4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Col-0 9 hpi A. brassicicola
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List of experiments correlated with "Col-0 9 hpi A. brassicicola"  Help Download transcriptome of top 30
Score Experiment Correlation from
Col-0 9 hpi A. brassicicola		 Correlation to
Col-0 9 hpi A. brassicicola		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Col-0 9 hpi A. brassicicola 1.00 >More info 1.00 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
2 ein2-1 9 hpi A. brassicicola 0.90 >More info 0.87 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
3 sid2-2 9 hpi A. brassicicola 0.92 >More info 0.83 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
4 dde2-2 9 hpi A. brassicicola 0.88 >More info 0.86 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
5 ataf1-1 mutant Col-0 Bgh inoculated 0.81 >More info 0.85 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
6 WT Col-0 Bgh inoculated 0.80 >More info 0.85 >More info WT Col-0 Un-inoculated Original data GEO bulk
7 GST NPP1 4 h (leaf) 0.78 >More info 0.84 >More info Mock 4 h (leaf) Original data Elicitor treatments
8 hrpA fliC 7h 0.79 >More info 0.81 >More info Mock 7h hrpA fliC Original data GEO bulk
9 col-5 hrpA 12h 0.76 >More info 0.82 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
10 Sulfometuron EC50 0.81 >More info 0.77 >More info Carrier Original data GEO bulk
11 flu over-tAPX 0.77 >More info 0.81 >More info WT Col Original data GEO bulk
12 flu 0.77 >More info 0.80 >More info WT Col Original data GEO bulk
13 Botrytis cinerea 48h 0.80 >More info 0.77 >More info control 48h Original data GEO bulk
14 hrcC 0.77 >More info 0.80 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
15 pepr1-1 Pepr2-3 +Pep2 2h -0.77 >More info -0.80 >More info WT +Pep2 2h Pep2 Original data GEO bulk
16 Cor hrpS 10h 0.74 >More info 0.83 >More info Mock 10h Cor hrpS Original data GEO bulk
17 Shoot -Cs 0.69 >More info 0.87 >More info Control-shoot Original data GEO bulk
18 anac017-2 AntimycinA 3h -0.76 >More info -0.80 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
19 E.coli TUV86 2 fliC 7h 0.77 >More info 0.78 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
20 Col whole leaf 7dpi 0.76 >More info 0.79 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
21 DFPM 0.76 >More info 0.79 >More info control Original data GEO bulk
22 hrpA 7h 0.79 >More info 0.76 >More info Mock 7h hrpA Original data GEO bulk
23 Col whole leaf 5dpi 0.75 >More info 0.80 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
24 IMI 4mM 0.78 >More info 0.77 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
25 B.cinerea 18 h infection 0.79 >More info 0.76 >More info Mock 18 h Original data Botrytis cinerea infection
26 Botrytis cinerea 18h 0.79 >More info 0.76 >More info control 18h Original data GEO bulk
27 oligomycin 4 h 0.78 >More info 0.76 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
28 seedlings protease IV 0.75 >More info 0.79 >More info seedlings nontreated control whole seedling Original data
29 seedlings-week-old RECA1-overexpressing
transgenic		 0.77 >More info 0.77 >More info seedlings-week-old Col-0 seedlings Original data
30 mkk1/mkk2 24h BTH rep 0.80 >More info 0.74 >More info Col-0 24h BTH rep Original data GEO bulk
31 GST 4 h (leaf) 0.70 >More info 0.84 >More info Mock 4 h (leaf) Original data Elicitor treatments
32 Col-Luc WT 3h antimycin A 0.76 >More info 0.78 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
33 CMP 4hr 0.76 >More info 0.77 >More info Acetone 4hr root Original data GEO bulk
34 Flagellin 4 h (leaf) 0.73 >More info 0.80 >More info Mock 4 h (leaf) Original data Elicitor treatments
35 Laer Flg22 2h 0.76 >More info 0.77 >More info Laer Control leaf discs Original data GEO bulk
36 col-5 DC3000 12h 0.73 >More info 0.80 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
37 Col-0-avrB-6h 0.72 >More info 0.81 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
38 Phaseolicola 2 h (leaf) 0.70 >More info 0.82 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
39 Elevated CO2 AMPLE N NIGHT 0.71 >More info 0.81 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
40 WT 2-4h Xanthomonas 0.72 >More info 0.80 >More info WT T0 Original data GEO bulk
41 bak1-3 +Pep2 10h 0.75 >More info 0.77 >More info WT +Pep2 10h Pep2 Original data GEO bulk
42 S58-2 0.74 >More info 0.78 >More info wt Original data GEO bulk
43 cpr5npr1svi1 0.76 >More info 0.76 >More info WT(COL) Original data GEO bulk
44 AgNO3 3 h 0.78 >More info 0.74 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
45 Col ozone 3h 0.67 >More info 0.85 >More info Col clean-air 3h ozone Original data GEO bulk
46 35S::ERF104 Flg22 4h 0.72 >More info 0.80 >More info 35S::ERF104 H2O 4h Original data GEO bulk
47 35S:RPS4 eds1-2 8h -0.75 >More info -0.77 >More info 35S:RPS4 8h leaves Original data
48 Laer Flg22 1h 0.74 >More info 0.77 >More info Laer Control leaf discs Original data GEO bulk
49 CLO 4mM 0.72 >More info 0.79 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
50 del1-1 mutant 5d uninfected 0.72 >More info 0.79 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
51 Laer Flg22+GA 2h 0.75 >More info 0.76 >More info Laer Control leaf discs Original data GEO bulk
52 WT AntimycinA 3h 0.73 >More info 0.78 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
53 HopZ1a treated 0.73 >More info 0.78 >More info col Original data GEO bulk
54 AvrRpt2 Col-0 6hpi 0.76 >More info 0.74 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
55 Fenclorim 4hr 0.76 >More info 0.74 >More info Acetone 4hr root Original data GEO bulk
56 +1.6 mM Tween 20 1 h. 0.66 >More info 0.84 >More info +distilled water 1 h. Original data GEO bulk
57 AvrRpm1 2 h (leaf) 0.72 >More info 0.77 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
58 Col-0 under 4 days salt 0.79 >More info 0.70 >More info Col-0 under control 4 days salt treatment rosette Original data
59 msh1 albino 0.77 >More info 0.72 >More info WT aerial part Original data GEO bulk
60 HopZ1a treated ulp1c ulp1d 0.73 >More info 0.76 >More info col Original data GEO bulk
61 Lipopolysaccaride4 h (leaf) 0.69 >More info 0.80 >More info Mock 4 h (leaf) Original data Elicitor treatments
62 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.81 >More info 0.67 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
63 35S::PI ap3-3 35S::AP-GR +DEX 0.67 >More info 0.81 >More info 0hr DEX Original data GEO bulk
64 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.82 >More info 0.66 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
65 Laer Flg22+GA 1h 0.73 >More info 0.75 >More info Laer Control leaf discs Original data GEO bulk
66 edr1 36 h powdery mildew 0.75 >More info 0.73 >More info Col-0 36 h powdery mildew Original data GEO bulk
67 WT flg22 2h 0.72 >More info 0.76 >More info WT 0h Leaf tissue Original data GEO bulk
68 Col-0 C2H4 24h 0.76 >More info 0.72 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
69 CMP 24hr 0.75 >More info 0.73 >More info Acetone 24hr root Original data GEO bulk
70 Col-0 ozone 0.81 >More info 0.66 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
71 GO5; 8h switch to ambient CO2 concentrations; 0.68 >More info 0.79 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
72 cpr5scv1 0.77 >More info 0.70 >More info WT(COL) Original data GEO bulk
73 WT Bc inoculation 14h 0.82 >More info 0.65 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
74 pmr5 pmr6 0.74 >More info 0.73 >More info Col-0 Original data GEO bulk
75 35S:RPS4 eds1-2 24h -0.73 >More info -0.74 >More info 35S:RPS4 24h leaves Original data
76 TNT-seedlings 0.74 >More info 0.73 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
77 Primisulfuron EC50 0.73 >More info 0.73 >More info Carrier (primisulfuron) Original data GEO bulk
78 tunicamycin -0.75 >More info -0.71 >More info DMF Original data GEO bulk
79 gh3.5-1D 48 hpi 0.75 >More info 0.71 >More info Col-0 uninoculated Original data GEO bulk
80 efr-1 +elf18 10h -0.71 >More info -0.75 >More info WT +elf18 10h elf18 Original data GEO bulk
81 Laer treat paclobutrazol (PAC) 0.72 >More info 0.74 >More info Laer Control leaf discs Original data GEO bulk
82 coi1-16 ein2 sid2 ctrl -0.80 >More info -0.66 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
83 SA 4mM 0.73 >More info 0.73 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
84 CT101 ozone 0.80 >More info 0.65 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
85 erf104-ko Flg22 4h 0.67 >More info 0.78 >More info erf104-ko H2O 4h Original data GEO bulk
86 Te ozone 0.79 >More info 0.66 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
87 Leafminer locally damaged thaliana seedlings 0.75 >More info 0.70 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
88 CMV-WT 0.72 >More info 0.73 >More info Mock-At Aerial tissues Original data GEO bulk
89 rcf1-1 cold 24h 0.71 >More info 0.74 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
90 cat2-2; 8h switch to ambient CO2 concentrations; 0.70 >More info 0.75 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
91 col-5 DC3000-avrRpm 4h 0.70 >More info 0.75 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
92 ERF96OE 0.71 >More info 0.74 >More info WT leaf Original data
93 Triazolopyrimidine EC50 0.73 >More info 0.72 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
94 safener treated 0.70 >More info 0.75 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
95 mkk1/mkk2 control rep 0.75 >More info 0.70 >More info Col-0 Time 0 rep Original data GEO bulk
96 ice1 control 0.74 >More info 0.70 >More info WT control Original data GEO bulk
97 Seedling KUA1-IOX est 0.71 >More info 0.73 >More info Seedling KUA1-IOX mock Original data
98 mil4 BTH 0.76 >More info 0.68 >More info Col BTH rosettes Original data GEO bulk
99 AFB1 flg22 2h 0.70 >More info 0.74 >More info WT 0h Leaf tissue Original data GEO bulk
100 WT NAA/flg 1h 0.71 >More info 0.73 >More info WT 0h Leaf tissue Original data GEO bulk
101 WT flg22 1h 0.69 >More info 0.75 >More info WT 0h Leaf tissue Original data GEO bulk
102 mpk6-ko Flg22 4h 0.66 >More info 0.78 >More info mpk6-ko H2O 4h Original data GEO bulk
103 petiole in D 0.73 >More info 0.71 >More info petiole in WL petioles Original data GEO bulk
104 pvip1 pvip2 0.71 >More info 0.73 >More info Col-0 whole rosettes Original data GEO bulk
105 SLWF infested 0.72 >More info 0.72 >More info SLWF uninfested rosette tissue Original data GEO bulk
106 wrky33 Bc inoculation 14h 0.81 >More info 0.62 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
107 C24 ozone 0.80 >More info 0.63 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
108 ice1 6H Cold 0.73 >More info 0.70 >More info WT 6H Cold Original data GEO bulk
109 Pto inoculated 0.70 >More info 0.73 >More info col Original data GEO bulk
110 ulp1c ulp1d +Pto 0.69 >More info 0.74 >More info ulp1c ulp1d mock Original data GEO bulk
111 S15-118 0.71 >More info 0.72 >More info wt Original data GEO bulk
112 P.p 6hai 0.69 >More info 0.73 >More info At-Control roots Original data GEO bulk
113 aerial organ callus inducing medium 12 h 0.75 >More info 0.67 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
114 Dex-rga(delta17) 4h GA4+DEX -0.74 >More info -0.68 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
115 shoots bhlh100/101 0uM Fe 0.76 >More info 0.66 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
116 miR393 flg22 1h 0.65 >More info 0.77 >More info WT 0h Leaf tissue Original data GEO bulk
117 DC3000 2 h (leaf) 0.66 >More info 0.76 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
118 ceh1 mutant 0.73 >More info 0.69 >More info Parent line Original data
119 UV 0.74 >More info 0.68 >More info WT aerial region Original data GEO bulk
120 Osmotic Stress 24 h (shoot) 0.75 >More info 0.66 >More info Stress mock 24 h (shoot) Original data Stress treatments
121 E.coli 0157 H7 7h 0.62 >More info 0.79 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
122 miR393 flg22 2h 0.63 >More info 0.78 >More info WT 0h Leaf tissue Original data GEO bulk
123 bio4-1 mutant leaves 0.68 >More info 0.73 >More info WT leaves leaves Original data GEO bulk
124 anac017-1 H2O2 3h -0.72 >More info -0.69 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
125 P.syringae AvrRpt2 4 h (leaf) 0.71 >More info 0.70 >More info Mock 4 h (leaf) Original data Elicitor treatments
126 WT NAA/flg 2h 0.66 >More info 0.74 >More info WT 0h Leaf tissue Original data GEO bulk
127 P.p 10.5hai 0.65 >More info 0.75 >More info At-Control roots Original data GEO bulk
128 cpr5npr1 0.74 >More info 0.66 >More info WT(COL) Original data GEO bulk
129 WT-SA 0.70 >More info 0.70 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
130 sid2-1 cold -0.73 >More info -0.67 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
131 cs26 long day 0.71 >More info 0.69 >More info Leaves-WT-LD leaf Original data GEO bulk
132 edr1 18 h powdery mildew 0.75 >More info 0.65 >More info Col-0 18 h powdery mildew Original data GEO bulk
133 gun1gun5 far-red pretreated -0.68 >More info -0.71 >More info WT far-red pretreated Original data GEO bulk
134 aerial organ callus inducing medium 48 h 0.78 >More info 0.61 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
135 penta Alternaria 3dpi 0.74 >More info 0.65 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
136 R. solani AG8 0.75 >More info 0.64 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
137 Cor 10h 0.67 >More info 0.72 >More info Mock 10h Cor Original data GEO bulk
138 AFB1 flg22 1h 0.66 >More info 0.73 >More info WT 0h Leaf tissue Original data GEO bulk
139 DC3000 7h 0.63 >More info 0.75 >More info Mock 7h DC3000 Original data GEO bulk
140 Pst-DC3000(avrRpm1)-4hpi 0.64 >More info 0.74 >More info Pst-DC3000-4hpi Original data GEO bulk
141 rosette leaves fdh 0.67 >More info 0.71 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
142 col-5 hrpA 2h 0.68 >More info 0.70 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
143 WT-NOCO2 INFECTED 0.70 >More info 0.68 >More info WT-MOCK Original data GEO bulk
144 gai Control 0.74 >More info 0.64 >More info Laer Control leaf discs Original data GEO bulk
145 coi1-16 ein2 sid2 ozone 0.79 >More info 0.59 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
146 pad4-PsmES4326-24hpi -0.67 >More info -0.70 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
147 pnp1-1 3h +P 0.72 >More info 0.65 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
148 rpoTmp(line) MLD stressed 0.68 >More info 0.69 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
149 camta1/2/3 24h cold 0.69 >More info 0.68 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
150 root Dosed gold 0.70 >More info 0.67 >More info root No gold .125 mM gold 24 h roots Original data
151 vte2-1 3d vernalization 0.72 >More info 0.65 >More info WT 3d vernalization Original data GEO bulk
152 aerial organ callus inducing medium 24h 0.75 >More info 0.62 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
153 Col0-PsmES4326-24hpi 0.76 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
154 0.125 mM gold 24 h 0.70 >More info 0.67 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
155 mkk2 24h BTH rep 0.68 >More info 0.68 >More info Col-0 24h BTH rep Original data GEO bulk
156 Fenclorim 24hr 0.68 >More info 0.68 >More info Acetone 24hr root Original data GEO bulk
157 pepr1-1 Pepr2-3 +Pep2 10h -0.68 >More info -0.68 >More info WT +Pep2 10h Pep2 Original data GEO bulk
158 Mutant siz1-3 (Drought) 0.68 >More info 0.68 >More info Col-0 (Drought) Original data GEO bulk
159 siz1-3 drought 0.68 >More info 0.68 >More info Col-0 drought Original data GEO bulk
160 Dex-rga(delta17) 2h GA4+DEX -0.71 >More info -0.65 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
161 P.p 2.5hai 0.66 >More info 0.70 >More info At-Control roots Original data GEO bulk
162 UV Stress 24 h (shoot) 0.71 >More info 0.65 >More info Stress mock 24 h (shoot) Original data Stress treatments
163 Nicotinamide-69hr 0.72 >More info 0.64 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
164 camta1/2/3 warm 0.70 >More info 0.66 >More info WT warm entire aerial part Original data GEO bulk
165 Dark 3day ivd 0.73 >More info 0.62 >More info 0h ivd Original data
166 Col-0 flu HL 3h 0.66 >More info 0.69 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
167 pnp1-1 1wk +P 0.74 >More info 0.61 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
168 Col ozone 2d 0.62 >More info 0.73 >More info Col clean-air 2d ozone Original data GEO bulk
169 Light 3day wt -0.76 >More info -0.59 >More info 0h wt Original data
170 bHLH122 ox -0.65 >More info -0.70 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
171 P.p 30hai 0.63 >More info 0.72 >More info At-Control roots Original data GEO bulk
172 ARR22-ox (t-zeatin 3 h) 0.71 >More info 0.64 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
173 cpr5 0.67 >More info 0.67 >More info WT(COL) Original data GEO bulk
174 Elevated CO2 fully expanded leaf 0.72 >More info 0.62 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
175 smg7b-1 0.65 >More info 0.69 >More info WT whole plant Original data GEO bulk
176 Mutant gh3.5-1D (AvrRpt2) 0.63 >More info 0.71 >More info Col-0 (AvrRpt2) Original data GEO bulk
177 Elevated CO2 AMPLE N DAY 0.64 >More info 0.70 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
178 col-5 hrpA 4h 0.63 >More info 0.70 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
179 ice1 24H Cold 0.72 >More info 0.61 >More info WT 24H Cold Original data GEO bulk
180 gpa1 -ABA GC -0.63 >More info -0.70 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
181 WT in -N 0.72 >More info 0.61 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
182 miR393 0h -0.61 >More info -0.72 >More info WT 0h Leaf tissue Original data GEO bulk
183 Shoot -K 0.70 >More info 0.63 >More info Control-shoot Original data GEO bulk
184 leaf blade in D 0.63 >More info 0.70 >More info leaf blade in WL leaf blades Original data GEO bulk
185 K starvation (shoot) 0.70 >More info 0.63 >More info Ws (shoot) Original data GEO bulk
186 rosette Dark Wounded 0.64 >More info 0.68 >More info rosette Dark Control Original data GEO bulk
187 Col leaves 48h LT 0.68 >More info 0.64 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
188 eds16 whole leaf 5dpi -0.64 >More info -0.68 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
189 8h-DC3000 avrRpm1 0.64 >More info 0.68 >More info 8h-DC3000 leaves Original data GEO bulk
190 pho1 0.72 >More info 0.60 >More info Col2WT Original data GEO bulk
191 WT+H2O2 0.59 >More info 0.73 >More info WT H2O2 Original data GEO bulk
192 Nicotinamide-53hr 0.70 >More info 0.62 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
193 oligomycin 1 h 0.62 >More info 0.70 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
194 ORS1 induced 0.68 >More info 0.63 >More info mock-induced rosette leaves Original data GEO bulk
195 ice1 3H Cold 0.73 >More info 0.58 >More info WT 3H Cold Original data GEO bulk
196 Leafminer damaged seedlings 0.75 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
197 WT 3h -P 0.59 >More info 0.72 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
198 Cycloheximide 3 h 0.62 >More info 0.69 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
199 cpr5 0.69 >More info 0.62 >More info WT seedling Original data GEO bulk
200 Col whole leaf amplified 5 dpi 0.67 >More info 0.64 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
201 PAHs stress 0.70 >More info 0.61 >More info exp control phenanthrene whole plants Original data GEO bulk
202 npr1-1 SA -0.67 >More info -0.63 >More info Col-0 SA complete seedling Original data
203 WT+chitooctaose 0.52 >More info 0.78 >More info WT+water chitooctaose seedlings Original data GEO bulk
204 Chitosan 3h Treatment 0.64 >More info 0.66 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
205 aerial organ callus inducing medium 96 h 0.66 >More info 0.64 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
206 Laer pretreat GA+JA Flg22 0h 0.69 >More info 0.61 >More info Laer pretreat water control leaf discs Original data GEO bulk
207 Laer pretreat GA Flg22 1h 0.59 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
208 LTN008-2 aza-dc 0.70 >More info 0.60 >More info LTN012-2 Mock Original data
209 aba3-1 0.62 >More info 0.67 >More info wt Original data GEO bulk
210 Col-0 48 hpi 0.68 >More info 0.61 >More info Col-0 uninoculated Original data GEO bulk
211 bZIP1ko mutant N+Light- 0.61 >More info 0.67 >More info WT-sib N+Light- whole plant Original data GEO bulk
212 WT +elf18 2h 0.58 >More info 0.70 >More info WT untreated elf18 Original data GEO bulk
213 Shoot submergence 24h 0.69 >More info 0.59 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
214 pmr5 0.59 >More info 0.69 >More info Col-0 Original data GEO bulk
215 DC3000 hrcC 2 h (leaf) 0.59 >More info 0.69 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
216 coi1-2 0.61 >More info 0.66 >More info Col-0 mock Whole seedling Original data GEO bulk
217 vtc2 (I) 0.68 >More info 0.59 >More info Col (I) rosette Original data GEO bulk
218 Col-0 low oxygen 0.65 >More info 0.62 >More info Col-0 Original data GEO bulk
219 myb3 myb3r4d 0.62 >More info 0.65 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
220 rosette Light Wounded 0.56 >More info 0.70 >More info rosette Light Control Original data GEO bulk
221 vtc1 (II) 0.65 >More info 0.61 >More info Col (II) rosette Original data GEO bulk
222 5-Triiodobenzoic acid3 h 0.65 >More info 0.61 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
223 phr1 phl1 Root-Pi 0.70 >More info 0.56 >More info WT Shoot+Pi roots Original data GEO bulk
224 Nicotinamide-65hr 0.68 >More info 0.58 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
225 R. solani AG2-1 0.69 >More info 0.57 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
226 petiole in FRD 0.69 >More info 0.57 >More info petiole in WL petioles Original data GEO bulk
227 gh3.5D uninoculated -0.69 >More info -0.57 >More info Col-0 48 hpi Original data GEO bulk
228 Nicotinamide-73hr 0.69 >More info 0.57 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
229 Laer pretreat JA Flg22 1h 0.68 >More info 0.57 >More info Laer pretreat water control leaf discs Original data GEO bulk
230 1 h Light IP RNA -0.59 >More info -0.66 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
231 chito-octamer 0.54 >More info 0.71 >More info Col Mock Original data GEO bulk
232 Col BTH 0.58 >More info 0.67 >More info Col rosettes Original data GEO bulk
233 camta1/3 warm 0.61 >More info 0.64 >More info WT warm entire aerial part Original data GEO bulk
234 Col-0 V. longisporum-inoculated 48 hpi 0.61 >More info 0.64 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
235 1 h Light Total RNA -0.58 >More info -0.67 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
236 WT powdery mildew 0.68 >More info 0.57 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
237 Leafminer systemically damaged thaliana seedlings 0.68 >More info 0.57 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
238 GST-overexpression seedlings control 0.66 >More info 0.59 >More info WT seedlings control Seedlings Original data
239 leaf blade in FRD 0.61 >More info 0.64 >More info leaf blade in WL leaf blades Original data GEO bulk
240 mbd6 mutant thaliana 10-day-old seedling 0.68 >More info 0.56 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
241 S14-150 0.61 >More info 0.63 >More info wt Original data GEO bulk
242 toc1-1-49hr 0.60 >More info 0.64 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
243 WT 1wk -P 0.71 >More info 0.53 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
244 Mature callus 0.66 >More info 0.58 >More info Young callus hypocotyls Original data GEO bulk
245 abh1 -ABA 0.51 >More info 0.73 >More info Col-0 -ABA Original data GEO bulk
246 gpa1-4/agb1-2 ozone 2d -0.61 >More info -0.63 >More info Col ozone 2d ozone Original data GEO bulk
247 RPL18 TuMV inoculated total RNA 0.61 >More info 0.63 >More info mock inoculated total RNA PO Original data GEO bulk
248 4d red light grown hmr-5 seedlings 0.69 >More info 0.55 >More info 4d red light grown WT(Col-0) seedlings Original data
249 ASL9-ox -0.65 >More info -0.59 >More info WT aerial parts of seedlings Original data GEO bulk
250 Nicotinamide-85hr 0.65 >More info 0.58 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
251 sid2 -0.65 >More info -0.58 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
252 Nicotinamide-93hr 0.67 >More info 0.56 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
253 low CO2 + light 0.64 >More info 0.59 >More info normal CO2 + light Original data GEO bulk
254 bio4-1 mutant watered00µM biotin leaves -0.61 >More info -0.62 >More info bio4-1 mutant leaves leaves Original data GEO bulk
255 OH1 0.62 >More info 0.61 >More info Col-0 leaves Original data GEO bulk
256 ABA DFPM 0.64 >More info 0.59 >More info control Original data GEO bulk
257 atgsnor1-3-avrB-6h 0.62 >More info 0.61 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
258 downy mildew cotyledons late stage 0.66 >More info 0.56 >More info mock inoculated Cotyledons Original data GEO bulk
259 Mutant siz1-3 0.65 >More info 0.57 >More info Col-0 Original data GEO bulk
260 Nicotinamide-89hr 0.64 >More info 0.58 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
261 Col whole leaf 5 dpi 0.62 >More info 0.60 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
262 siz1-3 control 0.65 >More info 0.57 >More info Col-0 control Original data GEO bulk
263 rcf1-1 cold 12h 0.61 >More info 0.61 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
264 upf1 0.58 >More info 0.63 >More info WT whole plant Original data GEO bulk
265 Col-0 INA 48h 0.66 >More info 0.55 >More info Col-0 MOCK 48h Original data GEO bulk
266 Laer pretreat GA+JA Flg22 1h 0.66 >More info 0.55 >More info Laer pretreat water control leaf discs Original data GEO bulk
267 Col-0 Flg22 4h 0.51 >More info 0.70 >More info Col-0 H2O 4h Original data GEO bulk
268 detached inflorescences 24h 0.59 >More info 0.62 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
269 sni1 0.52 >More info 0.69 >More info WT Original data GEO bulk
270 IRP1-OE-Fe--shoot 0.63 >More info 0.58 >More info COL-0-Fe--shoot shoot Original data
271 CAX1/CAX3 mutant 0.65 >More info 0.56 >More info Col whole plant Original data GEO bulk
272 sfr2 control -0.56 >More info -0.65 >More info WT control All aerial tissue Original data GEO bulk
273 col-5 DC3000 4h 0.45 >More info 0.76 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
274 A. thaliana-A. lyrata hybrid -0.53 >More info -0.67 >More info A. thaliana mature leaves before flowering Original data GEO bulk
275 CMV-A2b mutant 0.68 >More info 0.52 >More info Mock-At Aerial tissues Original data GEO bulk
276 Imidazolinone EC50 0.58 >More info 0.62 >More info Carrier (Imidazolinone) Original data GEO bulk
277 8hr-pH4.5 0.61 >More info 0.59 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
278 PBZ 0.62 >More info 0.58 >More info none PBZ Rosette Original data GEO bulk
279 WT +elf18 10h 0.60 >More info 0.60 >More info WT untreated elf18 Original data GEO bulk
280 SCR-GR Time 1H Dex 0.69 >More info 0.51 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
281 camta2/3 warm 0.59 >More info 0.60 >More info WT warm entire aerial part Original data GEO bulk
282 gpa1 -ABA LF 0.60 >More info 0.59 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
283 rosette leaves lcr 0.59 >More info 0.60 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
284 6h +Pi -0.62 >More info -0.57 >More info 6h -Pi root Original data GEO bulk
285 Heat shock optimum 0.54 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
286 Salt Stress 24 h (root) 0.62 >More info 0.57 >More info Stress mock 24 h (root) Original data Stress treatments
287 chito-tetramer 0.49 >More info 0.70 >More info Col Mock Original data GEO bulk
288 ani1 T0.5 -0.55 >More info -0.63 >More info WT T0.5 root tissue Original data GEO bulk
289 nia1nia2 0.55 >More info 0.63 >More info Col-0 whole seedlings Original data GEO bulk
290 arf2 mock 0.60 >More info 0.58 >More info Col mock Original data GEO bulk
291 Leaf GLU1-KO 0.59 >More info 0.59 >More info Leaf Col(0) rosette leaves Original data GEO bulk
292 Mutant arf2 (etiol) 0.60 >More info 0.58 >More info Col (etiol) Original data GEO bulk
293 Nicotinamide-81hr 0.66 >More info 0.51 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
294 WT H2O2 3h 0.56 >More info 0.61 >More info WT water 3h 3h_H2O2 Original data GEO bulk
295 WT roots - Fe 0.66 >More info 0.51 >More info WT roots + Fe Roots Original data GEO bulk
296 abi4 vtc2 (I) 0.64 >More info 0.53 >More info Col (I) rosette Original data GEO bulk
297 gpa1 +ABA GC -0.52 >More info -0.65 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
298 20d after anthesis 0.65 >More info 0.51 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
299 ataf1-1 mutant Col-0 Un-inoculated -0.62 >More info -0.54 >More info WT Col-0 Un-inoculated Original data GEO bulk
300 aox1a:rpoTmp untreated 0.56 >More info 0.60 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
301 WT 30μM arsenate 8 hours. 0.65 >More info 0.51 >More info WT control (not supplemented). Original data
302 Cocultivation 8 hrs root 0.66 >More info 0.50 >More info Mock cocultivation 8 hrs root Root Original data
303 arf2 brz -0.62 >More info -0.54 >More info arf2 mock Original data GEO bulk
304 PNO8 3 h 0.49 >More info 0.67 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
305 pnp1-1 1wk -P 0.72 >More info 0.44 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
306 cs26 short-day -0.58 >More info -0.58 >More info Leaves-WT-SD leaf Original data GEO bulk
307 CeO2 germinant -0.45 >More info -0.71 >More info Millipore Water germinant CeO2 seedling Original data
308 Laer pretreat GA Flg22 0h 0.66 >More info 0.49 >More info Laer pretreat water control leaf discs Original data GEO bulk
309 Col-0 low oxygen 0.57 >More info 0.58 >More info Col-0 control low oxygen root Original data GEO bulk
310 atgsnor1-1 -0.54 >More info -0.61 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
311 plant (tga2-5-6) 4h phytoprostane A1 0.65 >More info 0.50 >More info plant (tga2-5-6) 4h control Original data GEO bulk
312 tor mutant glucose 0.65 >More info 0.50 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
313 GSH 0.54 >More info 0.61 >More info control GSH treated seedlings Original data GEO bulk
314 Laer pretreat JA Flg22 2h 0.67 >More info 0.48 >More info Laer pretreat water control leaf discs Original data GEO bulk
315 Nicotinamide-57hr 0.62 >More info 0.53 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
316 abi4-102 (II) 0.62 >More info 0.52 >More info Col (II) rosette Original data GEO bulk
317 Mutant coi1(leaf) -0.56 >More info -0.58 >More info Col-0 (leaf) Original data GEO bulk
318 Glyphosate EC50 0.65 >More info 0.49 >More info Carrier (Glyphosate) Original data GEO bulk
319 DC3000 24h 0.58 >More info 0.56 >More info Mock 24h DC3000 Original data GEO bulk
320 Ba1 UV 0.68 >More info 0.45 >More info Ba1 mock UV seedling Original data
321 short 8-degree- 0.58 >More info 0.55 >More info control short Original data GEO bulk
322 Stem tissue 5 days NAA 0.50 >More info 0.63 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
323 Myzus persicae saliva 0.53 >More info 0.60 >More info Control Original data GEO bulk
324 Col-0 INA 6d 0.71 >More info 0.42 >More info Col-0 MOCK 6d Original data GEO bulk
325 aphid saliva treated 0.53 >More info 0.60 >More info control aphid saliva treated leaves Original data GEO bulk
326 WT light -0.59 >More info -0.54 >More info WT dark Original data GEO bulk
327 upf3 0.60 >More info 0.53 >More info WT whole plant Original data GEO bulk
328 Seedling-HeatStressed TOTALmRNA 0.52 >More info 0.61 >More info Seedling-control TOTALmRNA seedling Original data
329 sfr6 drought -0.42 >More info -0.71 >More info WT drought All aerial tissue Original data GEO bulk
330 wavy 0.58 >More info 0.54 >More info WT Original data GEO bulk
331 scrm-D 0.64 >More info 0.48 >More info Col-0 WT whole seedling Original data GEO bulk
332 Cor 24h 0.61 >More info 0.51 >More info Mock 24h Cor Original data GEO bulk
333 Te 1d 0.59 >More info 0.53 >More info Te CA Leaves Original data
334 Cold Stress 24 h (shoot) 0.59 >More info 0.53 >More info Stress mock 24 h (shoot) Original data Stress treatments
335 tt4 0.59 >More info 0.53 >More info Col-0 aerial part Original data
336 cell culture 4 h phytoprostane A1 0.50 >More info 0.62 >More info cell culture 4 h control Original data GEO bulk
337 Whole root - low pH 12H 0.59 >More info 0.53 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
338 Dark 6h ivd 0.66 >More info 0.46 >More info 0h ivd Original data
339 Laer pretreat GA+JA Flg22 2h 0.62 >More info 0.50 >More info Laer pretreat water control leaf discs Original data GEO bulk
340 Col 3d 0.49 >More info 0.63 >More info Col CA Leaves Original data
341 35S:RPS4 eds1-2 2h -0.43 >More info -0.69 >More info 35S:RPS4 2h leaves Original data
342 Mutant arf2-6 -0.67 >More info -0.44 >More info Col Original data GEO bulk
343 IRP1-OE-Ctrl--root 0.55 >More info 0.56 >More info COL-0-Ctrl--root root Original data
344 mbd4 mutant thaliana 10-day-old seedling 0.63 >More info 0.48 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
345 Differentiation 12h 0.60 >More info 0.51 >More info Differentiation 0h leaves Original data
346 GRX-overexpression seedlings control 0.63 >More info 0.48 >More info WT seedlings control Seedlings Original data GEO bulk
347 Wounding Stress3 h (shoot) 0.51 >More info 0.60 >More info Stress mock 3 h (shoot) Original data Stress treatments
348 P35S:rGRF3 0.63 >More info 0.48 >More info WS Original data GEO bulk
349 irradiated leaf (cmt 1d) 0.64 >More info 0.46 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
350 NAA -AA 0.57 >More info 0.53 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
351 SCR-GR Time 12H Dex 0.63 >More info 0.47 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
352 Nicotinamide-49hr 0.62 >More info 0.48 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
353 aox1a(line) MLD stressed 0.55 >More info 0.55 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
354 35S:RPS4 rrs1-11 8h -0.56 >More info -0.54 >More info 35S:RPS4 8h leaves Original data
355 WT chitooctaose 0.48 >More info 0.62 >More info WT water Original data GEO bulk
356 short 10-degree- 0.54 >More info 0.55 >More info control short Original data GEO bulk
357 Phytoprostane A1 4 h 0.54 >More info 0.55 >More info Col-0 Original data GEO bulk
358 shoot-10 μM DEX- 6 hr 0.54 >More info 0.55 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
359 oas-a1.1 Cd 18h 0.46 >More info 0.63 >More info Cd 18h root Root Original data GEO bulk
360 WT seedlings MV 0.58 >More info 0.51 >More info WT seedlings control Seedlings Original data GEO bulk
361 treated group 0.52 >More info 0.57 >More info Control group Original data
362 camta3-2 0.62 >More info 0.47 >More info WT Original data GEO bulk
363 M6PR transgenic 0mM NaCl 0.59 >More info 0.50 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
364 agb1 gpa1 -ABA GC -0.51 >More info -0.58 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
365 WT no Pi 0.60 >More info 0.49 >More info WT complete seedlings Original data
366 OE WRKY63.3 high light 0.50 >More info 0.59 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
367 MIL4 ox BTH 0.59 >More info 0.50 >More info Col BTH Original data GEO bulk
368 atmospheric CO2 low Mg shoot 0.62 >More info 0.47 >More info atmospheric CO2 normal Mg shoot Shoot Original data
369 Ws 100mM NaCl 0.52 >More info 0.56 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
370 overexpresser LBD38 in -N -0.63 >More info -0.45 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
371 WT cold 0.56 >More info 0.52 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
372 Ws leaf 100mM NaCl 0.52 >More info 0.56 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
373 Drought Stress 24 h (shoot) 0.63 >More info 0.45 >More info Stress mock 24 h (shoot) Original data Stress treatments
374 des1.1 0.52 >More info 0.56 >More info Leaves-WT leaf Original data GEO bulk
375 lht1 PstDC3000 48h 0.51 >More info 0.57 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
376 C24-3h IAA 0.61 >More info 0.47 >More info C24-0h IAA whole plant Original data GEO bulk
377 Got7 UV 0.45 >More info 0.63 >More info Got7 mock UV seedling Original data
378 Col laser microdissected 5 dpi 0.47 >More info 0.61 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
379 protoplasts T2 [flg22] 0.42 >More info 0.66 >More info protoplasts T2 [CPK] mesophyll protoplasts Original data GEO bulk
380 15m.KCl 0.44 >More info 0.64 >More info To. KCl 14 day old Roots Original data GEO bulk
381 rao2 H2O2 3h -0.43 >More info -0.65 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
382 sta1 0.47 >More info 0.61 >More info WT Original data GEO bulk
383 cat2-hCO2 -0.66 >More info -0.41 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
384 phr1 Root-Pi 0.64 >More info 0.43 >More info WT Root+Pi roots Original data GEO bulk
385 AsAKiin11 T2 0.52 >More info 0.55 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
386 csn5 (csn5a-2 csn5b) light 0.56 >More info 0.51 >More info WT light Original data GEO bulk
387 Time-0 chr11-1chr17-1 -0.57 >More info -0.50 >More info Time-0 Col-0 leaf explants Original data
388 leaf13 0.48 >More info 0.59 >More info unwounded leaves none Original data GEO bulk
389 9 hr Hypoxia IP RNA 0.53 >More info 0.53 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
390 AtMYB30-ox 2-4h Xanthomonas 0.62 >More info 0.44 >More info WT 2-4h Xanthomonas Original data GEO bulk
391 (Col-0)+100 uM As 0.50 >More info 0.56 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
392 ckh1 CK200 0.51 >More info 0.55 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
393 D2O 0.66 >More info 0.40 >More info H2O seedling Original data GEO bulk
394 (Col-0)+200 uM As 0.53 >More info 0.53 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
395 vte2 leaves 48h LT 0.67 >More info 0.39 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
396 Col-0 norflurazon 0.49 >More info 0.57 >More info Col-0 control Original data GEO bulk
397 Col-0 SA 0.49 >More info 0.57 >More info Col-0 Original data GEO bulk
398 Shoot dark control 7h 0.55 >More info 0.50 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
399 9 hr Hypoxia 1 hr recovery IP RNA 0.52 >More info 0.53 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
400 OE WRKY40.4 high light 0.49 >More info 0.56 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
401 (Ws-2)+100 uM As 0.58 >More info 0.47 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
402 WT-elf18 0.47 >More info 0.58 >More info WT-mock infiltration 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
403 penta Control 0.61 >More info 0.43 >More info Laer Control leaf discs Original data GEO bulk
404 atmyc2 Seedling BL+ABA -0.52 >More info -0.52 >More info WT Seedling BL+ABA Original data GEO bulk
405 shoots WT 0uM Fe 0.70 >More info 0.34 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
406 npr1-PsmES4326-24hpi -0.52 >More info -0.52 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
407 sps1 -0.67 >More info -0.37 >More info WT seedling Original data GEO bulk
408 til1-1 22C 0.53 >More info 0.51 >More info Col-0 22C Original data GEO bulk
409 low CO2 + dark 0.60 >More info 0.44 >More info normal CO2 + light Original data GEO bulk
410 agb1 gpa1 +ABA LF -0.51 >More info -0.53 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
411 E.orontii Infection 3 day 0.37 >More info 0.67 >More info Uninfection 3 day Original data Elicitor treatments
412 ein2-PsmES4326-24hpi -0.41 >More info -0.63 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
413 Dex-rga(delta17) 4h GA4 -0.47 >More info -0.57 >More info Vector 4h GA4 shoots Original data GEO bulk
414 del1-1 5dpi 0.56 >More info 0.47 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
415 albino Ds13-2198-1 -0.62 >More info -0.41 >More info control Original data GEO bulk
416 smg5-2 0.54 >More info 0.49 >More info WT whole plant Original data GEO bulk
417 exo70A1 0.60 >More info 0.43 >More info Col-0 whole plant Original data GEO bulk
418 Elevated CO2 expanding leaf 0.59 >More info 0.44 >More info Ambient CO2 expanding leaf expanding leaf Original data
419 Heat shock 20%Inhibition 0.58 >More info 0.45 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
420 tZ -0.58 >More info -0.45 >More info DMSO--WT trans-zeatin roots Original data GEO bulk
421 Col whole leaf 3dpi 0.48 >More info 0.55 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
422 inhibitor A Treated 0.41 >More info 0.62 >More info Negative Control Original data GEO bulk
423 RPL18 TuMV inoculated polysomal RNA 0.51 >More info 0.51 >More info mock inoculated polysomal RNA PO Original data GEO bulk
424 WT Red light 18h -0.55 >More info -0.47 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
425 sfr3 cold 0.55 >More info 0.47 >More info WT cold All aerial tissue Original data GEO bulk
426 WT hypoxia 0.51 >More info 0.51 >More info WT normoxia whole rosette Original data
427 ani1 T16 -0.54 >More info -0.48 >More info WT T16 root tissue Original data GEO bulk
428 Bur-0-1h IAA 0.58 >More info 0.44 >More info Bur-0h IAA whole plant Original data GEO bulk
429 ein5-1 ski2-3 0.44 >More info 0.58 >More info Col-0 aerial tissue Original data
430 dense canopy 0.48 >More info 0.54 >More info single (control) petiole Original data GEO bulk
431 atmyc2 Seedling BL -0.36 >More info -0.66 >More info WT Seedling BL Original data GEO bulk
432 Rsch 3d 0.47 >More info 0.55 >More info Rsch CA Leaves Original data
433 AZC 0.56 >More info 0.45 >More info noneHS Original data GEO bulk
434 rosettes WT drought 0.53 >More info 0.48 >More info rosettes WT watered Original data GEO bulk
435 dor drought 0.55 >More info 0.46 >More info WT drought Original data GEO bulk
436 cdpk6-yfp 0.63 >More info 0.38 >More info Kan seedlings Original data GEO bulk
437 pif3 Dark 0h -0.61 >More info -0.40 >More info WT Dark 0h etiolated seedling Original data GEO bulk
438 WT +Pep2 2h 0.66 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
439 Seedling-HeatStressed POLYSOMESmRNA 0.47 >More info 0.54 >More info Seedling-control POLYSOMESmRNA seedling Original data
440 toc1-1-65hr 0.56 >More info 0.44 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
441 tor mutant 0.66 >More info 0.34 >More info WT (Col) none seedlings Original data GEO bulk
442 apk1 apk2 0.58 >More info 0.42 >More info Col0-control whole rosette Original data GEO bulk
443 35S:VND7-VP16-GR+CHX 0.47 >More info 0.53 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
444 WT Seedling BL -0.47 >More info -0.53 >More info WT Seedling Dark Original data GEO bulk
445 Salt Stress 24 h (shoot) 0.55 >More info 0.44 >More info Stress mock 24 h (shoot) Original data Stress treatments
446 bZIP1ko mutant N+Light+ 0.56 >More info 0.43 >More info WT-sib N+Light+ whole plant Original data GEO bulk
447 gun1-1 +lincomycin -0.56 >More info -0.43 >More info Col-0 +lincomycin Original data GEO bulk
448 fls1-3 0.50 >More info 0.49 >More info Col-0 Rosette leaves Original data
449 sav1-1 shade 0.50 >More info 0.49 >More info Col-0 shade seedlings Original data GEO bulk
450 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.68 >More info -0.31 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
451 Full AC2 T2 0.56 >More info 0.43 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
452 Aerobic e1 ate2 0.58 >More info 0.41 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
453 ACC 3 h 0.38 >More info 0.61 >More info Mock 3 h Original data Basic hormone treatment of seedlings
454 Laer Alternaria 3dpi -0.36 >More info -0.63 >More info Laer Control leaf discs Original data GEO bulk
455 Shoot dark control 24h 0.49 >More info 0.50 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
456 bak1-3 +Pep2 2h 0.38 >More info 0.61 >More info WT +Pep2 2h Pep2 Original data GEO bulk
457 pmr4-1 powdery mildew 0.44 >More info 0.55 >More info WT powdery mildew uninoculated Original data GEO bulk
458 sav1-1 light 0.46 >More info 0.53 >More info Col-0 light seedlings Original data GEO bulk
459 Nicotinamide-61hr 0.60 >More info 0.38 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
460 rosettes myoox drought 0.52 >More info 0.46 >More info rosettes myoox watered Original data GEO bulk
461 Col-0-3h IAA 0.57 >More info 0.41 >More info Col-0-0h IAA whole plant Original data GEO bulk
462 35S-MIF1 dark grown 0.60 >More info 0.38 >More info Dark-grown WT control Original data GEO bulk
463 Mutant ein2(leaf) -0.39 >More info -0.59 >More info Col-0 (leaf) Original data GEO bulk
464 Col in Pi deficiency medium 0.35 >More info 0.63 >More info Col in control medium root Original data GEO bulk
465 pif4pif5 mut dark -0.43 >More info -0.55 >More info WT dark Original data GEO bulk
466 Bur-0-3h IAA 0.48 >More info 0.50 >More info Bur-0h IAA whole plant Original data GEO bulk
467 Tsu -Fe 48h Shoots 0.43 >More info 0.55 >More info Tsu +Fe 24h Shoots Original data GEO bulk
468 NJ15 0.35 >More info 0.63 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
469 cdkf:1-2 0.62 >More info 0.35 >More info wt seedling young seedlings Original data GEO bulk
470 35S-MIF1 light grown 0.52 >More info 0.45 >More info Light-grown WT control Original data GEO bulk
471 WT Shoot-Pi 0.54 >More info 0.43 >More info WT Shoot+Pi shoots Original data GEO bulk
472 C24 24h cold -0.57 >More info -0.40 >More info Col 24h cold leaf Original data GEO bulk
473 WT 1mM phosphate 8 hours. -0.53 >More info -0.44 >More info WT control (not supplemented). Original data
474 ced1 -0.51 >More info -0.46 >More info WT PEG 6hr seedlings Original data GEO bulk
475 Nicotinamide-77hr 0.45 >More info 0.52 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
476 npr1 sni1 brca2a SA -0.39 >More info -0.58 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
477 OsSAP11 expressing -0.43 >More info -0.54 >More info WT seedlings Original data GEO bulk
478 amiRAP aerobic -0.33 >More info -0.64 >More info WT aerobic aerobic Original data GEO bulk
479 root stele 40 mM NaCls 0.47 >More info 0.50 >More info root stele Original data GEO bulk
480 Rsch 1d 0.42 >More info 0.55 >More info Rsch CA Leaves Original data
481 seedling 1.5h after Gamma atm-1 0.56 >More info 0.40 >More info seedling day 1 unirradiated atm-1 1.5h Original data
482 HARAP aerobic -0.40 >More info -0.56 >More info WT aerobic aerobic Original data GEO bulk
483 rao1-1 3h antimycin A -0.58 >More info -0.38 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
484 Col upon hypoxia 6 hrs 0.51 >More info 0.45 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
485 Col-0 mbs1-1 HL 3h -0.57 >More info -0.39 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
486 Aerobic prt6 0.55 >More info 0.41 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
487 toc1-1-93hr 0.50 >More info 0.46 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
488 toc1-1-53hr 0.63 >More info 0.33 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
489 IRP1-OE-Ctrl--shoot 0.60 >More info 0.36 >More info COL-0-Ctrl--shoot shoot Original data
490 Methyl Jasmonate 1 h 0.44 >More info 0.52 >More info Mock 1 h Original data Basic hormone treatment of seedlings
491 TA induced 0.38 >More info 0.58 >More info Methanol TA Suspension cells Original data GEO bulk
492 1h +Pi -0.41 >More info -0.55 >More info 1h -Pi root Original data GEO bulk
493 Total RNA csp1 cold 0.44 >More info 0.52 >More info Total RNA csp1 12h cold (4C) rosettes Original data GEO bulk
494 35SpBVR3 0.46 >More info 0.50 >More info WT Original data GEO bulk
495 CHLM overexpression -0.46 >More info -0.50 >More info Col-0 estr green tissue Original data GEO bulk
496 Col-0 RNAi-MBS2/mbs1-1 HL 3h -0.37 >More info -0.59 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
497 Selenate (root) 0.40 >More info 0.55 >More info Ws (root) Original data GEO bulk
498 long 14-degree- 0.39 >More info 0.56 >More info control long Original data GEO bulk
499 Root Selenate 0.40 >More info 0.55 >More info Root control 40 micromolar selenate Root Original data GEO bulk
500 RRE2 Chitin 0.52 >More info 0.43 >More info Chitin Original data GEO bulk
501 irradiated leaf (WT 1d) 0.64 >More info 0.31 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
502 stn7-1 -0.53 >More info -0.42 >More info Col-0 rosette leaves Original data GEO bulk
503 WT 90-105 min Xanthomonas 0.35 >More info 0.60 >More info WT T0 Original data GEO bulk
504 GO5; 0h switch to ambient CO2 concentrations; -0.66 >More info -0.28 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
505 lht1 untreated 0.39 >More info 0.55 >More info WT untreated untreated leaf Original data GEO bulk
506 dark +H2O2 -0.50 >More info -0.44 >More info dark 5 mM H2O2 seedling Original data GEO bulk
507 nNOS-control 0.51 >More info 0.43 >More info WT-control leaf Original data
508 WT resupplied Pi 4h 0.53 >More info 0.41 >More info WT complete seedlings Original data
509 rosette leaves bdg 0.37 >More info 0.57 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
510 Tsu-1 -Fe 24h 0.35 >More info 0.59 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
511 Tsu -Fe 24h Roots 0.35 >More info 0.59 >More info Tsu +Fe 24h Roots Original data GEO bulk
512 Col-0 2HS 0.33 >More info 0.61 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
513 eds16 whole leaf 6hpi -0.40 >More info -0.53 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
514 9m.KNO3 0.39 >More info 0.54 >More info To. KNO3 14 day old Roots Original data GEO bulk
515 aba2 1% sucrose 12-day-old 0.52 >More info 0.41 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
516 Truncated AC2 T2 -0.54 >More info -0.38 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
517 SOS1 0mM NaCl 0.55 >More info 0.37 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
518 apum23 0.53 >More info 0.39 >More info WT (Col-3) aerial parts Original data GEO bulk
519 21h-DC3000 avrRpm1 -0.55 >More info -0.37 >More info 21h-DC3000 leaves Original data GEO bulk
520 Ambient CO2 expanding leaf -0.55 >More info -0.37 >More info Control for tissue data expanding leaf Original data
521 plant (tga2-5-6) 4h OPDA 0.50 >More info 0.42 >More info plant (tga2-5-6) 4h control Original data GEO bulk
522 phyABDE Rc50 -0.51 >More info -0.41 >More info phyABDE Dark red light whole seedling Original data GEO bulk
523 anac017-2 H2O2 3h -0.58 >More info -0.34 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
524 IAA7mII over-expressor IAA Treated 0.23 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
525 current injection 0.31 >More info 0.61 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
526 Col-0-1h IAA 0.56 >More info 0.35 >More info Col-0-0h IAA whole plant Original data GEO bulk
527 Uniconazole 12 h 0.53 >More info 0.38 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
528 express RfBP -0.57 >More info -0.34 >More info WT green part of the whole plant Original data GEO bulk
529 light -0.73 >More info -0.18 >More info dark light seedling Original data GEO bulk
530 leaf rlt1-1rlt2-1 -0.41 >More info -0.50 >More info leaf Col-0 leaf Original data GEO bulk
531 tbf1-elf18 -0.41 >More info -0.50 >More info WT-elf18 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
532 Compost 0.41 >More info 0.50 >More info Perlite Compost Original data GEO bulk
533 rpl24 total 0.52 >More info 0.38 >More info WT total seedling shoot/aerial seedling Original data
534 sicy-192 gun1-101 cotyledons 0.38 >More info 0.52 >More info WT cotyledons cotyledons Original data
535 rGRF 0.39 >More info 0.51 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
536 Atwrky63 -0.61 >More info -0.29 >More info Col0 none leaf Original data GEO bulk
537 8-DAC chr11-1chr17-1 0.55 >More info 0.34 >More info 8-DAC Col-0 leaf explants Original data
538 OE WRKY40.4 -0.63 >More info -0.26 >More info OE WRKY40.4 none leaf Original data GEO bulk
539 9m.KCl 0.36 >More info 0.53 >More info To. KCl 14 day old Roots Original data GEO bulk
540 SHR-GR Time 1H Dex 0.57 >More info 0.32 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
541 ALC Toc1 light-light Mock -0.60 >More info -0.29 >More info Col light-light Mock no ethanol Original data GEO bulk
542 RGA-GR-DEX 0.32 >More info 0.57 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
543 anac017-1 AntimycinA 3h -0.30 >More info -0.59 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
544 atgsnor1-1-avrB-6h 0.33 >More info 0.55 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
545 Lip0 UV 0.52 >More info 0.36 >More info Lip0 mock UV seedling Original data
546 Ambient CO2 leaf primordia -0.55 >More info -0.32 >More info Control for tissue data leaf primordia Original data
547 low water potential 0.54 >More info 0.33 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
548 Heat and anoxia 0.32 >More info 0.55 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
549 Rosette leaf No12 -0.51 >More info -0.36 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
550 C58 3hpi 0.37 >More info 0.50 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
551 amiR-tor induced 6d 0.37 >More info 0.50 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
552 AtMYB30-ox 90-105 min Xanthomonas 0.57 >More info 0.30 >More info WT 90-105 min Xanthomonas Original data GEO bulk
553 root epidermis and lateral root cap -S -0.53 >More info -0.33 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
554 SCR-GR Time 3H Dex 0.54 >More info 0.32 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
555 rao1-2 3h antimycin A -0.51 >More info -0.35 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
556 6-trichlorophenoxyacetic acid 3 h 0.36 >More info 0.50 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
557 CHS-silenced type -0.54 >More info -0.31 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
558 OE-HRA1 NS  0.51 >More info 0.34 >More info Col-0NS 2 h non-stress (2NS) 7-day-old seedlings Original data
559 JA 0.33 >More info 0.52 >More info Col-0 mock Whole seedling Original data GEO bulk
560 over-tAPX -0.28 >More info -0.57 >More info WT Col Original data GEO bulk
561 Rose Bengal 0.5 uM 0.24 >More info 0.61 >More info Control RB and PER Rose Bengal Original data
562 24h +Pi -0.54 >More info -0.30 >More info 24h -Pi root Original data GEO bulk
563 seedling 1.5h after HZE atm-1 0.51 >More info 0.33 >More info seedling day 1 unirradiated atm-1 1.5h Original data
564 IAA/inhibitor A Treated 0.28 >More info 0.56 >More info IAA Treated Original data GEO bulk
565 Polysomal RNA 35S:AtCSP1-FH1 0.33 >More info 0.51 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
566 AtMYB30-as 90-105 min Xanthomonas 0.32 >More info 0.52 >More info WT 90-105 min Xanthomonas Original data GEO bulk
567 Col-0 24hpi A. brassicicola 0.82 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
568 seedlings +5AC 0.51 >More info 0.32 >More info control seedlings 10-day old whole seedling Original data GEO bulk
569 WT mitomycin C 0.54 >More info 0.29 >More info WT mock shoot apical meristem Original data
570 MPK6 ox Shoot Hypoxia 0.56 >More info 0.27 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
571 toc1-1-77hr 0.71 >More info 0.12 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
572 12m.KCl 0.26 >More info 0.57 >More info To. KCl 14 day old Roots Original data GEO bulk
573 ARR21C-ox 0.51 >More info 0.31 >More info Col-0 Original data ARR21C overexpression
574 OE-HRA1 2HS  0.54 >More info 0.27 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
575 Infected pft1 leaf 0.28 >More info 0.53 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
576 Cambium 5 days NAA 0.24 >More info 0.57 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
577 Sha-3h IAA 0.54 >More info 0.26 >More info Sha-0h IAA whole plant Original data GEO bulk
578 toc1-1-69hr 0.54 >More info 0.26 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
579 cov1 cov2 stem Top -0.51 >More info -0.29 >More info WT stem Top stem Top Original data GEO bulk
580 abi1 hypocotyl 0.30 >More info 0.50 >More info Ler hypocotyl hypocotyl Original data GEO bulk
581 AFB1 0h 0.59 >More info 0.21 >More info Col 0h Leaf Original data GEO bulk
582 eds16 whole leaf 7d UI -0.51 >More info -0.28 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
583 ANOXIA -0.54 >More info -0.25 >More info ANOXIA+SUCROSE Original data GEO bulk
584 C24 UV1 -0.55 >More info -0.24 >More info C24 mock UV seedling Original data
585 roottip control p35S -0.28 >More info -0.51 >More info roottip control total control roottip Original data GEO bulk
586 coi1-PsmES4326-24hpi -0.28 >More info -0.51 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
587 AtLysM RLK1 mutant chitooctaose -0.28 >More info -0.51 >More info WT chitooctaose Original data GEO bulk
588 Hydrogen Peroxide 500 uM 0.28 >More info 0.51 >More info Control RB and PER Hydrogen Peroxide Original data
589 DUO1 induced 6h -0.58 >More info -0.21 >More info 6hr-not-induced whole plant Original data GEO bulk
590 Bay-0-30min IAA 0.53 >More info 0.25 >More info Bay-0-0h IAA whole plant Original data GEO bulk
591 Col-0 RNAi-MBS2/mbs1-1 HL 0h 0.59 >More info 0.19 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
592 IAA19mII over-expressor IAA Treated 0.28 >More info 0.50 >More info empty vector IAA Treated Original data GEO bulk
593 agb1 -ABA LF 0.26 >More info 0.52 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
594 GA 0.24 >More info 0.54 >More info none GA Rosette Original data GEO bulk
595 sng1 UV 0.57 >More info 0.21 >More info UV aerial region Original data GEO bulk
596 penta MeJA 1h 0.53 >More info 0.24 >More info Laer MeJA 1h leaf discs Original data GEO bulk
597 Methyl Jasmonate 0.5 h 0.24 >More info 0.53 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
598 Oxidative Stress 3 h (root) -0.25 >More info -0.52 >More info Stress mock 3 h (root) Original data Stress treatments
599 Anoxia 0.26 >More info 0.51 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
600 Stem tissue 2 days NAA 0.21 >More info 0.56 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
601 siliques AtHb1 control 0.25 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
602 opr3 JA 2 h 0.24 >More info 0.53 >More info opr3 0 h Original data GEO bulk
603 OE WRKY63.3 0.21 >More info 0.55 >More info OE WRKY40.4 none leaf Original data GEO bulk
604 aba1 hypocotyl 0.26 >More info 0.50 >More info Ler hypocotyl hypocotyl Original data GEO bulk
605 root cap pGL2(root cap pGL2BRI1) 0h BL 0.56 >More info 0.19 >More info WR 35S 0h BL brassinosteroid root Original data
606 HairpinZ 4 h (leaf) 0.78 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
607 SA Treated 0.67 >More info 0.08 >More info Water Original data GEO bulk
608 -Sulfate 24 h 0.24 >More info 0.51 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
609 long 12-degree- 0.25 >More info 0.50 >More info control long Original data GEO bulk
610 Chitin 0.25 >More info 0.50 >More info Col C Original data GEO bulk
611 PRR5-VP 12h light on -0.52 >More info -0.21 >More info WT 12h light on whole plant Original data GEO bulk
612 Col-0 HS 0.20 >More info 0.53 >More info Col-0 control heat shocked seedling Original data GEO bulk
613 WT (Col-0) heat shock 0.20 >More info 0.53 >More info WT (Col-0) whole seedling Original data GEO bulk
614 Shoot submergence 7h 0.72 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
615 amiRAP hypoxic -0.20 >More info -0.52 >More info hypoxic hypoxia Original data GEO bulk
616 axr2-BR -0.52 >More info -0.19 >More info BR BR dark-grown seedlings Original data GEO bulk
617 msh1 recA3 heat shock 0.19 >More info 0.52 >More info WT heat shock above-ground parts Original data GEO bulk
618 WT zebularine 5d -0.52 >More info -0.18 >More info WT mock 5d shoot apical meristem Original data
619 glk1 glk2 GLK1-GR +DEX 24h -0.64 >More info -0.06 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
620 flu dark 8hours/30 minute light 0.03 >More info 0.66 >More info col dark 8hours/30 minute light Original data GEO bulk
621 sex1-3 0.13 >More info 0.56 >More info Col-WT leaves Original data GEO bulk
622 L2.5 mutant -0.51 >More info -0.18 >More info Wt Original data GEO bulk
623 4C 1h 0.10 >More info 0.59 >More info 4C 0h Original data GEO bulk
624 tt4 -0.55 >More info -0.13 >More info WT aerial region Original data GEO bulk
625 IAA/inhibitor B Treated 0.16 >More info 0.52 >More info IAA Treated Original data GEO bulk
626 Mh0 UV -0.62 >More info -0.06 >More info Mh0 mock UV seedling Original data
627 pvip1 pvip2 seedling 0.70 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
628 msh1 recA3 untreated 0.07 >More info 0.61 >More info WT untreated above-ground parts Original data GEO bulk
629 P. infestans 6 h (leaf) 0.82 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
630 Laer Flg22(Agrobacterium) 2h -0.09 >More info -0.58 >More info Laer Control leaf discs Original data GEO bulk
631 opr3 JA 0.5 h -0.05 >More info 0.71 >More info opr3 0 h Original data GEO bulk
632 ptpks2 -0.53 >More info -0.12 >More info Col-WT leaves Original data GEO bulk
633 root cap pGL2 0h BL 0.55 >More info 0.10 >More info WR 35S 0h BL brassinosteroid root Original data
634 cov1 cov2 stem Base 0.50 >More info 0.15 >More info WT stem Base stem Base Original data GEO bulk
635 30m light -0.50 >More info -0.14 >More info before light whole seedlings Original data GEO bulk
636 AAF-OX 0.51 >More info 0.13 >More info Col-0 Rosette leaf Original data GEO bulk
637 AVG 3 h -0.09 >More info -0.55 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
638 JA 3h 0.09 >More info 0.55 >More info EtOH 3h 3hr Original data GEO bulk
639 Protoplast Induced 0.07 >More info 0.56 >More info Uninduced Original data GEO bulk
640 WT 3H Cold 0.07 >More info 0.56 >More info WT control Original data GEO bulk
641 Col-0 DCA 6d 0.66 >More info -0.03 >More info Col-0 MOCK 6d Original data GEO bulk
642 Ambient CO2 LIMITING N DAY 0.58 >More info 0.05 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
643 Col PSTDC3000 24h 0.75 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
644 ein2 1% sucrose 14-day-old -0.02 >More info -0.59 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
645 arr10 arr12 -0.52 >More info -0.08 >More info DMSO--WT DMSO roots Original data GEO bulk
646 wnk8-1 untreated -0.10 >More info -0.50 >More info Col-0 untreated seedlings Original data GEO bulk
647 t-zeatin 0.5 h -0.04 >More info -0.54 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
648 3x(m) 0.04 >More info 0.53 >More info 2x two week old seedlings Original data
649 FLIGHT TAGESB plate 0.57 >More info -0.00 >More info GROUND CONTROL TAGESB plate Original data
650 harboring empty vector+CHX -0.51 >More info -0.05 >More info harboring empty vector+DEX +CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
651 Constans-mutant 0.53 >More info 0.03 >More info Col control above-ground whole plant Original data GEO bulk
652 seedling 3h after HZE WT 0.54 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
653 ex2 flu dark 8hours/30 minute light 0.02 >More info 0.53 >More info col dark 8hours/30 minute light Original data GEO bulk
654 WT-Dry 0.00 >More info 0.54 >More info WT-CK dehydration treatment 1h Original data
655 Leaf wounded -0.07 >More info 0.59 >More info Leaf control vegetative leaf Original data GEO bulk
656 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
657 Mock pft1 leaf -0.08 >More info 0.58 >More info Mock Col-0 leaf water leaf Original data GEO bulk
658 FarRed Light 45min 0.01 >More info -0.50 >More info White Light 45min Original data Light treatments
659 2xX6x interploidy cross -0.02 >More info 0.51 >More info 2xX2x cross Original data GEO bulk
660 FAMA induced 4h 0.04 >More info -0.51 >More info control 4h Whole seedling Original data GEO bulk
661 seed germinating in countinuous light 24h SL -0.20 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
662 Red/FR Light45min -0.22 >More info 0.68 >More info FarRed Light 45min Original data Light treatments
663 WT Red light 1h 0.52 >More info -0.12 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
664 G3P 0.52 >More info -0.13 >More info Mock distal leaves Original data GEO bulk
665 WT NAA 1h 0.58 >More info -0.24 >More info WT 0h Leaf tissue Original data GEO bulk
666 Shoot apex inflorescence (after bolting) -0.48 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
667 bri1-116 -0.56 >More info 0.73 >More info Col seedling Original data GEO bulk
668 Light 3day hml -0.58 >More info 0.52 >More info 0h hml Original data