4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on swn-7
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List of experiments correlated with "swn-7"  Help Download transcriptome of top 30
Score Experiment Correlation from
swn-7		 Correlation to
swn-7		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 swn-7 1.00 >More info 1.00 >More info Col whole plant Original data GEO bulk
2 max3GR24 (1 uM) -0.68 >More info -0.66 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
3 WT NAA 2h 0.60 >More info 0.70 >More info WT 0h Leaf tissue Original data GEO bulk
4 clf-28 0.79 >More info 0.50 >More info Col whole plant Original data GEO bulk
5 Day Time Treatment -0.62 >More info -0.67 >More info Day Time Control 1hr white light pulse aerial rosette Original data
6 dTLEc systemic wounding 0.59 >More info 0.68 >More info wt systemic wounding leaves Original data GEO bulk
7 ein2-1 +elf18 2h -0.63 >More info -0.61 >More info WT +elf18 2h elf18 Original data GEO bulk
8 Night Time Treatment -0.56 >More info -0.66 >More info Night Time Control 1hr white light pulse aerial rosette Original data
9 ein2-1 untreated -0.54 >More info -0.66 >More info WT untreated untreated Original data GEO bulk
10 ein2 1% sucrose 14-day-old -0.48 >More info -0.71 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
11 Shoot dark control 7h 0.49 >More info 0.70 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
12 Mutant nph4-1_arf19-1 (IAA) -0.65 >More info -0.53 >More info Col (IAA) Original data GEO bulk
13 sdg8-2 mutant -0.69 >More info -0.49 >More info wild type leaf Original data GEO bulk
14 Mutant axr3-1 -0.63 >More info -0.52 >More info Col Original data GEO bulk
15 Col-O high light -0.59 >More info -0.56 >More info Col-O bule light Original data GEO bulk
16 essp4/sdg8-5 mutant -0.63 >More info -0.51 >More info wild type leaf Original data GEO bulk
17 Shoot submergence 24h 0.57 >More info 0.57 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
18 mil4 sid2 0.56 >More info 0.55 >More info Col rosettes Original data GEO bulk
19 Mutant nph4-1_arf19-1 -0.48 >More info -0.62 >More info Col Original data GEO bulk
20 WT-Dry -0.42 >More info -0.67 >More info WT-CK dehydration treatment 1h Original data
21 MIL4 ox 0.51 >More info 0.58 >More info Col Original data GEO bulk
22 ein2-1 +Pep2 2h -0.51 >More info -0.57 >More info WT +Pep2 2h Pep2 Original data GEO bulk
23 FarRed Light 45min 0.48 >More info 0.60 >More info White Light 45min Original data Light treatments
24 Bay-0-3h IAA 0.54 >More info 0.53 >More info Bay-0-0h IAA whole plant Original data GEO bulk
25 Mutant nph4-1 -0.54 >More info -0.53 >More info Col Original data GEO bulk
26 AVG 3 h -0.54 >More info -0.53 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
27 seedling 1.5h after HZE atm-1 0.44 >More info 0.63 >More info seedling day 1 unirradiated atm-1 1.5h Original data
28 irradiated leaf (WT 5d) -0.48 >More info -0.59 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
29 gun1-9 control -0.53 >More info -0.53 >More info Col-0 control Original data GEO bulk
30 Mutant iaa5_6_19 -0.51 >More info -0.55 >More info Col Original data GEO bulk
31 Col-0 DCA 48h -0.47 >More info -0.59 >More info Col-0 MOCK 48h Original data GEO bulk
32 ein2-1 24hpi A. brassicicola -0.46 >More info -0.60 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
33 Mutant nph4-1 (IAA) -0.53 >More info -0.52 >More info Col (IAA) Original data GEO bulk
34 cop1 Seedling BL+ABA -0.41 >More info -0.64 >More info WT Seedling BL+ABA Original data GEO bulk
35 seedling 24h after Gamma WT -0.47 >More info -0.58 >More info seedling day 2 unirradiated WT 24h Original data
36 phr1 phl1 Shoot-Pi 0.51 >More info 0.53 >More info WT Shoot-Pi shoots Original data GEO bulk
37 Mutant iaa17-6 -0.45 >More info -0.59 >More info Col Original data GEO bulk
38 WT hypoxia 0.43 >More info 0.60 >More info WT normoxia whole rosette Original data
39 Shoot dark control 24h 0.40 >More info 0.61 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
40 amiR-tor induced 3d -0.42 >More info -0.59 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
41 aba2 1% sucrose 12-day-old 0.69 >More info 0.31 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
42 ein3 eil1 -0.38 >More info -0.62 >More info Col-0 mock Whole seedling Original data GEO bulk
43 ape2 low light 0.49 >More info 0.51 >More info Ws-2 low light Original data GEO bulk
44 Col-0 WT HL 3h -0.40 >More info -0.60 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
45 pXVE:HA-EDM2-a untreated 0.23 >More info 0.76 >More info Col-0 untreated seedlings Original data GEO bulk
46 Whole root - S 12H -0.45 >More info -0.54 >More info Whole root - S 0H Original data GEO bulk
47 OsRLCK253 expressing -0.63 >More info -0.35 >More info WT seedlings Original data GEO bulk
48 WT Shoot-Pi -0.51 >More info -0.47 >More info WT Shoot+Pi shoots Original data GEO bulk
49 B.cinerea 18 h infection -0.44 >More info -0.54 >More info Mock 18 h Original data Botrytis cinerea infection
50 Mutant sav3-2 (WL) -0.42 >More info -0.56 >More info Col-0 (WL) Original data GEO bulk
51 Botrytis cinerea 18h -0.44 >More info -0.54 >More info control 18h Original data GEO bulk
52 sav3-2 light -0.42 >More info -0.56 >More info Col-0 light seedlings Original data GEO bulk
53 albino Ds13-2198-1 0.68 >More info 0.29 >More info control Original data GEO bulk
54 Whole root - S 3H -0.30 >More info -0.67 >More info Whole root - S 0H Original data GEO bulk
55 seedling 24h after Gamma atm-1 -0.36 >More info -0.61 >More info seedling day 2 unirradiated atm-1 24h Original data
56 Hypoxic e1 ate 0.63 >More info 0.33 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
57 aerial organ callus inducing medium 12 h 0.59 >More info 0.36 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
58 Col-0 DCA 6d 0.57 >More info 0.37 >More info Col-0 MOCK 6d Original data GEO bulk
59 tmm1-inflorescence-tips -0.37 >More info -0.55 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
60 Col(gl) leaf 100mM NaCl 0.54 >More info 0.37 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
61 Col(gl) 100mM NaCl 0.54 >More info 0.37 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
62 wnk8-2 untreated 0.17 >More info 0.74 >More info Col-0 untreated seedlings Original data GEO bulk
63 Light 4h steady-state -0.35 >More info -0.56 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
64 CCA14 dark late 0.31 >More info 0.60 >More info Col dark late Original data GEO bulk
65 etr1 1% sucrose 12-day-old -0.36 >More info -0.54 >More info Col-0 1% sucrose 12-day-old Original data GEO bulk
66 Transgenic LEC2GR Seedling 1h Dex -0.21 >More info -0.69 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
67 WT salt 12 h -0.51 >More info -0.38 >More info WT salt 0 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
68 toc1-1-85hr -0.39 >More info -0.50 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
69 pip3 At2g19270 RNAi 24 -0.39 >More info -0.50 >More info Nd-1 whole plant Original data GEO bulk
70 oas-a1.1 root -0.30 >More info -0.59 >More info WT-Untreated Root Original data GEO bulk
71 cop1 Seedling BL -0.30 >More info -0.59 >More info WT Seedling BL Original data GEO bulk
72 TaFLS overexpression line (OE2) 0.56 >More info 0.32 >More info Col-0 Rosette leaves Original data
73 wnk8-1 untreated 0.16 >More info 0.72 >More info Col-0 untreated seedlings Original data GEO bulk
74 sid2 0.54 >More info 0.33 >More info Col rosettes Original data GEO bulk
75 seed germinating in countinuous light 24h SL 0.20 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
76 Col BTH 0.20 >More info 0.67 >More info Col rosettes Original data GEO bulk
77 Dark 6h ivd 0.33 >More info 0.53 >More info 0h ivd Original data
78 Dry pre-dawn -0.33 >More info -0.53 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
79 Light -0.21 >More info -0.65 >More info Control Original data GEO bulk
80 pepr1-1 Pepr2-3 untreated -0.30 >More info -0.55 >More info WT untreated untreated Original data GEO bulk
81 NJ15 -0.34 >More info -0.51 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
82 current injection -0.15 >More info -0.70 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
83 Sha-3h IAA 0.52 >More info 0.32 >More info Sha-0h IAA whole plant Original data GEO bulk
84 WT 1wk -P -0.31 >More info -0.53 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
85 10min Reillumination IP RNA 0.27 >More info 0.57 >More info 1h Dark IP RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
86 COL-0-Fe--shoot -0.52 >More info -0.31 >More info COL-0-Ctrl--shoot shoot Original data
87 lht1 untreated -0.30 >More info -0.53 >More info WT untreated untreated leaf Original data GEO bulk
88 AmGSTF1 expressor 0.29 >More info 0.54 >More info WT leaf tissue Original data GEO bulk
89 IAA7mII over-expressor IAA Treated 0.14 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
90 exo70A1 0.55 >More info 0.27 >More info Col-0 whole plant Original data GEO bulk
91 MYB12OX/tt4 0.59 >More info 0.23 >More info Col-0 aerial part Original data
92 miR mutant (higher order mutant) 0.62 >More info 0.19 >More info col control (higher order mutant) Original data GEO bulk
93 FarRed Light 4 h -0.31 >More info -0.50 >More info White Light 4 h Original data Light treatments
94 gun5 control -0.24 >More info -0.57 >More info Col-0 control Original data GEO bulk
95 leaf blade in FRD 0.50 >More info 0.30 >More info leaf blade in WL leaf blades Original data GEO bulk
96 Wounding Stress3 h (shoot) -0.07 >More info -0.73 >More info Stress mock 3 h (shoot) Original data Stress treatments
97 eto1-4 0.25 >More info 0.55 >More info Col-0 whole seedling Original data GEO bulk
98 Kas-1 -Fe 24h 0.19 >More info 0.61 >More info Kas-1 +Fe 24h roots Original data GEO bulk
99 Kas -Fe 24h Roots 0.19 >More info 0.61 >More info Kas +Fe 24h Roots Original data GEO bulk
100 arr10 arr12 -0.30 >More info -0.50 >More info WT Original data GEO bulk
101 Col(gl) 0mM NaCl 0.75 >More info 0.04 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
102 Col(gl) leaf 0mM NaCl 0.75 >More info 0.04 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
103 Pst-DC3000(avrRpm1)-4hpi -0.16 >More info -0.63 >More info Pst-DC3000-4hpi Original data GEO bulk
104 Laer pretreat GA Flg22 1h 0.07 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
105 JA 3h -0.20 >More info -0.58 >More info EtOH 3h 3hr Original data GEO bulk
106 OsSAP11 expressing -0.74 >More info -0.02 >More info WT seedlings Original data GEO bulk
107 Selenate (root) -0.16 >More info -0.60 >More info Ws (root) Original data GEO bulk
108 Cd 18h root -0.26 >More info -0.50 >More info WT-Untreated Root Original data GEO bulk
109 Root Selenate -0.16 >More info -0.60 >More info Root control 40 micromolar selenate Root Original data GEO bulk
110 npr1 sni1 brca2a -0.70 >More info -0.05 >More info npr1 sni1 water water seedling Original data GEO bulk
111 M6PR transgenic leaf 0mM NaCl 0.76 >More info -0.01 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
112 cca1-lhy before light 0.12 >More info 0.63 >More info before light whole seedlings Original data GEO bulk
113 Leaf systemic -0.19 >More info -0.56 >More info Leaf control vegetative leaf Original data GEO bulk
114 root - 08% oxygen - 30min -0.24 >More info -0.50 >More info root - 21% oxygen - 30min Original data GEO bulk
115 gai MeJA 1h 0.20 >More info 0.53 >More info Laer MeJA 1h leaf discs Original data GEO bulk
116 high-R:FR bud axillary -0.22 >More info -0.51 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
117 46T-CK -0.15 >More info -0.58 >More info WT-CK none Original data
118 shoot control p35S 0.14 >More info 0.58 >More info shoot control total Original data GEO bulk
119 Leaf wounded -0.10 >More info -0.62 >More info Leaf control vegetative leaf Original data GEO bulk
120 abi1 hypocotyl -0.17 >More info -0.54 >More info Ler hypocotyl hypocotyl Original data GEO bulk
121 Col0-PsmES4326-24hpi 0.10 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
122 1h +Pi 0.13 >More info 0.58 >More info 1h -Pi root Original data GEO bulk
123 GA -0.16 >More info -0.54 >More info none GA Rosette Original data GEO bulk
124 Col-0 root drought -0.17 >More info -0.53 >More info Col-0 root water root Original data GEO bulk
125 Leafminer damaged seedlings 0.14 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
126 phyB mutant 16C 4hrs 0.62 >More info 0.08 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
127 control leaf (cmt 5d) -0.58 >More info -0.12 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
128 Dark 40min pls UV-AB 5min -0.20 >More info -0.50 >More info Dark 45 min Original data Light treatments
129 WT 90-105 min Xanthomonas -0.12 >More info -0.58 >More info WT T0 Original data GEO bulk
130 35S::HRE1 Hypoxic 0.59 >More info 0.10 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
131 mkk2 control rep 0.18 >More info 0.51 >More info Col-0 Time 0 rep Original data GEO bulk
132 Col whole leaf 3dpi 0.19 >More info 0.50 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
133 Ler KAR1 24h seed 0.19 >More info 0.50 >More info Ler WATER 24h seed KAR1 seed Original data GEO bulk
134 bri1-116 -0.04 >More info 0.73 >More info Col seedling Original data GEO bulk
135 Light 4h polysome-bound -0.18 >More info -0.51 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
136 IAA 8h 0.55 >More info 0.13 >More info control 8h root Original data GEO bulk
137 dsr1 -0.02 >More info 0.70 >More info WT mock Whole seedling Original data GEO bulk
138 Shoot apex inflorescence (after bolting) 0.02 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
139 Heat shock optimum 0.02 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
140 Shoot submergence 7h 0.66 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
141 iron minus 24h 0.11 >More info 0.55 >More info iron +24h root Original data GEO bulk
142 mil4 0.55 >More info 0.10 >More info Col rosettes Original data GEO bulk
143 1 h Light Total RNA -0.52 >More info -0.13 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
144 Methyl Jasmonate 1 h -0.09 >More info -0.56 >More info Mock 1 h Original data Basic hormone treatment of seedlings
145 wnk8-3 untreated 0.08 >More info 0.57 >More info Col-0 untreated seedlings Original data GEO bulk
146 WOX1-1 0.61 >More info 0.03 >More info Col-0 aerial part Original data
147 Col in Pi deficiency medium -0.06 >More info -0.56 >More info Col in control medium root Original data GEO bulk
148 aox1a:rpoTmp MLD stressed 0.09 >More info 0.53 >More info WT(Col0) MLD stressed (control aox1a:rpoTmp) leaf Original data
149 rosettes drought -0.50 >More info -0.11 >More info rosettes watered Original data GEO bulk
150 24h volatiles Sp. HRO-C48 0.50 >More info 0.11 >More info 24h untreated whole seedling Original data GEO bulk
151 leaf13 -0.09 >More info -0.52 >More info unwounded leaves none Original data GEO bulk
152 root protoplasts 40 mM NaCl -0.05 >More info -0.55 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
153 Red/FR Light45min -0.04 >More info -0.55 >More info FarRed Light 45min Original data Light treatments
154 rosette Dark Wounded -0.04 >More info -0.55 >More info rosette Dark Control Original data GEO bulk
155 TNT-seedlings -0.05 >More info -0.54 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
156 MG132 3 h -0.62 >More info 0.03 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
157 long 17-degree- -0.08 >More info -0.51 >More info control long Original data GEO bulk
158 rgs1+no sugars 0.06 >More info 0.52 >More info WT+no sugars rosette leaves Original data GEO bulk
159 2hr continuous KNO3 EPR cell 0.07 >More info 0.51 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
160 Red/FR Light 4 h 0.08 >More info 0.50 >More info FarRed Light 4 h Original data Light treatments
161 opr3 JA 2 h -0.01 >More info -0.57 >More info opr3 0 h Original data GEO bulk
162 SHR-GR Time 6H Dex -0.52 >More info -0.04 >More info SHR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
163 root - 04% oxygen - 2h -0.02 >More info -0.54 >More info root - 21% oxygen - 2h Original data GEO bulk
164 shoot hypoxia p35S -0.09 >More info 0.64 >More info shoot hypoxia total Original data GEO bulk
165 pab polysome 0.01 >More info -0.55 >More info WT polysome seedling shoot/aerial seedling Original data
166 COL-0-Fe--root -0.50 >More info -0.03 >More info COL-0-Ctrl--root root Original data
167 edr1 96 h powdery mildew 0.52 >More info 0.00 >More info Col-0 96 h powdery mildew Original data GEO bulk
168 shoot hypoxia pRBCS 0.01 >More info 0.51 >More info shoot hypoxia total Original data GEO bulk
169 root longitudinal zone-4 low sulfur 0.52 >More info -0.01 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
170 GRX-overexpression seedlings IAA -0.02 >More info 0.53 >More info WT seedlings IAA Seedlings Original data GEO bulk
171 GA3 0.5 h (ga1) -0.04 >More info 0.54 >More info Mock 0.5 h (ga1) Original data Basic hormone treatment of seedlings
172 21h-DC3000 hrpA -0.05 >More info 0.54 >More info 21h-DC3000 leaves Original data GEO bulk
173 siliques AtHb1 control -0.04 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
174 IXB induced 0.02 >More info -0.50 >More info Methanol IXB Suspension cells Original data GEO bulk
175 GV3101 3hpi -0.03 >More info 0.50 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
176 Red Light 4 h -0.07 >More info 0.53 >More info White Light 4 h Original data Light treatments
177 Mutant sav3-2 (SH) 0.07 >More info -0.53 >More info Col-0 (SH) Original data GEO bulk
178 sav3-2 shade 0.07 >More info -0.53 >More info Col-0 shade seedlings Original data GEO bulk
179 opr3 JA 0.5 h 0.16 >More info -0.62 >More info opr3 0 h Original data GEO bulk
180 SAM SE 35S:AGL15 0.52 >More info -0.07 >More info SAM SE Col Original data GEO bulk
181 root - 08% oxygen - 48h 0.06 >More info -0.51 >More info root - 21% oxygen - 48h Original data GEO bulk
182 fls1-3 0.56 >More info -0.12 >More info Col-0 Rosette leaves Original data
183 irradiated leaf (cmt 5d) 0.13 >More info -0.54 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
184 4C 1h 0.22 >More info -0.61 >More info 4C 0h Original data GEO bulk
185 CCA1-ox 6am non-polysomal -0.13 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
186 ABI3GR +DEX +CHX 0.20 >More info -0.55 >More info ABI3GR -DEX +CHX DEX CHX root/protoplasts Original data GEO bulk
187 Protoplast Induced 0.27 >More info -0.56 >More info Uninduced Original data GEO bulk
188 rosette Light Wounded 0.41 >More info -0.58 >More info rosette Light Control Original data GEO bulk
189 ARR22-ox -0.50 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings