4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on sav3-2 shade
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List of experiments correlated with "sav3-2 shade"  Help Download transcriptome of top 30
Score Experiment Correlation from
sav3-2 shade		 Correlation to
sav3-2 shade		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 sav3-2 shade 1.00 >More info 1.00 >More info Col-0 shade seedlings Original data GEO bulk
2 Mutant sav3-2 (SH) 0.99 >More info 0.99 >More info Col-0 (SH) Original data GEO bulk
3 sav3-2 light 0.84 >More info 0.95 >More info Col-0 light seedlings Original data GEO bulk
4 Mutant sav3-2 (WL) 0.84 >More info 0.95 >More info Col-0 (WL) Original data GEO bulk
5 GR-bdl DEX IAA 0.72 >More info 0.71 >More info GR-bdl IAA Original data GEO bulk
6 MPK6 ox Shoot Hypoxia 0.74 >More info 0.69 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
7 IAA 1 h -0.71 >More info -0.67 >More info Mock 1 h Original data Basic hormone treatment of seedlings
8 IAA Treated -0.76 >More info -0.59 >More info Negative Control Original data GEO bulk
9 WT NAA 2h -0.58 >More info -0.76 >More info WT 0h Leaf tissue Original data GEO bulk
10 cdpk6-yfp 0.71 >More info 0.56 >More info Kan seedlings Original data GEO bulk
11 INA 0.59 >More info 0.67 >More info CK INA seedling Original data
12 low R/FR mock spray -0.70 >More info -0.56 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
13 Fei-0-30min IAA -0.70 >More info -0.55 >More info Fei-0-0h IAA whole plant Original data GEO bulk
14 Col-0 shade -0.70 >More info -0.55 >More info Col-0 light seedlings Original data GEO bulk
15 IAA 0.5 h -0.65 >More info -0.59 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
16 FarRed Light 4 h 0.55 >More info 0.67 >More info White Light 4 h Original data Light treatments
17 Bay-0-1h IAA -0.66 >More info -0.56 >More info Bay-0-0h IAA whole plant Original data GEO bulk
18 FarRed Light 45min -0.46 >More info -0.75 >More info White Light 45min Original data Light treatments
19 WT hypoxia -0.74 >More info -0.46 >More info WT normoxia whole rosette Original data
20 phyB mutant 22C 10hrs -0.71 >More info -0.49 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
21 bri1-116 0.47 >More info 0.73 >More info Col seedling Original data GEO bulk
22 Cor 24h 0.68 >More info 0.51 >More info Mock 24h Cor Original data GEO bulk
23 Col-0 DCA 48h 0.66 >More info 0.52 >More info Col-0 MOCK 48h Original data GEO bulk
24 SA 0.67 >More info 0.50 >More info WT mock Whole seedling Original data GEO bulk
25 npr1-3 DCA 48h 0.63 >More info 0.53 >More info npr1-3 MOCK 48h Original data GEO bulk
26 Col-0-1h IAA -0.74 >More info -0.41 >More info Col-0-0h IAA whole plant Original data GEO bulk
27 Mutant cry1 -0.71 >More info -0.44 >More info Col-0 Original data GEO bulk
28 Red Light 45min -0.54 >More info -0.61 >More info White Light 45min Original data Light treatments
29 Propiconazole 3 h 0.52 >More info 0.63 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
30 cry1 low light -0.71 >More info -0.44 >More info Col-O low light Original data GEO bulk
31 smg7b-1 0.62 >More info 0.52 >More info WT whole plant Original data GEO bulk
32 Mutant axr3-1 0.68 >More info 0.46 >More info Col Original data GEO bulk
33 IAA 3 h -0.56 >More info -0.58 >More info Mock 3 h Original data Basic hormone treatment of seedlings
34 BI-1-30min IAA -0.71 >More info -0.43 >More info BI-1-0h IAA whole plant Original data GEO bulk
35 Mutant nph4-1_arf19-1 (IAA) 0.66 >More info 0.47 >More info Col (IAA) Original data GEO bulk
36 Mature callus 0.69 >More info 0.44 >More info Young callus hypocotyls Original data GEO bulk
37 Elevated CO2 AMPLE N DAY 0.64 >More info 0.48 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
38 Col-0 low R/FR -0.72 >More info -0.39 >More info Col-0 high R/FR low R/FR seedlings Original data GEO bulk
39 rsa3-1 Na 24h 0.55 >More info 0.54 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
40 46T-CK 0.48 >More info 0.61 >More info WT-CK none Original data
41 Elevated CO2 fully expanded leaf 0.64 >More info 0.44 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
42 CCA14 dark late -0.59 >More info -0.49 >More info Col dark late Original data GEO bulk
43 Mutant siz1-3 0.67 >More info 0.41 >More info Col-0 Original data GEO bulk
44 Col-0-30min IAA -0.75 >More info -0.33 >More info Col-0-0h IAA whole plant Original data GEO bulk
45 siz1-3 control 0.67 >More info 0.41 >More info Col-0 control Original data GEO bulk
46 auxin and brassinazole seedlings 0.68 >More info 0.39 >More info auxin seedlings Original data GEO bulk
47 WT powdery mildew 0.64 >More info 0.43 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
48 erf104-ko H2O 4h 0.62 >More info 0.45 >More info Col-0 H2O 4h Original data GEO bulk
49 toc1-1-81hr 0.64 >More info 0.43 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
50 lht1 untreated 0.69 >More info 0.38 >More info WT untreated untreated leaf Original data GEO bulk
51 polysome mRNA eif3k 0.49 >More info 0.58 >More info polysome mRNA WT aerial part Original data GEO bulk
52 hy5 low light -0.69 >More info -0.37 >More info Col-O low light Original data GEO bulk
53 Mutant hy5 -0.69 >More info -0.37 >More info Col-0 Original data GEO bulk
54 Mutant nph4-1 (IAA) 0.60 >More info 0.46 >More info Col (IAA) Original data GEO bulk
55 Blue Light 4 h 0.51 >More info 0.55 >More info White Light 4 h Original data Light treatments
56 G3P 0.49 >More info 0.57 >More info Mock distal leaves Original data GEO bulk
57 Col-0 INA 48h 0.50 >More info 0.55 >More info Col-0 MOCK 48h Original data GEO bulk
58 sav1-1 light 0.51 >More info 0.54 >More info Col-0 light seedlings Original data GEO bulk
59 AgNO3 3 h 0.60 >More info 0.45 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
60 Mutant ga1-5 -0.54 >More info -0.51 >More info Ler-1 Original data Comparison of plant hormone related mutant
61 Atwrky63 -0.60 >More info -0.44 >More info Col0 none leaf Original data GEO bulk
62 ceh1 mutant 0.66 >More info 0.38 >More info Parent line Original data
63 UV Stress 24 h (shoot) 0.69 >More info 0.35 >More info Stress mock 24 h (shoot) Original data Stress treatments
64 sav1-1 shade 0.48 >More info 0.56 >More info Col-0 shade seedlings Original data GEO bulk
65 etiolated cop1BBX22-GFPox 0.62 >More info 0.41 >More info etiolated Col-0 whole seedlings Original data GEO bulk
66 WT NAA 1h -0.36 >More info -0.67 >More info WT 0h Leaf tissue Original data GEO bulk
67 bZIP1ko mutant N-Light- -0.63 >More info -0.39 >More info WT-sib N-Light- whole plant Original data GEO bulk
68 35S::ERF104 H2O 4h 0.63 >More info 0.39 >More info Col-0 H2O 4h Original data GEO bulk
69 Fei-0-1h IAA -0.53 >More info -0.49 >More info Fei-0-0h IAA whole plant Original data GEO bulk
70 petiole in FRD -0.68 >More info -0.34 >More info petiole in WL petioles Original data GEO bulk
71 toc1-1-85hr 0.52 >More info 0.50 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
72 Sha-1h IAA -0.57 >More info -0.45 >More info Sha-0h IAA whole plant Original data GEO bulk
73 Octopus overexpressor 35SDYG25 0.53 >More info 0.49 >More info WS Original data GEO bulk
74 cat2-2; 8h switch to ambient CO2 concentrations; 0.45 >More info 0.57 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
75 eds16 whole leaf 7d UI -0.54 >More info -0.47 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
76 35S:LOB-GR mock 0.55 >More info 0.46 >More info Col mock mock seedling Original data GEO bulk
77 WT-SA 0.64 >More info 0.37 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
78 Mutant NahG(leaf) -0.57 >More info -0.44 >More info Col-0 (leaf) Original data GEO bulk
79 plant (tga2-5-6) 4h control 0.58 >More info 0.42 >More info plant (Col-0) 4h control Original data GEO bulk
80 eds16 whole leaf 5dpi -0.70 >More info -0.30 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
81 csn4-1 mutant 0.62 >More info 0.38 >More info WT dark Original data GEO bulk
82 Mutant tga2_5_6 0.58 >More info 0.42 >More info Col-0 Original data GEO bulk
83 SAB 0.50 >More info 0.50 >More info COL seedling Original data
84 DC3000 24h 0.65 >More info 0.35 >More info Mock 24h DC3000 Original data GEO bulk
85 BI-1-1h IAA -0.59 >More info -0.40 >More info BI-1-0h IAA whole plant Original data GEO bulk
86 wavy 0.56 >More info 0.43 >More info WT Original data GEO bulk
87 A. lyrata -0.60 >More info -0.39 >More info A. thaliana mature leaves before flowering Original data GEO bulk
88 IAA7mII over-expressor IAA Treated 0.30 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
89 Col BTH 0.32 >More info 0.67 >More info Col rosettes Original data GEO bulk
90 PIF5ox low R/FR 0.65 >More info 0.33 >More info Col-0 low R/FR low R/FR seedlings Original data GEO bulk
91 Mutant cry1 (High Light) -0.66 >More info -0.32 >More info Col-0 (High Light) Original data GEO bulk
92 cry1 high light -0.66 >More info -0.32 >More info Col-O high light Original data GEO bulk
93 Col0-PsmES4326-24hpi 0.37 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
94 eds16 whole leaf 3dpi -0.54 >More info -0.43 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
95 C24-30min IAA -0.66 >More info -0.31 >More info C24-0h IAA whole plant Original data GEO bulk
96 IRP1-OE-Ctrl--shoot 0.72 >More info 0.25 >More info COL-0-Ctrl--shoot shoot Original data
97 csn5 (csn5a-2 csn5b) dark 0.59 >More info 0.37 >More info WT dark Original data GEO bulk
98 camta2/3 warm 0.67 >More info 0.29 >More info WT warm entire aerial part Original data GEO bulk
99 Light 0.5h polysome-bound 0.55 >More info 0.41 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
100 DVL4 induced -0.59 >More info -0.37 >More info emptyvectordex Original data GEO bulk
101 Col-O low light 0.74 >More info 0.22 >More info Col-O bule light Original data GEO bulk
102 camta1/3 warm 0.65 >More info 0.30 >More info WT warm entire aerial part Original data GEO bulk
103 downy mildew cotyledons early stage 0.63 >More info 0.32 >More info mock inoculated Cotyledons Original data GEO bulk
104 ATR1 OE -0.63 >More info -0.32 >More info WT for ATR1/MYB51 Original data GEO bulk
105 Uniconazole 3 h 0.50 >More info 0.45 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
106 Red/FR Light 4 h -0.44 >More info -0.51 >More info FarRed Light 4 h Original data Light treatments
107 sid2 -0.61 >More info -0.33 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
108 IRP1-OE-Fe--shoot 0.63 >More info 0.31 >More info COL-0-Fe--shoot shoot Original data
109 coi1-16 ein2 sid2 ctrl -0.71 >More info -0.23 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
110 camta3-2 0.53 >More info 0.40 >More info WT Original data GEO bulk
111 SA 24h 0.15 >More info 0.78 >More info EtOH 24h 24hr Original data GEO bulk
112 WT-NOCO2 INFECTED 0.61 >More info 0.32 >More info WT-MOCK Original data GEO bulk
113 Sha-30min IAA -0.57 >More info -0.36 >More info Sha-0h IAA whole plant Original data GEO bulk
114 PAHs stress 0.61 >More info 0.32 >More info exp control phenanthrene whole plants Original data GEO bulk
115 IAA 1h -0.51 >More info -0.41 >More info control 1h root Original data GEO bulk
116 UV 0.63 >More info 0.29 >More info WT aerial region Original data GEO bulk
117 S15-118 0.62 >More info 0.30 >More info wt Original data GEO bulk
118 aba3-1 0.53 >More info 0.38 >More info wt Original data GEO bulk
119 C24-1h IAA -0.54 >More info -0.37 >More info C24-0h IAA whole plant Original data GEO bulk
120 seedling 24h after Gamma atm-1 0.51 >More info 0.40 >More info seedling day 2 unirradiated atm-1 24h Original data
121 FOX line K19624 0.65 >More info 0.26 >More info empty vector control (T3) FOX lines Original data GEO bulk
122 seedling 24h after Gamma WT 0.50 >More info 0.41 >More info seedling day 2 unirradiated WT 24h Original data
123 BLM+INA 0.60 >More info 0.31 >More info CK BLM and INA seedling Original data
124 camta1/2/3 warm 0.70 >More info 0.21 >More info WT warm entire aerial part Original data GEO bulk
125 lht1 PstDC3000 48h 0.58 >More info 0.33 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
126 SPT4-R3 seedlings0 DAS 0.53 >More info 0.37 >More info Col-0 seedlings0 DAS seedlings Original data
127 cpr5 0.64 >More info 0.26 >More info WT seedling Original data GEO bulk
128 toc1-1-57hr 0.55 >More info 0.35 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
129 erf5 erf6 -0.60 >More info -0.30 >More info WT+water water seedlings Original data GEO bulk
130 csn3-1 dark 0.55 >More info 0.34 >More info WT dark Original data GEO bulk
131 csn3-1 light 0.63 >More info 0.26 >More info WT light Original data GEO bulk
132 RPL18 TuMV inoculated polysomal RNA 0.57 >More info 0.32 >More info mock inoculated polysomal RNA PO Original data GEO bulk
133 S58-2 0.59 >More info 0.30 >More info wt Original data GEO bulk
134 Mutant clv3-7(flower) -0.60 >More info -0.29 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
135 Shoot -Cs 0.54 >More info 0.34 >More info Control-shoot Original data GEO bulk
136 coi1-16 ein2 sid2 ozone 0.65 >More info 0.23 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
137 eds16 whole leaf 7dpi -0.62 >More info -0.26 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
138 35S::PI ap3-3 35S::AP-GR +DEX 0.38 >More info 0.50 >More info 0hr DEX Original data GEO bulk
139 A. thaliana-A. halleri hybrid -0.58 >More info -0.30 >More info A. thaliana mature leaves before flowering Original data GEO bulk
140 toc1-1-53hr 0.58 >More info 0.30 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
141 AtLysM RLK1 mutant water 0.56 >More info 0.31 >More info WT water Original data GEO bulk
142 sni1 0.55 >More info 0.32 >More info WT Original data GEO bulk
143 Col leaves 120h LT 0.53 >More info 0.34 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
144 Tsu -Fe 48h Shoots 0.55 >More info 0.32 >More info Tsu +Fe 24h Shoots Original data GEO bulk
145 sdg2 0.61 >More info 0.26 >More info wt seedling Original data GEO bulk
146 csn5 (csn5a-2 csn5b) light 0.61 >More info 0.26 >More info WT light Original data GEO bulk
147 Col leaves 48h LT 0.57 >More info 0.30 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
148 LTN008-2 aza-dc 0.65 >More info 0.21 >More info LTN012-2 Mock Original data
149 opr3 OPDA 2 h 0.32 >More info 0.53 >More info opr3 0 h Original data GEO bulk
150 ice1 control 0.59 >More info 0.26 >More info WT control Original data GEO bulk
151 cpr5 0.60 >More info 0.25 >More info WT(COL) Original data GEO bulk
152 A. halleri -0.50 >More info -0.35 >More info A. thaliana mature leaves before flowering Original data GEO bulk
153 Mutant iaa5_6_19 0.60 >More info 0.25 >More info Col Original data GEO bulk
154 WT (Col-0) inflorescence moderate drought day 10 -0.55 >More info -0.29 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
155 NAA -AA -0.54 >More info -0.30 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
156 CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold -0.55 >More info -0.29 >More info CSP1 immonoprecipitated RNA 35S:HF-RPL18 12h cold (4C) rosettes Original data GEO bulk
157 pmr4-1 control 0.50 >More info 0.34 >More info WT control uninoculated Original data GEO bulk
158 msh1 albino 0.62 >More info 0.22 >More info WT aerial part Original data GEO bulk
159 Dark 6h hml -0.61 >More info -0.23 >More info 0h hml Original data
160 Dark 6h wt -0.57 >More info -0.27 >More info 0h wt Original data
161 Col-0 DEX Shade -0.50 >More info -0.33 >More info Col-0 DEX WL seedlings Original data
162 Shoot apex inflorescence (after bolting) 0.18 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
163 Mutant iaa17-6 0.69 >More info 0.14 >More info Col Original data GEO bulk
164 cat2-long-day 2d -0.71 >More info -0.12 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
165 Imidazolinone EC50 0.54 >More info 0.28 >More info Carrier (Imidazolinone) Original data GEO bulk
166 R. solani AG2-1 0.63 >More info 0.19 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
167 Mutant siz1-3 (Drought) 0.55 >More info 0.27 >More info Col-0 (Drought) Original data GEO bulk
168 siz1-3 drought 0.55 >More info 0.27 >More info Col-0 drought Original data GEO bulk
169 rosette leaves bdg -0.52 >More info -0.30 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
170 rdr6-15 0.57 >More info 0.25 >More info Col-0 plant inflorescence Original data
171 Col-0 Mock Shade -0.61 >More info -0.20 >More info Col-0 Mock WL seedlings Original data
172 TaFLS overexpression line (OE2) -0.56 >More info -0.25 >More info Col-0 Rosette leaves Original data
173 Salicylic Acid 3 h 0.27 >More info 0.54 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
174 cpr5npr1 0.59 >More info 0.22 >More info WT(COL) Original data GEO bulk
175 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.63 >More info 0.17 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
176 WT Atum 1h 0.60 >More info 0.20 >More info WT 0h Leaf tissue Original data GEO bulk
177 pnp1-1 1wk -P 0.61 >More info 0.19 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
178 Mutant ufo-1(flower) 0.51 >More info 0.29 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
179 pXVE:HA-EDM2-a untreated -0.53 >More info -0.27 >More info Col-0 untreated seedlings Original data GEO bulk
180 Col-0 ozone 0.63 >More info 0.17 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
181 Te ozone 0.61 >More info 0.19 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
182 Heat shock 30%Inhibition -0.60 >More info -0.20 >More info Heat shock baseline Photosynthesis at 30% inhibition from optimum leaf first fully expanded Original data GEO bulk
183 upf1 0.58 >More info 0.22 >More info WT whole plant Original data GEO bulk
184 ice1 6H Cold 0.57 >More info 0.23 >More info WT 6H Cold Original data GEO bulk
185 mutant-line409 -0.51 >More info -0.28 >More info WT-control whole plant Original data GEO bulk
186 ape2 high light 0.65 >More info 0.14 >More info Ws-2 high light Original data GEO bulk
187 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.60 >More info 0.19 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
188 WT +Pep2 10h 0.60 >More info 0.19 >More info WT untreated Pep2 Original data GEO bulk
189 WT chitooctaose 0.59 >More info 0.20 >More info WT water Original data GEO bulk
190 Heat shock 20%Inhibition -0.60 >More info -0.19 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
191 CHS-silenced type -0.69 >More info -0.10 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
192 20h Col-0 0.51 >More info 0.27 >More info 00h Col-0 Original data GEO bulk
193 PstDC3000 48h 0.51 >More info 0.27 >More info WT untreated 48hr leaf Original data GEO bulk
194 OE WRKY63.3 0.55 >More info 0.23 >More info OE WRKY40.4 none leaf Original data GEO bulk
195 Col 1d -0.50 >More info -0.28 >More info Col CA Leaves Original data
196 WT Shoot Hypoxia 0.60 >More info 0.18 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
197 WT seedlings IAA -0.60 >More info -0.18 >More info WT seedlings control Seedlings Original data GEO bulk
198 P.syringae vir 4 h (leaf) 0.19 >More info 0.59 >More info Mock 4 h (leaf) Original data Elicitor treatments
199 exo70A1 -0.50 >More info -0.27 >More info Col-0 whole plant Original data GEO bulk
200 A. thaliana-A. lyrata hybrid -0.54 >More info -0.23 >More info A. thaliana mature leaves before flowering Original data GEO bulk
201 Triazolopyrimidine EC50 0.53 >More info 0.24 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
202 OH1 0.53 >More info 0.24 >More info Col-0 leaves Original data GEO bulk
203 gir flower 33d 0.60 >More info 0.17 >More info Col-7 flower 33d flower Original data GEO bulk
204 siliques AtHb1 control 0.25 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
205 ice1 3H Cold 0.51 >More info 0.25 >More info WT 3H Cold Original data GEO bulk
206 Cor hrpS 10h 0.52 >More info 0.24 >More info Mock 10h Cor hrpS Original data GEO bulk
207 ACN1-2 0.06 >More info 0.70 >More info col-7 Original data GEO bulk
208 cat2-2; 0h switch to ambient CO2 concentrations; -0.65 >More info -0.10 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
209 pepr1-1 Pepr2-3 +Pep2 10h -0.56 >More info -0.19 >More info WT +Pep2 10h Pep2 Original data GEO bulk
210 vte2-1 3d vernalization 0.50 >More info 0.25 >More info WT 3d vernalization Original data GEO bulk
211 C24 UV1 -0.70 >More info -0.05 >More info C24 mock UV seedling Original data
212 expressing C2 MeJA -0.54 >More info -0.21 >More info LUC2T Original data GEO bulk
213 Leafminer damaged seedlings 0.19 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
214 camta3-1 0.61 >More info 0.13 >More info WT Original data GEO bulk
215 total mRNA eif3k 0.54 >More info 0.20 >More info total mRNA WT aerial part Original data GEO bulk
216 gh3.5-1D 48 hpi 0.50 >More info 0.24 >More info Col-0 uninoculated Original data GEO bulk
217 35S-MIF1 dark grown 0.58 >More info 0.16 >More info Dark-grown WT control Original data GEO bulk
218 Tsu -Fe 24h Shoots 0.57 >More info 0.17 >More info Tsu +Fe 24h Shoots Original data GEO bulk
219 Col whole leaf 5dpi 0.57 >More info 0.17 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
220 GR:KAN1 DEX Shade 0.56 >More info 0.17 >More info GR:KAN1 Mock Shade seedlings Original data
221 Mutant arf2-6 (IAA) -0.75 >More info 0.02 >More info Col (IAA) Original data GEO bulk
222 pad4-est1b-1-doublemutant 0.55 >More info 0.18 >More info pad4-mutant developed rosette leaves Original data GEO bulk
223 SLWF infested 0.51 >More info 0.22 >More info SLWF uninfested rosette tissue Original data GEO bulk
224 empty vector IAA Treated -0.22 >More info -0.51 >More info empty vector mock Original data GEO bulk
225 seedling 12h after Gamma atm-1 0.55 >More info 0.17 >More info seedling day 1 unirradiated atm-1 12h Original data
226 hog1-7 0.55 >More info 0.17 >More info wt whole seedling Original data GEO bulk
227 35S:RPS4 eds1-2 24h -0.55 >More info -0.17 >More info 35S:RPS4 24h leaves Original data
228 pvip1 pvip2 0.56 >More info 0.16 >More info Col-0 whole rosettes Original data GEO bulk
229 mutant-line774 0.55 >More info 0.17 >More info WT-control whole plant Original data GEO bulk
230 BI-1-3h IAA -0.52 >More info -0.20 >More info BI-1-0h IAA whole plant Original data GEO bulk
231 edr1 96 h powdery mildew -0.61 >More info -0.11 >More info Col-0 96 h powdery mildew Original data GEO bulk
232 leaf blade in FRD -0.54 >More info -0.18 >More info leaf blade in WL leaf blades Original data GEO bulk
233 PNO8 12 h -0.12 >More info -0.60 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
234 smg5-2 0.55 >More info 0.16 >More info WT whole plant Original data GEO bulk
235 ahg2-1 0.56 >More info 0.15 >More info WT (Col) control Original data GEO bulk
236 4C 24h(SOIL) -0.57 >More info -0.14 >More info 4C 0h(SOIL) Original data GEO bulk
237 cpr5scv1 0.57 >More info 0.14 >More info WT(COL) Original data GEO bulk
238 WT +elf18 10h 0.58 >More info 0.13 >More info WT untreated elf18 Original data GEO bulk
239 seedling 12h after HZE atm-1 0.58 >More info 0.13 >More info seedling day 1 unirradiated atm-1 12h Original data
240 toc1-1-89hr 0.51 >More info 0.20 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
241 scrm-D:mute 0.58 >More info 0.12 >More info Col-0 WT whole seedling Original data GEO bulk
242 edr1 18 h powdery mildew 0.57 >More info 0.13 >More info Col-0 18 h powdery mildew Original data GEO bulk
243 12h Col-0 0.54 >More info 0.15 >More info 00h Col-0 Original data GEO bulk
244 npr1-1 SA -0.51 >More info -0.18 >More info Col-0 SA complete seedling Original data
245 cov1 cov2 stem Base 0.59 >More info 0.10 >More info WT stem Base stem Base Original data GEO bulk
246 tga2 tga5 tga6 ctrl -0.50 >More info -0.19 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) control Original data
247 cpr5npr1svi1 0.57 >More info 0.12 >More info WT(COL) Original data GEO bulk
248 ALC Toc1 light-dark Mock 0.53 >More info 0.15 >More info Col light-dark Mock no ethanol Original data GEO bulk
249 Glyphosate EC50 0.55 >More info 0.13 >More info Carrier (Glyphosate) Original data GEO bulk
250 ape2 low light 0.55 >More info 0.13 >More info Ws-2 low light Original data GEO bulk
251 brm-101 0.50 >More info 0.18 >More info Ler Original data GEO bulk
252 arf6 arf8 stage3 0.55 >More info 0.12 >More info WT stage3 Original data GEO bulk
253 pho1 0.68 >More info -0.01 >More info Col2WT Original data GEO bulk
254 prmt5-5 -0.51 >More info -0.16 >More info WT Col continuous light Aerial tissue Original data GEO bulk
255 Differentiation 48h -0.58 >More info -0.09 >More info Differentiation 0h leaves Original data
256 wrky33 Bc inoculation 14h 0.57 >More info 0.09 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
257 CT101 ozone 0.53 >More info 0.12 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
258 35S::KLU 0.56 >More info 0.09 >More info WT Shoot Original data
259 ddm1 F6 inflorescence 0.56 >More info 0.09 >More info wt Col inflorescence unopened flower buds Original data
260 dcl1-7 0.50 >More info 0.15 >More info Ler Original data GEO bulk
261 GO5; 0h switch to ambient CO2 concentrations; -0.65 >More info 0.01 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
262 myb21 myb24 stage3 0.50 >More info 0.14 >More info WT stage3 Original data GEO bulk
263 ACN1-2 Sucrose -0.00 >More info 0.64 >More info Col-7 Sucrose Original data GEO bulk
264 abh1 -ABA 0.58 >More info 0.06 >More info Col-0 -ABA Original data GEO bulk
265 mutant-line348 -0.55 >More info -0.08 >More info WT-control whole plant Original data GEO bulk
266 oxt6 mutant -0.51 >More info -0.12 >More info WT Original data GEO bulk
267 sid2-1 cold -0.51 >More info -0.12 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
268 Col whole leaf 7dpi 0.50 >More info 0.12 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
269 Senescing leaf 0.54 >More info 0.07 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
270 spx1 spx2 complete 0.50 >More info 0.11 >More info WT complete seedlings Original data
271 Differentiation 36h -0.58 >More info -0.03 >More info Differentiation 0h leaves Original data
272 HARAP hypoxic 0.51 >More info 0.10 >More info hypoxic hypoxia Original data GEO bulk
273 ahg1-1 0.05 >More info -0.66 >More info ABA control Original data GEO bulk
274 etiolated cop1 0.56 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
275 seed germinating in countinuous light 24h SL -0.07 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
276 columella auxin -0.52 >More info -0.08 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
277 WT-drought 0.57 >More info 0.03 >More info WT-control leaf Original data
278 dTLEc control -0.57 >More info -0.03 >More info wt control leaves Original data GEO bulk
279 bio4-1 mutant leaves 0.57 >More info 0.03 >More info WT leaves leaves Original data GEO bulk
280 oas-a1.1 root 0.06 >More info 0.53 >More info WT-Untreated Root Original data GEO bulk
281 Laer pretreat GA Flg22 1h -0.12 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
282 red illumination +lincomycin 0.00 >More info 0.59 >More info red illumination -lincomycin Original data GEO bulk
283 WT in -N 0.55 >More info 0.03 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
284 efr-1 +elf18 10h -0.51 >More info -0.07 >More info WT +elf18 10h elf18 Original data GEO bulk
285 SA Treated 0.50 >More info 0.08 >More info Water Original data GEO bulk
286 upf3 0.50 >More info 0.08 >More info WT whole plant Original data GEO bulk
287 4C 24h -0.61 >More info 0.03 >More info 4C 0h Original data GEO bulk
288 35S:RPS4 eds1-2 8h -0.50 >More info -0.08 >More info 35S:RPS4 8h leaves Original data
289 csn4-1 dark 0.52 >More info 0.05 >More info WT light Original data GEO bulk
290 atgsnor1-1 -0.58 >More info 0.01 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
291 Differentiation 24h -0.58 >More info 0.01 >More info Differentiation 0h leaves Original data
292 vtc1-1 0.52 >More info 0.04 >More info Col-0 whole plant Original data GEO bulk
293 Heat shock optimum -0.09 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
294 Drought Stress 24 h (shoot) 0.64 >More info -0.09 >More info Stress mock 24 h (shoot) Original data Stress treatments
295 vte2 leaves 120h LT 0.51 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
296 overexpresser LBD37 in -N -0.51 >More info -0.03 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
297 cdm1 mutant floral young floral buds -0.52 >More info -0.02 >More info WT floral yound floral buds Unopen flower buds Original data
298 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.58 >More info 0.04 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
299 CCA1-ox 6am non-polysomal 0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
300 ataf1-1 mutant Col-0 Un-inoculated -0.56 >More info 0.04 >More info WT Col-0 Un-inoculated Original data GEO bulk
301 WT salt 12 h 0.50 >More info 0.02 >More info WT salt 0 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
302 triplod male excess -0.00 >More info 0.52 >More info tetraploid Original data GEO bulk
303 t-zeatin 1 h -0.54 >More info 0.03 >More info Mock 1 h Original data Basic hormone treatment of seedlings
304 ISOXABEN -0.50 >More info -0.01 >More info CON 0.1 mM ISOXABEN Original data GEO bulk
305 ataf1-1 mutant Col-0 Bgh inoculated 0.54 >More info -0.04 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
306 2hr continuous KNO3 and MSX PeR cell -0.04 >More info 0.53 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
307 Col ozone 3h 0.53 >More info -0.05 >More info Col clean-air 3h ozone Original data GEO bulk
308 Cs root 0.50 >More info -0.03 >More info control root Original data GEO bulk
309 WT 1wk -P 0.50 >More info -0.04 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
310 Total RNA 35S:AtCSP1-FH1 cold 0.50 >More info -0.04 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
311 swn-7 -0.53 >More info 0.07 >More info Col whole plant Original data GEO bulk
312 WT 1mM phosphate 8 hours. -0.55 >More info 0.11 >More info WT control (not supplemented). Original data
313 Differentiation 12h -0.52 >More info 0.08 >More info Differentiation 0h leaves Original data
314 phyB mutant 16C 10hrs -0.50 >More info 0.06 >More info 16C 10h whole plant excluding roots Original data GEO bulk
315 bZIP1ko mutant N+Light- 0.53 >More info -0.11 >More info WT-sib N+Light- whole plant Original data GEO bulk
316 sex1-3 0.55 >More info -0.18 >More info Col-WT leaves Original data GEO bulk
317 npr1-3 MOCK 48h -0.51 >More info 0.14 >More info Col-0 MOCK 48h Original data GEO bulk
318 miR393 0h 0.50 >More info -0.13 >More info WT 0h Leaf tissue Original data GEO bulk
319 Total RNA 35S:HF-RPL18 cold 0.50 >More info -0.14 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
320 Cor hrpS 24h 0.56 >More info -0.22 >More info Mock 24h Cor hrpS Original data GEO bulk
321 ABA control 0.34 >More info -0.63 >More info No ABA control Original data GEO bulk
322 mkk1 24h BTH rep 0.25 >More info -0.50 >More info Col-0 24h BTH rep Original data GEO bulk
323 WT roots - Fe 0.53 >More info -0.33 >More info WT roots + Fe Roots Original data GEO bulk
324 AtMYB30-ox T0 0.50 >More info -0.32 >More info WT T0 Original data GEO bulk