4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Dark 6h ivd
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List of experiments correlated with "Dark 6h ivd"  Help Download transcriptome of top 30
Score Experiment Correlation from
Dark 6h ivd		 Correlation to
Dark 6h ivd		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Dark 6h ivd 1.00 >More info 1.00 >More info 0h ivd Original data
2 Dark 6h hml 0.93 >More info 0.86 >More info 0h hml Original data
3 Dark 6h wt 0.92 >More info 0.84 >More info 0h wt Original data
4 Dark 1day ivd 0.87 >More info 0.83 >More info 0h ivd Original data
5 Dark 1day wt 0.86 >More info 0.82 >More info 0h wt Original data
6 Dark 1day hml 0.86 >More info 0.81 >More info 0h hml Original data
7 Dark 3day wt 0.86 >More info 0.81 >More info 0h wt Original data
8 Dark 2day wt 0.84 >More info 0.82 >More info 0h wt Original data
9 Dark 3day hml 0.85 >More info 0.80 >More info 0h hml Original data
10 Dark 3day ivd 0.85 >More info 0.78 >More info 0h ivd Original data
11 Dark 2day hml 0.85 >More info 0.76 >More info 0h hml Original data
12 Shoot dark control 7h 0.76 >More info 0.83 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
13 Shoot dark control 24h 0.73 >More info 0.82 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
14 seedling 1.5h after HZE atm-1 0.71 >More info 0.81 >More info seedling day 1 unirradiated atm-1 1.5h Original data
15 Shoot submergence 24h 0.71 >More info 0.77 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
16 seedling 1.5h after HZE WT 0.68 >More info 0.69 >More info seedling day 1 unirradiated WT 1.5h Original data
17 aerial organ callus inducing medium 12 h 0.63 >More info 0.72 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
18 WT hypoxia 0.61 >More info 0.74 >More info WT normoxia whole rosette Original data
19 low CO2 + dark 0.60 >More info 0.75 >More info normal CO2 + light Original data GEO bulk
20 M6PR transgenic 0mM NaCl 0.62 >More info 0.71 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
21 Col-0 C2H4 24h 0.61 >More info 0.72 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
22 Pseudomonas 0.61 >More info 0.71 >More info Control pseudomonas treated whole seedling Original data GEO bulk
23 4d red light grown hmr-5 seedlings 0.63 >More info 0.68 >More info 4d red light grown WT(Col-0) seedlings Original data
24 Leafminer locally damaged thaliana seedlings 0.62 >More info 0.68 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
25 1 h Light Total RNA -0.59 >More info -0.70 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
26 tt4 0.61 >More info 0.67 >More info Col-0 aerial part Original data
27 OsRLCK253 expressing -0.57 >More info -0.71 >More info WT seedlings Original data GEO bulk
28 camta1-2 0.57 >More info 0.71 >More info Col-0-WT Original data GEO bulk
29 cpr5scv1 0.61 >More info 0.66 >More info WT(COL) Original data GEO bulk
30 Day Time Treatment -0.61 >More info -0.66 >More info Day Time Control 1hr white light pulse aerial rosette Original data
31 sfr2 control -0.63 >More info -0.64 >More info WT control All aerial tissue Original data GEO bulk
32 M6PR transgenic leaf 0mM NaCl 0.57 >More info 0.70 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
33 1 h Light IP RNA -0.53 >More info -0.72 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
34 WT Red light 18h -0.56 >More info -0.68 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
35 low CO2 + light 0.52 >More info 0.72 >More info normal CO2 + light Original data GEO bulk
36 Nicotinamide-73hr 0.64 >More info 0.60 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
37 pap1-D/tt4 0.61 >More info 0.62 >More info Col-0 aerial part Original data
38 MYB12OX/tt4 0.60 >More info 0.63 >More info Col-0 aerial part Original data
39 edr1 36 h powdery mildew 0.55 >More info 0.67 >More info Col-0 36 h powdery mildew Original data GEO bulk
40 WT Na2S -0.50 >More info -0.72 >More info WT water Na2S leaf Original data GEO bulk
41 Atss3 Light4 -0.56 >More info -0.65 >More info Atss3 Dark0.5 Original data GEO bulk
42 atmospheric CO2 low Mg shoot 0.67 >More info 0.54 >More info atmospheric CO2 normal Mg shoot Shoot Original data
43 Atss3 Light1 -0.49 >More info -0.72 >More info Atss3 Dark0.5 Original data GEO bulk
44 Nicotinamide-93hr 0.58 >More info 0.62 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
45 Nicotinamide-49hr 0.60 >More info 0.60 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
46 MIL4 ox 0.63 >More info 0.57 >More info Col Original data GEO bulk
47 WT (Col) glucose -0.48 >More info -0.72 >More info WT (Col) glucose seedlings Original data GEO bulk
48 Col(gl) 0mM NaCl 0.54 >More info 0.65 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
49 Light 4h polysome-bound -0.55 >More info -0.64 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
50 Col(gl) leaf 0mM NaCl 0.54 >More info 0.65 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
51 Nicotinamide-69hr 0.59 >More info 0.60 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
52 aerial organ callus inducing medium 48 h 0.59 >More info 0.60 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
53 vte1-1 3d vernalization -0.54 >More info -0.64 >More info WT 3d vernalization Original data GEO bulk
54 Leafminer damaged seedlings 0.62 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
55 SOS1 0mM NaCl 0.53 >More info 0.65 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
56 Light 4h steady-state -0.54 >More info -0.64 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
57 detached inflorescences 24h 0.56 >More info 0.62 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
58 aerial organ callus inducing medium 96 h 0.56 >More info 0.62 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
59 CBF3 0mM NaCl 0.57 >More info 0.61 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
60 mil4 sid2 0.58 >More info 0.59 >More info Col rosettes Original data GEO bulk
61 sdg8-2 mutant -0.62 >More info -0.55 >More info wild type leaf Original data GEO bulk
62 vtc2 (I) 0.53 >More info 0.63 >More info Col (I) rosette Original data GEO bulk
63 OsSAP11 expressing -0.55 >More info -0.61 >More info WT seedlings Original data GEO bulk
64 Leafminer systemically damaged thaliana seedlings 0.52 >More info 0.64 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
65 cpr5npr1svi1 0.52 >More info 0.63 >More info WT(COL) Original data GEO bulk
66 aerial organ callus inducing medium 24h 0.58 >More info 0.57 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
67 Col0-PsmES4326-24hpi 0.54 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
68 SA 4mM 0.41 >More info 0.74 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
69 CHLM overexpression -0.53 >More info -0.61 >More info Col-0 estr green tissue Original data GEO bulk
70 +1.6 mM Tween 20 1 h. 0.46 >More info 0.68 >More info +distilled water 1 h. Original data GEO bulk
71 mkk1/mkk2 24h BTH rep 0.57 >More info 0.57 >More info Col-0 24h BTH rep Original data GEO bulk
72 ataf1-1 mutant Col-0 Bgh inoculated 0.46 >More info 0.67 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
73 seedling 6h after HZE atm-1 0.45 >More info 0.68 >More info seedling day 1 unirradiated atm-1 6h Original data
74 toc1-1-77hr 0.56 >More info 0.57 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
75 rosette leaves fdh 0.51 >More info 0.62 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
76 RPL18 TuMV inoculated total RNA 0.58 >More info 0.55 >More info mock inoculated total RNA PO Original data GEO bulk
77 Col-0 DEX Shade 0.54 >More info 0.59 >More info Col-0 DEX WL seedlings Original data
78 WOX1-1 0.58 >More info 0.55 >More info Col-0 aerial part Original data
79 Col-0 low oxygen 0.56 >More info 0.56 >More info Col-0 Original data GEO bulk
80 UV Stress 24 h (shoot) 0.49 >More info 0.63 >More info Stress mock 24 h (shoot) Original data Stress treatments
81 cca1-lhy 30m light 0.48 >More info 0.64 >More info 30m light whole seedlings Original data GEO bulk
82 Root submergence 7h 0.49 >More info 0.63 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
83 col-5 DC3000 12h 0.47 >More info 0.65 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
84 Col-0 9 hpi A. brassicicola 0.46 >More info 0.66 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
85 max3GR24 (1 uM) -0.56 >More info -0.55 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
86 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.61 >More info 0.50 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
87 COL-0-Fe--shoot -0.61 >More info -0.50 >More info COL-0-Ctrl--shoot shoot Original data
88 Laer pretreat GA Flg22 1h 0.40 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
89 sex1-3 0.37 >More info 0.74 >More info Col-WT leaves Original data GEO bulk
90 seedlings protease IV 0.53 >More info 0.57 >More info seedlings nontreated control whole seedling Original data
91 Col-0 INA 6d 0.58 >More info 0.52 >More info Col-0 MOCK 6d Original data GEO bulk
92 sfr6 control -0.58 >More info -0.52 >More info WT control All aerial tissue Original data GEO bulk
93 Cold Stress 24 h (shoot) 0.49 >More info 0.61 >More info Stress mock 24 h (shoot) Original data Stress treatments
94 Root dark control 7h 0.49 >More info 0.61 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
95 Heat shock optimum 0.45 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
96 edr1 18 h powdery mildew 0.49 >More info 0.61 >More info Col-0 18 h powdery mildew Original data GEO bulk
97 WT AntimycinA 3h 0.48 >More info 0.62 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
98 3x(p) 0.42 >More info 0.68 >More info 2x two week old seedlings Original data
99 seedling 24h after Gamma atm-1 -0.44 >More info -0.66 >More info seedling day 2 unirradiated atm-1 24h Original data
100 CT101 ozone 0.58 >More info 0.51 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
101 abi4 vtc2 (I) 0.49 >More info 0.60 >More info Col (I) rosette Original data GEO bulk
102 wrky33 Bc inoculation 14h 0.58 >More info 0.50 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
103 WT Bc inoculation 14h 0.56 >More info 0.52 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
104 hepta mutant (higher order mutant) 0.57 >More info 0.51 >More info col control (higher order mutant) Original data GEO bulk
105 MIL4 ox BTH 0.55 >More info 0.53 >More info Col BTH Original data GEO bulk
106 ced1 -0.51 >More info -0.57 >More info WT PEG 6hr seedlings Original data GEO bulk
107 GST 4 h (leaf) 0.39 >More info 0.69 >More info Mock 4 h (leaf) Original data Elicitor treatments
108 pif4pif5 mut 1h FR -0.43 >More info -0.65 >More info WT 1h FR Original data GEO bulk
109 Col-0 +lincomycin 0.46 >More info 0.62 >More info Col-0 -lincomycin Original data GEO bulk
110 col-5 hrpA 12h 0.45 >More info 0.63 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
111 seedling 6h after HZE WT 0.48 >More info 0.60 >More info seedling day 1 unirradiated WT 6h Original data
112 mkk1/mkk2 control rep 0.53 >More info 0.54 >More info Col-0 Time 0 rep Original data GEO bulk
113 leaf blade in D 0.44 >More info 0.63 >More info leaf blade in WL leaf blades Original data GEO bulk
114 Cd 18h root -0.46 >More info -0.61 >More info WT-Untreated Root Original data GEO bulk
115 pepr1-1 Pepr2-3 +Pep2 2h -0.46 >More info -0.61 >More info WT +Pep2 2h Pep2 Original data GEO bulk
116 flu over-tAPX 0.48 >More info 0.59 >More info WT Col Original data GEO bulk
117 4h decapitation -0.36 >More info -0.71 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
118 Osmotic Stress 24 h (shoot) 0.52 >More info 0.54 >More info Stress mock 24 h (shoot) Original data Stress treatments
119 petiole in FRD 0.49 >More info 0.57 >More info petiole in WL petioles Original data GEO bulk
120 ptpks2 -0.43 >More info -0.63 >More info Col-WT leaves Original data GEO bulk
121 camta1/2/3 warm 0.49 >More info 0.57 >More info WT warm entire aerial part Original data GEO bulk
122 Te ozone 0.55 >More info 0.50 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
123 OH1 0.53 >More info 0.52 >More info Col-0 leaves Original data GEO bulk
124 Dark 4 h pls RedLight 1min -0.46 >More info -0.59 >More info Dark 4 h Original data Light treatments
125 RGA-GR-DEX 0.46 >More info 0.59 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
126 Apex mir-3TCP 14DAS -0.46 >More info -0.59 >More info Apex Col 14DAS Original data GEO bulk
127 Root submergence 24h 0.46 >More info 0.59 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
128 6h volatiles Sm. R3089 0.37 >More info 0.68 >More info 6h untreated whole seedling Original data GEO bulk
129 Col BTH 0.38 >More info 0.67 >More info Col rosettes Original data GEO bulk
130 Root dark control 24h 0.47 >More info 0.58 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
131 35S:RPS4 eds1-2 24h -0.48 >More info -0.57 >More info 35S:RPS4 24h leaves Original data
132 pap1-D 0.52 >More info 0.52 >More info Col-0 aerial part Original data
133 gh3.5-1D 48 hpi 0.55 >More info 0.49 >More info Col-0 uninoculated Original data GEO bulk
134 CAX1/CAX3 mutant 0.55 >More info 0.49 >More info Col whole plant Original data GEO bulk
135 Col whole leaf 5dpi 0.44 >More info 0.60 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
136 abi4-102 (I) 0.44 >More info 0.60 >More info Col (I) rosette Original data GEO bulk
137 35SpBVR3 0.45 >More info 0.59 >More info WT Original data GEO bulk
138 Night Time Treatment -0.48 >More info -0.56 >More info Night Time Control 1hr white light pulse aerial rosette Original data
139 seedlings-week-old RECA1-overexpressing
transgenic		 0.43 >More info 0.61 >More info seedlings-week-old Col-0 seedlings Original data
140 sid2 0.54 >More info 0.49 >More info Col rosettes Original data GEO bulk
141 Ws 100mM NaCl 0.50 >More info 0.53 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
142 mutant acs9B (single mutant) 0.52 >More info 0.51 >More info col control (single mutant) Original data GEO bulk
143 Ws leaf 100mM NaCl 0.50 >More info 0.53 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
144 essp3/brm5 mutant -0.52 >More info -0.51 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
145 toc1-1-53hr 0.47 >More info 0.56 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
146 Nicotinamide-65hr 0.48 >More info 0.55 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
147 seedling 24h after Gamma WT -0.42 >More info -0.61 >More info seedling day 2 unirradiated WT 24h Original data
148 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.55 >More info 0.47 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
149 Col-0 DCA 6d 0.64 >More info 0.38 >More info Col-0 MOCK 6d Original data GEO bulk
150 ceh1 mutant 0.56 >More info 0.46 >More info Parent line Original data
151 Col-0 ozone 0.55 >More info 0.47 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
152 coi1-16 ein2 sid2 ctrl -0.55 >More info -0.47 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
153 Drought Stress 24 h (shoot) 0.49 >More info 0.53 >More info Stress mock 24 h (shoot) Original data Stress treatments
154 pad4-PsmES4326-24hpi -0.47 >More info -0.55 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
155 CMV-WT 0.47 >More info 0.55 >More info Mock-At Aerial tissues Original data GEO bulk
156 tetraploid 0.38 >More info 0.64 >More info diploid Original data GEO bulk
157 WT +elf18 10h 0.50 >More info 0.51 >More info WT untreated elf18 Original data GEO bulk
158 gai Flg22 2h 0.55 >More info 0.46 >More info Laer Flg22 2h leaf discs Original data GEO bulk
159 GST NPP1 4 h (leaf) 0.42 >More info 0.59 >More info Mock 4 h (leaf) Original data Elicitor treatments
160 mkk2 24h BTH rep 0.42 >More info 0.59 >More info Col-0 24h BTH rep Original data GEO bulk
161 Col leaf 100mM NaCl 0.47 >More info 0.54 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
162 Col leaf 100mM NaCl 0.47 >More info 0.54 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
163 oas-a1.1 root -0.40 >More info -0.61 >More info WT-Untreated Root Original data GEO bulk
164 Col 100mM NaCl 0.47 >More info 0.54 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
165 CMP 24hr 0.47 >More info 0.54 >More info Acetone 24hr root Original data GEO bulk
166 TNT-seedlings 0.27 >More info 0.73 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
167 cca1-lhy 60m light 0.38 >More info 0.62 >More info 60m light whole seedlings Original data GEO bulk
168 30m light -0.37 >More info -0.63 >More info before light whole seedlings Original data GEO bulk
169 WT cold 0.47 >More info 0.53 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
170 cpr5npr1 0.46 >More info 0.54 >More info WT(COL) Original data GEO bulk
171 gun1-1 +lincomycin -0.41 >More info -0.59 >More info Col-0 +lincomycin Original data GEO bulk
172 mil4 BTH 0.46 >More info 0.54 >More info Col BTH rosettes Original data GEO bulk
173 Atss3 Dark8 -0.40 >More info -0.59 >More info Atss3 Dark0.5 Original data GEO bulk
174 leaf blade in FRD 0.40 >More info 0.59 >More info leaf blade in WL leaf blades Original data GEO bulk
175 D2O 0.46 >More info 0.53 >More info H2O seedling Original data GEO bulk
176 CMP 4hr 0.44 >More info 0.55 >More info Acetone 4hr root Original data GEO bulk
177 anac017-2 AntimycinA 3h -0.40 >More info -0.59 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
178 cngc4 0.40 >More info 0.59 >More info Ws-2 Seedlings Original data GEO bulk
179 WT light -0.44 >More info -0.55 >More info WT dark Original data GEO bulk
180 pmr5 pmr6 0.45 >More info 0.54 >More info Col-0 Original data GEO bulk
181 ein2-1 9 hpi A. brassicicola 0.40 >More info 0.59 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
182 petiole in D 0.44 >More info 0.54 >More info petiole in WL petioles Original data GEO bulk
183 pip3 At2g19270 RNAi 24 -0.39 >More info -0.59 >More info Nd-1 whole plant Original data GEO bulk
184 wavy 0.42 >More info 0.56 >More info WT Original data GEO bulk
185 WT (Col-0) inflorescence drought day 5 0.48 >More info 0.50 >More info WT (Col-0) inflorescence well-watered day 5 Unopen flower buds Original data GEO bulk
186 ein2-1 24hpi A. brassicicola -0.36 >More info -0.62 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
187 shoot-10 μM DEX- 6 hr 0.41 >More info 0.57 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
188 Col-0 Mock Shade 0.51 >More info 0.46 >More info Col-0 Mock WL seedlings Original data
189 gai Flg22 1h 0.52 >More info 0.45 >More info Laer Flg22 1h leaf discs Original data GEO bulk
190 C24 ozone 0.52 >More info 0.45 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
191 aba2 1% sucrose 12-day-old 0.56 >More info 0.41 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
192 Dark 4 h pls UV-A 5 min -0.42 >More info -0.55 >More info Dark 4 h Original data Light treatments
193 Flagellin 4 h (leaf) 0.38 >More info 0.59 >More info Mock 4 h (leaf) Original data Elicitor treatments
194 24h light (+Lincomycin) 0.44 >More info 0.53 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
195 phyABDE Rc50 -0.43 >More info -0.54 >More info phyABDE Dark red light whole seedling Original data GEO bulk
196 hrpA 7h 0.39 >More info 0.58 >More info Mock 7h hrpA Original data GEO bulk
197 dde2-2 24hpi A. brassicicola -0.34 >More info -0.63 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
198 camta1/3 warm 0.40 >More info 0.56 >More info WT warm entire aerial part Original data GEO bulk
199 Col-0 under 4 days salt 0.50 >More info 0.46 >More info Col-0 under control 4 days salt treatment rosette Original data
200 gai Control 0.50 >More info 0.46 >More info Laer Control leaf discs Original data GEO bulk
201 Red Light 4 h 0.29 >More info 0.67 >More info White Light 4 h Original data Light treatments
202 A. halleri control-leaf 0.39 >More info 0.56 >More info A. petraea control-leaf Original data GEO bulk
203 essp4/sdg8-5 mutant -0.53 >More info -0.42 >More info wild type leaf Original data GEO bulk
204 Lipopolysaccaride4 h (leaf) 0.33 >More info 0.62 >More info Mock 4 h (leaf) Original data Elicitor treatments
205 flu 0.41 >More info 0.54 >More info WT Col Original data GEO bulk
206 SCR-GR Time 1H Dex 0.31 >More info 0.64 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
207 piffq FR 3h -0.41 >More info -0.54 >More info WT FR 3h whole seedling Original data GEO bulk
208 toc1-1-73hr 0.39 >More info 0.55 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
209 E.coli TUV86 2 fliC 7h 0.39 >More info 0.55 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
210 RPL18 TuMV inoculated polysomal RNA 0.51 >More info 0.43 >More info mock inoculated polysomal RNA PO Original data GEO bulk
211 coi1-16 ein2 sid2 ozone 0.53 >More info 0.41 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
212 Laer treat paclobutrazol (PAC) 0.51 >More info 0.43 >More info Laer Control leaf discs Original data GEO bulk
213 bHLH122 ox -0.43 >More info -0.51 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
214 Wt-BA-sample 0.35 >More info 0.59 >More info Wt-dmso-sample seedling Original data
215 WT 24H Cold 0.37 >More info 0.56 >More info WT control Original data GEO bulk
216 Atss3 Dark4 -0.36 >More info -0.57 >More info Atss3 Dark0.5 Original data GEO bulk
217 nhx5-1/nhx6 0.33 >More info 0.60 >More info WT Rosette leaf Original data GEO bulk
218 CBF3 100mM NaCl 0.41 >More info 0.52 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
219 E.coli 0157 H7 7h 0.34 >More info 0.59 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
220 sid2-2 24hpi A. brassicicola -0.36 >More info -0.57 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
221 mutant acs6E (single mutant) -0.40 >More info -0.52 >More info col control (single mutant) Original data GEO bulk
222 8h-DC3000 avrRpm1 0.36 >More info 0.56 >More info 8h-DC3000 leaves Original data GEO bulk
223 toc1-1-89hr -0.38 >More info -0.54 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
224 ABA JA 24h 0.27 >More info 0.65 >More info EtOH 24h 24hr Original data GEO bulk
225 Whole root - S 12H -0.38 >More info -0.54 >More info Whole root - S 0H Original data GEO bulk
226 Cocultivation 8 hrs leaf 0.39 >More info 0.53 >More info Mock cocultivation 8 hrs leaf Leaf Original data
227 cpr5 0.41 >More info 0.51 >More info WT(COL) Original data GEO bulk
228 penta mutant (higher order mutant) 0.35 >More info 0.56 >More info col control (higher order mutant) Original data GEO bulk
229 cca1-lhy before light 0.39 >More info 0.52 >More info before light whole seedlings Original data GEO bulk
230 coi1-2 0.37 >More info 0.54 >More info Col-0 mock Whole seedling Original data GEO bulk
231 DC3000 7h 0.36 >More info 0.55 >More info Mock 7h DC3000 Original data GEO bulk
232 hen1 -0.58 >More info -0.33 >More info Ler Original data GEO bulk
233 toc1-1-49hr 0.41 >More info 0.50 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
234 08h Col-0 0.30 >More info 0.61 >More info 00h Col-0 Original data GEO bulk
235 sfr6 drought -0.34 >More info -0.56 >More info WT drought All aerial tissue Original data GEO bulk
236 mil4 0.52 >More info 0.38 >More info Col rosettes Original data GEO bulk
237 Nicotinamide-53hr 0.39 >More info 0.51 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
238 rdr1-1 -0.40 >More info -0.50 >More info Col-0 Original data GEO bulk
239 Col-Luc WT 3h antimycin A 0.39 >More info 0.51 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
240 high-R:FR bud axillary -0.36 >More info -0.54 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
241 camta2/3 warm 0.38 >More info 0.52 >More info WT warm entire aerial part Original data GEO bulk
242 WT Seedling BL -0.40 >More info -0.50 >More info WT Seedling Dark Original data GEO bulk
243 Elevated CO2 AMPLE N DAY 0.39 >More info 0.51 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
244 Whole root - S 3H -0.31 >More info -0.59 >More info Whole root - S 0H Original data GEO bulk
245 AmGSTF1 expressor 0.32 >More info 0.58 >More info WT leaf tissue Original data GEO bulk
246 AgNO3 3 h 0.37 >More info 0.52 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
247 til1-1 22C 0.35 >More info 0.54 >More info Col-0 22C Original data GEO bulk
248 12h-DC3000 avrRpm1 0.28 >More info 0.61 >More info 12h-DC3000 leaves Original data GEO bulk
249 efr-1 +elf18 10h -0.36 >More info -0.53 >More info WT +elf18 10h elf18 Original data GEO bulk
250 bak1-3 +Pep2 10h 0.39 >More info 0.50 >More info WT +Pep2 10h Pep2 Original data GEO bulk
251 hrpA fliC 7h 0.39 >More info 0.50 >More info Mock 7h hrpA fliC Original data GEO bulk
252 triploid female excess -0.25 >More info -0.64 >More info tetraploid Original data GEO bulk
253 Col-0 48 hpi 0.51 >More info 0.37 >More info Col-0 uninoculated Original data GEO bulk
254 cs26 short-day -0.38 >More info -0.50 >More info Leaves-WT-SD leaf Original data GEO bulk
255 cca1-lhy 15m light 0.38 >More info 0.50 >More info 15m light whole seedlings Original data GEO bulk
256 hrcC 0.37 >More info 0.51 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
257 tor mutant glucose 0.37 >More info 0.51 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
258 Mutant pif1-2 (Dark etiol) 0.31 >More info 0.57 >More info Col-0 (Dark etiol) Original data GEO bulk
259 pif1-2 dark 0.31 >More info 0.57 >More info Wt dark Original data GEO bulk
260 WT 6H Cold 0.30 >More info 0.58 >More info WT control Original data GEO bulk
261 35S::MBF1c 0.30 >More info 0.58 >More info control Original data GEO bulk
262 pip3 At2g19270 TDNA 9 0.33 >More info 0.54 >More info Col-0 whole plant Original data GEO bulk
263 16h Col-0 0.26 >More info 0.61 >More info 00h Col-0 Original data GEO bulk
264 35S:RPS4 eds1-2 8h -0.35 >More info -0.52 >More info 35S:RPS4 8h leaves Original data
265 3x(m) 0.24 >More info 0.63 >More info 2x two week old seedlings Original data
266 swn-7 0.53 >More info 0.33 >More info Col whole plant Original data GEO bulk
267 gun4-1 0.34 >More info 0.52 >More info WT Col-0 seedling Original data GEO bulk
268 WT zebularine 5d -0.50 >More info -0.36 >More info WT mock 5d shoot apical meristem Original data
269 npr1 sni1 brca2a SA -0.35 >More info -0.51 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
270 Col-0 2HS 0.28 >More info 0.58 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
271 WT cold 12 h 0.32 >More info 0.53 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
272 Elevated CO2 AMPLE N NIGHT 0.29 >More info 0.56 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
273 Dark 2day ivd 0.86 >More info -0.01 >More info 0h ivd Original data
274 E.orontii Infection 3 day 0.25 >More info 0.60 >More info Uninfection 3 day Original data Elicitor treatments
275 WT Col-0 Bgh inoculated 0.28 >More info 0.56 >More info WT Col-0 Un-inoculated Original data GEO bulk
276 low R/FR JA spray 0.33 >More info 0.51 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
277 ACC 3 h 0.26 >More info 0.58 >More info Mock 3 h Original data Basic hormone treatment of seedlings
278 tmm1-inflorescence-tips -0.27 >More info -0.57 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
279 toc1-1-93hr 0.29 >More info 0.54 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
280 nhx6 0.30 >More info 0.53 >More info WT Rosette leaf Original data GEO bulk
281 ice1 control 0.29 >More info 0.54 >More info WT control Original data GEO bulk
282 Cor hrpS 10h 0.31 >More info 0.52 >More info Mock 10h Cor hrpS Original data GEO bulk
283 FLIGHT TAGESB plate6 SHOOTS 0.30 >More info 0.53 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
284 shoot-10 μM DEX- 12 hr 0.27 >More info 0.56 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
285 tfl1-1-16ºC 0.29 >More info 0.52 >More info WT-16ºC Original data GEO bulk
286 Mutant coi1(leaf) -0.28 >More info -0.52 >More info Col-0 (leaf) Original data GEO bulk
287 seedling 12h after HZE atm-1 0.21 >More info 0.59 >More info seedling day 1 unirradiated atm-1 12h Original data
288 seedling 12h after Gamma atm-1 0.22 >More info 0.58 >More info seedling day 1 unirradiated atm-1 12h Original data
289 S15-118 0.28 >More info 0.50 >More info wt Original data GEO bulk
290 light -0.59 >More info -0.18 >More info dark light seedling Original data GEO bulk
291 ein5-1 ski2-3 0.27 >More info 0.50 >More info Col-0 aerial tissue Original data
292 DFPM 0.27 >More info 0.50 >More info control Original data GEO bulk
293 WT 3H Cold 0.21 >More info 0.56 >More info WT control Original data GEO bulk
294 Prohexadione 3 h 0.14 >More info 0.62 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
295 AFB1 flg22 2h 0.25 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
296 15m.KCl 0.23 >More info 0.53 >More info To. KCl 14 day old Roots Original data GEO bulk
297 siliques AtHb1 control 0.24 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
298 flu dark 8hours/30 minute light 0.24 >More info 0.51 >More info col dark 8hours/30 minute light Original data GEO bulk
299 E.orontii Infection 6 h 0.23 >More info 0.51 >More info Uninfection 6 h Original data Elicitor treatments
300 gpa1 -ABA GC -0.12 >More info -0.62 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
301 Shoot submergence 7h 0.73 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
302 seedling 3h after HZE WT 0.70 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
303 AFB1 0h 0.19 >More info 0.53 >More info Col 0h Leaf Original data GEO bulk
304 seedling 6h after Gamma atm-1 0.22 >More info 0.50 >More info seedling day 1 unirradiated atm-1 6h Original data
305 Elevated CO2 expanding leaf 0.15 >More info 0.56 >More info Ambient CO2 expanding leaf expanding leaf Original data
306 eds16 whole leaf 6hpi -0.19 >More info -0.52 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
307 20h Col-0 0.14 >More info 0.55 >More info 00h Col-0 Original data GEO bulk
308 Light 3day ivd 0.09 >More info 0.58 >More info 0h ivd Original data
309 myb3 myb3r4d 0.10 >More info 0.56 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
310 bri1-116 -0.10 >More info 0.73 >More info Col seedling Original data GEO bulk
311 WT+chitooctaose 0.12 >More info 0.50 >More info WT+water chitooctaose seedlings Original data GEO bulk
312 IAA7mII over-expressor IAA Treated -0.07 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
313 seed germinating in countinuous light 24h SL -0.06 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
314 Shoot apex inflorescence (after bolting) -0.06 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
315 WT 2-4h Xanthomonas 0.03 >More info 0.56 >More info WT T0 Original data GEO bulk
316 irradiated leaf (WT 5d) -0.09 >More info -0.50 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
317 ara1/2mut -0.09 >More info 0.66 >More info Col-3 Original data GEO bulk
318 35S::CBF2 0.05 >More info 0.50 >More info Ws2 Original data GEO bulk
319 CCA1-ox 6am non-polysomal -0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
320 Infected pft1 leaf -0.17 >More info 0.52 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
321 4d red light grown hmr-22 seedlings 0.51 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data