4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root cells epidermis 140mM NaCl 3 hours
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List of experiments correlated with "root cells epidermis 140mM NaCl 3 hours"  Help Download transcriptome of top 30
Score Experiment Correlation from
root cells epidermis 140mM NaCl 3 hours		 Correlation to
root cells epidermis 140mM NaCl 3 hours		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root cells epidermis 140mM NaCl 3 hours 1.00 >More info 1.00 >More info root cells epidermis standard 1 hour root cells epidermis Original data
2 root cells epidermis 140mM NaCl 8 hours 0.93 >More info 0.90 >More info root cells epidermis standard 1 hour root cells epidermis Original data
3 root cells epidermis 140mM NaCl 1 hour 0.89 >More info 0.90 >More info root cells epidermis standard 1 hour root cells epidermis Original data
4 root cells epidermis 140mM NaCl 20 hours 0.89 >More info 0.88 >More info root cells epidermis standard 1 hour root cells epidermis Original data
5 root cells epidermis 140mM NaCl 48 hours 0.89 >More info 0.86 >More info root cells epidermis standard 1 hour root cells epidermis Original data
6 root cells epidermis 140mM NaCl 32 hours 0.87 >More info 0.87 >More info root cells epidermis standard 1 hour root cells epidermis Original data
7 root cells stele 140mM NaCl 3 hours 0.85 >More info 0.80 >More info root cells stele standard 1 hour root cells stele Original data
8 root cells stele 140mM NaCl 1 hour 0.84 >More info 0.80 >More info root cells stele standard 1 hour root cells stele Original data
9 root cells cortex 140mM NaCl 1 hour 0.84 >More info 0.79 >More info root cells cortex standard 1 hour root cells cortex Original data
10 root cells stele 140mM NaCl 8 hours 0.85 >More info 0.76 >More info root cells stele standard 1 hour root cells stele Original data
11 root cells stele 140mM NaCl 48 hours 0.83 >More info 0.78 >More info root cells stele standard 1 hour root cells stele Original data
12 root cells stele 140mM NaCl 32 hours 0.82 >More info 0.77 >More info root cells stele standard 1 hour root cells stele Original data
13 root cells endodermis 140mM NaCl 3 hours 0.81 >More info 0.76 >More info root cells endodermis standard 1 hour root cells endodermis Original data
14 root cells cortex 140mM NaCl 32 hours 0.80 >More info 0.77 >More info root cells cortex standard 1 hour root cells cortex Original data
15 root cells cortex 140mM NaCl 8 hours 0.83 >More info 0.74 >More info root cells cortex standard 1 hour root cells cortex Original data
16 root cells stele 140mM NaCl 20 hours 0.80 >More info 0.76 >More info root cells stele standard 1 hour root cells stele Original data
17 root cells endodermis 140mM NaCl 1 hour 0.80 >More info 0.76 >More info root cells endodermis standard 1 hour root cells endodermis Original data
18 root cells cortex 140mM NaCl 48 hours 0.83 >More info 0.73 >More info root cells cortex standard 1 hour root cells cortex Original data
19 root cells endodermis 140mM NaCl 48 hours 0.81 >More info 0.75 >More info root cells endodermis standard 1 hour root cells endodermis Original data
20 root cells endodermis 140mM NaCl 32 hours 0.80 >More info 0.75 >More info root cells endodermis standard 1 hour root cells endodermis Original data
21 root cells cortex 140mM NaCl 3 hours 0.82 >More info 0.72 >More info root cells cortex standard 1 hour root cells cortex Original data
22 root cells cortex 140mM NaCl 20 hours 0.81 >More info 0.72 >More info root cells cortex standard 1 hour root cells cortex Original data
23 root cells endodermis 140mM NaCl 20 hours 0.79 >More info 0.73 >More info root cells endodermis standard 1 hour root cells endodermis Original data
24 root cells endodermis 140mM NaCl 8 hours 0.81 >More info 0.69 >More info root cells endodermis standard 1 hour root cells endodermis Original data
25 line J1551-5 days control + 2 days salt s 0.73 >More info 0.74 >More info line J1551-7 days-control Original data
26 root longitudinal zone-4 NaCl 0.68 >More info 0.71 >More info root longitudinal zone-4 Original data GEO bulk
27 root epidermis and lateral root cap pH4.6 0.69 >More info 0.68 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
28 NaCl Col 0.67 >More info 0.69 >More info Col Original data GEO bulk
29 root epidermis and lateral root cap -S 0.64 >More info 0.71 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
30 bbx24 in Simulated Shade -0.60 >More info -0.73 >More info WT in simulated shade shade seedling Original data
31 upb1-1 elongation zone -0.61 >More info -0.71 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
32 rhd2 0.66 >More info 0.64 >More info WT Small excised segments of primary root tissue corresponding to root-hair elongation zone Original data GEO bulk
33 root stele pH4.6 0.68 >More info 0.60 >More info root stele pH5.7 Original data GEO bulk
34 whole roots 140 mM NaCl 4 hour 0.54 >More info 0.72 >More info whole roots standard Original data GEO bulk
35 whole roots 140 mM NaCl 1 hour 0.63 >More info 0.62 >More info whole roots standard Original data GEO bulk
36 OXUPB1-2 meristematic zone 0.61 >More info 0.61 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
37 Chemically 0.46 >More info 0.76 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
38 line J2731-5 days control + 2 days salt s 0.51 >More info 0.69 >More info line J2731-7 days-control Original data
39 root endodermis and quiescent center 40 mM NaCl 0.47 >More info 0.71 >More info root endodermis and quiescent center Original data GEO bulk
40 24h +Pi -0.60 >More info -0.55 >More info 24h -Pi root Original data GEO bulk
41 root Dosed gold 0.65 >More info 0.50 >More info root No gold .125 mM gold 24 h roots Original data
42 root cortex pH4.6 0.55 >More info 0.60 >More info root cortex pH5.7 Original data GEO bulk
43 0.125 mM gold 24 h 0.65 >More info 0.50 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
44 inhibitor B Treated 0.62 >More info 0.52 >More info Negative Control Original data GEO bulk
45 Col-0 low oxygen 0.64 >More info 0.49 >More info Col-0 control low oxygen root Original data GEO bulk
46 whole roots 140 mM NaCl 30 minutes 0.55 >More info 0.56 >More info whole roots standard Original data GEO bulk
47 epidermis auxin 0.57 >More info 0.53 >More info epidermis control 5 uM indole-3-acetic acid epidermis Original data GEO bulk
48 AgNO3 3 h 0.41 >More info 0.69 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
49 M6PR transgenic leaf 100mM NaCl -0.57 >More info -0.52 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
50 35S::RSL4 -0.49 >More info -0.60 >More info Col-0 Control root Original data GEO bulk
51 SCR 48hr-S 0.53 >More info 0.55 >More info SCR 0hr endodermis Original data
52 root stele -S 0.50 >More info 0.58 >More info root stele pH5.7 Original data GEO bulk
53 SCR 72hr-S 0.51 >More info 0.57 >More info SCR 0hr endodermis Original data
54 SCR 96hr-S 0.51 >More info 0.57 >More info SCR 0hr endodermis Original data
55 whole roots -Fe 6 hour 0.45 >More info 0.62 >More info whole roots standard Original data GEO bulk
56 red illumination +lincomycin 0.32 >More info 0.75 >More info red illumination -lincomycin Original data GEO bulk
57 roots IAA 0.50 >More info 0.57 >More info roots mock Original data GEO bulk
58 TNT-seedlings 0.38 >More info 0.69 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
59 5-Triiodobenzoic acid3 h 0.45 >More info 0.60 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
60 IAA/inhibitor B Treated 0.50 >More info 0.54 >More info IAA Treated Original data GEO bulk
61 Shoot apex inflorescence (after bolting) 0.38 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
62 bri1-116 0.30 >More info 0.73 >More info Col seedling Original data GEO bulk
63 seed germinating in countinuous light 24h SL 0.36 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
64 SCR 24hr-S 0.50 >More info 0.52 >More info SCR 0hr endodermis Original data
65 root longitudinal zone-3 pH 4.6 0.46 >More info 0.56 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
66 Heat shock optimum 0.36 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
67 columella auxin 0.52 >More info 0.48 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
68 Inflorescences Trp1 0.37 >More info 0.63 >More info Inflorescences ler inflorescences Original data GEO bulk
69 Cs root -0.49 >More info -0.50 >More info control root Original data GEO bulk
70 6h +Pi -0.39 >More info -0.59 >More info 6h -Pi root Original data GEO bulk
71 oas-a1.1 Cd 18h 0.40 >More info 0.56 >More info Cd 18h root Root Original data GEO bulk
72 GA4 3 h (ga1 seed) 0.54 >More info 0.42 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
73 Mutant arf2-6 (IAA) 0.50 >More info 0.46 >More info Col (IAA) Original data GEO bulk
74 dicamba 0.51 >More info 0.45 >More info WT mock whole seedling Original data GEO bulk
75 root epidermis and lateral root cap 40 mM NaCl 0.54 >More info 0.42 >More info root epidermis and lateral root cap Original data GEO bulk
76 aux1 mutant roots air -0.55 >More info -0.40 >More info roots IAA Original data GEO bulk
77 pericycle auxin 0.52 >More info 0.43 >More info pericycle control 5 uM indole-3-acetic acid pericycle Original data GEO bulk
78 Starch sheath 2 days NAA 0.45 >More info 0.50 >More info Starch sheath T0 Stem starch sheath under NAA in vitro treatment before cell divission laser capture microdissection Original data GEO bulk
79 root longitudinal zone-3 NaCl 0.37 >More info 0.58 >More info root longitudinal zone-3 Original data GEO bulk
80 2hr continuous KCl and MSX control PeR cell -0.50 >More info -0.44 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
81 roottip hypoxia total 0.33 >More info 0.61 >More info roottip control total Original data GEO bulk
82 SHR-GR Time 1H Dex -0.44 >More info -0.50 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
83 Chitosan 3h Treatment 0.44 >More info 0.50 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
84 toc1-1-73hr 0.37 >More info 0.56 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
85 protoplasted roots pH4.6 0.57 >More info 0.36 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
86 root control pSHR 0.55 >More info 0.37 >More info root control total control root Original data GEO bulk
87 toc1-1-85hr 0.37 >More info 0.54 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
88 6-trichlorophenoxyacetic acid 3 h 0.50 >More info 0.41 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
89 toc1-1-81hr 0.39 >More info 0.50 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
90 toc1-1-53hr 0.28 >More info 0.60 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
91 Whole root - low pH 24H 0.38 >More info 0.50 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
92 phr1 Shoot-Pi 0.59 >More info 0.29 >More info WT Root-Pi shoots Original data GEO bulk
93 hira-root -0.51 >More info -0.36 >More info WT-root root Original data
94 Mutant axr3-1 0.30 >More info 0.56 >More info Col Original data GEO bulk
95 root cells columella root cap -Fe 0.50 >More info 0.36 >More info whole roots standard Original data GEO bulk
96 BAM8-Lig Ox untreated 0.35 >More info 0.51 >More info WT untreated none shoot Original data
97 RRE1 Chitin 0.51 >More info 0.34 >More info Chitin Original data GEO bulk
98 root hypoxia pSHR 0.51 >More info 0.34 >More info root hypoxia total hypoxia root Original data GEO bulk
99 Col leaf 100mM NaCl 0.53 >More info 0.32 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
100 Col leaf 100mM NaCl 0.53 >More info 0.32 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
101 Col 100mM NaCl 0.53 >More info 0.32 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
102 CeO2 germinant -0.30 >More info -0.55 >More info Millipore Water germinant CeO2 seedling Original data
103 T101A 10mM NH4NO3 -0.57 >More info -0.28 >More info col 10mM NH4NO3 Root Original data
104 P.syringae vir 4 h (leaf) 0.35 >More info 0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
105 Mutant axr3-1 (IAA) 0.23 >More info 0.62 >More info Col (IAA) Original data GEO bulk
106 siliques AtHb1 control 0.32 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
107 root longitudinal zone-1 NaCl 0.32 >More info 0.52 >More info root longitudinal zone-1 Original data GEO bulk
108 Cs shoot -0.24 >More info -0.60 >More info control shoot Original data GEO bulk
109 cpctry 0.30 >More info 0.53 >More info Col Original data GEO bulk
110 Root -Cs 0.50 >More info 0.32 >More info Control-root Original data GEO bulk
111 Naphthyl- phthalamic acid 3 h 0.28 >More info 0.53 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
112 T101D 10mM NH4NO3 -0.59 >More info -0.22 >More info col 10mM NH4NO3 Root Original data
113 mp-B4149 mutant IAA 0.53 >More info 0.27 >More info GR-bdl IAA Original data GEO bulk
114 oas-a1.1 Cd 24h 0.29 >More info 0.50 >More info Cd 24h root Shoot Original data GEO bulk
115 21h-DC3000 avrRpm1 0.22 >More info 0.57 >More info 21h-DC3000 leaves Original data GEO bulk
116 8hr-pH4.5 0.28 >More info 0.50 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
117 toc1-1-77hr 0.26 >More info 0.52 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
118 Whole root - S 48H 0.23 >More info 0.54 >More info Whole root - S 0H Original data GEO bulk
119 chl1-5 10mM NH4NO3 -0.51 >More info -0.25 >More info col 10mM NH4NO3 Root Original data
120 Methyl Jasmonate 0.5 h 0.14 >More info 0.60 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
121 root - 04% oxygen - 2h 0.03 >More info 0.70 >More info root - 21% oxygen - 2h Original data GEO bulk
122 mutant-line409 -0.17 >More info -0.55 >More info WT-control whole plant Original data GEO bulk
123 stele pSHR 0h BL 0.60 >More info 0.12 >More info WR 35S 0h BL brassinosteroid root Original data
124 root - 08% oxygen - 30min 0.09 >More info 0.62 >More info root - 21% oxygen - 30min Original data GEO bulk
125 eds16 whole leaf 1dpi 0.18 >More info 0.52 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
126 root control pRPL11C 0.54 >More info 0.15 >More info root control total control root Original data GEO bulk
127 phosphate-starved -0.13 >More info -0.56 >More info control shoot tissue Original data GEO bulk
128 seedling 30 min S Exp -0.10 >More info -0.58 >More info seedling -S Exp seedling Original data
129 root control p35S 0.54 >More info 0.12 >More info root control total control root Original data GEO bulk
130 MYB46-GR DEX -0.14 >More info -0.52 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
131 Col BTH -0.01 >More info 0.67 >More info Col rosettes Original data GEO bulk
132 SCR-GR Time 6H Dex -0.50 >More info -0.14 >More info SCR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
133 myb61 xylem 0.07 >More info 0.57 >More info wt xylem xylem Original data GEO bulk
134 Leafminer damaged seedlings 0.04 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
135 Methyl Jasmonate 1 h 0.00 >More info 0.55 >More info Mock 1 h Original data Basic hormone treatment of seedlings
136 CCA1-ox 6am non-polysomal 0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
137 Col0-PsmES4326-24hpi -0.18 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
138 IAA7mII over-expressor IAA Treated -0.26 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
139 Laer pretreat GA Flg22 1h -0.29 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
140 shoots bhlh100/101 100uM Fe 0.11 >More info -0.50 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
141 endosperm ABA 0.50 >More info -0.13 >More info endosperm-control ABA endosperm Original data GEO bulk