4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Col-0 low R/FR
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List of experiments correlated with "Col-0 low R/FR"  Help Download transcriptome of top 30
Score Experiment Correlation from
Col-0 low R/FR		 Correlation to
Col-0 low R/FR		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Col-0 low R/FR 1.00 >More info 1.00 >More info Col-0 high R/FR low R/FR seedlings Original data GEO bulk
2 low R/FR mock spray 0.76 >More info 0.81 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
3 Col-0 shade 0.71 >More info 0.80 >More info Col-0 light seedlings Original data GEO bulk
4 low R/FR JA spray 0.77 >More info 0.73 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
5 pif4pif5 mut 24h FR -0.70 >More info -0.64 >More info WT 24h FR Original data GEO bulk
6 PIF5ox low R/FR -0.75 >More info -0.55 >More info Col-0 low R/FR low R/FR seedlings Original data GEO bulk
7 WT NAA 2h 0.46 >More info 0.82 >More info WT 0h Leaf tissue Original data GEO bulk
8 piffq FR 3h -0.69 >More info -0.58 >More info WT FR 3h whole seedling Original data GEO bulk
9 IAA 3 h 0.62 >More info 0.63 >More info Mock 3 h Original data Basic hormone treatment of seedlings
10 Col-O low light -0.66 >More info -0.56 >More info Col-O bule light Original data GEO bulk
11 IAA 1 h 0.53 >More info 0.67 >More info Mock 1 h Original data Basic hormone treatment of seedlings
12 WT hypoxia 0.73 >More info 0.44 >More info WT normoxia whole rosette Original data
13 petiole in FRD 0.68 >More info 0.45 >More info petiole in WL petioles Original data GEO bulk
14 Mutant nph4-1_arf19-1 (IAA) -0.60 >More info -0.52 >More info Col (IAA) Original data GEO bulk
15 pif5 high R/FR -0.66 >More info -0.46 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
16 Mutant sav3-2 (SH) -0.39 >More info -0.72 >More info Col-0 (SH) Original data GEO bulk
17 sav3-2 shade -0.39 >More info -0.72 >More info Col-0 shade seedlings Original data GEO bulk
18 IAA Treated 0.44 >More info 0.65 >More info Negative Control Original data GEO bulk
19 Mutant nph4-1 (IAA) -0.58 >More info -0.51 >More info Col (IAA) Original data GEO bulk
20 Col-0-1h IAA 0.60 >More info 0.47 >More info Col-0-0h IAA whole plant Original data GEO bulk
21 leaf blade in FRD 0.69 >More info 0.36 >More info leaf blade in WL leaf blades Original data GEO bulk
22 GR-bdl DEX IAA -0.40 >More info -0.64 >More info GR-bdl IAA Original data GEO bulk
23 BI-1-1h IAA 0.52 >More info 0.51 >More info BI-1-0h IAA whole plant Original data GEO bulk
24 Fei-0-1h IAA 0.48 >More info 0.54 >More info Fei-0-0h IAA whole plant Original data GEO bulk
25 Bay-0-1h IAA 0.42 >More info 0.59 >More info Bay-0-0h IAA whole plant Original data GEO bulk
26 IAA 0.5 h 0.43 >More info 0.57 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
27 WT NAA 1h 0.40 >More info 0.59 >More info WT 0h Leaf tissue Original data GEO bulk
28 aerial organ callus inducing medium 24h 0.69 >More info 0.29 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
29 pif4pif5 high R/FR -0.52 >More info -0.45 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
30 CCA14 dark late 0.66 >More info 0.29 >More info Col dark late Original data GEO bulk
31 Light 0.5h polysome-bound -0.38 >More info -0.56 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
32 Sha-1h IAA 0.44 >More info 0.50 >More info Sha-0h IAA whole plant Original data GEO bulk
33 shl-2 Pool 0.39 >More info 0.54 >More info Ler Pool seedling Original data GEO bulk
34 WT Red light 18h -0.60 >More info -0.33 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
35 Light 4h polysome-bound -0.58 >More info -0.35 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
36 WT(Ler) Rc15 -0.56 >More info -0.35 >More info WT(Ler) Dark Original data GEO bulk
37 WT(Ler) Rc50 -0.55 >More info -0.36 >More info WT(Ler) Dark Original data GEO bulk
38 Heat shock optimum 0.26 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
39 aerial organ callus inducing medium 12 h 0.70 >More info 0.21 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
40 FarRed Light 45min 0.31 >More info 0.60 >More info White Light 45min Original data Light treatments
41 aerial organ callus inducing medium 48 h 0.65 >More info 0.25 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
42 Col0-PsmES4326-24hpi 0.28 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
43 WT Rc50 -0.54 >More info -0.34 >More info WT Dark red light whole seedling Original data GEO bulk
44 NAA -AA 0.62 >More info 0.26 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
45 Col-0-3h IAA 0.60 >More info 0.28 >More info Col-0-0h IAA whole plant Original data GEO bulk
46 35S:LOB-GR DEX -0.52 >More info -0.35 >More info Col DEX dexamethasone seedling Original data GEO bulk
47 2d dark-grown pif1pif3pif4pif5 (pifq) mutant -0.52 >More info -0.35 >More info 2d dark-grown WT seedling Original data GEO bulk
48 Laer pretreat GA Flg22 1h 0.16 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
49 C24-1h IAA 0.54 >More info 0.32 >More info C24-0h IAA whole plant Original data GEO bulk
50 downy mildew cotyledons early stage -0.62 >More info -0.24 >More info mock inoculated Cotyledons Original data GEO bulk
51 C24-3h IAA 0.62 >More info 0.24 >More info C24-0h IAA whole plant Original data GEO bulk
52 Myzus persicae saliva 0.50 >More info 0.35 >More info Control Original data GEO bulk
53 aphid saliva treated 0.50 >More info 0.35 >More info control aphid saliva treated leaves Original data GEO bulk
54 Mutant sav3-2 (WL) -0.35 >More info -0.50 >More info Col-0 (WL) Original data GEO bulk
55 sav3-2 light -0.35 >More info -0.50 >More info Col-0 light seedlings Original data GEO bulk
56 Col-0 Mock Shade 0.50 >More info 0.34 >More info Col-0 Mock WL seedlings Original data
57 Light 4h steady-state -0.54 >More info -0.30 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
58 ein2 1% sucrose 14-day-old -0.32 >More info -0.51 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
59 piffq FR 1h -0.56 >More info -0.26 >More info WT FR 1h whole seedling Original data GEO bulk
60 BI-1-3h IAA 0.51 >More info 0.31 >More info BI-1-0h IAA whole plant Original data GEO bulk
61 Fei-0-3h IAA 0.53 >More info 0.29 >More info Fei-0-0h IAA whole plant Original data GEO bulk
62 phyAphyB Dark 0.51 >More info 0.31 >More info phyB Dark Original data GEO bulk
63 phyB Dark -0.50 >More info -0.31 >More info WT(Ler) Dark Original data GEO bulk
64 Light 0.5h steady-state -0.29 >More info -0.52 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
65 seed germinating in countinuous light 24h SL 0.14 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
66 Cor 24h -0.31 >More info -0.50 >More info Mock 24h Cor Original data GEO bulk
67 46T-CK -0.30 >More info -0.51 >More info WT-CK none Original data
68 aerial organ callus inducing medium 96 h 0.62 >More info 0.17 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
69 Col BTH 0.11 >More info 0.67 >More info Col rosettes Original data GEO bulk
70 IAA 1h 0.25 >More info 0.52 >More info control 1h root Original data GEO bulk
71 mutant acs9B (single mutant) 0.50 >More info 0.26 >More info col control (single mutant) Original data GEO bulk
72 bri1-116 0.03 >More info 0.73 >More info Col seedling Original data GEO bulk
73 edr1 36 h powdery mildew 0.55 >More info 0.20 >More info Col-0 36 h powdery mildew Original data GEO bulk
74 Mutant iaa5_6_19 -0.52 >More info -0.23 >More info Col Original data GEO bulk
75 light -0.56 >More info -0.18 >More info dark light seedling Original data GEO bulk
76 Leafminer damaged seedlings 0.17 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
77 A2hsfa1-ox in quadruple mutant -0.52 >More info -0.21 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
78 Red Light 45min 0.23 >More info 0.50 >More info White Light 45min Original data Light treatments
79 -Sulfate 24 h 0.12 >More info 0.60 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
80 Shoot dark control 7h 0.55 >More info 0.15 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
81 35S:VND7-VP16-GR+CHX 0.14 >More info 0.55 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
82 G3P -0.52 >More info -0.16 >More info Mock distal leaves Original data GEO bulk
83 Shoot submergence 24h 0.50 >More info 0.18 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
84 rosette leaves fdh 0.53 >More info 0.14 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
85 Col-0 DCA 48h -0.55 >More info -0.12 >More info Col-0 MOCK 48h Original data GEO bulk
86 Mutant iaa17-6 -0.56 >More info -0.10 >More info Col Original data GEO bulk
87 Mutant arf2-6 (IAA) 0.52 >More info 0.11 >More info Col (IAA) Original data GEO bulk
88 CCA1-ox 6am non-polysomal 0.12 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
89 tt4 UV -0.01 >More info -0.60 >More info UV aerial region Original data GEO bulk
90 php 0.53 >More info 0.07 >More info WT Original data GEO bulk
91 R. solani AG8 0.50 >More info 0.07 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
92 ptpks2 -0.04 >More info 0.61 >More info Col-WT leaves Original data GEO bulk
93 Shoot apex inflorescence (after bolting) -0.09 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
94 IAA7mII over-expressor IAA Treated -0.14 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
95 siliques AtHb1 control -0.01 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
96 shoots bhlh100/101 100uM Fe 0.08 >More info -0.52 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk