4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on OsSAP11 expressing
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List of experiments correlated with "OsSAP11 expressing"  Help Download transcriptome of top 30
Score Experiment Correlation from
OsSAP11 expressing		 Correlation to
OsSAP11 expressing		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 OsSAP11 expressing 1.00 >More info 1.00 >More info WT seedlings Original data GEO bulk
2 OsRLCK253 expressing 0.90 >More info 0.90 >More info WT seedlings Original data GEO bulk
3 Col(gl) 0mM NaCl -0.77 >More info -0.77 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
4 Col(gl) leaf 0mM NaCl -0.77 >More info -0.77 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
5 M6PR transgenic leaf 0mM NaCl -0.74 >More info -0.78 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
6 1 h Light Total RNA 0.73 >More info 0.78 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
7 Col leaf 100mM NaCl -0.77 >More info -0.72 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
8 Col leaf 100mM NaCl -0.77 >More info -0.72 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
9 Col 100mM NaCl -0.77 >More info -0.72 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
10 1 h Light IP RNA 0.71 >More info 0.76 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
11 Mutant lwd1_lwd2 -0.68 >More info -0.76 >More info Wildtype for phy mutants Original data GEO bulk
12 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 -0.68 >More info -0.76 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
13 Atss3 Light4 0.69 >More info 0.73 >More info Atss3 Dark0.5 Original data GEO bulk
14 ex2 flu dark 8hours/30 minute light -0.70 >More info -0.72 >More info col dark 8hours/30 minute light Original data GEO bulk
15 bHLH122 ox 0.71 >More info 0.71 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
16 aba2 1% sucrose 12-day-old -0.66 >More info -0.73 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
17 M6PR transgenic 0mM NaCl -0.70 >More info -0.61 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
18 SOS1 0mM NaCl -0.73 >More info -0.58 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
19 shoot-10 μM DEX- 6 hr -0.68 >More info -0.63 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
20 flu dark 8hours/30 minute light -0.60 >More info -0.71 >More info col dark 8hours/30 minute light Original data GEO bulk
21 WT 3H Cold -0.54 >More info -0.75 >More info WT control Original data GEO bulk
22 Atss3 Light1 0.60 >More info 0.68 >More info Atss3 Dark0.5 Original data GEO bulk
23 rosette Light Wounded -0.68 >More info -0.60 >More info rosette Light Control Original data GEO bulk
24 3x(p) -0.57 >More info -0.70 >More info 2x two week old seedlings Original data
25 leaf blade in D -0.63 >More info -0.64 >More info leaf blade in WL leaf blades Original data GEO bulk
26 CBF3 0mM NaCl -0.67 >More info -0.59 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
27 4C 2h(SOIL) -0.58 >More info -0.68 >More info 4C 0h(SOIL) Original data GEO bulk
28 flu over-tAPX -0.65 >More info -0.61 >More info WT Col Original data GEO bulk
29 sfr6 drought 0.61 >More info 0.63 >More info WT drought All aerial tissue Original data GEO bulk
30 shoot-10 μM DEX- 24hr -0.62 >More info -0.62 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
31 30m light 0.57 >More info 0.67 >More info before light whole seedlings Original data GEO bulk
32 Col-0 low oxygen -0.73 >More info -0.51 >More info Col-0 Original data GEO bulk
33 WT+chitooctaose -0.61 >More info -0.62 >More info WT+water chitooctaose seedlings Original data GEO bulk
34 WT+H2O2 -0.60 >More info -0.62 >More info WT H2O2 Original data GEO bulk
35 Col-0 2HS -0.61 >More info -0.60 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
36 seedlings protease IV -0.64 >More info -0.57 >More info seedlings nontreated control whole seedling Original data
37 anti-sense for AtAOX1a -0.63 >More info -0.58 >More info WT Original data GEO bulk
38 Protoplast Induced -0.54 >More info -0.67 >More info Uninduced Original data GEO bulk
39 toc1-1-77hr -0.61 >More info -0.59 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
40 abi1 hypocotyl -0.57 >More info -0.63 >More info Ler hypocotyl hypocotyl Original data GEO bulk
41 6h volatiles Sp. HRO-C48 -0.64 >More info -0.55 >More info 6h untreated whole seedling Original data GEO bulk
42 flu -0.62 >More info -0.57 >More info WT Col Original data GEO bulk
43 mbd11 mutant thaliana 10-day-old seedling -0.63 >More info -0.55 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
44 Ws 100mM NaCl -0.63 >More info -0.55 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
45 Ws leaf 100mM NaCl -0.63 >More info -0.55 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
46 rosette Dark Wounded -0.61 >More info -0.57 >More info rosette Dark Control Original data GEO bulk
47 pip3 At2g19270 TDNA 9 -0.55 >More info -0.62 >More info Col-0 whole plant Original data GEO bulk
48 Dark 6h ivd -0.61 >More info -0.55 >More info 0h ivd Original data
49 triploid female excess 0.49 >More info 0.67 >More info tetraploid Original data GEO bulk
50 WT salt 12 h 0.59 >More info 0.57 >More info WT salt 0 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
51 AtLysM RLK1 mutant chitooctaose 0.62 >More info 0.53 >More info WT chitooctaose Original data GEO bulk
52 Nicotinamide-73hr -0.60 >More info -0.55 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
53 Rose Bengal 0.5 uM -0.51 >More info -0.63 >More info Control RB and PER Rose Bengal Original data
54 rcf1-1 cold 24h -0.61 >More info -0.53 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
55 tetraploid -0.55 >More info -0.59 >More info diploid Original data GEO bulk
56 shoot-10 μM DEX- 12 hr -0.57 >More info -0.57 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
57 3x(m) -0.51 >More info -0.62 >More info 2x two week old seedlings Original data
58 petiole in D -0.55 >More info -0.58 >More info petiole in WL petioles Original data GEO bulk
59 npr1 sni1 brca2a SA 0.59 >More info 0.54 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
60 seedling 12h after HZE WT -0.58 >More info -0.54 >More info seedling day 1 unirradiated WT 12h Original data
61 TNT-seedlings -0.54 >More info -0.58 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
62 4C 1h -0.53 >More info -0.59 >More info 4C 0h Original data GEO bulk
63 ebs Pool -0.56 >More info -0.55 >More info Ler Pool seedling Original data GEO bulk
64 sid2-avrB-6h -0.57 >More info -0.54 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
65 FLIGHT TAGESB plate6 ROOTS -0.54 >More info -0.57 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
66 sid2-2 9 hpi A. brassicicola -0.59 >More info -0.52 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
67 Col-Luc WT 3h antimycin A -0.60 >More info -0.51 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
68 pmr5 pmr6 -0.62 >More info -0.48 >More info Col-0 Original data GEO bulk
69 35S:RPS4 eds1-2 2h 0.53 >More info 0.57 >More info 35S:RPS4 2h leaves Original data
70 Col-0 C2H4 24h -0.62 >More info -0.48 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
71 ex1 flu dark 8hours/30 minute light -0.49 >More info -0.61 >More info col dark 8hours/30 minute light Original data GEO bulk
72 WT roots - Fe -0.53 >More info -0.56 >More info WT roots + Fe Roots Original data GEO bulk
73 toc1-1-89hr 0.42 >More info 0.67 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
74 seedling 12h after HZE atm-1 -0.50 >More info -0.59 >More info seedling day 1 unirradiated atm-1 12h Original data
75 WT 6H Cold -0.51 >More info -0.58 >More info WT control Original data GEO bulk
76 ORS1 induced -0.48 >More info -0.60 >More info mock-induced rosette leaves Original data GEO bulk
77 WT drought -0.53 >More info -0.54 >More info WT control All aerial tissue Original data GEO bulk
78 myb61 xylem -0.56 >More info -0.51 >More info wt xylem xylem Original data GEO bulk
79 aba1 hypocotyl -0.51 >More info -0.56 >More info Ler hypocotyl hypocotyl Original data GEO bulk
80 WT AntimycinA 3h -0.60 >More info -0.47 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
81 rGRF -0.38 >More info -0.69 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
82 seedling 6h after HZE WT -0.58 >More info -0.48 >More info seedling day 1 unirradiated WT 6h Original data
83 til1-1 22C -0.60 >More info -0.46 >More info Col-0 22C Original data GEO bulk
84 Shoot dark control 7h -0.47 >More info -0.59 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
85 chito-octamer -0.54 >More info -0.51 >More info Col Mock Original data GEO bulk
86 Selenate (root) -0.51 >More info -0.54 >More info Ws (root) Original data GEO bulk
87 Root Selenate -0.51 >More info -0.54 >More info Root control 40 micromolar selenate Root Original data GEO bulk
88 Wt-BA-sample -0.55 >More info -0.50 >More info Wt-dmso-sample seedling Original data
89 low CO2 + light -0.58 >More info -0.47 >More info normal CO2 + light Original data GEO bulk
90 petiole in FRD -0.57 >More info -0.48 >More info petiole in WL petioles Original data GEO bulk
91 bak1-3 +Pep2 2h -0.50 >More info -0.54 >More info WT +Pep2 2h Pep2 Original data GEO bulk
92 tunicamycin 0.45 >More info 0.59 >More info DMF Original data GEO bulk
93 Col-0 ozone- (control genotype coi1-16 ein2 sid2) -0.61 >More info -0.42 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
94 35S::MBF1c -0.56 >More info -0.47 >More info control Original data GEO bulk
95 gpa1 -ABA LF -0.52 >More info -0.51 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
96 CMV-A2b mutant -0.69 >More info -0.34 >More info Mock-At Aerial tissues Original data GEO bulk
97 coi1-16 ein2 sid2 ctrl 0.63 >More info 0.40 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
98 leaf blade in FRD -0.56 >More info -0.47 >More info leaf blade in WL leaf blades Original data GEO bulk
99 WT Na2S 0.56 >More info 0.46 >More info WT water Na2S leaf Original data GEO bulk
100 Col-0 ozone- (control genotype tga2 tag5 tga6) -0.63 >More info -0.39 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
101 Col-0 ozone -0.61 >More info -0.41 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
102 GA -0.50 >More info -0.52 >More info none GA Rosette Original data GEO bulk
103 Te ozone -0.65 >More info -0.37 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
104 Apex mir-3TCP 14DAS 0.64 >More info 0.38 >More info Apex Col 14DAS Original data GEO bulk
105 oligomycin 1 h -0.62 >More info -0.40 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
106 HARAP aerobic 0.42 >More info 0.60 >More info WT aerobic aerobic Original data GEO bulk
107 chito-tetramer -0.57 >More info -0.44 >More info Col Mock Original data GEO bulk
108 arr-BA-sample 0.53 >More info 0.48 >More info Wt-BA-sample seedling Original data
109 rdr1-1 0.64 >More info 0.37 >More info Col-0 Original data GEO bulk
110 Dark 3day ivd -0.60 >More info -0.41 >More info 0h ivd Original data
111 pmr5 -0.57 >More info -0.44 >More info Col-0 Original data GEO bulk
112 cs26 long day -0.56 >More info -0.45 >More info Leaves-WT-LD leaf Original data GEO bulk
113 mutant acs6E (single mutant) 0.57 >More info 0.44 >More info col control (single mutant) Original data GEO bulk
114 Infected pft1 leaf -0.42 >More info -0.59 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
115 bri1-116 0.28 >More info 0.73 >More info Col seedling Original data GEO bulk
116 TA induced -0.56 >More info -0.44 >More info Methanol TA Suspension cells Original data GEO bulk
117 eds16 whole leaf 7d UI -0.37 >More info -0.63 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
118 CT101 ozone -0.64 >More info -0.35 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
119 AvrRpt2 Col-0 6hpi -0.59 >More info -0.40 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
120 opr3 OPDA 0.5 h -0.50 >More info -0.49 >More info opr3 0 h Original data GEO bulk
121 dde2-2 24hpi A. brassicicola 0.48 >More info 0.51 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
122 2 hr Hypoxia Total RNA -0.55 >More info -0.43 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
123 anac017-2 AntimycinA 3h 0.55 >More info 0.43 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
124 col-5 hrpA 12h -0.52 >More info -0.46 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
125 Nicotinamide-77hr -0.48 >More info -0.50 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
126 Night Time Treatment 0.48 >More info 0.50 >More info Night Time Control 1hr white light pulse aerial rosette Original data
127 Leafminer locally damaged thaliana seedlings -0.54 >More info -0.43 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
128 dde2-2 9 hpi A. brassicicola -0.55 >More info -0.42 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
129 IXB induced -0.50 >More info -0.47 >More info Methanol IXB Suspension cells Original data GEO bulk
130 ein2-1 9 hpi A. brassicicola -0.55 >More info -0.42 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
131 max4 hypocotyl -0.55 >More info -0.42 >More info wt hypocotyl hypocotyl Original data GEO bulk
132 Col-0 9 hpi A. brassicicola -0.54 >More info -0.43 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
133 ERF96OE -0.55 >More info -0.42 >More info WT leaf Original data
134 WT flg22 2h -0.56 >More info -0.41 >More info WT 0h Leaf tissue Original data GEO bulk
135 low CO2 + dark -0.54 >More info -0.43 >More info normal CO2 + light Original data GEO bulk
136 FLIGHT TAGES 2B plate6 HYPOCOTYLS -0.61 >More info -0.36 >More info GROUND CONTROL TAGES 2B plate6 HYPOCOTYLS plant tissue Original data
137 GiantCell Root 0.45 >More info 0.52 >More info Control Root laser captured giant cells Original data GEO bulk
138 Leaf wounded -0.41 >More info -0.56 >More info Leaf control vegetative leaf Original data GEO bulk
139 WT (Col-0) inflorescence drought day 4 -0.56 >More info -0.40 >More info WT (Col-0) inflorescence well-watered day 4 Unopen flower buds Original data GEO bulk
140 WT seedlings MV -0.50 >More info -0.46 >More info WT seedlings control Seedlings Original data GEO bulk
141 +1.6 mM Tween 20 1 h. -0.52 >More info -0.44 >More info +distilled water 1 h. Original data GEO bulk
142 Cd 24h root 0.38 >More info 0.58 >More info WT-Untreated Shoot Original data GEO bulk
143 6h volatiles Sm. R3089 -0.33 >More info -0.63 >More info 6h untreated whole seedling Original data GEO bulk
144 WT 2-4h Xanthomonas -0.42 >More info -0.54 >More info WT T0 Original data GEO bulk
145 P.p 10.5hai -0.55 >More info -0.40 >More info At-Control roots Original data GEO bulk
146 HSP90 Reduced RNAi-A2 -0.56 >More info -0.39 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
147 amiRAP aerobic 0.40 >More info 0.55 >More info WT aerobic aerobic Original data GEO bulk
148 Cycloheximide 3 h -0.53 >More info -0.42 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
149 Nicotinamide-69hr -0.53 >More info -0.42 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
150 coi1-16 ein2 sid2 ozone -0.62 >More info -0.33 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
151 col-5 DC3000 12h -0.50 >More info -0.45 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
152 IMI 4mM -0.53 >More info -0.42 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
153 roottip hypoxia total -0.54 >More info -0.40 >More info roottip control total Original data GEO bulk
154 Col ozone 3h -0.54 >More info -0.40 >More info Col clean-air 3h ozone Original data GEO bulk
155 4d red light grown hmr-5 seedlings -0.54 >More info -0.40 >More info 4d red light grown WT(Col-0) seedlings Original data
156 Seedling-HeatStressed TOTALmRNA -0.50 >More info -0.44 >More info Seedling-control TOTALmRNA seedling Original data
157 ga1-3 SCL3OE 0.53 >More info 0.41 >More info ga1-3 whole root Original data
158 ein2-1 24hpi A. brassicicola 0.41 >More info 0.53 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
159 GST NPP1 4 h (leaf) -0.55 >More info -0.38 >More info Mock 4 h (leaf) Original data Elicitor treatments
160 seedling 1.5h after HZE WT -0.54 >More info -0.39 >More info seedling day 1 unirradiated WT 1.5h Original data
161 15m light 0.53 >More info 0.40 >More info before light whole seedlings Original data GEO bulk
162 vtc2 mature somatic embryo -0.51 >More info -0.42 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
163 phyB mutant 16C 4hrs -0.59 >More info -0.34 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
164 Anoxia -0.43 >More info -0.50 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
165 WT 3h -P -0.41 >More info -0.52 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
166 IRP1-OE-Fe--shoot -0.43 >More info -0.50 >More info COL-0-Fe--shoot shoot Original data
167 whole roots 140 mM NaCl 30 minutes -0.53 >More info -0.39 >More info whole roots standard Original data GEO bulk
168 ataf1-1 mutant Col-0 Bgh inoculated -0.53 >More info -0.39 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
169 GST 4 h (leaf) -0.53 >More info -0.39 >More info Mock 4 h (leaf) Original data Elicitor treatments
170 bio4-1 mutant leaves -0.36 >More info -0.56 >More info WT leaves leaves Original data GEO bulk
171 oligomycin 4 h -0.57 >More info -0.35 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
172 Col-0 under 4 days salt -0.60 >More info -0.32 >More info Col-0 under control 4 days salt treatment rosette Original data
173 FLIGHT TAGESB plate6 SHOOTS -0.61 >More info -0.31 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
174 Shoot submergence 24h -0.42 >More info -0.50 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
175 Flagellin 4 h (leaf) -0.54 >More info -0.37 >More info Mock 4 h (leaf) Original data Elicitor treatments
176 AgNO3 3 h -0.53 >More info -0.38 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
177 Laer Flg22 2h -0.52 >More info -0.39 >More info Laer Control leaf discs Original data GEO bulk
178 root callus inducing medium 96 h 0.53 >More info 0.38 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
179 rcf1-1 cold 0h -0.52 >More info -0.39 >More info WT cold 0h Control seedlings Original data GEO bulk
180 C24 ozone -0.62 >More info -0.29 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
181 axr1 hypocotyl -0.52 >More info -0.38 >More info wt hypocotyl hypocotyl Original data GEO bulk
182 Col-0 low oxygen -0.50 >More info -0.40 >More info Col-0 control low oxygen root Original data GEO bulk
183 gul2-1 bri1-5 mutant -0.52 >More info -0.38 >More info WT 7 day-old whole seedlings Original data
184 Col 8h -0.35 >More info -0.55 >More info Col CA Leaves Original data
185 WT Bc inoculation 14h -0.59 >More info -0.31 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
186 Laer Flg22 1h -0.56 >More info -0.33 >More info Laer Control leaf discs Original data GEO bulk
187 npr1 sni1 SA -0.54 >More info -0.35 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
188 Lipopolysaccaride4 h (leaf) -0.52 >More info -0.37 >More info Mock 4 h (leaf) Original data Elicitor treatments
189 Cd 18h root 0.36 >More info 0.53 >More info WT-Untreated Root Original data GEO bulk
190 ani1 T0.5 0.35 >More info 0.54 >More info WT T0.5 root tissue Original data GEO bulk
191 shl-2 Pool -0.37 >More info -0.52 >More info Ler Pool seedling Original data GEO bulk
192 Col light-dark EtOH -0.54 >More info -0.34 >More info Col light-dark Mock 2.5% ethanol Original data GEO bulk
193 vte1-1 3d vernalization 0.51 >More info 0.37 >More info WT 3d vernalization Original data GEO bulk
194 Dex-rga(delta17) 4h GA4+DEX 0.51 >More info 0.37 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
195 CMP 4hr -0.53 >More info -0.35 >More info Acetone 4hr root Original data GEO bulk
196 C24 24h cold 0.51 >More info 0.37 >More info Col 24h cold leaf Original data GEO bulk
197 root callus inducing medium 48 h 0.53 >More info 0.35 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
198 root callus inducing medium 24h 0.53 >More info 0.35 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
199 WT-Dry -0.36 >More info -0.52 >More info WT-CK dehydration treatment 1h Original data
200 myb50 xylem -0.58 >More info -0.30 >More info wt xylem xylem Original data GEO bulk
201 Nicotinamide-49hr -0.53 >More info -0.34 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
202 9 hr Hypoxia Total RNA -0.55 >More info -0.32 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
203 agb1 -ABA LF -0.33 >More info -0.54 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
204 msh1 albino -0.52 >More info -0.35 >More info WT aerial part Original data GEO bulk
205 P35S:rGRF3 -0.51 >More info -0.36 >More info WS Original data GEO bulk
206 Pseudomonas -0.35 >More info -0.52 >More info Control pseudomonas treated whole seedling Original data GEO bulk
207 1.5 hr ammonium -0.50 >More info -0.36 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
208 Col-0 (t-zeatin 3 h) 0.51 >More info 0.35 >More info Col-0 Original data Cytokinin treatment of seedlings
209 Laer Flg22+GA 2h -0.55 >More info -0.30 >More info Laer Control leaf discs Original data GEO bulk
210 root hypoxia total -0.55 >More info -0.30 >More info root control total Original data GEO bulk
211 Cor hrpS 10h -0.53 >More info -0.32 >More info Mock 10h Cor hrpS Original data GEO bulk
212 noa1-2 -0.55 >More info -0.30 >More info Col-0 whole seedlings Original data GEO bulk
213 Col-0 35S:MBS1 HL 3h 0.57 >More info 0.28 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
214 9 hr Hypoxia IP RNA -0.50 >More info -0.35 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
215 Col whole leaf 6hpi -0.50 >More info -0.35 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
216 Laer pretreat GA+JA Flg22 0h -0.52 >More info -0.32 >More info Laer pretreat water control leaf discs Original data GEO bulk
217 SAM SE 35S:AGL15 -0.56 >More info -0.28 >More info SAM SE Col Original data GEO bulk
218 FLIGHT TAGESB plate -0.67 >More info -0.17 >More info GROUND CONTROL TAGESB plate Original data
219 CLO 4mM -0.57 >More info -0.27 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
220 Fenclorim 4hr -0.50 >More info -0.33 >More info Acetone 4hr root Original data GEO bulk
221 pepr1-1 Pepr2-3 +Pep2 2h 0.54 >More info 0.29 >More info WT +Pep2 2h Pep2 Original data GEO bulk
222 Shoot dark control 24h -0.33 >More info -0.50 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
223 Laer pretreat JA Flg22 1h -0.51 >More info -0.31 >More info Laer pretreat water control leaf discs Original data GEO bulk
224 safener treated -0.52 >More info -0.30 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
225 seedlings-week-old RECA1-overexpressing
transgenic		 -0.50 >More info -0.32 >More info seedlings-week-old Col-0 seedlings Original data
226 atr mock -0.54 >More info -0.28 >More info WT mock shoot apical meristem Original data
227 oas-a1.1 Cd 24h -0.31 >More info -0.51 >More info Cd 24h root Shoot Original data GEO bulk
228 sex1-3 -0.32 >More info -0.50 >More info Col-WT leaves Original data GEO bulk
229 P.p 6hai -0.57 >More info -0.25 >More info At-Control roots Original data GEO bulk
230 Light -0.50 >More info -0.31 >More info Control Original data GEO bulk
231 rosette leaves fdh -0.57 >More info -0.24 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
232 9 hr Hypoxia 1 hr recovery Total RNA -0.50 >More info -0.30 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
233 ago4-1 -0.52 >More info -0.28 >More info WT La-er whole plants Original data GEO bulk
234 phyB mutant 16C 10hrs 0.54 >More info 0.26 >More info 16C 10h whole plant excluding roots Original data GEO bulk
235 gai Control -0.55 >More info -0.25 >More info Laer Control leaf discs Original data GEO bulk
236 Constans-mutant 0.24 >More info 0.56 >More info Col control above-ground whole plant Original data GEO bulk
237 16h Col-0 -0.26 >More info -0.53 >More info 00h Col-0 Original data GEO bulk
238 seedling 24h after HZE WT -0.58 >More info -0.21 >More info seedling day 2 unirradiated WT 24h Original data
239 Infected Col-0 leaf 0.53 >More info 0.24 >More info Mock Col-0 leaf F. oxysporum leaf Original data GEO bulk
240 root protoplasts 40 mM NaCl -0.50 >More info -0.27 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
241 Laer Flg22+GA 1h -0.53 >More info -0.24 >More info Laer Control leaf discs Original data GEO bulk
242 pmr5 -0.53 >More info -0.24 >More info Col-0 rosette Original data GEO bulk
243 ACC 3 h -0.20 >More info -0.57 >More info Mock 3 h Original data Basic hormone treatment of seedlings
244 Kas-1 -Fe 24h 0.26 >More info 0.51 >More info Kas-1 +Fe 24h roots Original data GEO bulk
245 Kas -Fe 24h Roots 0.26 >More info 0.51 >More info Kas +Fe 24h Roots Original data GEO bulk
246 vte2-1 1d vernalization -0.20 >More info -0.57 >More info WT 1d vernalization Original data GEO bulk
247 wrky33 Bc inoculation 14h -0.56 >More info -0.20 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
248 swn-7 -0.02 >More info -0.74 >More info Col whole plant Original data GEO bulk
249 cat2-short-day 4d -0.24 >More info -0.52 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
250 mbd4 mutant thaliana 10-day-old seedling -0.52 >More info -0.23 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
251 rdr2-1 0.60 >More info 0.15 >More info Col-0 Original data GEO bulk
252 dcl2-1 0.58 >More info 0.17 >More info Col-0 Original data GEO bulk
253 mutant acs2B (single mutant) 0.51 >More info 0.23 >More info col control (single mutant) Original data GEO bulk
254 seedling 12h after Gamma atm-1 -0.24 >More info -0.50 >More info seedling day 1 unirradiated atm-1 12h Original data
255 gpa1 +ABA GC 0.17 >More info 0.56 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
256 del1-1 5dpi -0.50 >More info -0.23 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
257 cs26 short-day 0.53 >More info 0.20 >More info Leaves-WT-SD leaf Original data GEO bulk
258 atmyc2 Seedling BL -0.02 >More info 0.75 >More info WT Seedling BL Original data GEO bulk
259 SCR-GR Time 12H Dex -0.55 >More info -0.17 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
260 Shoot apex inflorescence (after bolting) 0.05 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
261 20h Col-0 -0.16 >More info -0.54 >More info 00h Col-0 Original data GEO bulk
262 P. infestans 6 h (leaf) -0.54 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
263 root stele 40 mM NaCls -0.50 >More info -0.19 >More info root stele Original data GEO bulk
264 Col-0-3h IAA -0.50 >More info -0.19 >More info Col-0-0h IAA whole plant Original data GEO bulk
265 35S:VND7-VP16-GR+CHX -0.11 >More info -0.58 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
266 bio4-1 mutant watered00µM biotin leaves 0.18 >More info 0.51 >More info bio4-1 mutant leaves leaves Original data GEO bulk
267 desiccated mature pollen grains 0.11 >More info 0.58 >More info hydrated pollen grains Original data GEO bulk
268 wavy -0.51 >More info -0.16 >More info WT Original data GEO bulk
269 shoots bhlh100/101 100uM Fe -0.55 >More info -0.12 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
270 hst5 -0.52 >More info -0.14 >More info Col-0 Original data GEO bulk
271 myb3 myb3r4d -0.51 >More info -0.15 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
272 Dark 4 h pls RedLight 1min 0.15 >More info 0.51 >More info Dark 4 h Original data Light treatments
273 tmm1-inflorescence-tips 0.11 >More info 0.55 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
274 seed germinating in countinuous light 24h SL -0.01 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
275 cngc19 -0.53 >More info -0.12 >More info Col-0 root Original data GEO bulk
276 cat2-2; 8h switch to ambient CO2 concentrations; -0.02 >More info -0.62 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
277 HairpinZ 4 h (leaf) -0.60 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
278 root Dosed gold -0.52 >More info -0.11 >More info root No gold .125 mM gold 24 h roots Original data
279 0.125 mM gold 24 h -0.52 >More info -0.11 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
280 IAA7mII over-expressor IAA Treated -0.06 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
281 Roots Cd 0.53 >More info 0.09 >More info Roots control Cd Root Original data GEO bulk
282 Col BTH -0.05 >More info 0.67 >More info Col rosettes Original data GEO bulk
283 xyl-grown cell culture- 1h 1mM Fru 0.11 >More info 0.51 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
284 8hr-pH4.5 -0.50 >More info -0.10 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
285 M6PR transgenic 100mM NaCl -0.50 >More info -0.09 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
286 SA 4mM -0.54 >More info -0.03 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
287 Apex BLS>>TCP4 14DAS 0.52 >More info 0.04 >More info Apex Col 14DAS Original data GEO bulk
288 seedling 24h after HZE atm-1 -0.54 >More info -0.02 >More info seedling day 2 unirradiated atm-1 24h Original data
289 siliques WT hypoxia -0.56 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
290 Ibuprofen 3 h 0.06 >More info -0.61 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
291 seedling 3h after HZE WT -0.54 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
292 Shoot submergence 7h -0.51 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
293 Col leaves 120h LT 0.52 >More info -0.01 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
294 MPK6 ox Shoot Hypoxia -0.50 >More info 0.01 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
295 CCA1-ox 6am non-polysomal -0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
296 arr10 arr12 0.54 >More info -0.07 >More info DMSO--WT DMSO roots Original data GEO bulk
297 FarRed Light 45min -0.14 >More info 0.54 >More info White Light 45min Original data Light treatments
298 2hr continuous KNO3 PeR cell 0.27 >More info -0.65 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
299 Whole root - S 24H 0.50 >More info -0.16 >More info Whole root - S 0H Original data GEO bulk
300 light 0.51 >More info -0.18 >More info dark light seedling Original data GEO bulk
301 Laer pretreat GA Flg22 1h -0.41 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
302 siliques AtHb1 control -0.33 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
303 Heat shock optimum -0.55 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
304 Col0-PsmES4326-24hpi -0.52 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
305 Leafminer damaged seedlings -0.54 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk