info 0.89 >More info root cells epidermis standard 1 hour root cells epidermis Original data
6 root cells epidermis 140mM NaCl 1 hour 0.82 >More info 0.86 >More info root cells epidermis standard 1 hour root cells epidermis Original data
7 root cells stele 140mM NaCl 32 hours 0.85 >More info 0.80 >More info root cells stele standard 1 hour root cells stele Original data
8 root cells stele 140mM NaCl 20 hours 0.85 >More info 0.80 >More info root cells stele standard 1 hour root cells stele Original data
9 root cells stele 140mM NaCl 48 hours 0.85 >More info 0.80 >More info root cells stele standard 1 hour root cells stele Original data
10 root cells cortex 140mM NaCl 32 hours 0.82 >More info 0.81 >More info root cells cortex standard 1 hour root cells cortex Original data
11 root cells endodermis 140mM NaCl 32 hours 0.83 >More info 0.78 >More info root cells endodermis standard 1 hour root cells endodermis Original data
12 root cells endodermis 140mM NaCl 48 hours 0.82 >More info 0.78 >More info root cells endodermis standard 1 hour root cells endodermis Original data
13 root cells stele 140mM NaCl 1 hour 0.81 >More info 0.78 >More info root cells stele standard 1 hour root cells stele Original data
14 root cells cortex 140mM NaCl 20 hours 0.83 >More info 0.76 >More info root cells cortex standard 1 hour root cells cortex Original data
15 root cells cortex 140mM NaCl 48 hours 0.83 >More info 0.76 >More info root cells cortex standard 1 hour root cells cortex Original data
16 root cells stele 140mM NaCl 8 hours 0.83 >More info 0.75 >More info root cells stele standard 1 hour root cells stele Original data
17 root cells endodermis 140mM NaCl 20 hours 0.81 >More info 0.77 >More info root cells endodermis standard 1 hour root cells endodermis Original data
18 root cells cortex 140mM NaCl 8 hours 0.84 >More info 0.74 >More info root cells cortex standard 1 hour root cells cortex Original data
19 root cells stele 140mM NaCl 3 hours 0.80 >More info 0.77 >More info root cells stele standard 1 hour root cells stele Original data
20 root cells endodermis 140mM NaCl 3 hours 0.78 >More info 0.72 >More info root cells endodermis standard 1 hour root cells endodermis Original data
21 root cells cortex 140mM NaCl 1 hour 0.77 >More info 0.73 >More info root cells cortex standard 1 hour root cells cortex Original data
22 root cells endodermis 140mM NaCl 8 hours 0.79 >More info 0.70 >More info root cells endodermis standard 1 hour root cells endodermis Original data
23 root cells endodermis 140mM NaCl 1 hour 0.71 >More info 0.73 >More info root cells endodermis standard 1 hour root cells endodermis Original data
24 line J1551-5 days control + 2 days salt s 0.67 >More info 0.76 >More info line J1551-7 days-control Original data
25 root cells cortex 140mM NaCl 3 hours 0.78 >More info 0.65 >More info root cells cortex standard 1 hour root cells cortex Original data
26 upb1-1 elongation zone -0.57 >More info -0.69 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
27 root epidermis and lateral root cap -S 0.55 >More info 0.70 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
28 root epidermis and lateral root cap pH4.6 0.61 >More info 0.64 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
29 bbx24 in Simulated Shade -0.49 >More info -0.74 >More info WT in simulated shade shade seedling Original data
30 root stele pH4.6 0.60 >More info 0.62 >More info root stele pH5.7 Original data GEO bulk
31 line J2731-5 days control + 2 days salt s 0.52 >More info 0.66 >More info line J2731-7 days-control Original data
32 rhd2 0.56 >More info 0.61 >More info WT Small excised segments of primary root tissue corresponding to root-hair elongation zone Original data GEO bulk
33 OXUPB1-2 meristematic zone 0.53 >More info 0.61 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
34 root longitudinal zone-4 NaCl 0.56 >More info 0.56 >More info root longitudinal zone-4 Original data GEO bulk
35 Col-0 low oxygen 0.59 >More info 0.51 >More info Col-0 control low oxygen root Original data GEO bulk
36 24h +Pi -0.56 >More info -0.52 >More info 24h -Pi root Original data GEO bulk
37 NaCl Col 0.54 >More info 0.53 >More info Col Original data GEO bulk
38 bri1-116 0.32 >More info 0.73 >More info Col seedling Original data GEO bulk
39 root cortex pH4.6 0.46 >More info 0.59 >More info root cortex pH5.7 Original data GEO bulk
40 whole roots -Fe 6 hour 0.37 >More info 0.67 >More info whole roots standard Original data GEO bulk
41 root Dosed gold 0.54 >More info 0.49 >More info root No gold .125 mM gold 24 h roots Original data
42 0.125 mM gold 24 h 0.54 >More info 0.49 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
43 WT Root Hypoxia 0.44 >More info 0.58 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
44 roots IAA 0.46 >More info 0.56 >More info roots mock Original data GEO bulk
45 epidermis auxin 0.48 >More info 0.54 >More info epidermis control 5 uM indole-3-acetic acid epidermis Original data GEO bulk
46 Heat shock optimum 0.35 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
47 Chemically 0.37 >More info 0.63 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
48 inhibitor B Treated 0.50 >More info 0.49 >More info Negative Control Original data GEO bulk
49 seed germinating in countinuous light 24h SL 0.32 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
50 red illumination +lincomycin 0.23 >More info 0.76 >More info red illumination -lincomycin Original data GEO bulk
51 whole roots 140 mM NaCl 1 hour 0.49 >More info 0.50 >More info whole roots standard Original data GEO bulk
52 Inflorescences Trp1 0.31 >More info 0.68 >More info Inflorescences ler inflorescences Original data GEO bulk
53 SCL3 OE -0.53 >More info -0.45 >More info Col-0 whole root Original data GEO bulk
54 SHR-GR Time 1H Dex -0.39 >More info -0.59 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
55 Shoot apex inflorescence (after bolting) 0.32 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
56 root - 04% oxygen - 2h 0.22 >More info 0.75 >More info root - 21% oxygen - 2h Original data GEO bulk
57 root hypoxia total 0.44 >More info 0.52 >More info root control total Original data GEO bulk
58 Cs root -0.43 >More info -0.53 >More info control root Original data GEO bulk
59 roottip hypoxia total 0.32 >More info 0.63 >More info roottip control total Original data GEO bulk
60 root stele -S 0.38 >More info 0.57 >More info root stele pH5.7 Original data GEO bulk
61 root longitudinal zone-3 pH 4.6 0.35 >More info 0.59 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
62 2 hr Hypoxia Total RNA 0.50 >More info 0.43 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
63 whole roots 140 mM NaCl 4 hour 0.37 >More info 0.55 >More info whole roots standard Original data GEO bulk
64 SCR 96hr-S 0.41 >More info 0.51 >More info SCR 0hr endodermis Original data
65 P.syringae vir 4 h (leaf) 0.28 >More info 0.63 >More info Mock 4 h (leaf) Original data Elicitor treatments
66 AgNO3 3 h 0.31 >More info 0.60 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
67 5-Triiodobenzoic acid3 h 0.31 >More info 0.58 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
68 TNT-seedlings 0.26 >More info 0.61 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
69 Whole root - low pH 12H 0.36 >More info 0.51 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
70 Col-0 wt Hypoxic 0.30 >More info 0.57 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
71 6h +Pi -0.33 >More info -0.52 >More info 6h -Pi root Original data GEO bulk
72 root longitudinal zone-3 NaCl 0.34 >More info 0.51 >More info root longitudinal zone-3 Original data GEO bulk
73 root - 01% oxygen - 48h 0.32 >More info 0.52 >More info root - 21% oxygen - 48h Original data GEO bulk
74 root - 08% oxygen - 30min 0.15 >More info 0.68 >More info root - 21% oxygen - 30min Original data GEO bulk
75 siliques AtHb1 control 0.31 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
76 seedling 30 min S Exp -0.17 >More info -0.66 >More info seedling -S Exp seedling Original data
77 WT Shoot Hypoxia 0.21 >More info 0.61 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
78 toc1-1-81hr 0.30 >More info 0.51 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
79 oas-a1.1 root -0.29 >More info -0.51 >More info WT-Untreated Root Original data GEO bulk
80 BAM8-Lig Ox untreated 0.28 >More info 0.52 >More info WT untreated none shoot Original data
81 Cs shoot -0.20 >More info -0.58 >More info control shoot Original data GEO bulk
82 toc1-1-73hr 0.25 >More info 0.52 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
83 sfr3 control 0.27 >More info 0.50 >More info WT control All aerial tissue Original data GEO bulk
84 Mutant axr3-1 (IAA) 0.20 >More info 0.56 >More info Col (IAA) Original data GEO bulk
85 root - 01% oxygen - 2h 0.16 >More info 0.60 >More info root - 21% oxygen - 2h Original data GEO bulk
86 8hr-pH4.5 0.25 >More info 0.50 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
87 toc1-1-53hr 0.18 >More info 0.57 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
88 whole roots 140 mM NaCl 32 hour 0.25 >More info 0.50 >More info whole roots standard Original data GEO bulk
89 shoot hypoxia total 0.20 >More info 0.54 >More info shoot control total Original data GEO bulk
90 toc1-1-85hr 0.23 >More info 0.50 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
91 stele pSHR 0h BL 0.57 >More info 0.15 >More info WR 35S 0h BL brassinosteroid root Original data
92 JA 3h 0.15 >More info 0.56 >More info EtOH 3h 3hr Original data GEO bulk
93 Methyl Jasmonate 0.5 h 0.11 >More info 0.58 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
94 Methyl Jasmonate 1 h 0.11 >More info 0.58 >More info Mock 1 h Original data Basic hormone treatment of seedlings
95 Leafminer damaged seedlings 0.12 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
96 root - 04% oxygen - 48h 0.16 >More info 0.51 >More info root - 21% oxygen - 48h Original data GEO bulk
97 toc1-1-77hr 0.16 >More info 0.51 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
98 Col BTH 0.00 >More info 0.67 >More info Col rosettes Original data GEO bulk
99 SCR-GR Time 6H Dex -0.51 >More info -0.11 >More info SCR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
100 21h-DC3000 avrRpm1 0.09 >More info 0.52 >More info 21h-DC3000 leaves Original data GEO bulk
101 Whole root - low pH 1H 0.09 >More info 0.52 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
102 Col0-PsmES4326-24hpi -0.08 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
103 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
104 Laer pretreat GA Flg22 1h -0.23 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
105 IAA7mII over-expressor IAA Treated -0.26 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
106 Aerobic e1 ate2 -0.18 >More info 0.52 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk