4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Selenate (root)
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List of experiments correlated with "Selenate (root)"  Help Download transcriptome of top 30
Score Experiment Correlation from
Selenate (root)		 Correlation to
Selenate (root)		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Selenate (root) 1.00 >More info 1.00 >More info Ws (root) Original data GEO bulk
2 Root Selenate 1.00 >More info 1.00 >More info Root control 40 micromolar selenate Root Original data GEO bulk
3 FLIGHT TAGESB plate6 ROOTS 0.73 >More info 0.78 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
4 TNT-seedlings 0.63 >More info 0.83 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
5 root protoplasts 40 mM NaCl 0.73 >More info 0.69 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
6 Cycloheximide 3 h 0.72 >More info 0.70 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
7 aba1 hypocotyl 0.66 >More info 0.75 >More info Ler hypocotyl hypocotyl Original data GEO bulk
8 rosette Light Wounded 0.70 >More info 0.71 >More info rosette Light Control Original data GEO bulk
9 AgNO3 3 h 0.64 >More info 0.76 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
10 rosette Dark Wounded 0.71 >More info 0.68 >More info rosette Dark Control Original data GEO bulk
11 inhibitor A Treated 0.70 >More info 0.68 >More info Negative Control Original data GEO bulk
12 WT-Dry 0.67 >More info 0.70 >More info WT-CK dehydration treatment 1h Original data
13 Whole root - S 3H 0.60 >More info 0.77 >More info Whole root - S 0H Original data GEO bulk
14 Leaf wounded 0.62 >More info 0.75 >More info Leaf control vegetative leaf Original data GEO bulk
15 Protoplast Induced 0.59 >More info 0.78 >More info Uninduced Original data GEO bulk
16 9 hr Hypoxia 1 hr recovery Total RNA 0.73 >More info 0.63 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
17 NJ15 0.66 >More info 0.69 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
18 abi1 hypocotyl 0.61 >More info 0.73 >More info Ler hypocotyl hypocotyl Original data GEO bulk
19 inhibitor B Treated 0.64 >More info 0.70 >More info Negative Control Original data GEO bulk
20 WT+H2O2 0.64 >More info 0.69 >More info WT H2O2 Original data GEO bulk
21 WT 3H Cold 0.60 >More info 0.72 >More info WT control Original data GEO bulk
22 chito-octamer 0.63 >More info 0.69 >More info Col Mock Original data GEO bulk
23 seedling -S Exp 0.47 >More info 0.85 >More info seedling FN Exp seedling Original data
24 Light 0.59 >More info 0.72 >More info Control Original data GEO bulk
25 IRP1-OE-Ctrl--root 0.66 >More info 0.65 >More info COL-0-Ctrl--root root Original data
26 WT+chitooctaose 0.59 >More info 0.72 >More info WT+water chitooctaose seedlings Original data GEO bulk
27 max4 hypocotyl 0.66 >More info 0.64 >More info wt hypocotyl hypocotyl Original data GEO bulk
28 chito-tetramer 0.62 >More info 0.67 >More info Col Mock Original data GEO bulk
29 5-Triiodobenzoic acid3 h 0.60 >More info 0.69 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
30 IAA/inhibitor A Treated 0.69 >More info 0.59 >More info IAA Treated Original data GEO bulk
31 WT seedlings MV 0.67 >More info 0.60 >More info WT seedlings control Seedlings Original data GEO bulk
32 Transgenic LEC2GR Seedling 1h Dex 0.62 >More info 0.65 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
33 1h +Pi -0.59 >More info -0.68 >More info 1h -Pi root Original data GEO bulk
34 root Dosed gold 0.68 >More info 0.58 >More info root No gold .125 mM gold 24 h roots Original data
35 0.125 mM gold 24 h 0.68 >More info 0.58 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
36 flu 0.63 >More info 0.62 >More info WT Col Original data GEO bulk
37 9 hr Hypoxia 1 hr recovery IP RNA 0.71 >More info 0.54 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
38 WT 3h -P 0.55 >More info 0.69 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
39 ex2 flu dark 8hours/30 minute light 0.52 >More info 0.72 >More info col dark 8hours/30 minute light Original data GEO bulk
40 root cells columella root cap -Fe 0.71 >More info 0.53 >More info whole roots standard Original data GEO bulk
41 myb61 xylem 0.61 >More info 0.62 >More info wt xylem xylem Original data GEO bulk
42 IAA/inhibitor B Treated 0.53 >More info 0.70 >More info IAA Treated Original data GEO bulk
43 myb61 cork 0.58 >More info 0.65 >More info wt cork cork Original data GEO bulk
44 flu over-tAPX 0.64 >More info 0.59 >More info WT Col Original data GEO bulk
45 root cells endodermis and quiescent center -Fe 0.67 >More info 0.55 >More info whole roots standard Original data GEO bulk
46 bbx24 in Simulated Shade -0.53 >More info -0.68 >More info WT in simulated shade shade seedling Original data
47 P.p 2.5hai 0.59 >More info 0.62 >More info At-Control roots Original data GEO bulk
48 GA 0.58 >More info 0.63 >More info none GA Rosette Original data GEO bulk
49 root cells -Fe 0.69 >More info 0.52 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
50 9m.KCl 0.58 >More info 0.62 >More info To. KCl 14 day old Roots Original data GEO bulk
51 Col-Luc WT 3h antimycin A 0.69 >More info 0.51 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
52 Bur-0-30min IAA 0.60 >More info 0.60 >More info Bur-0h IAA whole plant Original data GEO bulk
53 35S:RPS4 eds1-2 2h -0.47 >More info -0.73 >More info 35S:RPS4 2h leaves Original data
54 Col upon hypoxia 6 hrs 0.62 >More info 0.57 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
55 npr1 sni1 brca2a SA -0.61 >More info -0.58 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
56 hira-root -0.64 >More info -0.54 >More info WT-root root Original data
57 protoplasted roots pH4.6 0.62 >More info 0.56 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
58 Wounding Stress3 h (shoot) 0.62 >More info 0.56 >More info Stress mock 3 h (shoot) Original data Stress treatments
59 oas-a1.1 Cd 24h 0.57 >More info 0.61 >More info Cd 24h root Shoot Original data GEO bulk
60 Roots Cd -0.73 >More info -0.45 >More info Roots control Cd Root Original data GEO bulk
61 bHLH122 ox -0.59 >More info -0.59 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
62 Col-0 wt Hypoxic 0.52 >More info 0.65 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
63 WT chitooctaose 0.54 >More info 0.63 >More info WT water Original data GEO bulk
64 P.p 30hai 0.66 >More info 0.51 >More info At-Control roots Original data GEO bulk
65 12m.KCl 0.52 >More info 0.64 >More info To. KCl 14 day old Roots Original data GEO bulk
66 Col0-PsmES4326-24hpi 0.55 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
67 root cells epidermis and lateral root cap -Fe 0.70 >More info 0.46 >More info whole roots standard Original data GEO bulk
68 P.p 6hai 0.67 >More info 0.48 >More info At-Control roots Original data GEO bulk
69 4C 2h(SOIL) 0.46 >More info 0.69 >More info 4C 0h(SOIL) Original data GEO bulk
70 Leafminer damaged seedlings 0.58 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
71 ein5-1 ski2-3 0.68 >More info 0.46 >More info Col-0 aerial tissue Original data
72 WT 6H Cold 0.60 >More info 0.54 >More info WT control Original data GEO bulk
73 Bur-0-1h IAA 0.62 >More info 0.52 >More info Bur-0h IAA whole plant Original data GEO bulk
74 Mutant axr3-1 (IAA) 0.49 >More info 0.65 >More info Col (IAA) Original data GEO bulk
75 4C 1h 0.47 >More info 0.67 >More info 4C 0h Original data GEO bulk
76 root cells stele -Fe 0.68 >More info 0.45 >More info whole roots standard Original data GEO bulk
77 WT 2-4h Xanthomonas 0.60 >More info 0.53 >More info WT T0 Original data GEO bulk
78 Col-0 low oxygen 0.51 >More info 0.62 >More info Col-0 control low oxygen root Original data GEO bulk
79 anac017-2 AntimycinA 3h -0.64 >More info -0.49 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
80 WT 30μM arsenate 8 hours. 0.65 >More info 0.48 >More info WT control (not supplemented). Original data
81 R. solani AG8 0.54 >More info 0.59 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
82 P.p 10.5hai 0.65 >More info 0.47 >More info At-Control roots Original data GEO bulk
83 seedling 12h after HZE WT 0.60 >More info 0.52 >More info seedling day 1 unirradiated WT 12h Original data
84 Leaf systemic 0.56 >More info 0.56 >More info Leaf control vegetative leaf Original data GEO bulk
85 npr1 sni1 SA 0.64 >More info 0.48 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
86 Rsch 8h 0.47 >More info 0.65 >More info Rsch CA Leaves Original data
87 ex1 flu dark 8hours/30 minute light 0.41 >More info 0.71 >More info col dark 8hours/30 minute light Original data GEO bulk
88 whole roots -Fe 72 hour 0.54 >More info 0.57 >More info whole roots standard Original data GEO bulk
89 Fe starvation 72 h 0.54 >More info 0.57 >More info Control Original data GEO bulk
90 CeO2 germinant -0.51 >More info -0.60 >More info Millipore Water germinant CeO2 seedling Original data
91 Rose Bengal 0.5 uM 0.48 >More info 0.63 >More info Control RB and PER Rose Bengal Original data
92 Seedling KUA1-IOX est 0.56 >More info 0.54 >More info Seedling KUA1-IOX mock Original data
93 seedling 6h after HZE WT 0.62 >More info 0.48 >More info seedling day 1 unirradiated WT 6h Original data
94 plant (tga2-5-6) 4h phytoprostane A1 0.53 >More info 0.57 >More info plant (tga2-5-6) 4h control Original data GEO bulk
95 35S::RSL4 -0.61 >More info -0.49 >More info Col-0 Control root Original data GEO bulk
96 flu dark 8hours/30 minute light 0.38 >More info 0.72 >More info col dark 8hours/30 minute light Original data GEO bulk
97 roottip hypoxia total 0.45 >More info 0.65 >More info roottip control total Original data GEO bulk
98 Tsu-1 -Fe 24h 0.47 >More info 0.63 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
99 Tsu -Fe 24h Roots 0.47 >More info 0.63 >More info Tsu +Fe 24h Roots Original data GEO bulk
100 gun1gun5 far-red pretreated -0.49 >More info -0.61 >More info WT far-red pretreated Original data GEO bulk
101 cdpk6-yfp 0.41 >More info 0.69 >More info Kan seedlings Original data GEO bulk
102 seedlings protease IV 0.55 >More info 0.54 >More info seedlings nontreated control whole seedling Original data
103 oas-a1.1 Cd 18h 0.44 >More info 0.65 >More info Cd 18h root Root Original data GEO bulk
104 Col-0 2HS 0.52 >More info 0.57 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
105 Col-0 37C 0.59 >More info 0.50 >More info Col-0 22C Original data GEO bulk
106 SA 0.52 >More info 0.56 >More info WT mock Whole seedling Original data GEO bulk
107 seedling 24h after Gamma WT 0.54 >More info 0.54 >More info seedling day 2 unirradiated WT 24h Original data
108 (Col-0)+100 uM As 0.48 >More info 0.60 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
109 ani1 T0.5 -0.53 >More info -0.54 >More info WT T0.5 root tissue Original data GEO bulk
110 pepr1-1 Pepr2-3 +Pep2 2h -0.55 >More info -0.52 >More info WT +Pep2 2h Pep2 Original data GEO bulk
111 WT no Pi 0.61 >More info 0.46 >More info WT complete seedlings Original data
112 ataf1-1 mutant Col-0 Bgh inoculated 0.62 >More info 0.45 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
113 15m.KCl 0.55 >More info 0.52 >More info To. KCl 14 day old Roots Original data GEO bulk
114 Heat shock optimum 0.42 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
115 ein2-1 9 hpi A. brassicicola 0.57 >More info 0.50 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
116 CMP 4hr 0.58 >More info 0.49 >More info Acetone 4hr root Original data GEO bulk
117 Bur-0-3h IAA 0.59 >More info 0.48 >More info Bur-0h IAA whole plant Original data GEO bulk
118 CMV-A2b mutant 0.54 >More info 0.52 >More info Mock-At Aerial tissues Original data GEO bulk
119 9 hr Hypoxia Total RNA 0.56 >More info 0.50 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
120 Col-0 DCA 48h 0.50 >More info 0.56 >More info Col-0 MOCK 48h Original data GEO bulk
121 WT AntimycinA 3h 0.62 >More info 0.44 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
122 B.cinerea 18 h infection 0.45 >More info 0.61 >More info Mock 18 h Original data Botrytis cinerea infection
123 Kas-1 -Fe 24h -0.47 >More info -0.59 >More info Kas-1 +Fe 24h roots Original data GEO bulk
124 Kas -Fe 24h Roots -0.47 >More info -0.59 >More info Kas +Fe 24h Roots Original data GEO bulk
125 Botrytis cinerea 18h 0.45 >More info 0.61 >More info control 18h Original data GEO bulk
126 ice1 control 0.62 >More info 0.43 >More info WT control Original data GEO bulk
127 OsSAP11 expressing -0.54 >More info -0.51 >More info WT seedlings Original data GEO bulk
128 WT 90-105 min Xanthomonas 0.53 >More info 0.52 >More info WT T0 Original data GEO bulk
129 seedlings-week-old RECA1-overexpressing
transgenic		 0.53 >More info 0.52 >More info seedlings-week-old Col-0 seedlings Original data
130 WT flg22 2h 0.56 >More info 0.49 >More info WT 0h Leaf tissue Original data GEO bulk
131 vte2 leaves 48h LT 0.52 >More info 0.53 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
132 Col-0-30min IAA 0.54 >More info 0.50 >More info Col-0-0h IAA whole plant Original data GEO bulk
133 Fenclorim 4hr 0.60 >More info 0.44 >More info Acetone 4hr root Original data GEO bulk
134 rli 0.61 >More info 0.43 >More info WT whole plant Original data GEO bulk
135 WT Col-0 Bgh inoculated 0.57 >More info 0.47 >More info WT Col-0 Un-inoculated Original data GEO bulk
136 Chitosan 3h Treatment 0.57 >More info 0.47 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
137 Col 8h 0.51 >More info 0.53 >More info Col CA Leaves Original data
138 Col in Pi deficiency medium 0.41 >More info 0.63 >More info Col in control medium root Original data GEO bulk
139 Infected pft1 leaf 0.51 >More info 0.52 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
140 WT NAA/flg 1h 0.53 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
141 ckh1 CK200 0.55 >More info 0.48 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
142 root hypoxia total 0.50 >More info 0.53 >More info root control total Original data GEO bulk
143 WT-NOCO2 INFECTED 0.61 >More info 0.42 >More info WT-MOCK Original data GEO bulk
144 ahg2-1sid2-2 0.42 >More info 0.61 >More info WT (Col) control Original data GEO bulk
145 pXVE:HA-EDM2-a untreated -0.36 >More info -0.67 >More info Col-0 untreated seedlings Original data GEO bulk
146 LTN008-2 aza-dc 0.60 >More info 0.42 >More info LTN012-2 Mock Original data
147 FHY3p dark+DEX -0.55 >More info -0.47 >More info FHY3p dark+mock Original data GEO bulk
148 toc1-1-57hr 0.49 >More info 0.53 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
149 (Col-0)+200 uM As 0.44 >More info 0.58 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
150 AtLysM RLK1 mutant chitooctaose -0.48 >More info -0.54 >More info WT chitooctaose Original data GEO bulk
151 msh1 albino 0.60 >More info 0.41 >More info WT aerial part Original data GEO bulk
152 Salt Stress 24 h (root) 0.61 >More info 0.40 >More info Stress mock 24 h (root) Original data Stress treatments
153 (Ws-2)+100 uM As 0.43 >More info 0.58 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
154 current injection 0.38 >More info 0.63 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
155 whole roots -Fe 48 hour 0.50 >More info 0.50 >More info whole roots standard Original data GEO bulk
156 Anoxia 0.50 >More info 0.50 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
157 leaf13 0.51 >More info 0.49 >More info unwounded leaves none Original data GEO bulk
158 AtGATA2ox 0.56 >More info 0.44 >More info Col seedling Original data GEO bulk
159 Chemically 0.27 >More info 0.73 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
160 oligomycin 4 h 0.52 >More info 0.47 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
161 axr1 hypocotyl 0.53 >More info 0.46 >More info wt hypocotyl hypocotyl Original data GEO bulk
162 Nicotinamide-81hr 0.52 >More info 0.47 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
163 Col leaf 100mM NaCl 0.57 >More info 0.42 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
164 whole roots 140 mM NaCl 30 minutes 0.58 >More info 0.41 >More info whole roots standard Original data GEO bulk
165 Col leaf 100mM NaCl 0.57 >More info 0.42 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
166 Col 100mM NaCl 0.57 >More info 0.42 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
167 root cells epidermis 140mM NaCl 48 hours 0.50 >More info 0.49 >More info root cells epidermis standard 1 hour root cells epidermis Original data
168 DFPM 0.54 >More info 0.45 >More info control Original data GEO bulk
169 9 hr Hypoxia IP RNA 0.56 >More info 0.42 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
170 Te ozone 0.61 >More info 0.37 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
171 WT resupplied Pi 4h 0.60 >More info 0.38 >More info WT complete seedlings Original data
172 P35S:rGRF3 0.67 >More info 0.31 >More info WS Original data GEO bulk
173 ARR22-ox (t-zeatin 3 h) 0.60 >More info 0.38 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
174 Phytoprostane A1 4 h 0.43 >More info 0.55 >More info Col-0 Original data GEO bulk
175 Laer pretreat GA Flg22 1h 0.27 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
176 OXUPB1-2 elongation zone 0.39 >More info 0.59 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
177 Glyphosate EC50 0.33 >More info 0.65 >More info Carrier (Glyphosate) Original data GEO bulk
178 Kas2 roots 2hr KNO3 nitrogen 0.55 >More info 0.42 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
179 grf1/grf2/grf3 0.55 >More info 0.42 >More info WS Original data GEO bulk
180 cop1 Seedling BL+ABA 0.56 >More info 0.41 >More info WT Seedling BL+ABA Original data GEO bulk
181 A. thaliana-A. lyrata hybrid -0.55 >More info -0.42 >More info A. thaliana mature leaves before flowering Original data GEO bulk
182 GR-REV 120min 0.61 >More info 0.36 >More info Col 120min Original data GEO bulk
183 sid2-2 9 hpi A. brassicicola 0.57 >More info 0.40 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
184 -Sulfate 24 h 0.14 >More info 0.83 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
185 WT flg22 1h 0.47 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
186 CDB1-Knockout -0.37 >More info -0.60 >More info WT Original data GEO bulk
187 GRX-overexpression seedlings MV -0.43 >More info -0.54 >More info WT seedlings MV Seedlings Original data GEO bulk
188 root cells epidermis 140mM NaCl 32 hours 0.45 >More info 0.52 >More info root cells epidermis standard 1 hour root cells epidermis Original data
189 FLIGHT TAGES 2B plate6 HYPOCOTYLS 0.56 >More info 0.40 >More info GROUND CONTROL TAGES 2B plate6 HYPOCOTYLS plant tissue Original data
190 Leafminer locally damaged thaliana seedlings 0.58 >More info 0.38 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
191 Col-0 9 hpi A. brassicicola 0.55 >More info 0.40 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
192 Methyl Jasmonate 0.5 h 0.39 >More info 0.56 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
193 PNO8 3 h 0.40 >More info 0.55 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
194 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.58 >More info 0.37 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
195 Heat and anoxia 0.52 >More info 0.43 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
196 2 hr Hypoxia Total RNA 0.51 >More info 0.44 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
197 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.58 >More info 0.37 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
198 Col-0 ozone 0.58 >More info 0.37 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
199 vtc1 (II) 0.53 >More info 0.42 >More info Col (II) rosette Original data GEO bulk
200 Methyl Jasmonate 1 h 0.44 >More info 0.51 >More info Mock 1 h Original data Basic hormone treatment of seedlings
201 wnk8-2 untreated -0.45 >More info -0.50 >More info Col-0 untreated seedlings Original data GEO bulk
202 AvrRpt2 Col-0 6hpi 0.56 >More info 0.38 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
203 root cells cortex -Fe 0.68 >More info 0.26 >More info whole roots standard Original data GEO bulk
204 bak1-3 +Pep2 10h 0.55 >More info 0.39 >More info WT +Pep2 10h Pep2 Original data GEO bulk
205 cpctry 0.40 >More info 0.54 >More info Col Original data GEO bulk
206 Mutant siz1-3 (Drought) 0.57 >More info 0.37 >More info Col-0 (Drought) Original data GEO bulk
207 siz1-3 drought 0.57 >More info 0.37 >More info Col-0 drought Original data GEO bulk
208 IMI 4mM 0.59 >More info 0.35 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
209 Nicotinamide-57hr 0.58 >More info 0.36 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
210 Mutant axr3-1 0.37 >More info 0.57 >More info Col Original data GEO bulk
211 toc1-1-81hr 0.42 >More info 0.52 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
212 ref6-1 0.41 >More info 0.53 >More info Col whole seedling Original data GEO bulk
213 root longitudinal zone-4 pH 4.6 0.44 >More info 0.50 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
214 NAA 3h 0.44 >More info 0.50 >More info before treatment NAA root Original data GEO bulk
215 opr3 JA 0.5 h 0.33 >More info 0.61 >More info opr3 0 h Original data GEO bulk
216 root cells endodermis 140mM NaCl 48 hours 0.42 >More info 0.52 >More info root cells endodermis standard 1 hour root cells endodermis Original data
217 dcl1-7 0.55 >More info 0.38 >More info Ler Original data GEO bulk
218 MG132 3 h 0.38 >More info 0.55 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
219 miR393 flg22 1h 0.40 >More info 0.53 >More info WT 0h Leaf tissue Original data GEO bulk
220 vte2-1 3d vernalization 0.52 >More info 0.41 >More info WT 3d vernalization Original data GEO bulk
221 COL-0-Fe--root 0.51 >More info 0.42 >More info COL-0-Ctrl--root root Original data
222 coi1-16 ein2 sid2 ctrl -0.57 >More info -0.36 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
223 toc1-1-53hr 0.42 >More info 0.51 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
224 vtc2-1 -0.54 >More info -0.38 >More info Col-0 whole plant Original data GEO bulk
225 Botrytis cinerea 48h 0.53 >More info 0.39 >More info control 48h Original data GEO bulk
226 col-5 hrpA 12h 0.53 >More info 0.39 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
227 wnk8-1 untreated -0.37 >More info -0.55 >More info Col-0 untreated seedlings Original data GEO bulk
228 Te 8h 0.40 >More info 0.52 >More info Te CA Leaves Original data
229 Laer pretreat GA+JA Flg22 0h 0.57 >More info 0.35 >More info Laer pretreat water control leaf discs Original data GEO bulk
230 toc1-1-65hr 0.50 >More info 0.42 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
231 BLM+INA 0.51 >More info 0.41 >More info CK BLM and INA seedling Original data
232 Col-0 6h NAA 0.50 >More info 0.42 >More info Col-0 6h MOCK Original data GEO bulk
233 sid2-avrB-6h 0.42 >More info 0.50 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
234 del1-1 mutant 5d uninfected 0.52 >More info 0.39 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
235 gai Control 0.55 >More info 0.36 >More info Laer Control leaf discs Original data GEO bulk
236 hrpA 7h 0.53 >More info 0.38 >More info Mock 7h hrpA Original data GEO bulk
237 nia1nia2noa1-2 0.55 >More info 0.36 >More info Col-0 whole seedlings Original data GEO bulk
238 CLO 4mM 0.57 >More info 0.34 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
239 Col-0-1h IAA 0.50 >More info 0.41 >More info Col-0-0h IAA whole plant Original data GEO bulk
240 atmospheric CO2 high Mg shoot 0.59 >More info 0.32 >More info atmospheric CO2 normal Mg shoot Shoot Original data
241 abi4-102 (II) 0.56 >More info 0.34 >More info Col (II) rosette Original data GEO bulk
242 HopZ1a treated 0.56 >More info 0.34 >More info col Original data GEO bulk
243 Col-0 under 4 days salt 0.63 >More info 0.27 >More info Col-0 under control 4 days salt treatment rosette Original data
244 col-5 DC3000 12h 0.52 >More info 0.38 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
245 red illumination +lincomycin 0.29 >More info 0.61 >More info red illumination -lincomycin Original data GEO bulk
246 gpa1 -ABA GC -0.34 >More info -0.55 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
247 SCR-GR Time 3H Dex 0.51 >More info 0.38 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
248 dicamba 0.50 >More info 0.39 >More info WT mock whole seedling Original data GEO bulk
249 ahg2-1 0.39 >More info 0.50 >More info WT (Col) control Original data GEO bulk
250 whole roots 140 mM NaCl 1 hour 0.60 >More info 0.29 >More info whole roots standard Original data GEO bulk
251 seedlings +5AC 0.54 >More info 0.34 >More info control seedlings 10-day old whole seedling Original data GEO bulk
252 ckh1 CK0 0.50 >More info 0.38 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
253 shoots bhlh100/101 0uM Fe 0.57 >More info 0.31 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
254 dorn1-1 Root 100 mM ATP 30 min -0.29 >More info -0.59 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
255 CMV-WT 0.51 >More info 0.36 >More info Mock-At Aerial tissues Original data GEO bulk
256 nia1nia2 0.50 >More info 0.37 >More info Col-0 whole seedlings Original data GEO bulk
257 hni9 high nitrogen 0.37 >More info 0.50 >More info WT high nitrogen roots Original data GEO bulk
258 Whole root - S 48H 0.17 >More info 0.70 >More info Whole root - S 0H Original data GEO bulk
259 CT101 ozone 0.52 >More info 0.34 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
260 seedling 24h after HZE WT 0.54 >More info 0.32 >More info seedling day 2 unirradiated WT 24h Original data
261 gai MeJA 1h -0.54 >More info -0.32 >More info Laer MeJA 1h leaf discs Original data GEO bulk
262 GR-REV 30min 0.52 >More info 0.34 >More info Col 30min Original data GEO bulk
263 rcf1-1 cold 0h 0.54 >More info 0.32 >More info WT cold 0h Control seedlings Original data GEO bulk
264 DC3000 24h 0.54 >More info 0.32 >More info Mock 24h DC3000 Original data GEO bulk
265 Col-0-avrB-6h 0.51 >More info 0.35 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
266 Hydrogen Peroxide 500 uM 0.50 >More info 0.36 >More info Control RB and PER Hydrogen Peroxide Original data
267 npr1 sni1 ssn2 SA -0.55 >More info -0.30 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
268 smg7b-1 0.52 >More info 0.33 >More info WT whole plant Original data GEO bulk
269 seedling 1.5h after Gamma WT 0.51 >More info 0.34 >More info seedling day 1 unirradiated WT 1.5h Original data
270 rdr6-15 -0.53 >More info -0.32 >More info Col-0 Original data GEO bulk
271 tbf1-mock infiltration -0.55 >More info -0.30 >More info WT-mock infiltration water for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
272 csn5 (csn5a-2 csn5b) light 0.50 >More info 0.35 >More info WT light Original data GEO bulk
273 Whole root - S 72H 0.25 >More info 0.60 >More info Whole root - S 0H Original data GEO bulk
274 Whole root - S 12H 0.25 >More info 0.60 >More info Whole root - S 0H Original data GEO bulk
275 GST NPP1 4 h (leaf) 0.53 >More info 0.31 >More info Mock 4 h (leaf) Original data Elicitor treatments
276 siliques AtHb1 control 0.32 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
277 WT Root Hypoxia 0.33 >More info 0.51 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
278 bak1-3 +Pep2 2h 0.29 >More info 0.55 >More info WT +Pep2 2h Pep2 Original data GEO bulk
279 irradiated leaf (cmt 5d) 0.60 >More info 0.24 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
280 root - 01% oxygen - 48h 0.21 >More info 0.63 >More info root - 21% oxygen - 48h Original data GEO bulk
281 SOS1 0mM NaCl 0.52 >More info 0.31 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
282 ceh1 mutant 0.52 >More info 0.31 >More info Parent line Original data
283 psad1-1 stn7-1 -0.54 >More info -0.29 >More info Col-0 rosette leaves Original data GEO bulk
284 2hr continuous KNO3 SR cell 0.56 >More info 0.27 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
285 1hr-pH4.5 0.29 >More info 0.54 >More info 1hr-pH6 1hr pH 4.5 roots Original data GEO bulk
286 Nicotinamide-61hr 0.50 >More info 0.32 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
287 2hr transitory KNO3 SR cell 0.53 >More info 0.29 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
288 wrky33 Bc inoculation 14h 0.56 >More info 0.25 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
289 Cold Stress 24 h (root) 0.50 >More info 0.31 >More info Stress mock 24 h (root) Original data Stress treatments
290 P.syringae AvrRpt2 4 h (leaf) 0.26 >More info 0.55 >More info Mock 4 h (leaf) Original data Elicitor treatments
291 GA 120min 0.28 >More info 0.53 >More info CON120 GA 120 min. root tips Original data GEO bulk
292 Ws HS 0.30 >More info 0.51 >More info Ws control heat shocked seedling Original data GEO bulk
293 HARAP aerobic -0.29 >More info -0.52 >More info WT aerobic aerobic Original data GEO bulk
294 Root -Cs 0.29 >More info 0.52 >More info Control-root Original data GEO bulk
295 SCR-GR Time 12H Dex 0.59 >More info 0.22 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
296 downy mildew cotyledons late stage 0.60 >More info 0.21 >More info mock inoculated Cotyledons Original data GEO bulk
297 Oxidative Stress 3 h (root) -0.52 >More info -0.28 >More info Stress mock 3 h (root) Original data Stress treatments
298 toc1-1-61hr 0.52 >More info 0.28 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
299 seedling 24h after Gamma atm-1 0.30 >More info 0.50 >More info seedling day 2 unirradiated atm-1 24h Original data
300 lug3 leaves 0.50 >More info 0.29 >More info WT-leaves matured rosette leaves Original data GEO bulk
301 auxin and brassinazole seedlings 0.55 >More info 0.24 >More info auxin seedlings Original data GEO bulk
302 mutant acs4A (single mutant) -0.56 >More info -0.23 >More info col control (single mutant) Original data GEO bulk
303 HopZ1a treated ulp1c ulp1d 0.54 >More info 0.24 >More info col Original data GEO bulk
304 +1.6 mM Tween 20 1 h. 0.51 >More info 0.27 >More info +distilled water 1 h. Original data GEO bulk
305 coi1-16 ein2 sid2 ozone 0.51 >More info 0.27 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
306 root callus inducing medium 24h -0.52 >More info -0.26 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
307 root epidermis and lateral root cap pH4.6 0.26 >More info 0.52 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
308 Whole root - S 24H 0.17 >More info 0.61 >More info Whole root - S 0H Original data GEO bulk
309 IAA7mII over-expressor IAA Treated 0.09 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
310 myb50 xylem 0.59 >More info 0.18 >More info wt xylem xylem Original data GEO bulk
311 root stele 40 mM NaCls 0.55 >More info 0.22 >More info root stele Original data GEO bulk
312 vtc2 mature somatic embryo 0.50 >More info 0.27 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
313 Shoot -Cs 0.22 >More info 0.55 >More info Control-shoot Original data GEO bulk
314 hst5 0.55 >More info 0.21 >More info Col-0 Original data GEO bulk
315 2hr KCl control SR cell 0.54 >More info 0.22 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
316 -Sulfate 2 h 0.53 >More info 0.23 >More info Mock 2 h (1500uM sulfate) Original data Response to sulfate limitation
317 root callus inducing medium 48 h -0.50 >More info -0.26 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
318 swn-7 -0.60 >More info -0.16 >More info Col whole plant Original data GEO bulk
319 phyB mutant 22C 4hrs -0.21 >More info -0.55 >More info L22-4hrs whole plant excluding roots Original data GEO bulk
320 opr3 OPDA 0.5 h 0.24 >More info 0.52 >More info opr3 0 h Original data GEO bulk
321 35S::PI ap3-3 35S::AP-GR +DEX 0.18 >More info 0.58 >More info 0hr DEX Original data GEO bulk
322 Shoot P recovery 0.57 >More info 0.18 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
323 irradiated leaf (WT 5d) 0.58 >More info 0.17 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
324 Col light-dark EtOH 0.51 >More info 0.24 >More info Col light-dark Mock 2.5% ethanol Original data GEO bulk
325 GST 4 h (leaf) 0.50 >More info 0.25 >More info Mock 4 h (leaf) Original data Elicitor treatments
326 root - 01% oxygen - 2h 0.20 >More info 0.55 >More info root - 21% oxygen - 2h Original data GEO bulk
327 Imidazolinone EC50 0.24 >More info 0.51 >More info Carrier (Imidazolinone) Original data GEO bulk
328 atmyc2 Seedling BL -0.02 >More info -0.73 >More info WT Seedling BL Original data GEO bulk
329 35S::MBF1c 0.50 >More info 0.24 >More info control Original data GEO bulk
330 Ts5 roots 2hr KCl control 0.51 >More info 0.23 >More info Col0 roots 2hr KCl control root Original data GEO bulk
331 ulp1c ulp1d +Pto 0.53 >More info 0.21 >More info ulp1c ulp1d mock Original data GEO bulk
332 hrpA fliC 7h 0.50 >More info 0.24 >More info Mock 7h hrpA fliC Original data GEO bulk
333 root protophloem 40 mM NaCl 0.50 >More info 0.21 >More info root protophloem Original data GEO bulk
334 Cor hrpS 10h 0.52 >More info 0.19 >More info Mock 10h Cor hrpS Original data GEO bulk
335 Nicotinamide-89hr 0.52 >More info 0.17 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
336 FLIGHT TAGESB plate6 SHOOTS 0.56 >More info 0.13 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
337 desiccated mature pollen grains -0.14 >More info -0.54 >More info hydrated pollen grains Original data GEO bulk
338 Total RNA 35S:HF-RPL18 0.18 >More info 0.50 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
339 seed germinating in countinuous light 24h SL 0.00 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
340 Lipopolysaccaride4 h (leaf) 0.51 >More info 0.14 >More info Mock 4 h (leaf) Original data Elicitor treatments
341 bri1-116 -0.08 >More info 0.73 >More info Col seedling Original data GEO bulk
342 Col BTH -0.03 >More info 0.67 >More info Col rosettes Original data GEO bulk
343 ein3 eil1 0.53 >More info 0.10 >More info Col-0 mock Whole seedling Original data GEO bulk
344 IRP1-OE-Fe--shoot 0.52 >More info 0.11 >More info COL-0-Fe--shoot shoot Original data
345 stn7-1 -0.59 >More info -0.03 >More info Col-0 rosette leaves Original data GEO bulk
346 Shoot apex inflorescence (after bolting) -0.04 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
347 root - 01% oxygen - 30min 0.09 >More info 0.52 >More info root - 21% oxygen - 30min Original data GEO bulk
348 cat2-2; 8h switch to ambient CO2 concentrations; 0.11 >More info 0.50 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
349 calcicole ecotype Cal-0 0.53 >More info 0.04 >More info Col-4 1 mM CaCl2 Original data GEO bulk
350 Col-0 HS 0.06 >More info 0.51 >More info Col-0 control heat shocked seedling Original data GEO bulk
351 WT (Col-0) heat shock 0.06 >More info 0.51 >More info WT (Col-0) whole seedling Original data GEO bulk
352 clf-28 -0.55 >More info -0.01 >More info Col whole plant Original data GEO bulk
353 Col-0 24hpi A. brassicicola 0.54 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
354 2hr transitory KNO3 PrR cell 0.59 >More info -0.03 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
355 Red/FR Light45min -0.13 >More info 0.68 >More info FarRed Light 45min Original data Light treatments
356 ptpks2 -0.07 >More info 0.60 >More info Col-WT leaves Original data GEO bulk
357 HairpinZ 4 h (leaf) 0.55 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
358 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
359 2hr continuous KNO3 PrR cell 0.56 >More info -0.05 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
360 dcl2-1 -0.53 >More info 0.04 >More info Col-0 Original data GEO bulk
361 rdr2-1 -0.51 >More info 0.04 >More info Col-0 Original data GEO bulk
362 rdr1-1 -0.55 >More info 0.09 >More info Col-0 Original data GEO bulk
363 SA 4mM 0.56 >More info -0.10 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
364 FLIGHT TAGESB plate 0.62 >More info -0.19 >More info GROUND CONTROL TAGESB plate Original data
365 xyl-grown cell culture- 1h 1mM Suc 0.27 >More info -0.70 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
366 Col PSTDC3000 24h 0.52 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
367 root - 08% oxygen - 30min -0.21 >More info 0.59 >More info root - 21% oxygen - 30min Original data GEO bulk
368 spx1 spx2 resupplied Pi 4h -0.60 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
369 WT NAA 1h 0.52 >More info -0.29 >More info WT 0h Leaf tissue Original data GEO bulk