4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on FarRed Light 45min
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List of experiments correlated with "FarRed Light 45min "  Help Download transcriptome of top 30
Score Experiment Correlation from
FarRed Light 45min 		Correlation to
FarRed Light 45min 		Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 FarRed Light 45min 1.00 >More info 1.00 >More info White Light 45min Original data Light treatments
2 Red/FR Light45min -0.84 >More info -0.87 >More info FarRed Light 45min Original data Light treatments
3 Light 0.5h steady-state -0.86 >More info -0.75 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
4 Light 0.5h polysome-bound -0.88 >More info -0.69 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
5 Blue Light 4 h -0.86 >More info -0.70 >More info White Light 4 h Original data Light treatments
6 NJ15 -0.81 >More info -0.74 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
7 FarRed Light 4 h -0.87 >More info -0.65 >More info White Light 4 h Original data Light treatments
8 Dark 40 min pls UV-A 5 min -0.85 >More info -0.64 >More info Dark 45 min Original data Light treatments
9 Dark 44min pls RedLigh 1min -0.84 >More info -0.64 >More info Dark 45 min Original data Light treatments
10 WT NAA 2h 0.85 >More info 0.62 >More info WT 0h Leaf tissue Original data GEO bulk
11 Red Light 45min 0.68 >More info 0.77 >More info White Light 45min Original data Light treatments
12 Red/FR Light 4 h 0.86 >More info 0.54 >More info FarRed Light 4 h Original data Light treatments
13 IAA 1 h 0.72 >More info 0.65 >More info Mock 1 h Original data Basic hormone treatment of seedlings
14 Col-0 DCA 6d 0.81 >More info 0.55 >More info Col-0 MOCK 6d Original data GEO bulk
15 Dark 40min pls UV-AB 5min -0.79 >More info -0.57 >More info Dark 45 min Original data Light treatments
16 60m light -0.75 >More info -0.60 >More info before light whole seedlings Original data GEO bulk
17 IAA Treated 0.84 >More info 0.46 >More info Negative Control Original data GEO bulk
18 Col-O high light -0.86 >More info -0.42 >More info Col-O bule light Original data GEO bulk
19 Night Time Treatment -0.77 >More info -0.49 >More info Night Time Control 1hr white light pulse aerial rosette Original data
20 IAA 0.5 h 0.75 >More info 0.50 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
21 GR-bdl DEX IAA -0.82 >More info -0.42 >More info GR-bdl IAA Original data GEO bulk
22 oas-a1.1 root -0.71 >More info -0.52 >More info WT-Untreated Root Original data GEO bulk
23 24h volatiles Sm. R3089 0.80 >More info 0.43 >More info 24h untreated whole seedling Original data GEO bulk
24 2d dark-grown WT(Col-0)/1 hr red light -0.72 >More info -0.50 >More info 2d dark-grown WT seedling Original data GEO bulk
25 Light 4h steady-state -0.77 >More info -0.45 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
26 myb61 xylem 0.75 >More info 0.46 >More info wt xylem xylem Original data GEO bulk
27 sav3-2 shade -0.75 >More info -0.46 >More info Col-0 shade seedlings Original data GEO bulk
28 Light 4h polysome-bound -0.79 >More info -0.42 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
29 Mutant arf2-6 (IAA) 0.82 >More info 0.39 >More info Col (IAA) Original data GEO bulk
30 Mutant sav3-2 (SH) -0.75 >More info -0.46 >More info Col-0 (SH) Original data GEO bulk
31 Sha-30min IAA 0.82 >More info 0.38 >More info Sha-0h IAA whole plant Original data GEO bulk
32 ABA 1 h -0.62 >More info -0.57 >More info Mock 1 h Original data Basic hormone treatment of seedlings
33 WT Red light 1h -0.71 >More info -0.48 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
34 low R/FR mock spray 0.70 >More info 0.47 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
35 HS -0.81 >More info -0.36 >More info noneHS Original data GEO bulk
36 4C 1h 0.75 >More info 0.42 >More info 4C 0h Original data GEO bulk
37 Shoot -Cs -0.76 >More info -0.40 >More info Control-shoot Original data GEO bulk
38 Bay-0-1h IAA 0.80 >More info 0.35 >More info Bay-0-0h IAA whole plant Original data GEO bulk
39 Salt Stress 24 h (shoot) -0.79 >More info -0.35 >More info Stress mock 24 h (shoot) Original data Stress treatments
40 rosette Dark Wounded -0.68 >More info -0.46 >More info rosette Dark Control Original data GEO bulk
41 C24-1h IAA 0.75 >More info 0.39 >More info C24-0h IAA whole plant Original data GEO bulk
42 petiole in FRD 0.80 >More info 0.34 >More info petiole in WL petioles Original data GEO bulk
43 Day Time Treatment -0.70 >More info -0.44 >More info Day Time Control 1hr white light pulse aerial rosette Original data
44 Sha-1h IAA 0.82 >More info 0.32 >More info Sha-0h IAA whole plant Original data GEO bulk
45 Chemically 0.72 >More info 0.42 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
46 Heat no recovery -0.74 >More info -0.39 >More info Mock no recovery seedling Original data GEO bulk
47 MPK6 ox Shoot Hypoxia -0.71 >More info -0.41 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
48 phyABDE 4-day dark- 2 hours Rc50 -0.66 >More info -0.45 >More info phyABDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
49 WT hypoxia 0.82 >More info 0.29 >More info WT normoxia whole rosette Original data
50 pif4pif5 mut 24h FR -0.75 >More info -0.35 >More info WT 24h FR Original data GEO bulk
51 dark-hs -0.64 >More info -0.45 >More info dark-control seedling Original data
52 C24-30min IAA 0.87 >More info 0.22 >More info C24-0h IAA whole plant Original data GEO bulk
53 Laer pretreat GA Flg22 1h 0.38 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
54 Cd 18h root -0.69 >More info -0.39 >More info WT-Untreated Root Original data GEO bulk
55 swn-7 0.60 >More info 0.48 >More info Col whole plant Original data GEO bulk
56 AVG 3 h -0.65 >More info -0.43 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
57 Mutant iaa5_6_19 -0.77 >More info -0.30 >More info Col Original data GEO bulk
58 Fenclorim 24hr -0.71 >More info -0.36 >More info Acetone 24hr root Original data GEO bulk
59 ein2 -0.59 >More info -0.48 >More info Col-0 Leaves Original data GEO bulk
60 Col-0 DEX Shade 0.83 >More info 0.24 >More info Col-0 DEX WL seedlings Original data
61 Heat -0.67 >More info -0.39 >More info Control 90 minutes at 38°C. Original data GEO bulk
62 Anoxia -0.80 >More info -0.26 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
63 low R/FR JA spray 0.66 >More info 0.39 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
64 seedling 24h after Gamma WT -0.73 >More info -0.32 >More info seedling day 2 unirradiated WT 24h Original data
65 WT salt 12 h -0.75 >More info -0.30 >More info WT salt 0 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
66 Paclobutrazol 12 h -0.65 >More info -0.40 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
67 sng1 -0.67 >More info -0.38 >More info WT aerial region Original data GEO bulk
68 light-hs -0.67 >More info -0.38 >More info light-control seedling Original data
69 ptpks2 -0.42 >More info -0.63 >More info Col-WT leaves Original data GEO bulk
70 12h Col-0 -0.84 >More info -0.20 >More info 00h Col-0 Original data GEO bulk
71 IAA 3 h 0.60 >More info 0.44 >More info Mock 3 h Original data Basic hormone treatment of seedlings
72 Mutant iaa17-6 -0.70 >More info -0.33 >More info Col Original data GEO bulk
73 leaf blade in FRD 0.77 >More info 0.26 >More info leaf blade in WL leaf blades Original data GEO bulk
74 Elevated CO2 fully expanded leaf -0.73 >More info -0.29 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
75 essp4/sdg8-5 mutant -0.65 >More info -0.37 >More info wild type leaf Original data GEO bulk
76 det2 light-dark 0.75 >More info 0.27 >More info det2 light light-dark Original data GEO bulk
77 35S::KLU -0.67 >More info -0.35 >More info WT Shoot Original data
78 30m light -0.55 >More info -0.47 >More info before light whole seedlings Original data GEO bulk
79 low water potential -0.74 >More info -0.28 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
80 Seedling-HeatStressed TOTALmRNA -0.69 >More info -0.33 >More info Seedling-control TOTALmRNA seedling Original data
81 Heat 6h -0.73 >More info -0.28 >More info At mock rosettes - 5 leaves stage Original data
82 Col-0 HS -0.70 >More info -0.31 >More info Col-0 control heat shocked seedling Original data GEO bulk
83 WT (Col-0) heat shock -0.70 >More info -0.31 >More info WT (Col-0) whole seedling Original data GEO bulk
84 Fei-0-30min IAA 0.75 >More info 0.26 >More info Fei-0-0h IAA whole plant Original data GEO bulk
85 atsf1-2 mutant seedling -0.64 >More info -0.37 >More info Col-0 seedling seedlings Original data
86 myb61 cork 0.73 >More info 0.28 >More info wt cork cork Original data GEO bulk
87 WT seedlings IAA 0.61 >More info 0.40 >More info WT seedlings control Seedlings Original data GEO bulk
88 Osmotic Stress 24 h (shoot) -0.73 >More info -0.27 >More info Stress mock 24 h (shoot) Original data Stress treatments
89 Col leaf scrape 5 dpi -0.71 >More info -0.29 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
90 Heat 6h-recover 48h 0.73 >More info 0.27 >More info Heat 6h rosettes - 5 leaves stage Original data
91 WT(Ler) Rc50 -0.65 >More info -0.35 >More info WT(Ler) Dark Original data GEO bulk
92 Imidazolinone EC50 -0.75 >More info -0.24 >More info Carrier (Imidazolinone) Original data GEO bulk
93 Mutant cry1 (High Light) 0.56 >More info 0.43 >More info Col-0 (High Light) Original data GEO bulk
94 hypoxic -0.69 >More info -0.30 >More info WT aerobic hypoxia Original data GEO bulk
95 Seedling-HeatStressed POLYSOMESmRNA -0.70 >More info -0.29 >More info Seedling-control POLYSOMESmRNA seedling Original data
96 C58 3hpi 0.78 >More info 0.21 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
97 SLWF infested -0.77 >More info -0.22 >More info SLWF uninfested rosette tissue Original data GEO bulk
98 cry1 high light 0.56 >More info 0.43 >More info Col-O high light Original data GEO bulk
99 sicy-192 gun1-101 cotyledons -0.69 >More info -0.30 >More info WT cotyledons cotyledons Original data
100 A2hsfa1-ox in quadruple mutant -0.60 >More info -0.38 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
101 WT Rc50 -0.65 >More info -0.33 >More info WT Dark red light whole seedling Original data GEO bulk
102 shl-2 Pool 0.54 >More info 0.44 >More info Ler Pool seedling Original data GEO bulk
103 Heat shock 20%Inhibition -0.62 >More info -0.36 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
104 edm2-2 untreated 0.84 >More info 0.13 >More info Col-0 untreated seedlings Original data GEO bulk
105 columella auxin 0.65 >More info 0.32 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
106 Heat and anoxia -0.67 >More info -0.30 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
107 pXVE:HA-EDM2-a untreated 0.82 >More info 0.15 >More info Col-0 untreated seedlings Original data GEO bulk
108 Mutant nph4-1_arf19-1 (IAA) -0.74 >More info -0.23 >More info Col (IAA) Original data GEO bulk
109 MYB12OX/tt4 0.68 >More info 0.29 >More info Col-0 aerial part Original data
110 35S-MIF1 dark grown -0.51 >More info -0.46 >More info Dark-grown WT control Original data GEO bulk
111 des1 water -0.74 >More info -0.23 >More info WT water water leaf Original data GEO bulk
112 gun1gun5 far-red pretreated 0.64 >More info 0.33 >More info WT far-red pretreated Original data GEO bulk
113 seedlings by volatiles from leafminer damaged
Lima bean 48h		 -0.65 >More info -0.32 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
114 IRP1-OE-Ctrl--shoot -0.77 >More info -0.20 >More info COL-0-Ctrl--shoot shoot Original data
115 phyABCDE Dark -0.81 >More info -0.15 >More info WT Dark Dark whole seedling Original data GEO bulk
116 Sulfometuron EC50 -0.79 >More info -0.17 >More info Carrier Original data GEO bulk
117 WT NAA 1h 0.50 >More info 0.46 >More info WT 0h Leaf tissue Original data GEO bulk
118 rosettes drought -0.70 >More info -0.26 >More info rosettes watered Original data GEO bulk
119 whole roots 140 mM NaCl 1 hour -0.77 >More info -0.19 >More info whole roots standard Original data GEO bulk
120 3d old, both 10mM sucrose and 0.2µM SMX -0.53 >More info -0.43 >More info control Whole seedling Original data GEO bulk
121 Tsu -Fe 48h Shoots -0.70 >More info -0.26 >More info Tsu +Fe 24h Shoots Original data GEO bulk
122 WT (Ler) CK25 -0.53 >More info -0.43 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
123 Ws HS -0.67 >More info -0.28 >More info Ws control heat shocked seedling Original data GEO bulk
124 cat2-2; 8h switch to ambient CO2 concentrations; -0.67 >More info -0.28 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
125 AZC -0.78 >More info -0.17 >More info noneHS Original data GEO bulk
126 exo70A1 0.80 >More info 0.15 >More info Col-0 whole plant Original data GEO bulk
127 bZIP1ko mutant N+Light- -0.56 >More info -0.39 >More info WT-sib N+Light- whole plant Original data GEO bulk
128 pip3 At2g19270 RNAi 32 -0.77 >More info -0.18 >More info Nd-1 whole plant Original data GEO bulk
129 Nuclear GSH2 0.74 >More info 0.21 >More info Cytoplasmic GSH2 Control Original data GEO bulk
130 Col-0 37C -0.66 >More info -0.29 >More info Col-0 22C Original data GEO bulk
131 WT(Ler) Rc15 -0.62 >More info -0.33 >More info WT(Ler) Dark Original data GEO bulk
132 pip3 At2g19270 TDNA 6h-1 -0.76 >More info -0.19 >More info Col-0 whole plant Original data GEO bulk
133 Fenclorim 4hr -0.77 >More info -0.18 >More info Acetone 4hr root Original data GEO bulk
134 Col-0 shade 0.51 >More info 0.44 >More info Col-0 light seedlings Original data GEO bulk
135 Col-0 WT HL 3h -0.64 >More info -0.30 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
136 rosettes myoox drought -0.74 >More info -0.20 >More info rosettes myoox watered Original data GEO bulk
137 MYB29 OE -0.64 >More info -0.30 >More info WT for MYB29/76 Original data GEO bulk
138 shoot hypoxia pSUC2 -0.75 >More info -0.19 >More info shoot hypoxia total Original data GEO bulk
139 WT Shoot-Pi -0.65 >More info -0.29 >More info WT Shoot+Pi shoots Original data GEO bulk
140 Heat shock 30%Inhibition -0.64 >More info -0.30 >More info Heat shock baseline Photosynthesis at 30% inhibition from optimum leaf first fully expanded Original data GEO bulk
141 Col-0 drought -0.59 >More info -0.35 >More info Col-0 control Original data GEO bulk
142 Brassinolide 1 h (det2) 0.37 >More info 0.57 >More info Mock 1 h (det2) Original data Basic hormone treatment of seedlings
143 IAA7mII over-expressor IAA Treated 0.25 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
144 camta1 leaf water 0.65 >More info 0.28 >More info Col-0 leaf water leaf Original data GEO bulk
145 COL-0-Fe--shoot -0.68 >More info -0.25 >More info COL-0-Ctrl--shoot shoot Original data
146 Root submergence 7h 0.65 >More info 0.28 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
147 Bay-0-3h IAA 0.73 >More info 0.20 >More info Bay-0-0h IAA whole plant Original data GEO bulk
148 AvrRpt2 Col-0 6hpi -0.70 >More info -0.23 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
149 sid2 0.62 >More info 0.31 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
150 arr-BA-sample 0.61 >More info 0.32 >More info Wt-BA-sample seedling Original data
151 psae1-3 0.69 >More info 0.24 >More info WS rosette leaves Original data GEO bulk
152 Prohexadione 12 h -0.62 >More info -0.31 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
153 Apex mir-319b 17DAS -0.71 >More info -0.22 >More info Apex Col 14DAS Original data GEO bulk
154 Bay-0-30min IAA 0.67 >More info 0.25 >More info Bay-0-0h IAA whole plant Original data GEO bulk
155 rosettes WT drought -0.65 >More info -0.27 >More info rosettes WT watered Original data GEO bulk
156 mutant acs6E (single mutant) -0.68 >More info -0.24 >More info col control (single mutant) Original data GEO bulk
157 wnk8-3 untreated 0.84 >More info 0.08 >More info Col-0 untreated seedlings Original data GEO bulk
158 epidermis auxin 0.70 >More info 0.22 >More info epidermis control 5 uM indole-3-acetic acid epidermis Original data GEO bulk
159 Root dark control 24h 0.60 >More info 0.32 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
160 10mM sucrose -0.58 >More info -0.34 >More info control Whole seedling Original data GEO bulk
161 Mature callus -0.67 >More info -0.24 >More info Young callus hypocotyls Original data GEO bulk
162 WOX1-1 0.63 >More info 0.28 >More info Col-0 aerial part Original data
163 lht1 untreated -0.67 >More info -0.24 >More info WT untreated untreated leaf Original data GEO bulk
164 WT H2O2 3h -0.73 >More info -0.18 >More info WT water 3h 3h_H2O2 Original data GEO bulk
165 Col-0 low R/FR 0.60 >More info 0.31 >More info Col-0 high R/FR low R/FR seedlings Original data GEO bulk
166 Root submergence 24h 0.62 >More info 0.29 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
167 sav3-2 light -0.69 >More info -0.22 >More info Col-0 light seedlings Original data GEO bulk
168 Mutant sav3-2 (WL) -0.69 >More info -0.22 >More info Col-0 (WL) Original data GEO bulk
169 sdg8-2 mutant -0.61 >More info -0.30 >More info wild type leaf Original data GEO bulk
170 Var2-1 roots 2hr KCl control 0.62 >More info 0.28 >More info Col0 roots 2hr KCl control root Original data GEO bulk
171 WT-SA -0.68 >More info -0.22 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
172 amiRAP hypoxic 0.51 >More info 0.39 >More info hypoxic hypoxia Original data GEO bulk
173 ice1 6H Cold -0.70 >More info -0.20 >More info WT 6H Cold Original data GEO bulk
174 psad1-1 stn7-1 0.82 >More info 0.08 >More info Col-0 rosette leaves Original data GEO bulk
175 12h volatiles Sm. R3089 0.76 >More info 0.13 >More info 12h untreated whole seedling Original data GEO bulk
176 Pst-DC3000(avrRpm1)-4hpi -0.63 >More info -0.26 >More info Pst-DC3000-4hpi Original data GEO bulk
177 Sha-3h IAA 0.73 >More info 0.16 >More info Sha-0h IAA whole plant Original data GEO bulk
178 cell culture 4 h phytoprostane A1 -0.72 >More info -0.17 >More info cell culture 4 h control Original data GEO bulk
179 WT 90-105 min Xanthomonas -0.71 >More info -0.18 >More info WT T0 Original data GEO bulk
180 piffq FR 1h -0.72 >More info -0.16 >More info WT FR 1h whole seedling Original data GEO bulk
181 Mutant nph4-1_arf19-1 -0.71 >More info -0.17 >More info Col Original data GEO bulk
182 Col-7 Sucrose -0.67 >More info -0.21 >More info col-7 Original data GEO bulk
183 Kas2 roots 2hr KCl control 0.65 >More info 0.23 >More info Col0 roots 2hr KCl control root Original data GEO bulk
184 ABA 0.5 h -0.35 >More info -0.53 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
185 Col-0 flu HL 3h -0.69 >More info -0.19 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
186 Uniconazole 3 h -0.69 >More info -0.19 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
187 ABA 3 h -0.58 >More info -0.30 >More info Mock 3 h Original data Basic hormone treatment of seedlings
188 Mutant nph4-1 -0.69 >More info -0.19 >More info Col Original data GEO bulk
189 WT Col-0 Bgh inoculated -0.70 >More info -0.18 >More info WT Col-0 Un-inoculated Original data GEO bulk
190 inhibitor A Treated -0.68 >More info -0.19 >More info Negative Control Original data GEO bulk
191 UV -0.68 >More info -0.19 >More info WT aerial region Original data GEO bulk
192 WT leaf-drought -0.70 >More info -0.17 >More info WT leaf-well watered Original data GEO bulk
193 pip3 At2g19270 RNAi 24 -0.66 >More info -0.21 >More info Nd-1 whole plant Original data GEO bulk
194 RPL18 TuMV inoculated polysomal RNA -0.71 >More info -0.16 >More info mock inoculated polysomal RNA PO Original data GEO bulk
195 ex1 flu dark 8hours/30 minute light 0.73 >More info 0.14 >More info col dark 8hours/30 minute light Original data GEO bulk
196 WT heat shock -0.70 >More info -0.17 >More info WT untreated above-ground parts Original data GEO bulk
197 Cor 24h -0.61 >More info -0.26 >More info Mock 24h Cor Original data GEO bulk
198 A2hsfa1-ox in quadruple mutant heat shock -0.75 >More info -0.12 >More info hsfa1 quadruple mutant heat shock whole seedling Original data GEO bulk
199 Hydrogen Peroxide 500 uM -0.70 >More info -0.17 >More info Control RB and PER Hydrogen Peroxide Original data
200 T8 leaf-drought -0.66 >More info -0.20 >More info T8 leaf-well watered Original data GEO bulk
201 aox1a(line) MLD stressed -0.68 >More info -0.18 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
202 WT-drought -0.85 >More info -0.01 >More info WT-control leaf Original data
203 17 0h total 0.75 >More info 0.11 >More info 27 0h total whole seedlings floating on MS medium Original data
204 Mutant nph4-1 (IAA) -0.65 >More info -0.21 >More info Col (IAA) Original data GEO bulk
205 TAMM27 roots 2hr KCl control 0.60 >More info 0.26 >More info Col0 roots 2hr KCl control root Original data GEO bulk
206 lht1 PstDC3000 48h -0.69 >More info -0.17 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
207 root callus inducing medium 96 h 0.74 >More info 0.12 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
208 csn5 (csn5a-2 csn5b) light -0.71 >More info -0.15 >More info WT light Original data GEO bulk
209 MYB76 OE -0.62 >More info -0.24 >More info WT for MYB29/76 Original data GEO bulk
210 rli -0.73 >More info -0.13 >More info WT whole plant Original data GEO bulk
211 root longitudinal zone-4 low sulfur 0.63 >More info 0.23 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
212 stn7-1 0.80 >More info 0.05 >More info Col-0 rosette leaves Original data GEO bulk
213 psad1 0.67 >More info 0.18 >More info WS rosette leaves Original data GEO bulk
214 Root dark control 7h 0.54 >More info 0.31 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
215 FAMA induced 48h -0.71 >More info -0.14 >More info control 48h Whole seedling Original data GEO bulk
216 phyABDE Dark -0.71 >More info -0.14 >More info WT Dark Dark whole seedling Original data GEO bulk
217 npr1 sni1 brca2a -0.57 >More info -0.28 >More info npr1 sni1 water water seedling Original data GEO bulk
218 WT Na2S -0.61 >More info -0.24 >More info WT water Na2S leaf Original data GEO bulk
219 WT 1wk -P -0.63 >More info -0.22 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
220 apk1 apk2 -0.58 >More info -0.27 >More info Col0-control whole rosette Original data GEO bulk
221 TaFLS overexpression line (OE2) 0.84 >More info 0.01 >More info Col-0 Rosette leaves Original data
222 auxin and brassinazole seedlings -0.75 >More info -0.10 >More info auxin seedlings Original data GEO bulk
223 CHS-silenced type 0.76 >More info 0.09 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
224 seedling 24h after Gamma atm-1 -0.58 >More info -0.27 >More info seedling day 2 unirradiated atm-1 24h Original data
225 AmGSTF1 expressor 0.63 >More info 0.22 >More info WT leaf tissue Original data GEO bulk
226 anac017-2 H2O2 3h 0.57 >More info 0.28 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
227 Dark 4 h pls UV-AB 5min -0.60 >More info -0.25 >More info Dark 4 h Original data Light treatments
228 Shoot dark control 24h 0.55 >More info 0.29 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
229 phr1 phl1 Root-Pi -0.56 >More info -0.28 >More info WT Shoot+Pi roots Original data GEO bulk
230 4h decapitation -0.52 >More info -0.32 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
231 ASL9-ox 0.65 >More info 0.19 >More info WT aerial parts of seedlings Original data GEO bulk
232 B.cinerea 18 h infection -0.56 >More info -0.28 >More info Mock 18 h Original data Botrytis cinerea infection
233 Botrytis cinerea 18h -0.56 >More info -0.28 >More info control 18h Original data GEO bulk
234 csn3-1 light -0.70 >More info -0.14 >More info WT light Original data GEO bulk
235 KAN1-GR 60min -0.63 >More info -0.21 >More info KAN1-GR 0min Original data GEO bulk
236 root - 01% oxygen - 48h -0.57 >More info -0.27 >More info root - 21% oxygen - 48h Original data GEO bulk
237 1.5 hr ammonium 0.63 >More info 0.21 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
238 Col-0-30min IAA 0.75 >More info 0.09 >More info Col-0-0h IAA whole plant Original data GEO bulk
239 sfr3 control -0.61 >More info -0.23 >More info WT control All aerial tissue Original data GEO bulk
240 ABA -0.62 >More info -0.22 >More info control Original data GEO bulk
241 root longitudinal zone-3 NaCl -0.57 >More info -0.27 >More info root longitudinal zone-3 Original data GEO bulk
242 Bur-0-1h IAA 0.73 >More info 0.11 >More info Bur-0h IAA whole plant Original data GEO bulk
243 3x(m) 0.14 >More info 0.70 >More info 2x two week old seedlings Original data
244 GV3101 3hpi 0.66 >More info 0.17 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
245 Col-0 Root 100 mM ATP 30 min 0.67 >More info 0.16 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
246 flu -0.68 >More info -0.15 >More info WT Col Original data GEO bulk
247 ara1/2mut -0.66 >More info -0.17 >More info Col-3 Original data GEO bulk
248 Fei-0-1h IAA 0.63 >More info 0.20 >More info Fei-0-0h IAA whole plant Original data GEO bulk
249 21h-DC3000 avrRpm1 0.64 >More info 0.19 >More info 21h-DC3000 leaves Original data GEO bulk
250 root endodermis and quiescent center 40 mM NaCl -0.63 >More info -0.20 >More info root endodermis and quiescent center Original data GEO bulk
251 flu over-tAPX -0.67 >More info -0.16 >More info WT Col Original data GEO bulk
252 Primisulfuron EC50 -0.74 >More info -0.09 >More info Carrier (primisulfuron) Original data GEO bulk
253 IAA/inhibitor A Treated -0.74 >More info -0.09 >More info IAA Treated Original data GEO bulk
254 eif3h non-polysome -0.59 >More info -0.24 >More info WT non-polysome Original data GEO bulk
255 Col-0 Mock Shade 0.61 >More info 0.22 >More info Col-0 Mock WL seedlings Original data
256 piffq FR 3h -0.60 >More info -0.23 >More info WT FR 3h whole seedling Original data GEO bulk
257 rao2 H2O2 3h 0.71 >More info 0.12 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
258 cop1 Seedling BL -0.72 >More info -0.11 >More info WT Seedling BL Original data GEO bulk
259 MIL4 ox 0.61 >More info 0.22 >More info Col Original data GEO bulk
260 wnk8-1 untreated 0.72 >More info 0.11 >More info Col-0 untreated seedlings Original data GEO bulk
261 48 h S WT 0.59 >More info 0.24 >More info 0 h WT seed Original data
262 ice1 3H Cold -0.67 >More info -0.15 >More info WT 3H Cold Original data GEO bulk
263 04h Col-0 -0.62 >More info -0.20 >More info 00h Col-0 Original data GEO bulk
264 ABA SA 3h -0.62 >More info -0.20 >More info EtOH 3h 3hr Original data GEO bulk
265 2 h EST 0.66 >More info 0.16 >More info mock 2 h EST seedling Original data GEO bulk
266 Col whole leaf 6hpi -0.78 >More info -0.04 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
267 2xX4x interploidy cross 0.66 >More info 0.16 >More info 2xX2x cross Original data GEO bulk
268 CMP 24hr -0.63 >More info -0.19 >More info Acetone 24hr root Original data GEO bulk
269 iron minus 6 h -0.72 >More info -0.10 >More info iron +6 h root Original data GEO bulk
270 Mutant arf19-1 -0.60 >More info -0.22 >More info Col Original data GEO bulk
271 SPT4-R3 seedlings0 DAS -0.59 >More info -0.23 >More info Col-0 seedlings0 DAS seedlings Original data
272 MG132 3 h -0.73 >More info -0.09 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
273 mutant acs2B (single mutant) -0.70 >More info -0.12 >More info col control (single mutant) Original data GEO bulk
274 Te CA -0.74 >More info -0.08 >More info Col CA Leaves Original data
275 48 h S Attim 17-1 1 0.62 >More info 0.19 >More info 0 h Attim 17-1 1 seed Original data
276 Heat Recovery 24 h (shoot) -0.56 >More info -0.25 >More info Stress mock 24 h (shoot) Original data Stress treatments
277 RRE1 Chitin -0.64 >More info -0.17 >More info Chitin Original data GEO bulk
278 P.p 10.5hai 0.53 >More info 0.28 >More info At-Control roots Original data GEO bulk
279 myb21 myb24 stage3 -0.67 >More info -0.14 >More info WT stage3 Original data GEO bulk
280 Col-0 INA 6d 0.66 >More info 0.15 >More info Col-0 MOCK 6d Original data GEO bulk
281 TaFLS overexpression line (OE1) 0.75 >More info 0.06 >More info Col-0 Rosette leaves Original data
282 17 2h unlabelled 0.59 >More info 0.22 >More info 27 1h unlabelled 1.5mM 4SU added at h whole seedlings floating on MS medium Original data
283 sicy-192 cotyledons -0.70 >More info -0.11 >More info WT cotyledons cotyledons Original data
284 phr1 Shoot-Pi 0.51 >More info 0.29 >More info WT Root-Pi shoots Original data GEO bulk
285 WT+H2O2 -0.73 >More info -0.07 >More info WT H2O2 Original data GEO bulk
286 Dry late day -0.65 >More info -0.15 >More info Wet late day water-limited whole rosette Original data GEO bulk
287 phr1 phl1 Shoot-Pi 0.55 >More info 0.25 >More info WT Shoot-Pi shoots Original data GEO bulk
288 Apex octa 18DAS -0.66 >More info -0.14 >More info Apex Col 14DAS Original data GEO bulk
289 seedling 1.5h after Gamma atm-1 -0.66 >More info -0.14 >More info seedling day 1 unirradiated atm-1 1.5h Original data
290 Triazolopyrimidine EC50 -0.67 >More info -0.13 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
291 safener treated -0.75 >More info -0.05 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
292 rcf1-1 cold 12h -0.55 >More info -0.25 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
293 Bur-0-30min IAA 0.75 >More info 0.05 >More info Bur-0h IAA whole plant Original data GEO bulk
294 WT seedlings MV -0.59 >More info -0.21 >More info WT seedlings control Seedlings Original data GEO bulk
295 mutant acs9B (single mutant) 0.58 >More info 0.22 >More info col control (single mutant) Original data GEO bulk
296 coi1 -0.71 >More info -0.09 >More info Col-0 Leaves Original data GEO bulk
297 seedling 1.5h after Gamma WT -0.69 >More info -0.11 >More info seedling day 1 unirradiated WT 1.5h Original data
298 max3GR24 (1 uM) -0.51 >More info -0.28 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
299 Shoot dark control 7h 0.50 >More info 0.29 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
300 T6 leaf-drought -0.66 >More info -0.13 >More info T6 leaf-well watered Original data GEO bulk
301 E.orontii Infection 3 day 0.65 >More info 0.14 >More info Uninfection 3 day Original data Elicitor treatments
302 Dry midday -0.62 >More info -0.17 >More info Wet midday water-limited whole rosette Original data GEO bulk
303 Mutant cry1 0.53 >More info 0.26 >More info Col-0 Original data GEO bulk
304 Time-0 chr11-1chr17-1 0.72 >More info 0.07 >More info Time-0 Col-0 leaf explants Original data
305 Botrytis cinerea 48h -0.50 >More info -0.29 >More info control 48h Original data GEO bulk
306 aox1a(line) untreated 0.79 >More info -0.00 >More info WT(Col0) untreated (control aox1a) leaf Original data
307 Nuclear GSH1 0.65 >More info 0.14 >More info Cytoplasmic GSH1 Control Original data GEO bulk
308 Ts5 roots 2hr KNO3 nitrogen 0.61 >More info 0.18 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
309 elf3-7-16ºC -0.53 >More info -0.26 >More info WT-16ºC Original data GEO bulk
310 cry1 low light 0.53 >More info 0.26 >More info Col-O low light Original data GEO bulk
311 GR:KAN1 DEX Shade -0.70 >More info -0.09 >More info GR:KAN1 Mock Shade seedlings Original data
312 Col-0 ozone -0.69 >More info -0.10 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
313 Brz220 3 h -0.68 >More info -0.10 >More info Mock 3 h Original data Effect of brassinosteroid inhibitors on seedlings
314 ice1 control -0.62 >More info -0.16 >More info WT control Original data GEO bulk
315 Col-0 root drought -0.56 >More info -0.22 >More info Col-0 root water root Original data GEO bulk
316 npr1 sni1 ssn2 -0.74 >More info -0.04 >More info npr1 sni1 water water seedling Original data GEO bulk
317 camta1 leaf drought 0.63 >More info 0.15 >More info Col-0 leaf drought leaf Original data GEO bulk
318 17 2h total 0.55 >More info 0.23 >More info 27 1h total 1.5mM 4SU added at h whole seedlings floating on MS medium Original data
319 col-5 hrpA 2h -0.75 >More info -0.03 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
320 RPL18 TuMV inoculated total RNA -0.65 >More info -0.13 >More info mock inoculated total RNA PO Original data GEO bulk
321 ref6-1 -0.73 >More info -0.05 >More info Col whole seedling Original data GEO bulk
322 Wounding Stress3 h (shoot) -0.62 >More info -0.16 >More info Stress mock 3 h (shoot) Original data Stress treatments
323 oas-a1.1 shoot -0.73 >More info -0.05 >More info WT-Untreated Shoot Original data GEO bulk
324 Wounding Stress3 h (root) 0.62 >More info 0.15 >More info Stress mock 3 h (root) Original data Stress treatments
325 pil5 red light -0.67 >More info -0.10 >More info Col-0 red light Original data GEO bulk
326 etiolated cop1BBX22-GFPox -0.56 >More info -0.21 >More info etiolated Col-0 whole seedlings Original data GEO bulk
327 cca1-lhy 30m light 0.50 >More info 0.27 >More info 30m light whole seedlings Original data GEO bulk
328 csn4-1 mutant -0.72 >More info -0.05 >More info WT dark Original data GEO bulk
329 abi4-102 -lincomycin 0.73 >More info 0.04 >More info Col-0 -lincomycin Original data GEO bulk
330 cca1-lhy before light 0.52 >More info 0.25 >More info before light whole seedlings Original data GEO bulk
331 piffq 3d WL -0.72 >More info -0.05 >More info WT 3d WL whole seedling Original data GEO bulk
332 cngc19 -0.57 >More info -0.20 >More info Col-0 root Original data GEO bulk
333 GR-REV 60min 0.59 >More info 0.18 >More info Col 60min Original data GEO bulk
334 penta Alternaria 3dpi -0.69 >More info -0.08 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
335 seedling 24h after HZE WT -0.73 >More info -0.03 >More info seedling day 2 unirradiated WT 24h Original data
336 Col-0 ozone- (control genotype coi1-16 ein2 sid2) -0.69 >More info -0.07 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
337 ago1-27 0.55 >More info 0.21 >More info Col-0 vegetative apex Original data GEO bulk
338 Col-0 under 4 days salt -0.64 >More info -0.12 >More info Col-0 under control 4 days salt treatment rosette Original data
339 4C 0h 0.62 >More info 0.14 >More info 22C 0h Original data GEO bulk
340 HSP90 Reduced RNAi-C1 -0.67 >More info -0.09 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
341 CCA14 dark late 0.66 >More info 0.10 >More info Col dark late Original data GEO bulk
342 Ws-2 high light -0.72 >More info -0.04 >More info Ws-2 low light Original data GEO bulk
343 rosettes atx drought -0.54 >More info -0.22 >More info rosettes atx watered Original data GEO bulk
344 WT-Dry -0.65 >More info -0.11 >More info WT-CK dehydration treatment 1h Original data
345 root callus inducing medium 48 h 0.70 >More info 0.06 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
346 seedlings + TSA 0.60 >More info 0.16 >More info control seedlings 10-day old whole seedling Original data GEO bulk
347 ataf1-1 mutant Col-0 Bgh inoculated -0.64 >More info -0.12 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
348 SQ8 roots 2hr KCl control 0.61 >More info 0.15 >More info Col0 roots 2hr KCl control root Original data GEO bulk
349 atmyc2 cop1 Seedling BL -0.67 >More info -0.09 >More info WT Seedling BL Original data GEO bulk
350 Rose Bengal 0.5 uM -0.73 >More info -0.02 >More info Control RB and PER Rose Bengal Original data
351 Nuclear GSH3 -0.61 >More info -0.14 >More info Cytoplasmic GSH3 Media change Original data GEO bulk
352 hy5 low light 0.75 >More info 0.00 >More info Col-O low light Original data GEO bulk
353 E.orontii Infection 6 h 0.55 >More info 0.20 >More info Uninfection 6 h Original data Elicitor treatments
354 0.2µM SMX 0.60 >More info 0.15 >More info control Whole seedling Original data GEO bulk
355 eds16 whole leaf 5dpi 0.65 >More info 0.10 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
356 JA -0.50 >More info -0.25 >More info Col-0 mock Whole seedling Original data GEO bulk
357 Atss3 Dark8 0.65 >More info 0.10 >More info Atss3 Dark0.5 Original data GEO bulk
358 Mutant hy5 0.75 >More info 0.00 >More info Col-0 Original data GEO bulk
359 clf-28 swn-7 -0.66 >More info -0.09 >More info Col whole plant Original data GEO bulk
360 npr1-3 DCA 48h -0.63 >More info -0.12 >More info npr1-3 MOCK 48h Original data GEO bulk
361 Col-0 24hpi A. brassicicola -0.77 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
362 Cd 24h root 0.70 >More info 0.05 >More info WT-Untreated Shoot Original data GEO bulk
363 coi1-16 ein2 sid2 ozone -0.71 >More info -0.04 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
364 pvip1 pvip2 -0.59 >More info -0.16 >More info Col-0 whole rosettes Original data GEO bulk
365 Shoot -K -0.60 >More info -0.15 >More info Control-shoot Original data GEO bulk
366 K starvation (shoot) -0.60 >More info -0.15 >More info Ws (shoot) Original data GEO bulk
367 Pst-DC3000(hrpA)-4hpi -0.12 >More info -0.63 >More info Pst-DC3000-4hpi Original data GEO bulk
368 Col BTH 0.08 >More info 0.67 >More info Col rosettes Original data GEO bulk
369 treated group -0.63 >More info -0.11 >More info Control group Original data
370 arf6 arf8 stage3 -0.67 >More info -0.07 >More info WT stage3 Original data GEO bulk
371 upf1 -0.66 >More info -0.08 >More info WT whole plant Original data GEO bulk
372 erf5 erf6 0.72 >More info 0.02 >More info WT+water water seedlings Original data GEO bulk
373 SCL3 OE -0.69 >More info -0.05 >More info Col-0 whole root Original data GEO bulk
374 gir root 4%glc 0.55 >More info 0.19 >More info Col-7 root 4%glc root Original data GEO bulk
375 cat2-long-day 2d 0.71 >More info 0.03 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
376 Lip0 UV -0.65 >More info -0.09 >More info Lip0 mock UV seedling Original data
377 Col-0 ozone- (control genotype tga2 tag5 tga6) -0.69 >More info -0.05 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
378 Dark 4 h pls UV-A 5 min -0.50 >More info -0.24 >More info Dark 4 h Original data Light treatments
379 plant (tga2-5-6) 4h phytoprostane A1 -0.61 >More info -0.13 >More info plant (tga2-5-6) 4h control Original data GEO bulk
380 Col-0 low oxygen -0.61 >More info -0.13 >More info Col-0 Original data GEO bulk
381 ein2-1 24hpi A. brassicicola -0.55 >More info -0.19 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
382 edr1 18 h powdery mildew -0.72 >More info -0.02 >More info Col-0 18 h powdery mildew Original data GEO bulk
383 Total RNA csp1 cold 0.71 >More info 0.02 >More info Total RNA csp1 12h cold (4C) rosettes Original data GEO bulk
384 P. infestans 6 h (leaf) -0.58 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
385 Propiconazole 12 h -0.63 >More info -0.10 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
386 Mutant gh3.5-1D -0.54 >More info -0.19 >More info Col-0 Original data GEO bulk
387 rpoTmp(line) MLD stressed -0.66 >More info -0.07 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
388 Dark 3day ivd -0.77 >More info 0.04 >More info 0h ivd Original data
389 WT in -N -0.60 >More info -0.13 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
390 FLIGHT BRIC G PDFU-359 tissue -0.69 >More info -0.04 >More info GROUND BRIC G PDFU-255 tissue cultured cells Original data
391 nia1nia2 -0.59 >More info -0.14 >More info Col-0 whole seedlings Original data GEO bulk
392 Base wox4 0.59 >More info 0.14 >More info Base Col base of stem Original data GEO bulk
393 hsfa1 quadruple mutant heat shock 0.53 >More info 0.20 >More info WT (Col-0) heat shock whole seedling Original data GEO bulk
394 ABA DFPM -0.57 >More info -0.16 >More info control Original data GEO bulk
395 WT (Col-0) inflorescence well-watered day 10 0.59 >More info 0.14 >More info WT (Col-0) inflorescence well-watered day 0 Unopen flower buds Original data GEO bulk
396 rdr6-15 0.55 >More info 0.18 >More info Col-0 Original data GEO bulk
397 rosette leaves lcr 0.66 >More info 0.07 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
398 Uniconazole 12 h -0.55 >More info -0.17 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
399 BI-1-1h IAA 0.63 >More info 0.09 >More info BI-1-0h IAA whole plant Original data GEO bulk
400 Col PSTDC3000 24h -0.59 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
401 Mature roots -0.62 >More info -0.10 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
402 Truncated AC2 T2 0.64 >More info 0.08 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
403 Ibuprofen 3 h -0.62 >More info -0.10 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
404 Dark 2day ivd -0.71 >More info -0.01 >More info 0h ivd Original data
405 2d red light grown pif1pif3pif4pif5 (pifq) mutant -0.50 >More info -0.22 >More info 2d red light grown WT(Col-0) seedlings Original data GEO bulk
406 ppi2 -0.72 >More info -0.00 >More info WT whole plant Original data GEO bulk
407 Total RNA 35S:HF-RPL18 -0.70 >More info -0.02 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
408 ATR1 OE 0.63 >More info 0.09 >More info WT for ATR1/MYB51 Original data GEO bulk
409 seed freshly harvested H -0.62 >More info -0.10 >More info Control for tissue data seed Original data GEO bulk
410 Propiconazole 3 h -0.71 >More info -0.01 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
411 etiolated atbzip16 -0.58 >More info -0.14 >More info etiolated Ler etiolated aerial part of seedlings Original data GEO bulk
412 low CO2 + dark 0.50 >More info 0.22 >More info normal CO2 + light Original data GEO bulk
413 mkk1/mkk2 24h BTH rep -0.73 >More info 0.01 >More info Col-0 24h BTH rep Original data GEO bulk
414 WT (Col-0) inflorescence drought day 4 0.51 >More info 0.21 >More info WT (Col-0) inflorescence well-watered day 4 Unopen flower buds Original data GEO bulk
415 Drought Stress 24 h (root) 0.66 >More info 0.05 >More info Stress mock 24 h (root) Original data Stress treatments
416 24h SL Attim 17-1 1 0.56 >More info 0.15 >More info 0 h Attim 17-1 1 seed Original data
417 pnp1-1 1wk +P -0.54 >More info -0.17 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
418 coi1-16 ein2 sid2 ctrl 0.66 >More info 0.05 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
419 oas-a1.1 Cd 24h -0.61 >More info -0.10 >More info Cd 24h root Shoot Original data GEO bulk
420 smg7b-1 -0.64 >More info -0.07 >More info WT whole plant Original data GEO bulk
421 iron minus 24h -0.61 >More info -0.10 >More info iron +24h root Original data GEO bulk
422 ANAC102 knock-out low oxygen 0.58 >More info 0.13 >More info Col-0 low oxygen Original data GEO bulk
423 Te ozone -0.64 >More info -0.07 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
424 tcp14 0.52 >More info 0.19 >More info WT inflorescences Original data GEO bulk
425 dry seed 0 h -0.62 >More info -0.09 >More info Control for tissue data seed Original data GEO bulk
426 Col light-light EtOH -0.57 >More info -0.14 >More info Col light-light Mock 2.5% ethanol Original data GEO bulk
427 4C 6h 0.61 >More info 0.10 >More info 22C 3h Original data GEO bulk
428 WT Shoot Hypoxia -0.57 >More info -0.14 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
429 Col-0 DCA 48h -0.78 >More info 0.07 >More info Col-0 MOCK 48h Original data GEO bulk
430 35S:ATR1 like miR 0.20 >More info 0.51 >More info WT for miR Original data GEO bulk
431 CMP 4hr -0.66 >More info -0.04 >More info Acetone 4hr root Original data GEO bulk
432 root stele 40 mM NaCls -0.68 >More info -0.02 >More info root stele Original data GEO bulk
433 WT 3h -P -0.65 >More info -0.05 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
434 Col light-dark EtOH -0.66 >More info -0.04 >More info Col light-dark Mock 2.5% ethanol Original data GEO bulk
435 phyABDE Rc50 -0.54 >More info -0.16 >More info phyABDE Dark red light whole seedling Original data GEO bulk
436 Chitin 0.60 >More info 0.10 >More info Col C Original data GEO bulk
437 seed germinating in countinuous light 1 h SL -0.63 >More info -0.07 >More info Control for tissue data seed Original data GEO bulk
438 whole roots 140 mM NaCl 30 minutes -0.70 >More info -0.00 >More info whole roots standard Original data GEO bulk
439 atgsnor1-1 0.63 >More info 0.07 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
440 anac017-1 H2O2 3h 0.58 >More info 0.12 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
441 seedlings by volatiles from leafminer damaged
Lima bean 24h		 -0.64 >More info -0.06 >More info seedlings by volatiles from healthy Lima bean 24h leaves Original data GEO bulk
442 downy mildew cotyledons late stage -0.58 >More info -0.12 >More info mock inoculated Cotyledons Original data GEO bulk
443 C2 leaf-drought -0.63 >More info -0.07 >More info C2 leaf-well watered Original data GEO bulk
444 gai Control -0.60 >More info -0.10 >More info Laer Control leaf discs Original data GEO bulk
445 vte2 leaves 120h LT -0.74 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
446 camta1 root water 0.57 >More info 0.13 >More info Col-0 root water root Original data GEO bulk
447 PAHs stress -0.59 >More info -0.11 >More info exp control phenanthrene whole plants Original data GEO bulk
448 shoot control pSUC2 -0.59 >More info -0.11 >More info shoot control total Original data GEO bulk
449 Norflurazon -0.55 >More info -0.14 >More info Col-0 Original data GEO bulk
450 4C 2h(SOIL) 0.52 >More info 0.17 >More info 4C 0h(SOIL) Original data GEO bulk
451 WT chitooctaose -0.66 >More info -0.03 >More info WT water Original data GEO bulk
452 Norflurazon -0.55 >More info -0.14 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
453 msh1 albino -0.62 >More info -0.07 >More info WT aerial part Original data GEO bulk
454 WT polysome -0.63 >More info -0.06 >More info WT non-polysome Original data GEO bulk
455 tt4 0.50 >More info 0.19 >More info Col-0 aerial part Original data
456 08h Col-0 -0.61 >More info -0.08 >More info 00h Col-0 Original data GEO bulk
457 Laer GA 1h -0.62 >More info -0.07 >More info Laer Control leaf discs Original data GEO bulk
458 Atwrky63 0.68 >More info -0.00 >More info Col0 none leaf Original data GEO bulk
459 Col-0-1h IAA 0.65 >More info 0.03 >More info Col-0-0h IAA whole plant Original data GEO bulk
460 dde2-2 24hpi A. brassicicola -0.55 >More info -0.13 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
461 Col-0 mbs1-1 HL 3h -0.53 >More info -0.15 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
462 fls1-3 0.76 >More info -0.08 >More info Col-0 Rosette leaves Original data
463 Laer treat paclobutrazol (PAC) -0.56 >More info -0.12 >More info Laer Control leaf discs Original data GEO bulk
464 9 hr Hypoxia 1 hr recovery IP RNA -0.56 >More info -0.12 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
465 Col-0 RNAi-MBS2/mbs1-1 HL 3h -0.58 >More info -0.10 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
466 eif3h -0.61 >More info -0.07 >More info WT Original data GEO bulk
467 gun1gun5 Norflurazon -0.61 >More info -0.07 >More info Norflurazon a herbicide (Norflurazon) seedling Original data GEO bulk
468 embryo paclobutrazol -0.61 >More info -0.07 >More info embryo-control paclobutrazol embryo Original data GEO bulk
469 GA -0.70 >More info 0.02 >More info none GA Rosette Original data GEO bulk
470 4C 3h 0.61 >More info 0.07 >More info 22C 3h Original data GEO bulk
471 OXUPB1-2 elongation zone 0.58 >More info 0.10 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
472 ALC Toc1 light-dark Mock -0.50 >More info -0.17 >More info Col light-dark Mock no ethanol Original data GEO bulk
473 pericycle control -0.54 >More info -0.13 >More info Control for tissue data mock pericycle Original data GEO bulk
474 BI-1-30min IAA 0.63 >More info 0.04 >More info BI-1-0h IAA whole plant Original data GEO bulk
475 arr10 arr12 tZ 0.66 >More info 0.01 >More info tZ trans-zeatin roots Original data GEO bulk
476 ein2-PsmES4326-24hpi 0.66 >More info 0.01 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
477 WT Root-Pi -0.51 >More info -0.16 >More info WT Root+Pi roots Original data GEO bulk
478 (Ws-2)+100 uM As -0.62 >More info -0.05 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
479 Differentiation 36h 0.76 >More info -0.09 >More info Differentiation 0h leaves Original data
480 Rsch 3d 0.52 >More info 0.15 >More info Rsch CA Leaves Original data
481 WT leaves - Fe 0.55 >More info 0.12 >More info WT leaves + Fe Leaves Original data GEO bulk
482 pmr4-1 control -0.62 >More info -0.05 >More info WT control uninoculated Original data GEO bulk
483 agb1 +ABA GC 0.13 >More info 0.54 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
484 axr2 -0.57 >More info -0.10 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
485 shoots bhlh100/101 0uM Fe -0.61 >More info -0.06 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
486 seed during stratification 1 h S -0.60 >More info -0.07 >More info Control for tissue data seed Original data GEO bulk
487 Transgenic LEC2GR Seedling 1h Dex -0.50 >More info -0.16 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
488 Mutant axr3-1 -0.76 >More info 0.10 >More info Col Original data GEO bulk
489 elevated CO2 low Mg root -0.65 >More info -0.01 >More info atmospheric CO2 low Mg root Root Original data
490 epidermis control -0.54 >More info -0.12 >More info Control for tissue data mock epidermis Original data GEO bulk
491 rGRF3x35S:GIF 0.55 >More info 0.11 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
492 Truncated AC2 T1 0.61 >More info 0.05 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
493 12m.KNO3 0.52 >More info 0.14 >More info To. KNO3 14 day old Roots Original data GEO bulk
494 4tga safener 0.66 >More info -0.00 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
495 tumour 0.74 >More info -0.08 >More info non-tumor tumour Original data GEO bulk
496 eif3h polysome -0.52 >More info -0.14 >More info WT polysome Original data GEO bulk
497 gtl1 -0.67 >More info 0.01 >More info WT trichome Original data GEO bulk
498 Differentiation 48h 0.75 >More info -0.09 >More info Differentiation 0h leaves Original data
499 nas4x leaves + Fe 0.61 >More info 0.05 >More info WT leaves + Fe Leaves Original data GEO bulk
500 anac017-1 AntimycinA 3h 0.53 >More info 0.13 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
501 gtl1-1 -0.67 >More info 0.01 >More info WT trichome Original data GEO bulk
502 6h +Pi 0.56 >More info 0.10 >More info 6h -Pi root Original data GEO bulk
503 csn3-1 dark -0.56 >More info -0.10 >More info WT dark Original data GEO bulk
504 Col-0 +lincomycin 0.61 >More info 0.04 >More info Col-0 -lincomycin Original data GEO bulk
505 CT101 ozone -0.63 >More info -0.02 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
506 root hair -0.52 >More info -0.13 >More info Control for tissue data root hairs Original data GEO bulk
507 CMV-WT -0.52 >More info -0.13 >More info Mock-At Aerial tissues Original data GEO bulk
508 ms1 unpollinated -0.74 >More info 0.09 >More info WT 8h-pollinated pistil Original data GEO bulk
509 DC3000 2 h (leaf) -0.51 >More info -0.14 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
510 eds16 whole leaf 6hpi 0.55 >More info 0.10 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
511 35S:GIF 0.63 >More info 0.02 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
512 Rsch 8h 0.62 >More info 0.03 >More info Rsch CA Leaves Original data
513 Col ozone 2d -0.50 >More info -0.15 >More info Col clean-air 2d ozone Original data GEO bulk
514 pvip1 pvip2 seedling -0.63 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
515 cat2-2; harvested 8h continiously maintained in
high CO2;		 0.54 >More info 0.11 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
516 FOX line K19624 -0.62 >More info -0.03 >More info empty vector control (T3) FOX lines Original data GEO bulk
517 myb21 myb24 stage2 -0.55 >More info -0.10 >More info WT stage2 Original data GEO bulk
518 wnk8-2 untreated 0.54 >More info 0.11 >More info Col-0 untreated seedlings Original data GEO bulk
519 root callus inducing medium 24h 0.61 >More info 0.04 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
520 IMI 4mM -0.63 >More info -0.02 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
521 ahg1-1 -0.11 >More info -0.54 >More info ABA control Original data GEO bulk
522 Leafminer damaged seedlings 0.09 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
523 rosette leaves fdh 0.59 >More info 0.06 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
524 col-5 DC3000-avrRpm 4h -0.59 >More info -0.06 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
525 rosette leaves bdg 0.84 >More info -0.19 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
526 UV Stress 24 h (shoot) -0.64 >More info -0.00 >More info Stress mock 24 h (shoot) Original data Stress treatments
527 Octopus mutant DYG25 0.65 >More info -0.01 >More info WS Original data GEO bulk
528 cat2-short-day 2d -0.67 >More info 0.03 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
529 WT flg22 2h -0.52 >More info -0.12 >More info WT 0h Leaf tissue Original data GEO bulk
530 C58 35dpi 0.74 >More info -0.10 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
531 ga1-3 SCL3OE -0.51 >More info -0.13 >More info ga1-3 whole root Original data
532 RRE2 -0.50 >More info -0.14 >More info Col C Original data GEO bulk
533 siliques AtHb1 hypoxia -0.58 >More info -0.06 >More info siliques WT hypoxia hypoxia silique Original data GEO bulk
534 bak1-3 untreated -0.58 >More info -0.06 >More info WT untreated untreated Original data GEO bulk
535 sav1-1 light -0.58 >More info -0.06 >More info Col-0 light seedlings Original data GEO bulk
536 nia1nia2noa1-2 -0.58 >More info -0.06 >More info Col-0 whole seedlings Original data GEO bulk
537 wrky33 Bc inoculation 14h -0.56 >More info -0.07 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
538 Mutant siz1-3 -0.56 >More info -0.07 >More info Col-0 Original data GEO bulk
539 siz1-3 control -0.56 >More info -0.07 >More info Col-0 control Original data GEO bulk
540 Selenate (shoot) -0.52 >More info -0.11 >More info Ws (shoot) Original data GEO bulk
541 Te 8h 0.59 >More info 0.04 >More info Te CA Leaves Original data
542 ABA control -0.52 >More info -0.11 >More info No ABA control Original data GEO bulk
543 phr1 Root-Pi 0.50 >More info 0.13 >More info WT Root+Pi roots Original data GEO bulk
544 Laer Flg22+GA 2h -0.62 >More info -0.01 >More info Laer Control leaf discs Original data GEO bulk
545 dcl2-1 0.52 >More info 0.11 >More info Col-0 Original data GEO bulk
546 CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold 0.61 >More info 0.02 >More info CSP1 immonoprecipitated RNA 35S:HF-RPL18 12h cold (4C) rosettes Original data GEO bulk
547 GR:KAN1 DEX WL -0.62 >More info -0.01 >More info GR:KAN1 Mock WL seedlings Original data
548 C24 ozone -0.60 >More info -0.03 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
549 oxt6 mutant 0.50 >More info 0.13 >More info WT Original data GEO bulk
550 pollinated pop2-1 flowers 0.54 >More info 0.09 >More info pollinated WT flowers flowers Original data GEO bulk
551 Dark 2day hml -0.66 >More info 0.03 >More info 0h hml Original data
552 35:SUB1A -0.60 >More info -0.03 >More info WT whole seedling Original data GEO bulk
553 WT powdery mildew -0.51 >More info -0.12 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
554 Shoot Selenate -0.52 >More info -0.11 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
555 vte2 leaves 48h LT -0.54 >More info -0.09 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
556 differentiating xylem -0.55 >More info -0.07 >More info Control for tissue data xylem Original data GEO bulk
557 rid4 IBA 0.55 >More info 0.07 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
558 35S:RPS4 eds1-2 8h 0.56 >More info 0.06 >More info 35S:RPS4 8h leaves Original data
559 pab polysome -0.65 >More info 0.03 >More info WT polysome seedling shoot/aerial seedling Original data
560 Phytoprostane A1 4 h -0.63 >More info 0.01 >More info Col-0 Original data GEO bulk
561 root columella root cap -S -0.53 >More info -0.09 >More info root columella root cap pH5.7 Original data GEO bulk
562 overexpresser LBD38 in -N 0.58 >More info 0.04 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
563 AtNIGT1/HRS1 +CHX + DEX + Nitrate 0.50 >More info 0.12 >More info AtNIGT1/HRS1 +CHX - DEX + Nitrate Original data
564 elevated CO2 normal Mg root -0.58 >More info -0.04 >More info atmospheric CO2 normal Mg root Root Original data
565 smg5-2 -0.64 >More info 0.02 >More info WT whole plant Original data GEO bulk
566 oxt6:AtCPSF30 line -0.63 >More info 0.01 >More info oxt6 mutant Original data GEO bulk
567 QC -0.50 >More info -0.12 >More info Control for tissue data FACS-sorted protoplasts from roots Original data
568 GRX-overexpression seedlings control -0.52 >More info -0.10 >More info WT seedlings control Seedlings Original data GEO bulk
569 cys-c1 leaf 0.57 >More info 0.05 >More info Leaf-WT leaves Original data GEO bulk
570 pmr5 -0.60 >More info -0.02 >More info Col-0 Original data GEO bulk
571 QK HS -0.52 >More info -0.10 >More info QK control heat shocked seedling Original data GEO bulk
572 in vitro pollen tube -0.52 >More info -0.10 >More info Control for tissue data pollen tube Original data
573 Differentiation 24h 0.76 >More info -0.14 >More info Differentiation 0h leaves Original data
574 C24 UV1 0.59 >More info 0.03 >More info C24 mock UV seedling Original data
575 seedling SPL13 0.55 >More info 0.06 >More info seedling Col-0 Original data GEO bulk
576 WT mitomycin C -0.56 >More info -0.05 >More info WT mock shoot apical meristem Original data
577 seed during stratification 12 h S -0.55 >More info -0.06 >More info Control for tissue data seed Original data GEO bulk
578 msg2 -0.56 >More info -0.05 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
579 csn5 (csn5a-2 csn5b) dark -0.57 >More info -0.04 >More info WT dark Original data GEO bulk
580 8-DAC chr11-1chr17-1 -0.60 >More info -0.01 >More info 8-DAC Col-0 leaf explants Original data
581 QC pSCR 8h BL -0.58 >More info -0.03 >More info QC pSCR 0h BL brassinosteroid root Original data
582 entire vegetative rosette 0.58 >More info 0.03 >More info Col-0 Mock WL entire vegetative rosette Original data
583 pkl-1 -0.71 >More info 0.10 >More info WT whole seedling Original data GEO bulk
584 Dark 3day wt -0.66 >More info 0.06 >More info 0h wt Original data
585 HSP90 Reduced Salk hsp90.1 0.54 >More info 0.06 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
586 4C 7d 0.64 >More info -0.04 >More info 4C 0h Original data GEO bulk
587 irradiated leaf (cmt 5d) -0.59 >More info -0.01 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
588 seed germinating in countinuous light 6 h SL -0.51 >More info -0.09 >More info Control for tissue data seed Original data GEO bulk
589 Tsu-1 -Fe 48h -0.52 >More info -0.08 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
590 AtLysM RLK1 mutant chitooctaose 0.65 >More info -0.05 >More info WT chitooctaose Original data GEO bulk
591 Col dryseed -0.52 >More info -0.08 >More info Control for tissue data dry seeds Original data
592 L2.4 mutant -0.58 >More info -0.02 >More info Wt Original data GEO bulk
593 root - 04% oxygen - 2h 0.57 >More info 0.03 >More info root - 21% oxygen - 2h Original data GEO bulk
594 Tsu -Fe 48h Roots -0.52 >More info -0.08 >More info Tsu +Fe 24h Roots Original data GEO bulk
595 AhNAS2-RNAi Control -0.57 >More info -0.03 >More info WT Control Root Original data GEO bulk
596 mature endodermis glcal -0.55 >More info -0.04 >More info Control for tissue data endodermis Original data GEO bulk
597 Seeds stage8 w/o siliques -0.52 >More info -0.07 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
598 lug3 leaves 0.54 >More info 0.05 >More info WT-leaves matured rosette leaves Original data GEO bulk
599 brm-1 -0.55 >More info -0.04 >More info wt shoots Original data GEO bulk
600 Salt Stress 24 h (root) -0.54 >More info -0.05 >More info Stress mock 24 h (root) Original data Stress treatments
601 fus3-3 12 DAF Seed 0.50 >More info 0.09 >More info WT (Col-0) 12 DAF Seed-3 developing seeds dissected from sliques Original data
602 LTN008-2 aza-dc -0.57 >More info -0.02 >More info LTN012-2 Mock Original data
603 Cocultivation 8 hrs root -0.69 >More info 0.10 >More info Mock cocultivation 8 hrs root Root Original data
604 gun1-9 norflurazon -0.56 >More info -0.02 >More info gun1-9 control Original data GEO bulk
605 HairpinZ 4 h (leaf) -0.55 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
606 embryo ABA -0.51 >More info -0.07 >More info embryo-control ABA embryo Original data GEO bulk
607 Elevated CO2 leaf primordia -0.56 >More info -0.02 >More info Ambient CO2 leaf primordia leaf primordia Original data
608 aox1a:rpoTmp untreated -0.52 >More info -0.05 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
609 Polysomal RNA 35S:HF-RPL18 -0.54 >More info -0.03 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
610 cpr5 sim smr1 0.53 >More info 0.04 >More info WT seedling Original data GEO bulk
611 Leaf wounded -0.56 >More info -0.01 >More info Leaf control vegetative leaf Original data GEO bulk
612 Col-0 leaf drought -0.52 >More info -0.05 >More info Col-0 leaf water leaf Original data GEO bulk
613 G3P -0.52 >More info -0.05 >More info Mock distal leaves Original data GEO bulk
614 Col-0 0h NAA -0.69 >More info 0.12 >More info Col-0 6h MOCK Original data GEO bulk
615 Laer Flg22 2h -0.57 >More info -0.00 >More info Laer Control leaf discs Original data GEO bulk
616 GST-overexpression seedlings control -0.57 >More info -0.00 >More info WT seedlings control Seedlings Original data
617 root columella root cap 40 mM NaCl -0.55 >More info -0.01 >More info root columella root cap Original data GEO bulk
618 arr10 arr12 0.53 >More info 0.03 >More info DMSO--WT DMSO roots Original data GEO bulk
619 Dark 3day hml -0.66 >More info 0.10 >More info 0h hml Original data
620 Rsch 1d 0.51 >More info 0.05 >More info Rsch CA Leaves Original data
621 (Col-0)+200 uM As -0.53 >More info -0.03 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
622 P.syringae AvrRpt2 4 h (leaf) -0.55 >More info -0.01 >More info Mock 4 h (leaf) Original data Elicitor treatments
623 Te 3d 0.57 >More info -0.01 >More info Te CA Leaves Original data
624 Full AC2 T1 0.51 >More info 0.04 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
625 nd-1 V. longisporum-inoculated 48 hpi -0.51 >More info -0.04 >More info Col-0 V. longisporum-inoculated 48 hpi Pool of >50 individual roots Original data
626 psae1-3 stn7-1 0.54 >More info 0.01 >More info WS rosette leaves Original data GEO bulk
627 shoots WT 0uM Fe -0.67 >More info 0.12 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
628 sdg2 -0.52 >More info -0.03 >More info wt seedling Original data GEO bulk
629 Col-O low light -0.67 >More info 0.12 >More info Col-O bule light Original data GEO bulk
630 phloem sieve cells and companion cells -0.50 >More info -0.05 >More info Control for tissue data phloem Original data GEO bulk
631 A. thaliana-A. lyrata hybrid 0.52 >More info 0.03 >More info A. thaliana mature leaves before flowering Original data GEO bulk
632 gun1-1 -lincomycin 0.50 >More info 0.05 >More info Col-0 -lincomycin Original data GEO bulk
633 35S::CBF2 -0.51 >More info -0.04 >More info Ws2 Original data GEO bulk
634 WT 30μM arsenate 8 hours. -0.63 >More info 0.08 >More info WT control (not supplemented). Original data
635 cov1 cov2 stem Top 0.62 >More info -0.07 >More info WT stem Top stem Top Original data GEO bulk
636 Elevated CO2 LIMITING N NIGHT -0.60 >More info 0.05 >More info Elevated CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
637 amiR-ETP1/2 -0.60 >More info 0.05 >More info Col-0 air Original data GEO bulk
638 sni1 -0.60 >More info 0.05 >More info WT Original data GEO bulk
639 piffq 2d WL -0.57 >More info 0.02 >More info WT 2d WL whole seedling Original data GEO bulk
640 Mutant NahG(leaf) 0.60 >More info -0.05 >More info Col-0 (leaf) Original data GEO bulk
641 gul2-1 mutant -0.70 >More info 0.15 >More info WT 7 day-old whole seedlings Original data
642 pistil 8.0HAP 0.58 >More info -0.03 >More info unpollinated pistil pistil Original data GEO bulk
643 Kas -Fe 48h Shoots 0.53 >More info 0.01 >More info Kas +Fe 24h Shoots Original data GEO bulk
644 pad4-PsmES4326-24hpi 0.51 >More info 0.03 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
645 GA4 3 h (ga1 seed) -0.63 >More info 0.09 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
646 scrm-D -0.53 >More info -0.01 >More info Col-0 WT whole seedling Original data GEO bulk
647 gul2-1 bri1-5 mutant -0.63 >More info 0.09 >More info WT 7 day-old whole seedlings Original data
648 16h Col-0 -0.62 >More info 0.08 >More info 00h Col-0 Original data GEO bulk
649 P35S:rGRF3 -0.52 >More info -0.02 >More info WS Original data GEO bulk
650 WT (Col-0) inflorescence moderate drought day 5 0.59 >More info -0.05 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
651 mbd6 mutant thaliana 10-day-old seedling -0.56 >More info 0.03 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
652 Kas -Fe 24h Shoots 0.51 >More info 0.02 >More info Kas +Fe 24h Shoots Original data GEO bulk
653 ARR21C-ox -0.59 >More info 0.06 >More info Col-0 Original data ARR21C overexpression
654 Col ozone 3h -0.62 >More info 0.09 >More info Col clean-air 3h ozone Original data GEO bulk
655 CeO2 germinant 0.03 >More info -0.56 >More info Millipore Water germinant CeO2 seedling Original data
656 24h light (+Lincomycin) -0.58 >More info 0.05 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
657 HSP90 Reduced hsp90.2 0.51 >More info 0.01 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
658 Constans-mutant 0.61 >More info -0.09 >More info Col control above-ground whole plant Original data GEO bulk
659 penta Control -0.64 >More info 0.12 >More info Laer Control leaf discs Original data GEO bulk
660 WT (Ler) CK200 -0.51 >More info -0.01 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
661 upf3 -0.51 >More info -0.01 >More info WT whole plant Original data GEO bulk
662 Dark 2day wt -0.63 >More info 0.11 >More info 0h wt Original data
663 Col whole leaf 3dpi -0.61 >More info 0.09 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
664 short 12-degree- -0.02 >More info -0.50 >More info control short Original data GEO bulk
665 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 0.57 >More info -0.05 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
666 Elevated CO2 AMPLE N NIGHT -0.53 >More info 0.02 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
667 Te 1d 0.56 >More info -0.05 >More info Te CA Leaves Original data
668 root - 04% oxygen - 48h 0.60 >More info -0.09 >More info root - 21% oxygen - 48h Original data GEO bulk
669 AtGATA2ox -0.50 >More info -0.01 >More info Col seedling Original data GEO bulk
670 6m.KNO3 0.70 >More info -0.19 >More info To. KNO3 14 day old Roots Original data GEO bulk
671 xyl-grown cell culture- 1h 1mM Suc 0.00 >More info -0.51 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
672 cov1 cov2 stem Base -0.59 >More info 0.09 >More info WT stem Base stem Base Original data GEO bulk
673 erf5 erf6 +chitooctaose 0.50 >More info 0.00 >More info WT+chitooctaose chitooctaose seedlings Original data GEO bulk
674 S58-2 -0.52 >More info 0.02 >More info wt Original data GEO bulk
675 HSP90 Reduced RNAi-A1 -0.54 >More info 0.04 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
676 9 hr Hypoxia 1 hr recovery Total RNA -0.55 >More info 0.05 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
677 COL-0-Fe--root -0.51 >More info 0.01 >More info COL-0-Ctrl--root root Original data
678 Stem wox4 0.50 >More info 0.00 >More info Stem Col first internode of stem Original data GEO bulk
679 bak1-3 +Pep2 10h -0.58 >More info 0.08 >More info WT +Pep2 10h Pep2 Original data GEO bulk
680 phyB Rc50 -0.56 >More info 0.07 >More info WT(Ler) Rc50 Original data GEO bulk
681 (Col-0)+100 uM As -0.53 >More info 0.04 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
682 columella control -0.53 >More info 0.04 >More info Control for tissue data mock columella Original data GEO bulk
683 Col whole leaf 5dpi -0.53 >More info 0.04 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
684 tbf1-SA 0.60 >More info -0.11 >More info WT-SA 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
685 hira-root 0.51 >More info -0.02 >More info WT-root root Original data
686 WT Seedling BL+ABA -0.65 >More info 0.16 >More info WT Seedling BL Original data GEO bulk
687 Col-0 9 hpi A. brassicicola -0.50 >More info 0.01 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
688 atmyc2 Seedling Dark 0.61 >More info -0.12 >More info WT Seedling Dark Original data GEO bulk
689 root - 01% oxygen - 30min 0.63 >More info -0.14 >More info root - 21% oxygen - 30min Original data GEO bulk
690 dyt1 -0.52 >More info 0.04 >More info WT anther Original data GEO bulk
691 Aerobic prt6 0.68 >More info -0.20 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
692 inhibitor B Treated -0.66 >More info 0.18 >More info Negative Control Original data GEO bulk
693 seedlings-week-old RECA1-overexpressing
transgenic		 -0.61 >More info 0.13 >More info seedlings-week-old Col-0 seedlings Original data
694 AFB1 0h -0.63 >More info 0.15 >More info WT 0h Leaf tissue Original data GEO bulk
695 Differentiation 12h 0.68 >More info -0.21 >More info Differentiation 0h leaves Original data
696 gai Flg22 1h -0.56 >More info 0.09 >More info Laer Flg22 1h leaf discs Original data GEO bulk
697 Col-0 Flg22 4h -0.54 >More info 0.07 >More info Col-0 H2O 4h Original data GEO bulk
698 35S::ERF104 H2O 4h -0.52 >More info 0.05 >More info Col-0 H2O 4h Original data GEO bulk
699 SA Treated -0.55 >More info 0.08 >More info Water Original data GEO bulk
700 fil-8 yab3-2 -0.51 >More info 0.04 >More info wt Apices Original data GEO bulk
701 2hr continuous KCl and MSX control PeR cell 0.51 >More info -0.04 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
702 plant (Col-0) 4h phytoprostane A1 -0.52 >More info 0.05 >More info plant (tga2-5-6) 4h control Original data GEO bulk
703 dcl3-1 0.59 >More info -0.12 >More info Col-0 Original data GEO bulk
704 ex1ex2flu dark 8hours/30 minute light 0.56 >More info -0.10 >More info col dark 8hours/30 minute light Original data GEO bulk
705 seedling 12h after Gamma atm-1 -0.50 >More info 0.04 >More info seedling day 1 unirradiated atm-1 12h Original data
706 pmr5 pmr6 -0.50 >More info 0.04 >More info Col-0 Original data GEO bulk
707 dcl1-7 -0.54 >More info 0.08 >More info Ler Original data GEO bulk
708 SA -0.61 >More info 0.15 >More info WT mock Whole seedling Original data GEO bulk
709 root - 01% oxygen - 2h 0.57 >More info -0.11 >More info root - 21% oxygen - 2h Original data GEO bulk
710 iae1 0.63 >More info -0.17 >More info B179 Original data GEO bulk
711 6m.KCl 0.67 >More info -0.22 >More info To. KCl 14 day old Roots Original data GEO bulk
712 WT-NOCO2 INFECTED -0.51 >More info 0.06 >More info WT-MOCK Original data GEO bulk
713 R. solani AG8 -0.63 >More info 0.18 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
714 Shoot apex inflorescence (after bolting) -0.20 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
715 line J1551-5 days control + 2 days salt s -0.57 >More info 0.12 >More info line J1551-7 days-control Original data
716 arf2 brz 0.57 >More info -0.12 >More info arf2 mock Original data GEO bulk
717 Aerobic e1 ate2 0.53 >More info -0.09 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
718 Atss3 Light4 0.52 >More info -0.08 >More info Atss3 Dark0.5 Original data GEO bulk
719 fil-8 yab3-2 yab5-1 -0.50 >More info 0.06 >More info wt Apices Original data GEO bulk
720 TNT-seedlings -0.72 >More info 0.28 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
721 seedling 12h after HZE WT -0.53 >More info 0.10 >More info seedling day 1 unirradiated WT 12h Original data
722 35S::Zat12+H2O2 -0.56 >More info 0.13 >More info WT+H2O2 H2O2 Original data GEO bulk
723 D2O -0.54 >More info 0.11 >More info H2O seedling Original data GEO bulk
724 mp-B4149 mutant IAA -0.54 >More info 0.11 >More info GR-bdl IAA Original data GEO bulk
725 20h Col-0 -0.51 >More info 0.08 >More info 00h Col-0 Original data GEO bulk
726 gun5 norflurazon -0.61 >More info 0.18 >More info gun5 control Original data GEO bulk
727 arf2 mock -0.68 >More info 0.26 >More info Col mock Original data GEO bulk
728 vte2-1 3d vernalization -0.52 >More info 0.10 >More info WT 3d vernalization Original data GEO bulk
729 Mutant arf2 (etiol) -0.68 >More info 0.26 >More info Col (etiol) Original data GEO bulk
730 CCA1-ox 6am non-polysomal -0.09 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
731 GST 4 h (leaf) -0.57 >More info 0.15 >More info Mock 4 h (leaf) Original data Elicitor treatments
732 seedling 6h after HZE WT -0.52 >More info 0.12 >More info seedling day 1 unirradiated WT 6h Original data
733 2hr transitory KNO3 PeR cell 0.53 >More info -0.13 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
734 ms35 silique stage 5 0.52 >More info -0.12 >More info Ler .5 anther and filament Original data GEO bulk
735 35S::IaTCP -0.50 >More info 0.10 >More info thaliana control secondary inflorescence Original data
736 OsSAP11 expressing 0.54 >More info -0.14 >More info WT seedlings Original data GEO bulk
737 slr-1 0h NAA 0.56 >More info -0.16 >More info Col-0 0h NAA Original data GEO bulk
738 seedling -S Exp -0.63 >More info 0.23 >More info seedling FN Exp seedling Original data
739 Protoplast Induced -0.55 >More info 0.15 >More info Uninduced Original data GEO bulk
740 noa1-2 -0.57 >More info 0.17 >More info Col-0 whole seedlings Original data GEO bulk
741 cys-c1 root 0.56 >More info -0.17 >More info Root-WT roots Original data GEO bulk
742 root hypoxia pSUC2 -0.53 >More info 0.14 >More info root hypoxia total hypoxia root Original data GEO bulk
743 Control KNO3 roots - 8hours 0.52 >More info -0.13 >More info Control KCl roots - 8hours 5mM KNO3 on both sides for 8 hours roots Original data GEO bulk
744 WT 2-4h Xanthomonas -0.60 >More info 0.21 >More info WT T0 Original data GEO bulk
745 sng1 UV -0.62 >More info 0.23 >More info UV aerial region Original data GEO bulk
746 t-zeatin 1 h 0.54 >More info -0.15 >More info Mock 1 h Original data Basic hormone treatment of seedlings
747 C2H2 ZF TDNA mutant 0.53 >More info -0.14 >More info Col-WT mature pollen Original data GEO bulk
748 Col-0 C2H4 24h -0.52 >More info 0.13 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
749 ACN1-2 Sucrose 0.51 >More info -0.13 >More info Col-7 Sucrose Original data GEO bulk
750 pad4-est1b-1-doublemutant -0.57 >More info 0.19 >More info pad4-mutant developed rosette leaves Original data GEO bulk
751 Mutant ag-12(flower) -0.51 >More info 0.14 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
752 protoplasts T2 [flg22] -0.57 >More info 0.20 >More info protoplasts T2 [CPK] mesophyll protoplasts Original data GEO bulk
753 Roots Cd 0.67 >More info -0.31 >More info Roots control Cd Root Original data GEO bulk
754 3m.KNO3 0.66 >More info -0.30 >More info To. KNO3 14 day old Roots Original data GEO bulk
755 3m.KCl 0.58 >More info -0.22 >More info To. KCl 14 day old Roots Original data GEO bulk
756 etr1 1% sucrose 12-day-old 0.61 >More info -0.25 >More info Col-0 1% sucrose 12-day-old Original data GEO bulk
757 35S::CYC -0.51 >More info 0.15 >More info thaliana control secondary inflorescence Original data
758 tt4 UV -0.59 >More info 0.23 >More info UV aerial region Original data GEO bulk
759 tcp13/+ tcp14/+ -0.61 >More info 0.26 >More info WT inflorescences Original data GEO bulk
760 5-Triiodobenzoic acid3 h -0.51 >More info 0.16 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
761 protoplasts T0 [flg22] -0.50 >More info 0.16 >More info protoplasts T0 [CPK] mesophyll protoplasts Original data GEO bulk
762 sid2-avrB-6h -0.51 >More info 0.18 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
763 Paclobutrazol 3 h -0.54 >More info 0.22 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
764 IAA/inhibitor B Treated -0.51 >More info 0.19 >More info IAA Treated Original data GEO bulk
765 JA 24h 0.63 >More info -0.31 >More info EtOH 24h 24hr Original data GEO bulk
766 gpa1-4/agb1-2 ozone 2d -0.25 >More info 0.57 >More info Col ozone 2d ozone Original data GEO bulk
767 toc1-1-57hr -0.54 >More info 0.23 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
768 Naphthyl- phthalamic acid 3 h -0.53 >More info 0.23 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
769 pGL1::GL1-GR Dex 24hours -0.23 >More info 0.51 >More info pGL1::GL1-GR mock 24hours Original data GEO bulk
770 pab nonpolysome -0.52 >More info 0.25 >More info WT nonpolysome seedling shoot/aerial seedling Original data
771 arp6-10 12 ºC -0.61 >More info 0.36 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
772 root - 04% oxygen - 30min 0.62 >More info -0.38 >More info root - 21% oxygen - 30min Original data GEO bulk
773 FLIGHT TAGESB plate6 SHOOTS -0.58 >More info 0.35 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
774 NaCl cpctry -0.54 >More info 0.32 >More info NaCl Col Original data GEO bulk
775 AgNO3 3 h -0.53 >More info 0.31 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
776 seed germinating in countinuous light 24h SL -0.46 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
777 ARR22-ox -0.68 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
778 upb1-1 elongation zone 0.52 >More info -0.36 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
779 siliques AtHb1 control -0.37 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
780 bri1-116 -0.60 >More info 0.73 >More info Col seedling Original data GEO bulk
781 shoot hypoxia p35S 0.51 >More info -0.60 >More info shoot hypoxia total Original data GEO bulk
782 toc1-1-77hr -0.50 >More info 0.42 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
783 Col0-PsmES4326-24hpi -0.55 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
784 Heat shock optimum -0.60 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
785 P.syringae vir 4 h (leaf) -0.51 >More info 0.46 >More info Mock 4 h (leaf) Original data Elicitor treatments