4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on columella auxin
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List of experiments correlated with "columella auxin"  Help Download transcriptome of top 30
Score Experiment Correlation from
columella auxin		 Correlation to
columella auxin		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 columella auxin 1.00 >More info 1.00 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
2 epidermis auxin 0.93 >More info 0.92 >More info epidermis control 5 uM indole-3-acetic acid epidermis Original data GEO bulk
3 pericycle auxin 0.88 >More info 0.87 >More info pericycle control 5 uM indole-3-acetic acid pericycle Original data GEO bulk
4 stele auxin 0.85 >More info 0.83 >More info stele control 5 uM indole-3-acetic acid stele Original data GEO bulk
5 IAA 0.5h 0.64 >More info 0.71 >More info control 0.5h root Original data GEO bulk
6 Chemically 0.64 >More info 0.68 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
7 C24-1h IAA 0.67 >More info 0.62 >More info C24-0h IAA whole plant Original data GEO bulk
8 IAA 2h 0.61 >More info 0.67 >More info control 2h root Original data GEO bulk
9 IAA 0.5 h 0.59 >More info 0.68 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
10 roots IAA 0.64 >More info 0.61 >More info roots mock Original data GEO bulk
11 IAA 1 h 0.58 >More info 0.66 >More info Mock 1 h Original data Basic hormone treatment of seedlings
12 Whole root - low pH 12H 0.66 >More info 0.56 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
13 IAA 3 h 0.50 >More info 0.67 >More info Mock 3 h Original data Basic hormone treatment of seedlings
14 Fei-0-1h IAA 0.53 >More info 0.63 >More info Fei-0-0h IAA whole plant Original data GEO bulk
15 root stele pH4.6 0.60 >More info 0.56 >More info root stele pH5.7 Original data GEO bulk
16 Mutant arf19-1 (IAA) -0.59 >More info -0.57 >More info Col (IAA) Original data GEO bulk
17 intact root auxin 0.67 >More info 0.48 >More info intact root control 5 uM indole-3-acetic acid whole root Original data GEO bulk
18 TNT-seedlings 0.50 >More info 0.64 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
19 root epidermis and lateral root cap pH4.6 0.55 >More info 0.59 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
20 WT seedlings IAA 0.39 >More info 0.75 >More info WT seedlings control Seedlings Original data GEO bulk
21 Mutant arf2-6 (IAA) 0.66 >More info 0.46 >More info Col (IAA) Original data GEO bulk
22 C24-3h IAA 0.62 >More info 0.50 >More info C24-0h IAA whole plant Original data GEO bulk
23 Bur-0-1h IAA 0.61 >More info 0.50 >More info Bur-0h IAA whole plant Original data GEO bulk
24 root hypoxia total 0.61 >More info 0.49 >More info root control total Original data GEO bulk
25 aux1 mutant roots air -0.63 >More info -0.46 >More info roots IAA Original data GEO bulk
26 Fei-0-3h IAA 0.52 >More info 0.57 >More info Fei-0-0h IAA whole plant Original data GEO bulk
27 root Dosed gold 0.62 >More info 0.45 >More info root No gold .125 mM gold 24 h roots Original data
28 0.125 mM gold 24 h 0.62 >More info 0.45 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
29 toc1-1-85hr 0.49 >More info 0.58 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
30 bbx24 in Simulated Shade -0.61 >More info -0.45 >More info WT in simulated shade shade seedling Original data
31 IAA 4h 0.60 >More info 0.46 >More info control 4h root Original data GEO bulk
32 root cells epidermis 140mM NaCl 48 hours 0.55 >More info 0.51 >More info root cells epidermis standard 1 hour root cells epidermis Original data
33 root cells endodermis 140mM NaCl 48 hours 0.61 >More info 0.45 >More info root cells endodermis standard 1 hour root cells endodermis Original data
34 IAA 1h 0.32 >More info 0.74 >More info control 1h root Original data GEO bulk
35 phr1 Shoot-Pi 0.62 >More info 0.43 >More info WT Root-Pi shoots Original data GEO bulk
36 5-Triiodobenzoic acid3 h 0.54 >More info 0.51 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
37 Whole root - low pH 3H 0.48 >More info 0.57 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
38 Whole root - low pH 24H 0.59 >More info 0.45 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
39 OXUPB1-2 meristematic zone 0.66 >More info 0.37 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
40 roottip hypoxia total 0.49 >More info 0.53 >More info roottip control total Original data GEO bulk
41 WT NAA 2h 0.38 >More info 0.64 >More info WT 0h Leaf tissue Original data GEO bulk
42 Fei-0-30min IAA 0.49 >More info 0.53 >More info Fei-0-0h IAA whole plant Original data GEO bulk
43 Col-0 low oxygen 0.59 >More info 0.42 >More info Col-0 control low oxygen root Original data GEO bulk
44 T101D 10mM NH4NO3 -0.54 >More info -0.47 >More info col 10mM NH4NO3 Root Original data
45 Bay-0-1h IAA 0.43 >More info 0.58 >More info Bay-0-0h IAA whole plant Original data GEO bulk
46 root epidermis and lateral root cap -S 0.59 >More info 0.41 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
47 root cells epidermis 140mM NaCl 3 hours 0.48 >More info 0.52 >More info root cells epidermis standard 1 hour root cells epidermis Original data
48 root cells epidermis 140mM NaCl 8 hours 0.50 >More info 0.49 >More info root cells epidermis standard 1 hour root cells epidermis Original data
49 root cells epidermis 140mM NaCl 32 hours 0.51 >More info 0.48 >More info root cells epidermis standard 1 hour root cells epidermis Original data
50 afb3-1 2h KNO3 0.32 >More info 0.67 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
51 8hr-pH4.5 0.51 >More info 0.47 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
52 Bur-0-3h IAA 0.55 >More info 0.43 >More info Bur-0h IAA whole plant Original data GEO bulk
53 Bur-0-30min IAA 0.67 >More info 0.31 >More info Bur-0h IAA whole plant Original data GEO bulk
54 Sha-1h IAA 0.45 >More info 0.53 >More info Sha-0h IAA whole plant Original data GEO bulk
55 SA 0.53 >More info 0.44 >More info WT mock Whole seedling Original data GEO bulk
56 FarRed Light 45min 0.32 >More info 0.65 >More info White Light 45min Original data Light treatments
57 root cells stele 140mM NaCl 3 hours 0.51 >More info 0.44 >More info root cells stele standard 1 hour root cells stele Original data
58 upb1-1 elongation zone -0.56 >More info -0.38 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
59 root cells endodermis 140mM NaCl 32 hours 0.55 >More info 0.38 >More info root cells endodermis standard 1 hour root cells endodermis Original data
60 6h +Pi -0.55 >More info -0.38 >More info 6h -Pi root Original data GEO bulk
61 root cells endodermis 140mM NaCl 3 hours 0.53 >More info 0.39 >More info root cells endodermis standard 1 hour root cells endodermis Original data
62 root cells endodermis 140mM NaCl 20 hours 0.53 >More info 0.39 >More info root cells endodermis standard 1 hour root cells endodermis Original data
63 root cells endodermis 140mM NaCl 8 hours 0.54 >More info 0.38 >More info root cells endodermis standard 1 hour root cells endodermis Original data
64 1.5 hr ammonium 0.54 >More info 0.38 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
65 root cells stele 140mM NaCl 48 hours 0.51 >More info 0.41 >More info root cells stele standard 1 hour root cells stele Original data
66 dicamba 0.61 >More info 0.31 >More info WT mock whole seedling Original data GEO bulk
67 Col-0 wt Hypoxic 0.53 >More info 0.38 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
68 Heat shock optimum 0.26 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
69 whole roots 140 mM NaCl 30 minutes 0.40 >More info 0.51 >More info whole roots standard Original data GEO bulk
70 whole roots -Fe 72 hour 0.58 >More info 0.33 >More info whole roots standard Original data GEO bulk
71 hira-root -0.57 >More info -0.34 >More info WT-root root Original data
72 Fe starvation 72 h 0.58 >More info 0.33 >More info Control Original data GEO bulk
73 root cells stele 140mM NaCl 8 hours 0.50 >More info 0.40 >More info root cells stele standard 1 hour root cells stele Original data
74 IAA 8h 0.53 >More info 0.37 >More info control 8h root Original data GEO bulk
75 NaCl cpctry 0.53 >More info 0.37 >More info NaCl Col Original data GEO bulk
76 Control KNO3 roots - 8hours 0.40 >More info 0.50 >More info Control KCl roots - 8hours 5mM KNO3 on both sides for 8 hours roots Original data GEO bulk
77 Cocultivation 8 hrs root 0.52 >More info 0.37 >More info Mock cocultivation 8 hrs root Root Original data
78 GR-bdl DEX IAA -0.30 >More info -0.59 >More info GR-bdl IAA Original data GEO bulk
79 WT NAA 1h 0.31 >More info 0.57 >More info WT 0h Leaf tissue Original data GEO bulk
80 Col BTH 0.20 >More info 0.67 >More info Col rosettes Original data GEO bulk
81 IAA Treated 0.28 >More info 0.59 >More info Negative Control Original data GEO bulk
82 Whole root - low pH 1H 0.17 >More info 0.70 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
83 Tsu -Fe 24h Roots 0.56 >More info 0.30 >More info Tsu +Fe 24h Roots Original data GEO bulk
84 R. solani AG8 0.56 >More info 0.30 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
85 Tsu-1 -Fe 24h 0.56 >More info 0.30 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
86 root cells cortex 140mM NaCl 32 hours 0.51 >More info 0.34 >More info root cells cortex standard 1 hour root cells cortex Original data
87 Col upon hypoxia 6 hrs 0.56 >More info 0.29 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
88 root cells cortex 140mM NaCl 48 hours 0.51 >More info 0.34 >More info root cells cortex standard 1 hour root cells cortex Original data
89 whole roots -Fe 48 hour 0.54 >More info 0.31 >More info whole roots standard Original data GEO bulk
90 Mutant iaa17-6 -0.61 >More info -0.24 >More info Col Original data GEO bulk
91 Red Light 45min 0.23 >More info 0.62 >More info White Light 45min Original data Light treatments
92 bri1-116 0.12 >More info 0.73 >More info Col seedling Original data GEO bulk
93 protoplasted roots pH4.6 0.55 >More info 0.28 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
94 root control p35S 0.58 >More info 0.25 >More info root control total control root Original data GEO bulk
95 Root dark control 24h 0.53 >More info 0.29 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
96 phr1 phl1 Root-Pi -0.53 >More info -0.29 >More info WT Shoot+Pi roots Original data GEO bulk
97 IAA 12h 0.55 >More info 0.27 >More info control 12h root Original data GEO bulk
98 Mutant iaa17-6 (IAA) 0.66 >More info 0.16 >More info Col (IAA) Original data GEO bulk
99 root control pRPL11C 0.59 >More info 0.22 >More info root control total control root Original data GEO bulk
100 IAA 24h 0.54 >More info 0.26 >More info control 24h root Original data GEO bulk
101 Root dark control 7h 0.53 >More info 0.25 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
102 root cells endodermis and quiescent center -Fe 0.51 >More info 0.27 >More info whole roots standard Original data GEO bulk
103 WT 30μM arsenate 8 hours. 0.51 >More info 0.27 >More info WT control (not supplemented). Original data
104 empty vector IAA Treated 0.19 >More info 0.59 >More info empty vector mock Original data GEO bulk
105 seedlings + TSA 0.50 >More info 0.27 >More info control seedlings 10-day old whole seedling Original data GEO bulk
106 Laer pretreat GA Flg22 1h 0.06 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
107 root control pSHR 0.51 >More info 0.25 >More info root control total control root Original data GEO bulk
108 1h +Pi -0.52 >More info -0.24 >More info 1h -Pi root Original data GEO bulk
109 root control pSultr2:2 0.51 >More info 0.25 >More info root control total control root Original data GEO bulk
110 Shoot apex inflorescence (after bolting) 0.11 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
111 Root submergence 24h 0.52 >More info 0.23 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
112 roots ethylene 0.11 >More info 0.64 >More info roots air Original data GEO bulk
113 low R/FR mock spray 0.18 >More info 0.52 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
114 Cycloheximide 3 h 0.52 >More info 0.17 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
115 Mutant iaa5_6_19 -0.67 >More info -0.02 >More info Col Original data GEO bulk
116 root cells columella root cap -Fe 0.51 >More info 0.18 >More info whole roots standard Original data GEO bulk
117 Col0-PsmES4326-24hpi 0.08 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
118 Mutant iaa5_6_19(IAA) 0.56 >More info 0.12 >More info Col (IAA) Original data GEO bulk
119 AtMYB30-ox 2-4h Xanthomonas -0.07 >More info -0.57 >More info WT 2-4h Xanthomonas Original data GEO bulk
120 root protoplasts 40 mM NaCl 0.50 >More info 0.13 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
121 P.p 30hai 0.53 >More info 0.10 >More info At-Control roots Original data GEO bulk
122 ACC 3 h 0.09 >More info 0.54 >More info Mock 3 h Original data Basic hormone treatment of seedlings
123 Leafminer damaged seedlings 0.06 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
124 seed germinating in countinuous light 24h SL -0.07 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
125 Mutant sav3-2 (SH) -0.08 >More info -0.52 >More info Col-0 (SH) Original data GEO bulk
126 sav3-2 shade -0.08 >More info -0.52 >More info Col-0 shade seedlings Original data GEO bulk
127 QC pSCR 3h BL -0.02 >More info 0.60 >More info QC pSCR 0h BL brassinosteroid root Original data
128 siliques AtHb1 control 0.05 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
129 IAA7mII over-expressor IAA Treated -0.14 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
130 6-trichlorophenoxyacetic acid 3 h 0.54 >More info -0.00 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
131 CCA1-ox 6am non-polysomal -0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
132 Cs shoot 0.05 >More info -0.53 >More info control shoot Original data GEO bulk
133 root hypoxia p35S 0.50 >More info -0.09 >More info root hypoxia total hypoxia root Original data GEO bulk