4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on WT 6H Cold
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List of experiments correlated with "WT 6H Cold"  Help Download transcriptome of top 30
Score Experiment Correlation from
WT 6H Cold		 Correlation to
WT 6H Cold		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 WT 6H Cold 1.00 >More info 1.00 >More info WT control Original data GEO bulk
2 WT 3H Cold 0.86 >More info 0.89 >More info WT control Original data GEO bulk
3 WT 24H Cold 0.84 >More info 0.85 >More info WT control Original data GEO bulk
4 Col 8h 0.81 >More info 0.80 >More info Col CA Leaves Original data
5 WT cold 12 h 0.81 >More info 0.79 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
6 4C 2h(SOIL) 0.70 >More info 0.88 >More info 4C 0h(SOIL) Original data GEO bulk
7 Cold Stress 24 h (shoot) 0.78 >More info 0.80 >More info Stress mock 24 h (shoot) Original data Stress treatments
8 short 8-degree- 0.77 >More info 0.79 >More info control short Original data GEO bulk
9 short 10-degree- 0.77 >More info 0.78 >More info control short Original data GEO bulk
10 Cold Stress 24 h (root) 0.79 >More info 0.75 >More info Stress mock 24 h (root) Original data Stress treatments
11 WT 24h cold 0.74 >More info 0.78 >More info WT warm 24h cold entire aerial part Original data GEO bulk
12 Rsch 8h 0.77 >More info 0.74 >More info Rsch CA Leaves Original data
13 4C 24h(SOIL) 0.71 >More info 0.77 >More info 4C 0h(SOIL) Original data GEO bulk
14 camta1/2 warm -0.76 >More info -0.72 >More info WT 24h cold entire aerial part Original data GEO bulk
15 short 12-degree- 0.72 >More info 0.75 >More info control short Original data GEO bulk
16 WT cold 24h 0.70 >More info 0.77 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
17 Te 8h 0.77 >More info 0.68 >More info Te CA Leaves Original data
18 Col 1d 0.72 >More info 0.73 >More info Col CA Leaves Original data
19 rosette Dark Wounded 0.69 >More info 0.75 >More info rosette Dark Control Original data GEO bulk
20 4C 1h 0.66 >More info 0.78 >More info 4C 0h Original data GEO bulk
21 rosette Light Wounded 0.73 >More info 0.70 >More info rosette Light Control Original data GEO bulk
22 4C 24h 0.69 >More info 0.68 >More info 4C 0h Original data GEO bulk
23 myb61 xylem 0.66 >More info 0.70 >More info wt xylem xylem Original data GEO bulk
24 col 24h4c set4 0.73 >More info 0.62 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
25 CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 cold 0.66 >More info 0.68 >More info CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 12h cold (4C) rosettes Original data GEO bulk
26 Leaf wounded 0.59 >More info 0.74 >More info Leaf control vegetative leaf Original data GEO bulk
27 ws 24h4c q8ws 0.73 >More info 0.58 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
28 dor drought 0.66 >More info 0.65 >More info WT drought Original data GEO bulk
29 WT cold 0.67 >More info 0.64 >More info WT control All aerial tissue Original data GEO bulk
30 ABA 1 h 0.65 >More info 0.65 >More info Mock 1 h Original data Basic hormone treatment of seedlings
31 short 17-degree- 0.62 >More info 0.68 >More info control short Original data GEO bulk
32 WT no Pi 0.73 >More info 0.57 >More info WT complete seedlings Original data
33 Leafminer damaged seedlings 0.73 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
34 4C 7d(SOIL) 0.64 >More info 0.64 >More info 4C 0h(SOIL) Original data GEO bulk
35 1h +Pi -0.66 >More info -0.61 >More info 1h -Pi root Original data GEO bulk
36 npr1 sni1 brca2a SA -0.66 >More info -0.61 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
37 Total RNA csp1 cold 0.67 >More info 0.59 >More info Total RNA csp1 12h cold (4C) rosettes Original data GEO bulk
38 whole roots 140 mM NaCl 30 minutes 0.65 >More info 0.60 >More info whole roots standard Original data GEO bulk
39 WT resupplied Pi 4h 0.69 >More info 0.56 >More info WT complete seedlings Original data
40 Atss3 Dark4 -0.68 >More info -0.57 >More info Atss3 Dark0.5 Original data GEO bulk
41 whole roots 140 mM NaCl 1 hour 0.71 >More info 0.53 >More info whole roots standard Original data GEO bulk
42 Rsch 1d 0.66 >More info 0.58 >More info Rsch CA Leaves Original data
43 Col-O low light -0.70 >More info -0.53 >More info Col-O bule light Original data GEO bulk
44 Cycloheximide 3 h 0.60 >More info 0.63 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
45 Leafminer locally damaged thaliana seedlings 0.73 >More info 0.49 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
46 oas-a1.1 Cd 24h 0.59 >More info 0.63 >More info Cd 24h root Shoot Original data GEO bulk
47 WT-Dry 0.53 >More info 0.69 >More info WT-CK dehydration treatment 1h Original data
48 FLIGHT TAGESB plate6 ROOTS 0.56 >More info 0.65 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
49 myb61 cork 0.54 >More info 0.67 >More info wt cork cork Original data GEO bulk
50 long 8-degree- 0.59 >More info 0.61 >More info control long Original data GEO bulk
51 toc1-1-77hr 0.48 >More info 0.69 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
52 CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold 0.63 >More info 0.53 >More info CSP1 immonoprecipitated RNA 35S:HF-RPL18 12h cold (4C) rosettes Original data GEO bulk
53 WUSp cells 0.67 >More info 0.49 >More info Protoplast Induced Original data GEO bulk
54 short 14-degree- 0.61 >More info 0.55 >More info control short Original data GEO bulk
55 4C 7d 0.60 >More info 0.55 >More info 4C 0h Original data GEO bulk
56 CBF3 0mM NaCl 0.65 >More info 0.50 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
57 wrky72-1-MOCK 0.61 >More info 0.54 >More info WT-MOCK Original data GEO bulk
58 WT+chitooctaose 0.57 >More info 0.58 >More info WT+water chitooctaose seedlings Original data GEO bulk
59 Protoplast Induced 0.52 >More info 0.63 >More info Uninduced Original data GEO bulk
60 Selenate (root) 0.54 >More info 0.60 >More info Ws (root) Original data GEO bulk
61 Root Selenate 0.54 >More info 0.60 >More info Root control 40 micromolar selenate Root Original data GEO bulk
62 seedling 6h after HZE WT 0.69 >More info 0.45 >More info seedling day 1 unirradiated WT 6h Original data
63 Atss3 Dark8 -0.71 >More info -0.43 >More info Atss3 Dark0.5 Original data GEO bulk
64 npr1-3 MOCK 48h -0.45 >More info -0.69 >More info Col-0 MOCK 48h Original data GEO bulk
65 SOS1 0mM NaCl 0.67 >More info 0.46 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
66 35S:RPS4 eds1-2 2h -0.51 >More info -0.62 >More info 35S:RPS4 2h leaves Original data
67 seedling 12h after HZE WT 0.66 >More info 0.47 >More info seedling day 1 unirradiated WT 12h Original data
68 Col-0-30min IAA 0.71 >More info 0.42 >More info Col-0-0h IAA whole plant Original data GEO bulk
69 15m.KCl 0.50 >More info 0.63 >More info To. KCl 14 day old Roots Original data GEO bulk
70 Transgenic LEC2GR Seedling 1h Dex 0.53 >More info 0.59 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
71 OsRLCK253 expressing -0.64 >More info -0.48 >More info WT seedlings Original data GEO bulk
72 WT cold 0.59 >More info 0.53 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
73 Wounding Stress3 h (shoot) 0.58 >More info 0.54 >More info Stress mock 3 h (shoot) Original data Stress treatments
74 chito-tetramer 0.57 >More info 0.54 >More info Col Mock Original data GEO bulk
75 flu over-tAPX 0.58 >More info 0.53 >More info WT Col Original data GEO bulk
76 Laer pretreat GA Flg22 1h 0.40 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
77 hai1-2 low water potential 0.59 >More info 0.51 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
78 Heat and anoxia 0.64 >More info 0.46 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
79 npr1 sni1 SA 0.59 >More info 0.51 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
80 GST 4 h (leaf) 0.55 >More info 0.55 >More info Mock 4 h (leaf) Original data Elicitor treatments
81 bHLH122 ox -0.46 >More info -0.64 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
82 CDB1-Knockout -0.45 >More info -0.65 >More info WT Original data GEO bulk
83 root stele 40 mM NaCls 0.67 >More info 0.42 >More info root stele Original data GEO bulk
84 9 hr Hypoxia 1 hr recovery IP RNA 0.56 >More info 0.53 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
85 arf2 brz -0.65 >More info -0.44 >More info arf2 mock Original data GEO bulk
86 AgNO3 3 h 0.41 >More info 0.68 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
87 OsSAP11 expressing -0.58 >More info -0.51 >More info WT seedlings Original data GEO bulk
88 wrky72-2-MOCK 0.57 >More info 0.51 >More info WT-MOCK Original data GEO bulk
89 max4 hypocotyl 0.56 >More info 0.52 >More info wt hypocotyl hypocotyl Original data GEO bulk
90 axr1 hypocotyl 0.61 >More info 0.46 >More info wt hypocotyl hypocotyl Original data GEO bulk
91 chito-octamer 0.51 >More info 0.56 >More info Col Mock Original data GEO bulk
92 Col-0-3h IAA 0.68 >More info 0.39 >More info Col-0-0h IAA whole plant Original data GEO bulk
93 Col-Luc WT 3h antimycin A 0.53 >More info 0.54 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
94 wt systemic wounding 0.54 >More info 0.53 >More info wt control leaves Original data GEO bulk
95 CBF3 100mM NaCl 0.41 >More info 0.66 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
96 triploid female excess -0.41 >More info -0.66 >More info tetraploid Original data GEO bulk
97 M6PR transgenic 0mM NaCl 0.56 >More info 0.50 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
98 ABA 0.5 h 0.59 >More info 0.47 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
99 leaf13 0.57 >More info 0.49 >More info unwounded leaves none Original data GEO bulk
100 WT chitooctaose 0.50 >More info 0.56 >More info WT water Original data GEO bulk
101 flu 0.55 >More info 0.50 >More info WT Col Original data GEO bulk
102 9 hr Hypoxia 1 hr recovery Total RNA 0.55 >More info 0.50 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
103 root cells endodermis and quiescent center -Fe 0.59 >More info 0.46 >More info whole roots standard Original data GEO bulk
104 35S::CBF2 0.44 >More info 0.61 >More info Ws2 Original data GEO bulk
105 NaCl Col 0.69 >More info 0.36 >More info Col Original data GEO bulk
106 elevated CO2 high Mg shoot -0.70 >More info -0.35 >More info atmospheric CO2 high Mg shoot Shoot Original data
107 WT drought 0.54 >More info 0.50 >More info WT control All aerial tissue Original data GEO bulk
108 Col-0 under 4 days salt 0.63 >More info 0.41 >More info Col-0 under control 4 days salt treatment rosette Original data
109 Col-0-1h IAA 0.66 >More info 0.38 >More info Col-0-0h IAA whole plant Original data GEO bulk
110 AsAKiin11 T3 -0.70 >More info -0.34 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
111 Salt Stress 24 h (root) 0.60 >More info 0.44 >More info Stress mock 24 h (root) Original data Stress treatments
112 Col-0-avrB-6h 0.48 >More info 0.56 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
113 AtLysM RLK1 mutant chitooctaose -0.56 >More info -0.47 >More info WT chitooctaose Original data GEO bulk
114 wnk8-2 untreated -0.45 >More info -0.58 >More info Col-0 untreated seedlings Original data GEO bulk
115 Col0-PsmES4326-24hpi 0.42 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
116 4C 0h 0.47 >More info 0.56 >More info 22C 0h Original data GEO bulk
117 abi1 hypocotyl 0.44 >More info 0.59 >More info Ler hypocotyl hypocotyl Original data GEO bulk
118 long 10-degree- 0.55 >More info 0.47 >More info control long Original data GEO bulk
119 A. thaliana-A. lyrata hybrid -0.58 >More info -0.44 >More info A. thaliana mature leaves before flowering Original data GEO bulk
120 ein5-1 ski2-3 0.48 >More info 0.54 >More info Col-0 aerial tissue Original data
121 Col-0 WT HL 3h 0.57 >More info 0.44 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
122 Bur-0-3h IAA 0.59 >More info 0.42 >More info Bur-0h IAA whole plant Original data GEO bulk
123 LTN008-2 aza-dc 0.53 >More info 0.48 >More info LTN012-2 Mock Original data
124 WT AntimycinA 3h 0.54 >More info 0.47 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
125 root callus inducing medium 24h -0.76 >More info -0.25 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
126 seedlings protease IV 0.48 >More info 0.53 >More info seedlings nontreated control whole seedling Original data
127 ABA 3 h 0.66 >More info 0.34 >More info Mock 3 h Original data Basic hormone treatment of seedlings
128 rosette leaves lcr 0.59 >More info 0.41 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
129 Methyl Jasmonate 1 h 0.59 >More info 0.41 >More info Mock 1 h Original data Basic hormone treatment of seedlings
130 35S::MBF1c 0.45 >More info 0.55 >More info control Original data GEO bulk
131 hst5 0.70 >More info 0.29 >More info Col-0 Original data GEO bulk
132 atmospheric CO2 high Mg shoot 0.62 >More info 0.37 >More info atmospheric CO2 normal Mg shoot Shoot Original data
133 tetraploid 0.58 >More info 0.41 >More info diploid Original data GEO bulk
134 wnk8-1 untreated -0.49 >More info -0.50 >More info Col-0 untreated seedlings Original data GEO bulk
135 toc1-1-53hr 0.38 >More info 0.61 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
136 Mutant lwd1_lwd2 0.65 >More info 0.33 >More info Wildtype for phy mutants Original data GEO bulk
137 spx1 spx2 complete 0.53 >More info 0.45 >More info WT complete seedlings Original data
138 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.65 >More info 0.33 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
139 Col leaf 100mM NaCl 0.51 >More info 0.47 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
140 Col leaf 100mM NaCl 0.51 >More info 0.47 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
141 Col 100mM NaCl 0.51 >More info 0.47 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
142 long 17-degree- 0.31 >More info 0.67 >More info control long Original data GEO bulk
143 Ws 100mM NaCl 0.53 >More info 0.44 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
144 Ws leaf 100mM NaCl 0.53 >More info 0.44 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
145 root cells columella root cap -Fe 0.52 >More info 0.45 >More info whole roots standard Original data GEO bulk
146 col-5 DC3000 12h 0.50 >More info 0.47 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
147 long 12-degree- 0.42 >More info 0.55 >More info control long Original data GEO bulk
148 WT Shoot-Pi 0.61 >More info 0.35 >More info WT Shoot+Pi shoots Original data GEO bulk
149 PRR5-VP 6h light on 0.57 >More info 0.39 >More info WT 6h light on whole plant Original data GEO bulk
150 inhibitor B Treated 0.50 >More info 0.46 >More info Negative Control Original data GEO bulk
151 4C 6h 0.51 >More info 0.45 >More info 22C 3h Original data GEO bulk
152 root callus inducing medium 48 h -0.74 >More info -0.22 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
153 GiantCell Root -0.55 >More info -0.41 >More info Control Root laser captured giant cells Original data GEO bulk
154 Whole root - low pH 1H 0.34 >More info 0.62 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
155 WT+H2O2 0.46 >More info 0.50 >More info WT H2O2 Original data GEO bulk
156 root longitudinal zone-4 NaCl 0.56 >More info 0.39 >More info root longitudinal zone-4 Original data GEO bulk
157 ein2-1 9 hpi A. brassicicola 0.54 >More info 0.41 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
158 CMP 4hr 0.53 >More info 0.42 >More info Acetone 4hr root Original data GEO bulk
159 pXVE:HA-EDM2-a untreated -0.45 >More info -0.50 >More info Col-0 untreated seedlings Original data GEO bulk
160 IXB induced 0.38 >More info 0.56 >More info Methanol IXB Suspension cells Original data GEO bulk
161 root callus inducing medium 12 h -0.72 >More info -0.22 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
162 whole roots 140 mM NaCl 4 hour 0.58 >More info 0.36 >More info whole roots standard Original data GEO bulk
163 gh3.5-1D 48 hpi 0.59 >More info 0.35 >More info Col-0 uninoculated Original data GEO bulk
164 SLWF infested 0.50 >More info 0.44 >More info SLWF uninfested rosette tissue Original data GEO bulk
165 Chitosan 3h Treatment 0.58 >More info 0.36 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
166 SA 4mM 0.36 >More info 0.58 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
167 aba1 hypocotyl 0.44 >More info 0.50 >More info Ler hypocotyl hypocotyl Original data GEO bulk
168 Mutant gh3.5-1D (AvrRpt2) 0.53 >More info 0.40 >More info Col-0 (AvrRpt2) Original data GEO bulk
169 HSP90 Reduced RNAi-A2 0.52 >More info 0.41 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
170 phyABCDE 4-day dark- 2 hours Rc50 0.42 >More info 0.51 >More info phyABCDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
171 pepr1-1 Pepr2-3 +Pep2 2h -0.39 >More info -0.53 >More info WT +Pep2 2h Pep2 Original data GEO bulk
172 AsAKiin11 T1 -0.63 >More info -0.29 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
173 root protoplasts 40 mM NaCl 0.42 >More info 0.50 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
174 Col-0 2HS 0.55 >More info 0.36 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
175 rosette leaves fdh 0.56 >More info 0.35 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
176 Dark 3day ivd 0.52 >More info 0.39 >More info 0h ivd Original data
177 anti-sense for AtAOX1a 0.64 >More info 0.27 >More info WT Original data GEO bulk
178 Heat shock optimum 0.26 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
179 anac017-2 AntimycinA 3h -0.40 >More info -0.51 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
180 lug3 flowers 0.72 >More info 0.19 >More info WT-flowers flowers Original data GEO bulk
181 Apex mir-3TCP 14DAS -0.57 >More info -0.34 >More info Apex Col 14DAS Original data GEO bulk
182 anac017-2 H2O2 3h -0.61 >More info -0.30 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
183 WT (Col-0) inflorescence drought day 4 0.58 >More info 0.33 >More info WT (Col-0) inflorescence well-watered day 4 Unopen flower buds Original data GEO bulk
184 12m.KCl 0.33 >More info 0.58 >More info To. KCl 14 day old Roots Original data GEO bulk
185 opr3 OPDA 0.5 h 0.34 >More info 0.57 >More info opr3 0 h Original data GEO bulk
186 Salt Stress 24 h (shoot) 0.54 >More info 0.36 >More info Stress mock 24 h (shoot) Original data Stress treatments
187 Botrytis cinerea 48h 0.54 >More info 0.36 >More info control 48h Original data GEO bulk
188 35S:RPS4 rrs1-11 T0 0.50 >More info 0.40 >More info 35S:RPS4 T0 leaves Original data
189 HopZ1a treated 0.39 >More info 0.51 >More info col Original data GEO bulk
190 ABA control 0.36 >More info 0.54 >More info No ABA control Original data GEO bulk
191 seedling 6h after HZE atm-1 0.61 >More info 0.29 >More info seedling day 1 unirradiated atm-1 6h Original data
192 Dark 40min pls UV-AB 5min 0.55 >More info 0.34 >More info Dark 45 min Original data Light treatments
193 DC3000 7h 0.50 >More info 0.39 >More info Mock 7h DC3000 Original data GEO bulk
194 rli 0.54 >More info 0.35 >More info WT whole plant Original data GEO bulk
195 Bur-0-30min IAA 0.53 >More info 0.36 >More info Bur-0h IAA whole plant Original data GEO bulk
196 TA induced 0.39 >More info 0.50 >More info Methanol TA Suspension cells Original data GEO bulk
197 gai MeJA 1h -0.53 >More info -0.35 >More info Laer MeJA 1h leaf discs Original data GEO bulk
198 Mutant cry1 (High Light) -0.50 >More info -0.38 >More info Col-0 (High Light) Original data GEO bulk
199 cry1 high light -0.50 >More info -0.38 >More info Col-O high light Original data GEO bulk
200 oas-a1.1 Cd 18h 0.37 >More info 0.51 >More info Cd 18h root Root Original data GEO bulk
201 Cor 10h 0.35 >More info 0.53 >More info Mock 10h Cor Original data GEO bulk
202 Dark 6h ivd 0.58 >More info 0.30 >More info 0h ivd Original data
203 sid2-2 9 hpi A. brassicicola 0.59 >More info 0.28 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
204 root epidermis and lateral root cap 40 mM NaCl 0.50 >More info 0.37 >More info root epidermis and lateral root cap Original data GEO bulk
205 Kas-1 -Fe 24h -0.35 >More info -0.52 >More info Kas-1 +Fe 24h roots Original data GEO bulk
206 Kas -Fe 24h Roots -0.35 >More info -0.52 >More info Kas +Fe 24h Roots Original data GEO bulk
207 rcf1-1 cold 24h 0.54 >More info 0.32 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
208 root callus inducing medium 96 h -0.68 >More info -0.18 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
209 pistil 0.5HAP 0.50 >More info 0.36 >More info unpollinated pistil pistil Original data GEO bulk
210 BI-1-3h IAA 0.60 >More info 0.26 >More info BI-1-0h IAA whole plant Original data GEO bulk
211 root protophloem 40 mM NaCl 0.51 >More info 0.35 >More info root protophloem Original data GEO bulk
212 hai1-2 0.58 >More info 0.28 >More info control control whole seedlings Original data GEO bulk
213 rao2 H2O2 3h -0.50 >More info -0.36 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
214 16C 10h 0.36 >More info 0.50 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
215 opr3 JA 0.5 h 0.27 >More info 0.59 >More info opr3 0 h Original data GEO bulk
216 Compost 0.52 >More info 0.33 >More info Perlite Compost Original data GEO bulk
217 HARAP aerobic -0.32 >More info -0.53 >More info WT aerobic aerobic Original data GEO bulk
218 GA 0.31 >More info 0.54 >More info none GA Rosette Original data GEO bulk
219 Leaf systemic 0.33 >More info 0.52 >More info Leaf control vegetative leaf Original data GEO bulk
220 Whole root - low pH 3H 0.28 >More info 0.57 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
221 triplod male excess -0.50 >More info -0.34 >More info tetraploid Original data GEO bulk
222 aox1a(line) MLD stressed 0.53 >More info 0.31 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
223 seedling 24h after HZE WT 0.57 >More info 0.27 >More info seedling day 2 unirradiated WT 24h Original data
224 elevated CO2 low Mg root -0.69 >More info -0.14 >More info atmospheric CO2 low Mg root Root Original data
225 seedlings by volatiles from leafminer damaged
Lima bean 24h		 -0.23 >More info -0.60 >More info seedlings by volatiles from healthy Lima bean 24h leaves Original data GEO bulk
226 php 0.68 >More info 0.13 >More info WT Original data GEO bulk
227 RGA-GR-DEX 0.31 >More info 0.50 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
228 dorn1-1 Root 100 mM ATP 30 min -0.26 >More info -0.55 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
229 Laer MeJA 1h 0.53 >More info 0.27 >More info Laer Control leaf discs Original data GEO bulk
230 shoot-10 μM DEX- 3 hr 0.59 >More info 0.21 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
231 rdr6-15 -0.59 >More info -0.21 >More info Col-0 Original data GEO bulk
232 stn7-1 -0.52 >More info -0.26 >More info Col-0 rosette leaves Original data GEO bulk
233 msh1 albino 0.54 >More info 0.24 >More info WT aerial part Original data GEO bulk
234 seedling 12h after HZE atm-1 0.51 >More info 0.27 >More info seedling day 1 unirradiated atm-1 12h Original data
235 atr zebularine 0.53 >More info 0.25 >More info WT zebularine shoot apical meristem Original data
236 rosette leaves bdg 0.25 >More info 0.53 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
237 phr1 Root-Pi 0.50 >More info 0.27 >More info WT Root+Pi roots Original data GEO bulk
238 M6PR transgenic 100mM NaCl 0.59 >More info 0.18 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
239 arr-dmso-sample 0.62 >More info 0.14 >More info Wt-dmso-sample seedling Original data
240 root cells cortex -Fe 0.50 >More info 0.26 >More info whole roots standard Original data GEO bulk
241 WT Na2S -0.51 >More info -0.25 >More info WT water Na2S leaf Original data GEO bulk
242 Differentiation 36h -0.54 >More info -0.22 >More info Differentiation 0h leaves Original data
243 penta Pst DC3000 12hpi 0.51 >More info 0.25 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
244 Differentiation 48h -0.54 >More info -0.22 >More info Differentiation 0h leaves Original data
245 Differentiation 24h -0.53 >More info -0.23 >More info Differentiation 0h leaves Original data
246 Dark 2day hml 0.53 >More info 0.22 >More info 0h hml Original data
247 Dark 6h wt 0.53 >More info 0.22 >More info 0h wt Original data
248 TNT-seedlings 0.10 >More info 0.65 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
249 NaCl wermyb2 0.53 >More info 0.21 >More info NaCl Col Original data GEO bulk
250 C58 6dpi -0.50 >More info -0.24 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
251 downy mildew cotyledons early stage -0.50 >More info -0.24 >More info mock inoculated Cotyledons Original data GEO bulk
252 MYB51 OE -0.51 >More info -0.23 >More info WT for ATR1/MYB51 Original data GEO bulk
253 current injection 0.23 >More info 0.51 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
254 2hr continuous KNO3 ECR cell 0.62 >More info 0.11 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
255 Lipopolysaccaride4 h (leaf) 0.51 >More info 0.22 >More info Mock 4 h (leaf) Original data Elicitor treatments
256 Dark 3day wt 0.52 >More info 0.20 >More info 0h wt Original data
257 Col light-dark EtOH 0.50 >More info 0.22 >More info Col light-dark Mock 2.5% ethanol Original data GEO bulk
258 gpa1-4/agb1-2 clean-air 2d 0.51 >More info 0.21 >More info Col clean-air 2d clean-air Original data GEO bulk
259 vtc2 day 7 induction -0.57 >More info -0.15 >More info WT day 7 induction day 7 induction of somatic embryogenesis Original data GEO bulk
260 ex2 flu dark 8hours/30 minute light 0.10 >More info 0.62 >More info col dark 8hours/30 minute light Original data GEO bulk
261 Col light-light EtOH 0.54 >More info 0.17 >More info Col light-light Mock 2.5% ethanol Original data GEO bulk
262 elevated CO2 normal Mg shoot -0.51 >More info -0.20 >More info atmospheric CO2 normal Mg shoot Shoot Original data
263 2hr transitory KNO3 PrR cell 0.52 >More info 0.19 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
264 rcf1-1 cold 12h 0.62 >More info 0.08 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
265 35S:VND7-VP16-GR+CHX 0.12 >More info 0.58 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
266 camta1-2 0.54 >More info 0.15 >More info Col-0-WT Original data GEO bulk
267 IAA7mII over-expressor IAA Treated 0.00 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
268 gul2-1 bri1-5 mutant 0.54 >More info 0.14 >More info WT 7 day-old whole seedlings Original data
269 aln-1 0.69 >More info -0.01 >More info Col-0 Aerial part of seedlings Original data
270 irradiated leaf (WT 5d) 0.61 >More info 0.07 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
271 rdr1-1 -0.50 >More info -0.17 >More info Col-0 Original data GEO bulk
272 WT (Col-0) inflorescence moderate drought day 4 0.53 >More info 0.14 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
273 flu dark 8hours/30 minute light 0.02 >More info 0.65 >More info col dark 8hours/30 minute light Original data GEO bulk
274 Laer Flg22(Agrobacterium) 2h 0.12 >More info 0.55 >More info Laer Control leaf discs Original data GEO bulk
275 HARAP hypoxic 0.16 >More info 0.51 >More info hypoxic hypoxia Original data GEO bulk
276 Infected Col-0 leaf -0.53 >More info -0.13 >More info Mock Col-0 leaf F. oxysporum leaf Original data GEO bulk
277 toc1-1-73hr 0.12 >More info 0.53 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
278 VND6 0h 0.51 >More info 0.13 >More info wt 0h Original data GEO bulk
279 GO5; 8h switch to ambient CO2 concentrations; 0.12 >More info 0.52 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
280 BI-1-1h IAA 0.50 >More info 0.13 >More info BI-1-0h IAA whole plant Original data GEO bulk
281 myb50 xylem 0.51 >More info 0.11 >More info wt xylem xylem Original data GEO bulk
282 rosettes atx drought 0.51 >More info 0.10 >More info rosettes atx watered Original data GEO bulk
283 Laer Pst DC3000 12hpi -0.50 >More info -0.11 >More info Laer Control leaf discs Original data GEO bulk
284 wrky33 mock 0.58 >More info 0.03 >More info WT mock 14 hour mock control leaves Original data
285 CLV3n cells 0.55 >More info 0.05 >More info Protoplast Induced Original data GEO bulk
286 FLIGHT TAGESB plate 0.58 >More info 0.02 >More info GROUND CONTROL TAGESB plate Original data
287 ex1 flu dark 8hours/30 minute light -0.05 >More info 0.65 >More info col dark 8hours/30 minute light Original data GEO bulk
288 siliques AtHb1 control 0.08 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
289 Col-0 48 hpi 0.51 >More info 0.08 >More info Col-0 uninoculated Original data GEO bulk
290 ga1-3/brm-1 0.50 >More info 0.08 >More info wt shoots Original data GEO bulk
291 rdr2-1 -0.54 >More info -0.03 >More info Col-0 Original data GEO bulk
292 rdr6-15 0.08 >More info -0.65 >More info Col-0 plant inflorescence Original data
293 Red/FR Light45min 0.00 >More info -0.57 >More info FarRed Light 45min Original data Light treatments
294 seedling 3h after HZE WT 0.54 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
295 atmospheric CO2 low Mg root 0.62 >More info -0.06 >More info atmospheric CO2 normal Mg root Root Original data
296 gpa1-4/agb1-2 clean-air 3h 0.01 >More info -0.57 >More info Col clean-air 3h clean-air Original data GEO bulk
297 ALC Toc1 light-light Mock 0.53 >More info -0.01 >More info Col light-light Mock no ethanol Original data GEO bulk
298 seed germinating in countinuous light 24h SL -0.16 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
299 gpa1 +ABA GC 0.51 >More info -0.01 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
300 sid2-1 warm -0.53 >More info 0.05 >More info WT warm entire aerial part Original data GEO bulk
301 phyB mutant 22C 10hrs 0.06 >More info -0.54 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
302 Shoot apex inflorescence (after bolting) -0.18 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
303 Col BTH -0.20 >More info 0.67 >More info Col rosettes Original data GEO bulk
304 Apex octa 18DAS -0.60 >More info 0.13 >More info Apex Col 14DAS Original data GEO bulk
305 CCA1-ox 6am non-polysomal -0.06 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
306 ice1 6H Cold -0.54 >More info 0.10 >More info WT 6H Cold Original data GEO bulk
307 spx1 spx2 resupplied Pi 4h -0.68 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
308 bri1-116 -0.31 >More info 0.73 >More info Col seedling Original data GEO bulk
309 dcl3-1 -0.52 >More info 0.11 >More info Col-0 Original data GEO bulk
310 arr10 arr12 tZ 0.50 >More info -0.10 >More info tZ trans-zeatin roots Original data GEO bulk
311 NJ15 0.60 >More info -0.22 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
312 SA 24h -0.20 >More info 0.57 >More info EtOH 24h 24hr Original data GEO bulk
313 AsAKiin11 T2 -0.55 >More info 0.34 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
314 P.syringae vir 4 h (leaf) 0.60 >More info -0.39 >More info Mock 4 h (leaf) Original data Elicitor treatments
315 pad4-est1b-1-doublemutant 0.53 >More info -0.37 >More info pad4-mutant developed rosette leaves Original data GEO bulk
316 NahG 0.38 >More info -0.54 >More info Col-0 Leaves Original data GEO bulk