4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on 35S::RSL4
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "35S::RSL4"  Help Download transcriptome of top 30
Score Experiment Correlation from
35S::RSL4		 Correlation to
35S::RSL4		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 35S::RSL4 1.00 >More info 1.00 >More info Col-0 Control root Original data GEO bulk
2 IAA/inhibitor B Treated -0.63 >More info -0.53 >More info IAA Treated Original data GEO bulk
3 Mutant axr3-1 (IAA) -0.56 >More info -0.57 >More info Col (IAA) Original data GEO bulk
4 root cells epidermis 140mM NaCl 8 hours -0.61 >More info -0.50 >More info root cells epidermis standard 1 hour root cells epidermis Original data
5 root cells endodermis and quiescent center -Fe -0.62 >More info -0.49 >More info whole roots standard Original data GEO bulk
6 inhibitor B Treated -0.58 >More info -0.53 >More info Negative Control Original data GEO bulk
7 AsAKiin11 T2 0.57 >More info 0.53 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
8 Selenate (root) -0.49 >More info -0.61 >More info Ws (root) Original data GEO bulk
9 Root Selenate -0.49 >More info -0.61 >More info Root control 40 micromolar selenate Root Original data GEO bulk
10 root cells epidermis 140mM NaCl 3 hours -0.60 >More info -0.49 >More info root cells epidermis standard 1 hour root cells epidermis Original data
11 root cells epidermis 140mM NaCl 48 hours -0.62 >More info -0.45 >More info root cells epidermis standard 1 hour root cells epidermis Original data
12 FLIGHT TAGESB plate6 ROOTS -0.51 >More info -0.56 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
13 myb61 cork -0.52 >More info -0.55 >More info wt cork cork Original data GEO bulk
14 root cells epidermis 140mM NaCl 32 hours -0.58 >More info -0.48 >More info root cells epidermis standard 1 hour root cells epidermis Original data
15 Mutant arf2-6 (IAA) -0.52 >More info -0.54 >More info Col (IAA) Original data GEO bulk
16 TNT-seedlings -0.39 >More info -0.67 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
17 ex2 flu dark 8hours/30 minute light -0.54 >More info -0.51 >More info col dark 8hours/30 minute light Original data GEO bulk
18 root hypoxia pSCR -0.45 >More info -0.57 >More info root hypoxia total hypoxia root Original data GEO bulk
19 Col-0 wt Hypoxic -0.48 >More info -0.54 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
20 4C 2h(SOIL) -0.48 >More info -0.54 >More info 4C 0h(SOIL) Original data GEO bulk
21 CDB1-Knockout 0.48 >More info 0.54 >More info WT Original data GEO bulk
22 WT Root Hypoxia -0.55 >More info -0.46 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
23 ex1 flu dark 8hours/30 minute light -0.52 >More info -0.48 >More info col dark 8hours/30 minute light Original data GEO bulk
24 Col leaf 100mM NaCl -0.57 >More info -0.43 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
25 Col leaf 100mM NaCl -0.57 >More info -0.43 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
26 Kas -Fe 24h Roots 0.51 >More info 0.49 >More info Kas +Fe 24h Roots Original data GEO bulk
27 Col 100mM NaCl -0.57 >More info -0.43 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
28 Kas-1 -Fe 24h 0.51 >More info 0.49 >More info Kas-1 +Fe 24h roots Original data GEO bulk
29 WT 3H Cold -0.43 >More info -0.57 >More info WT control Original data GEO bulk
30 myb61 xylem -0.40 >More info -0.59 >More info wt xylem xylem Original data GEO bulk
31 WT-Dry -0.51 >More info -0.47 >More info WT-CK dehydration treatment 1h Original data
32 flu dark 8hours/30 minute light -0.50 >More info -0.48 >More info col dark 8hours/30 minute light Original data GEO bulk
33 ERF115OE roottip5days 0.55 >More info 0.42 >More info Col-0 roottip5days root tips Original data
34 root control pGL2 -0.42 >More info -0.55 >More info root control total control root Original data GEO bulk
35 root hypoxia pGL2 -0.51 >More info -0.45 >More info root hypoxia total hypoxia root Original data GEO bulk
36 Laer pretreat GA Flg22 1h 0.25 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
37 4C 1h -0.45 >More info -0.51 >More info 4C 0h Original data GEO bulk
38 Col(gl) leaf 100mM NaCl 0.56 >More info 0.39 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
39 Col(gl) 100mM NaCl 0.56 >More info 0.39 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
40 whole roots 140 mM NaCl 30 minutes -0.52 >More info -0.43 >More info whole roots standard Original data GEO bulk
41 hira-protoplast -0.42 >More info -0.53 >More info WT-protoplast protoplast Original data
42 hira-root 0.54 >More info 0.40 >More info WT-root root Original data
43 Light -0.34 >More info -0.60 >More info Control Original data GEO bulk
44 upb1-1 elongation zone 0.37 >More info 0.56 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
45 bak1-3 +Pep2 2h -0.50 >More info -0.43 >More info WT +Pep2 2h Pep2 Original data GEO bulk
46 whole roots 140 mM NaCl 1 hour -0.52 >More info -0.39 >More info whole roots standard Original data GEO bulk
47 rli -0.53 >More info -0.37 >More info WT whole plant Original data GEO bulk
48 roottip hypoxia total -0.40 >More info -0.50 >More info roottip control total Original data GEO bulk
49 abi1 hypocotyl -0.39 >More info -0.51 >More info Ler hypocotyl hypocotyl Original data GEO bulk
50 bbx24 in Simulated Shade 0.33 >More info 0.57 >More info WT in simulated shade shade seedling Original data
51 vte2 leaves 0h LT 0.33 >More info 0.56 >More info Col leaves 0h LT h 9-11th adult leaves Original data
52 axr1 hypocotyl -0.56 >More info -0.32 >More info wt hypocotyl hypocotyl Original data GEO bulk
53 root cells -Fe -0.56 >More info -0.31 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
54 toc1-1-85hr -0.32 >More info -0.55 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
55 Col-0 Root 100 mM ATP 30 min -0.60 >More info -0.27 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
56 rsa1 salt 12 h -0.54 >More info -0.32 >More info WT salt 12 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
57 Dark 4 h pls RedLight 1min -0.31 >More info -0.55 >More info Dark 4 h Original data Light treatments
58 Col BTH 0.19 >More info 0.67 >More info Col rosettes Original data GEO bulk
59 T101D 10mM NH4NO3 0.31 >More info 0.55 >More info col 10mM NH4NO3 Root Original data
60 ABA JA 24h 0.23 >More info 0.63 >More info EtOH 24h 24hr Original data GEO bulk
61 root cells columella root cap -Fe -0.57 >More info -0.29 >More info whole roots standard Original data GEO bulk
62 root cells stele -Fe -0.54 >More info -0.31 >More info whole roots standard Original data GEO bulk
63 epiF3 0.53 >More info 0.30 >More info WT Col-0 aerial part Original data
64 ref6-1 -0.28 >More info -0.55 >More info Col whole seedling Original data GEO bulk
65 root protoplasts 40 mM NaCl -0.51 >More info -0.31 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
66 root control pCO2 -0.24 >More info -0.57 >More info root control total control root Original data GEO bulk
67 Cs root 0.16 >More info 0.64 >More info control root Original data GEO bulk
68 Chemically -0.23 >More info -0.57 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
69 ABA SA 24h 0.24 >More info 0.55 >More info EtOH 24h 24hr Original data GEO bulk
70 VND6 0h -0.50 >More info -0.28 >More info wt 0h Original data GEO bulk
71 35:SUB1C 0.25 >More info 0.53 >More info WT whole seedling Original data GEO bulk
72 IAA7mII over-expressor IAA Treated 0.09 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
73 afb3-1 2h KNO3 -0.55 >More info -0.22 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
74 spx1 spx2 resupplied Pi 4h 0.53 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
75 root epidermis and lateral root cap -S -0.20 >More info -0.57 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
76 myb50 xylem -0.58 >More info -0.18 >More info wt xylem xylem Original data GEO bulk
77 9m.KCl -0.56 >More info -0.20 >More info To. KCl 14 day old Roots Original data GEO bulk
78 bam7 untreated -0.22 >More info -0.54 >More info WT untreated none shoot Original data
79 SCL3 OE 0.52 >More info 0.23 >More info Col-0 whole root Original data GEO bulk
80 phosphate-starved 0.17 >More info 0.58 >More info control shoot tissue Original data GEO bulk
81 tbf1-mock infiltration 0.57 >More info 0.15 >More info WT-mock infiltration water for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
82 root - 04% oxygen - 2h -0.08 >More info -0.64 >More info root - 21% oxygen - 2h Original data GEO bulk
83 root - 01% oxygen - 30min -0.22 >More info -0.50 >More info root - 21% oxygen - 30min Original data GEO bulk
84 rdr6-15 -0.21 >More info -0.51 >More info Col-0 plant inflorescence Original data
85 elevated CO2 high Mg root 0.53 >More info 0.17 >More info atmospheric CO2 high Mg root Root Original data
86 35S:VND7-VP16-GR+CHX 0.20 >More info 0.50 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
87 DUO1 induced 6h -0.14 >More info -0.55 >More info 6hr-not-induced whole plant Original data GEO bulk
88 phyABDE Rc50 -0.18 >More info -0.51 >More info phyABDE Dark red light whole seedling Original data GEO bulk
89 Rose Bengal 0.5 uM -0.53 >More info -0.15 >More info Control RB and PER Rose Bengal Original data
90 IAA/inhibitor A Treated -0.55 >More info -0.12 >More info IAA Treated Original data GEO bulk
91 light-hs 0.51 >More info 0.16 >More info light-control seedling Original data
92 sid2 0.50 >More info 0.16 >More info Col rosettes Original data GEO bulk
93 4x 0.13 >More info 0.53 >More info 2x two week old seedlings Original data
94 seedling 24h after HZE atm-1 -0.54 >More info -0.11 >More info seedling day 2 unirradiated atm-1 24h Original data
95 Col0-PsmES4326-24hpi 0.03 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
96 tga1 tga4 2h KCl 0.12 >More info 0.50 >More info Col 0 2h KCl 5 mM KCl root Original data GEO bulk
97 Col-0 SA 0.55 >More info 0.06 >More info Col-0 water complete seedling Original data
98 Anoxia -0.55 >More info -0.06 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
99 ANAC102 knock-out 0.07 >More info 0.54 >More info Col-0 Original data GEO bulk
100 bZIP TDNA mutant 0.51 >More info 0.09 >More info Col-WT mature pollen Original data GEO bulk
101 ckh2 CK25 -0.04 >More info -0.55 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
102 15m.KCl -0.53 >More info -0.05 >More info To. KCl 14 day old Roots Original data GEO bulk
103 Whole root - S 48H 0.06 >More info -0.64 >More info Whole root - S 0H Original data GEO bulk
104 SHR-GR Time 6H Dex -0.07 >More info -0.50 >More info SHR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
105 seed germinating in countinuous light 24h SL -0.10 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
106 21h-DC3000 hrpA -0.02 >More info -0.53 >More info 21h-DC3000 leaves Original data GEO bulk
107 bri1-116 -0.18 >More info 0.73 >More info Col seedling Original data GEO bulk
108 vtc2 mature somatic embryo -0.54 >More info -0.00 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
109 Inflorescences Trp1 -0.03 >More info -0.51 >More info Inflorescences ler inflorescences Original data GEO bulk
110 CCA1-ox 6am non-polysomal 0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
111 12m.KCl -0.51 >More info -0.01 >More info To. KCl 14 day old Roots Original data GEO bulk
112 Shoot apex inflorescence (after bolting) -0.14 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
113 Whole root - S 24H 0.06 >More info -0.57 >More info Whole root - S 0H Original data GEO bulk
114 15m.KNO3 -0.55 >More info 0.06 >More info To. KNO3 14 day old Roots Original data GEO bulk
115 ACC 0.5 h -0.01 >More info 0.50 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
116 Blue Light 45 min 0.03 >More info -0.51 >More info White Light 45min Original data Light treatments
117 Heat shock optimum -0.17 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
118 low CO2 + light -0.09 >More info 0.57 >More info normal CO2 + light Original data GEO bulk
119 AtMYB30-ox 2-4h Xanthomonas -0.03 >More info 0.51 >More info WT 2-4h Xanthomonas Original data GEO bulk
120 Cs shoot -0.14 >More info 0.60 >More info control shoot Original data GEO bulk
121 IAA 0.5 h -0.51 >More info 0.06 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
122 ms35 silique stage 7 0.10 >More info -0.51 >More info Ler 6.7 anther and filament Original data GEO bulk
123 SA 4mM -0.26 >More info 0.65 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
124 agb1 -ABA LF -0.19 >More info 0.56 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
125 AsAKiin11 T3 0.55 >More info -0.19 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
126 Col-0 SA -0.18 >More info 0.53 >More info Col-0 Original data GEO bulk
127 root cells cortex -Fe -0.59 >More info 0.26 >More info whole roots standard Original data GEO bulk
128 Leafminer damaged seedlings -0.26 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
129 2hr continuous KNO3 ECR cell -0.27 >More info 0.53 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
130 Laer Flg22(Agrobacterium) 2h 0.37 >More info -0.61 >More info Laer Control leaf discs Original data GEO bulk
131 siliques AtHb1 control -0.30 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
132 AsAKiin11 T1 0.45 >More info -0.56 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data