4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Col upon hypoxia 6 hrs
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List of experiments correlated with "Col upon hypoxia 6 hrs"  Help Download transcriptome of top 30
Score Experiment Correlation from
Col upon hypoxia 6 hrs		 Correlation to
Col upon hypoxia 6 hrs		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Col upon hypoxia 6 hrs 1.00 >More info 1.00 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
2 Col-0 wt Hypoxic 0.73 >More info 0.85 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
3 P.p 2.5hai 0.78 >More info 0.77 >More info At-Control roots Original data GEO bulk
4 root - 01% oxygen - 2h 0.67 >More info 0.84 >More info root - 21% oxygen - 2h Original data GEO bulk
5 root hypoxia total 0.68 >More info 0.82 >More info root control total Original data GEO bulk
6 roottip hypoxia total 0.64 >More info 0.86 >More info roottip control total Original data GEO bulk
7 Col-0 low oxygen 0.71 >More info 0.78 >More info Col-0 control low oxygen root Original data GEO bulk
8 P.p 6hai 0.76 >More info 0.71 >More info At-Control roots Original data GEO bulk
9 CeO2 germinant -0.66 >More info -0.78 >More info Millipore Water germinant CeO2 seedling Original data
10 AgNO3 3 h 0.63 >More info 0.77 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
11 P.p 10.5hai 0.73 >More info 0.65 >More info At-Control roots Original data GEO bulk
12 root - 01% oxygen - 48h 0.49 >More info 0.87 >More info root - 21% oxygen - 48h Original data GEO bulk
13 9 hr Hypoxia Total RNA 0.66 >More info 0.69 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
14 root - 04% oxygen - 48h 0.48 >More info 0.87 >More info root - 21% oxygen - 48h Original data GEO bulk
15 9 hr Hypoxia 1 hr recovery Total RNA 0.65 >More info 0.68 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
16 WT Root Hypoxia 0.48 >More info 0.84 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
17 Col-0 2HS 0.56 >More info 0.75 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
18 whole roots -Fe 72 hour 0.62 >More info 0.66 >More info whole roots standard Original data GEO bulk
19 Fe starvation 72 h 0.62 >More info 0.66 >More info Control Original data GEO bulk
20 Tsu -Fe 24h Roots 0.59 >More info 0.69 >More info Tsu +Fe 24h Roots Original data GEO bulk
21 Tsu-1 -Fe 24h 0.59 >More info 0.69 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
22 Whole root - low pH 12H 0.58 >More info 0.69 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
23 MPK6 ox Shoot Hypoxia 0.48 >More info 0.79 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
24 Col-0 V. longisporum-inoculated 48 hpi 0.54 >More info 0.72 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
25 seedlings-week-old RECA1-overexpressing
transgenic		 0.58 >More info 0.68 >More info seedlings-week-old Col-0 seedlings Original data
26 MPK6 ox Root Hypoxia 0.52 >More info 0.74 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
27 ani1 T16 -0.69 >More info -0.57 >More info WT T16 root tissue Original data GEO bulk
28 2 hr Hypoxia Total RNA 0.55 >More info 0.70 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
29 TNT-seedlings 0.53 >More info 0.72 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
30 P.p 30hai 0.63 >More info 0.61 >More info At-Control roots Original data GEO bulk
31 9m.KCl 0.53 >More info 0.69 >More info To. KCl 14 day old Roots Original data GEO bulk
32 9 hr Hypoxia 1 hr recovery IP RNA 0.61 >More info 0.61 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
33 whole roots -Fe 48 hour 0.58 >More info 0.63 >More info whole roots standard Original data GEO bulk
34 5-Triiodobenzoic acid3 h 0.48 >More info 0.73 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
35 Aerobic e1 ate2 0.40 >More info 0.80 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
36 9 hr Hypoxia IP RNA 0.60 >More info 0.59 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
37 Selenate (root) 0.57 >More info 0.62 >More info Ws (root) Original data GEO bulk
38 Root Selenate 0.57 >More info 0.62 >More info Root control 40 micromolar selenate Root Original data GEO bulk
39 Cycloheximide 3 h 0.58 >More info 0.61 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
40 ARR22-ox (t-zeatin 3 h) 0.60 >More info 0.57 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
41 WT Shoot Hypoxia 0.39 >More info 0.78 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
42 IAA 4h 0.62 >More info 0.54 >More info control 4h root Original data GEO bulk
43 ani1 T0.5 -0.49 >More info -0.67 >More info WT T0.5 root tissue Original data GEO bulk
44 seedlings protease IV 0.57 >More info 0.59 >More info seedlings nontreated control whole seedling Original data
45 TiO2 germinant -0.62 >More info -0.52 >More info Millipore Water germinant TiO2 seedling Original data
46 SCR-GR Time 1H Dex 0.51 >More info 0.63 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
47 Aerobic prt6 0.40 >More info 0.74 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
48 shoot hypoxia total 0.39 >More info 0.74 >More info shoot control total Original data GEO bulk
49 DFPM 0.60 >More info 0.52 >More info control Original data GEO bulk
50 WT 2-4h Xanthomonas 0.47 >More info 0.65 >More info WT T0 Original data GEO bulk
51 toc1-1-65hr 0.53 >More info 0.58 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
52 root - 04% oxygen - 2h 0.19 >More info 0.90 >More info root - 21% oxygen - 2h Original data GEO bulk
53 hrpA 7h 0.46 >More info 0.63 >More info Mock 7h hrpA Original data GEO bulk
54 pepr1-1 Pepr2-3 +Pep2 2h -0.50 >More info -0.59 >More info WT +Pep2 2h Pep2 Original data GEO bulk
55 oligomycin 1 h 0.51 >More info 0.58 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
56 SA 0.48 >More info 0.61 >More info WT mock Whole seedling Original data GEO bulk
57 Seedling KUA1-IOX est 0.54 >More info 0.54 >More info Seedling KUA1-IOX mock Original data
58 E.coli TUV86 2 fliC 7h 0.47 >More info 0.61 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
59 col-5 hrpA 12h 0.43 >More info 0.65 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
60 toc1-1-49hr 0.44 >More info 0.63 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
61 IAA 2h 0.57 >More info 0.50 >More info control 2h root Original data GEO bulk
62 Laer pretreat GA Flg22 1h 0.36 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
63 hrpA fliC 7h 0.38 >More info 0.69 >More info Mock 7h hrpA fliC Original data GEO bulk
64 oligomycin 4 h 0.52 >More info 0.54 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
65 WT 30μM arsenate 8 hours. 0.50 >More info 0.56 >More info WT control (not supplemented). Original data
66 GST NPP1 4 h (leaf) 0.48 >More info 0.58 >More info Mock 4 h (leaf) Original data Elicitor treatments
67 root protoplasts 40 mM NaCl 0.48 >More info 0.58 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
68 Laer Flg22 2h 0.50 >More info 0.55 >More info Laer Control leaf discs Original data GEO bulk
69 GST 4 h (leaf) 0.42 >More info 0.63 >More info Mock 4 h (leaf) Original data Elicitor treatments
70 WT+H2O2 0.42 >More info 0.63 >More info WT H2O2 Original data GEO bulk
71 Laer Flg22 1h 0.51 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
72 Col-0 Flg22 4h 0.34 >More info 0.70 >More info Col-0 H2O 4h Original data GEO bulk
73 anac017-2 AntimycinA 3h -0.48 >More info -0.56 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
74 Cor hrpS 10h 0.41 >More info 0.63 >More info Mock 10h Cor hrpS Original data GEO bulk
75 col-5 DC3000-avrRpm 4h 0.44 >More info 0.60 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
76 KCl germinant -0.62 >More info -0.41 >More info Millipore Water germinant KCl seedling Original data
77 R. solani AG8 0.52 >More info 0.51 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
78 Anoxia 0.32 >More info 0.71 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
79 WT 3h -P 0.41 >More info 0.62 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
80 Light 0.35 >More info 0.68 >More info Control Original data GEO bulk
81 SCR-GR Time 12H Dex 0.50 >More info 0.52 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
82 Nicotinamide-73hr 0.45 >More info 0.57 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
83 root longitudinal zone-4 pH 4.6 0.49 >More info 0.53 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
84 WT chitooctaose 0.49 >More info 0.53 >More info WT water Original data GEO bulk
85 35S:PCO1 hypoxia -0.35 >More info -0.67 >More info WT hypoxia whole rosette Original data
86 Laer Flg22+GA 1h 0.50 >More info 0.51 >More info Laer Control leaf discs Original data GEO bulk
87 P35S:rGRF3 0.58 >More info 0.43 >More info WS Original data GEO bulk
88 Nicotinamide-81hr 0.48 >More info 0.53 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
89 0.125 mM gold 24 h 0.49 >More info 0.52 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
90 root Dosed gold 0.49 >More info 0.52 >More info root No gold .125 mM gold 24 h roots Original data
91 Chemically 0.34 >More info 0.67 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
92 hira-root -0.56 >More info -0.44 >More info WT-root root Original data
93 Root submergence 24h 0.57 >More info 0.43 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
94 LTN008-2 aza-dc 0.54 >More info 0.46 >More info LTN012-2 Mock Original data
95 Flagellin 4 h (leaf) 0.40 >More info 0.60 >More info Mock 4 h (leaf) Original data Elicitor treatments
96 Mutant arf2 (etiol) 0.48 >More info 0.52 >More info Col (etiol) Original data GEO bulk
97 arf2 mock 0.48 >More info 0.52 >More info Col mock Original data GEO bulk
98 35S::ERF104 Flg22 4h 0.42 >More info 0.58 >More info 35S::ERF104 H2O 4h Original data GEO bulk
99 toc1-1-81hr 0.43 >More info 0.57 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
100 15m.KCl 0.49 >More info 0.51 >More info To. KCl 14 day old Roots Original data GEO bulk
101 gun1gun5 far-red pretreated -0.35 >More info -0.65 >More info WT far-red pretreated Original data GEO bulk
102 col-5 hrpA 4h 0.42 >More info 0.58 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
103 Col BTH 0.33 >More info 0.67 >More info Col rosettes Original data GEO bulk
104 IAA 0.5h 0.44 >More info 0.56 >More info control 0.5h root Original data GEO bulk
105 seedlings + TSA 0.59 >More info 0.40 >More info control seedlings 10-day old whole seedling Original data GEO bulk
106 toc1-1-61hr 0.52 >More info 0.47 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
107 Light 3day wt -0.35 >More info -0.64 >More info 0h wt Original data
108 SA 4mM 0.30 >More info 0.69 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
109 CMP 4hr 0.48 >More info 0.51 >More info Acetone 4hr root Original data GEO bulk
110 del1-1 mutant 5d uninfected 0.35 >More info 0.64 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
111 Col-0 Root 100 mM ATP 30 min 0.51 >More info 0.47 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
112 WT flg22 2h 0.53 >More info 0.45 >More info WT 0h Leaf tissue Original data GEO bulk
113 inhibitor A Treated 0.39 >More info 0.59 >More info Negative Control Original data GEO bulk
114 toc1-1-53hr 0.45 >More info 0.53 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
115 Col-Luc WT 3h antimycin A 0.45 >More info 0.53 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
116 E.coli 0157 H7 7h 0.39 >More info 0.59 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
117 Cocultivation 8 hrs root 0.48 >More info 0.50 >More info Mock cocultivation 8 hrs root Root Original data
118 root - 08% oxygen - 2h 0.15 >More info 0.82 >More info root - 21% oxygen - 2h Original data GEO bulk
119 ahg2-1sid2-2 0.45 >More info 0.52 >More info WT (Col) control Original data GEO bulk
120 WT flg22 1h 0.46 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
121 WT NAA/flg 1h 0.46 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
122 efr-1 +elf18 10h -0.45 >More info -0.52 >More info WT +elf18 10h elf18 Original data GEO bulk
123 Col-0 low oxygen 0.50 >More info 0.46 >More info Col-0 Original data GEO bulk
124 miR393 0h -0.34 >More info -0.62 >More info WT 0h Leaf tissue Original data GEO bulk
125 hrcC 0.38 >More info 0.58 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
126 slr-1 0h NAA 0.33 >More info 0.63 >More info Col-0 0h NAA Original data GEO bulk
127 Col ozone 3h 0.36 >More info 0.60 >More info Col clean-air 3h ozone Original data GEO bulk
128 WT seedlings MV 0.41 >More info 0.55 >More info WT seedlings control Seedlings Original data GEO bulk
129 sid2-2 9 hpi A. brassicicola 0.44 >More info 0.52 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
130 ein2-1 9 hpi A. brassicicola 0.43 >More info 0.53 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
131 Col-0 9 hpi A. brassicicola 0.45 >More info 0.51 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
132 Rose Bengal 0.5 uM 0.28 >More info 0.67 >More info Control RB and PER Rose Bengal Original data
133 TA induced 0.41 >More info 0.54 >More info Methanol TA Suspension cells Original data GEO bulk
134 toc1-1-85hr 0.42 >More info 0.53 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
135 Nicotinamide-61hr 0.45 >More info 0.50 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
136 bak1-3 +Pep2 10h 0.41 >More info 0.54 >More info WT +Pep2 10h Pep2 Original data GEO bulk
137 col-5 DC3000 4h 0.32 >More info 0.63 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
138 dde2-2 9 hpi A. brassicicola 0.44 >More info 0.51 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
139 Col whole leaf 7dpi 0.40 >More info 0.54 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
140 toc1-1-69hr 0.51 >More info 0.43 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
141 Lipopolysaccaride4 h (leaf) 0.34 >More info 0.60 >More info Mock 4 h (leaf) Original data Elicitor treatments
142 WT+chitooctaose 0.37 >More info 0.57 >More info WT+water chitooctaose seedlings Original data GEO bulk
143 shoots bhlh100/101 100uM Fe 0.41 >More info 0.53 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
144 PNO8 3 h 0.53 >More info 0.40 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
145 root - 01% oxygen - 30min 0.17 >More info 0.76 >More info root - 21% oxygen - 30min Original data GEO bulk
146 atmyc2 cop1 Seedling Dark 0.52 >More info 0.41 >More info WT Seedling Dark Original data GEO bulk
147 NAA 6h 0.52 >More info 0.41 >More info before treatment NAA root Original data GEO bulk
148 Norflurazon 0.52 >More info 0.41 >More info Col-0 Original data GEO bulk
149 Norflurazon 0.52 >More info 0.41 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
150 Bur-0-30min IAA 0.52 >More info 0.41 >More info Bur-0h IAA whole plant Original data GEO bulk
151 flu 0.33 >More info 0.60 >More info WT Col Original data GEO bulk
152 ataf1-1 mutant Col-0 Bgh inoculated 0.43 >More info 0.50 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
153 C58 3hpi 0.30 >More info 0.63 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
154 Nicotinamide-53hr 0.43 >More info 0.50 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
155 chito-tetramer 0.42 >More info 0.51 >More info Col Mock Original data GEO bulk
156 wavy 0.43 >More info 0.50 >More info WT Original data GEO bulk
157 col-5 hrpA 2h 0.35 >More info 0.58 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
158 bbx24 in Simulated Shade -0.39 >More info -0.53 >More info WT in simulated shade shade seedling Original data
159 gai Control 0.50 >More info 0.42 >More info Laer Control leaf discs Original data GEO bulk
160 coi1-16 ein2 sid2 ctrl -0.51 >More info -0.41 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
161 ABA 1 h -0.22 >More info -0.70 >More info Mock 1 h Original data Basic hormone treatment of seedlings
162 Whole root - low pH 24H 0.52 >More info 0.39 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
163 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.52 >More info 0.39 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
164 plant (tga2-5-6) 4h phytoprostane A1 0.38 >More info 0.53 >More info plant (tga2-5-6) 4h control Original data GEO bulk
165 IAA/inhibitor A Treated 0.40 >More info 0.51 >More info IAA Treated Original data GEO bulk
166 IMI 4mM 0.35 >More info 0.56 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
167 flu over-tAPX 0.32 >More info 0.59 >More info WT Col Original data GEO bulk
168 WT-NOCO2 INFECTED 0.41 >More info 0.50 >More info WT-MOCK Original data GEO bulk
169 WT 90-105 min Xanthomonas 0.32 >More info 0.59 >More info WT T0 Original data GEO bulk
170 S15-118 0.36 >More info 0.54 >More info wt Original data GEO bulk
171 Triazolopyrimidine EC50 0.39 >More info 0.51 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
172 toc1-1-77hr 0.58 >More info 0.32 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
173 Col0-PsmES4326-24hpi 0.29 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
174 oas-a1.1 Cd 18h 0.50 >More info 0.39 >More info Cd 18h root Root Original data GEO bulk
175 Infected pft1 leaf 0.35 >More info 0.54 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
176 safener treated 0.36 >More info 0.53 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
177 2 hr Hypoxia IP RNA 0.36 >More info 0.53 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
178 CT101 ozone 0.51 >More info 0.37 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
179 Stem tissue 5 days NAA 0.37 >More info 0.51 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
180 Col-0 HS 0.27 >More info 0.61 >More info Col-0 control heat shocked seedling Original data GEO bulk
181 WT (Col-0) heat shock 0.27 >More info 0.61 >More info WT (Col-0) whole seedling Original data GEO bulk
182 mpk6-ko Flg22 4h 0.29 >More info 0.59 >More info mpk6-ko H2O 4h Original data GEO bulk
183 S58-2 0.32 >More info 0.55 >More info wt Original data GEO bulk
184 seedlings +5AC 0.51 >More info 0.36 >More info control seedlings 10-day old whole seedling Original data GEO bulk
185 glk1 glk2 GLK1-GR +DEX 24h -0.50 >More info -0.37 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
186 Phaseolicola 2 h (leaf) 0.29 >More info 0.58 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
187 Col whole leaf 5dpi 0.34 >More info 0.52 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
188 Cor 24h 0.33 >More info 0.53 >More info Mock 24h Cor Original data GEO bulk
189 IAA 0h -0.53 >More info -0.32 >More info control 0h root Original data GEO bulk
190 tunicamycin -0.32 >More info -0.53 >More info DMF Original data GEO bulk
191 Heat shock optimum 0.20 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
192 35S::PI ap3-3 35S::AP-GR +DEX 0.31 >More info 0.54 >More info 0hr DEX Original data GEO bulk
193 columella auxin 0.29 >More info 0.56 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
194 root - 08% oxygen - 48h 0.09 >More info 0.76 >More info root - 21% oxygen - 48h Original data GEO bulk
195 wrky33 Bc inoculation 14h 0.51 >More info 0.33 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
196 Octopus overexpressor 35SDYG25 0.33 >More info 0.51 >More info WS Original data GEO bulk
197 erf104-ko Flg22 4h 0.28 >More info 0.56 >More info erf104-ko H2O 4h Original data GEO bulk
198 rcf1-1 cold 24h 0.31 >More info 0.53 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
199 WT AntimycinA 3h 0.32 >More info 0.52 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
200 camta1/3 warm 0.32 >More info 0.52 >More info WT warm entire aerial part Original data GEO bulk
201 pericycle auxin 0.33 >More info 0.51 >More info pericycle control 5 uM indole-3-acetic acid pericycle Original data GEO bulk
202 2hr transitory KNO3 PrR cell 0.26 >More info 0.58 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
203 IAA/inhibitor B Treated 0.29 >More info 0.54 >More info IAA Treated Original data GEO bulk
204 bri1-116 0.10 >More info 0.73 >More info Col seedling Original data GEO bulk
205 aba1 hypocotyl 0.27 >More info 0.55 >More info Ler hypocotyl hypocotyl Original data GEO bulk
206 Root submergence 7h 0.52 >More info 0.29 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
207 Fe starvation 3 h 0.19 >More info 0.62 >More info Control Original data GEO bulk
208 whole roots -Fe 3 hour 0.19 >More info 0.62 >More info whole roots standard Original data GEO bulk
209 sta1 0.53 >More info 0.27 >More info WT Original data GEO bulk
210 1h +Pi -0.30 >More info -0.50 >More info 1h -Pi root Original data GEO bulk
211 Leafminer damaged seedlings 0.24 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
212 35S:RPS4 eds1-2 2h -0.27 >More info -0.53 >More info 35S:RPS4 2h leaves Original data
213 P.syringae AvrRpt2 4 h (leaf) 0.16 >More info 0.63 >More info Mock 4 h (leaf) Original data Elicitor treatments
214 Ws HS 0.28 >More info 0.51 >More info Ws control heat shocked seedling Original data GEO bulk
215 sni1 0.29 >More info 0.50 >More info WT Original data GEO bulk
216 WT seedlings NaCl -0.26 >More info -0.53 >More info WT seedlings control Seedlings Original data GEO bulk
217 Elevated CO2 leaf primordia 0.28 >More info 0.51 >More info Ambient CO2 leaf primordia leaf primordia Original data
218 root - 04% oxygen - 30min -0.03 >More info 0.82 >More info root - 21% oxygen - 30min Original data GEO bulk
219 Shoot -Cs 0.20 >More info 0.58 >More info Control-shoot Original data GEO bulk
220 rgs1+no sugars -0.08 >More info -0.69 >More info WT+no sugars rosette leaves Original data GEO bulk
221 WT roots - Fe 0.53 >More info 0.23 >More info WT roots + Fe Roots Original data GEO bulk
222 Blue Light 45 min -0.02 >More info -0.74 >More info White Light 45min Original data Light treatments
223 Col-0 DCA 48h 0.23 >More info 0.53 >More info Col-0 MOCK 48h Original data GEO bulk
224 Whole root - low pH 1H 0.19 >More info 0.57 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
225 GO5; 8h switch to ambient CO2 concentrations; 0.26 >More info 0.50 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
226 T6 leaf-drought -0.24 >More info -0.51 >More info T6 leaf-well watered Original data GEO bulk
227 IAA7mII over-expressor IAA Treated 0.06 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
228 SA 24h 0.12 >More info 0.63 >More info EtOH 24h 24hr Original data GEO bulk
229 bak1-3 +Pep2 2h 0.24 >More info 0.51 >More info WT +Pep2 2h Pep2 Original data GEO bulk
230 4C 1h 0.21 >More info 0.54 >More info 4C 0h Original data GEO bulk
231 bHLH122 ox -0.21 >More info -0.53 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
232 Protoplast Induced 0.16 >More info 0.57 >More info Uninduced Original data GEO bulk
233 Whole root - low pH 3H 0.18 >More info 0.55 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
234 seed germinating in countinuous light 24h SL 0.06 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
235 pmr5 0.21 >More info 0.52 >More info Col-0 rosette Original data GEO bulk
236 Col-0 RNAi-MBS2/mbs1-1 HL 3h -0.20 >More info -0.53 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
237 flu dark 8hours/30 minute light 0.20 >More info 0.51 >More info col dark 8hours/30 minute light Original data GEO bulk
238 cat2-2; 8h switch to ambient CO2 concentrations; 0.21 >More info 0.50 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
239 Leaf wounded 0.16 >More info 0.54 >More info Leaf control vegetative leaf Original data GEO bulk
240 opr3 OPDA 2 h 0.08 >More info 0.62 >More info opr3 0 h Original data GEO bulk
241 mdh -0.18 >More info -0.52 >More info Col Original data GEO bulk
242 abi1 hypocotyl 0.11 >More info 0.59 >More info Ler hypocotyl hypocotyl Original data GEO bulk
243 siliques AtHb1 control 0.17 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
244 Heat and anoxia 0.19 >More info 0.50 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
245 pepr1-1 Pepr2-3 untreated 0.12 >More info 0.57 >More info WT untreated untreated Original data GEO bulk
246 Seedling-HeatStressed POLYSOMESmRNA 0.16 >More info 0.51 >More info Seedling-control POLYSOMESmRNA seedling Original data
247 agb1 -ABA GC -0.14 >More info -0.51 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
248 20m.KCl -0.12 >More info -0.50 >More info To. KCl 14 day old Roots Original data GEO bulk
249 Cs root 0.05 >More info -0.66 >More info control root Original data GEO bulk
250 Shoot apex inflorescence (after bolting) -0.05 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
251 tt4 UV -0.01 >More info -0.58 >More info UV aerial region Original data GEO bulk
252 root - 08% oxygen - 30min -0.26 >More info 0.81 >More info root - 21% oxygen - 30min Original data GEO bulk
253 CCA1-ox 6am non-polysomal 0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
254 myb3 myb3r4d -0.01 >More info 0.50 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
255 WT 3H Cold -0.04 >More info 0.50 >More info WT control Original data GEO bulk
256 Red/FR Light45min -0.36 >More info 0.58 >More info FarRed Light 45min Original data Light treatments