4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 6m.KCl
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List of experiments correlated with "6m.KCl"  Help Download transcriptome of top 30
Score Experiment Correlation from
6m.KCl		 Correlation to
6m.KCl		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 6m.KCl 1.00 >More info 1.00 >More info To. KCl 14 day old Roots Original data GEO bulk
2 6m.KNO3 0.93 >More info 0.94 >More info To. KNO3 14 day old Roots Original data GEO bulk
3 3m.KCl 0.91 >More info 0.92 >More info To. KCl 14 day old Roots Original data GEO bulk
4 3m.KNO3 0.90 >More info 0.91 >More info To. KNO3 14 day old Roots Original data GEO bulk
5 cngc19 -0.76 >More info -0.64 >More info Col-0 root Original data GEO bulk
6 2hr transitory KNO3 PeR cell 0.65 >More info 0.69 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
7 12m.KCl 0.64 >More info 0.66 >More info To. KCl 14 day old Roots Original data GEO bulk
8 sfr3 cold 0.65 >More info 0.64 >More info WT-cold aerial tissues Original data GEO bulk
9 2hr transitory KNO3 SR cell 0.63 >More info 0.60 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
10 Prohexadione 3 h 0.52 >More info 0.68 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
11 OXUPB1-2 meristematic zone 0.63 >More info 0.57 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
12 triplod male excess -0.59 >More info -0.60 >More info tetraploid Original data GEO bulk
13 phr1 Shoot-Pi 0.55 >More info 0.63 >More info WT Root-Pi shoots Original data GEO bulk
14 rrd2 IBA 0.60 >More info 0.57 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
15 Dex-rga(delta17) 2h GA4 0.56 >More info 0.59 >More info Vector 4h GA4 shoots Original data GEO bulk
16 Red/FR Light45min -0.40 >More info -0.75 >More info FarRed Light 45min Original data Light treatments
17 15m.KNO3 0.52 >More info 0.62 >More info To. KNO3 14 day old Roots Original data GEO bulk
18 SAM SE agl15 agl18 double mutant 0.57 >More info 0.57 >More info SAM SE Col Original data GEO bulk
19 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark 0.60 >More info 0.52 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hMockDark 2 h mock dark seedling Original data
20 phr1 phl1 Root-Pi -0.40 >More info -0.72 >More info WT Shoot+Pi roots Original data GEO bulk
21 Dex-rga(delta17) 4h GA4 0.53 >More info 0.58 >More info Vector 4h GA4 shoots Original data GEO bulk
22 Control KNO3 roots - 8hours 0.61 >More info 0.49 >More info Control KCl roots - 8hours 5mM KNO3 on both sides for 8 hours roots Original data GEO bulk
23 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight 0.59 >More info 0.51 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
24 tbf1-mock spray 0.56 >More info 0.54 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
25 cngc1-3 -0.69 >More info -0.41 >More info Col-0 root Original data GEO bulk
26 intact root control -0.45 >More info -0.64 >More info Control for tissue data mock whole root Original data GEO bulk
27 2hr KCl control SR cell 0.57 >More info 0.52 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
28 NaCl scm -0.51 >More info -0.58 >More info NaCl Col Original data GEO bulk
29 Indigo Carmine 0.5 uM 0.47 >More info 0.62 >More info Control MV and IC Indigo Carmine Original data
30 bri1-116 0.35 >More info 0.73 >More info Col seedling Original data GEO bulk
31 Norflurazon -0.51 >More info -0.56 >More info Col-0 Original data GEO bulk
32 Norflurazon -0.51 >More info -0.56 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
33 GA 120min 0.57 >More info 0.50 >More info CON120 GA 120 min. root tips Original data GEO bulk
34 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 0.59 >More info 0.47 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
35 afb3-1 2h KNO3 0.52 >More info 0.53 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
36 ara1/2mut -0.56 >More info -0.48 >More info Col-3 Original data GEO bulk
37 root cells endodermis and quiescent center -Fe 0.56 >More info 0.48 >More info whole roots standard Original data GEO bulk
38 nNOS-drought 0.56 >More info 0.48 >More info WT-drought leaf Original data
39 arp6-10 12 ºC -0.54 >More info -0.49 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
40 iron minus 0 h 0.48 >More info 0.55 >More info iron +0 h root Original data GEO bulk
41 vtc2 day 7 induction -0.48 >More info -0.55 >More info WT day 7 induction day 7 induction of somatic embryogenesis Original data GEO bulk
42 epidermis control -0.41 >More info -0.62 >More info Control for tissue data mock epidermis Original data GEO bulk
43 bam7 untreated -0.35 >More info -0.68 >More info WT untreated none shoot Original data
44 K starvation (root) 0.50 >More info 0.52 >More info Ws (root) Original data GEO bulk
45 Root -K 0.50 >More info 0.52 >More info Control-root Original data GEO bulk
46 ga1-3 1h GA4 0.55 >More info 0.47 >More info ga1-3 1h water shoots Original data GEO bulk
47 20m.KCl 0.43 >More info 0.58 >More info To. KCl 14 day old Roots Original data GEO bulk
48 Ts5 roots 2hr KNO3 nitrogen 0.51 >More info 0.48 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
49 QC -0.39 >More info -0.60 >More info Control for tissue data FACS-sorted protoplasts from roots Original data
50 miR 0h -0.43 >More info -0.55 >More info Col 0h Leaf Original data GEO bulk
51 sng1 -0.39 >More info -0.59 >More info WT aerial region Original data GEO bulk
52 NFA8 roots 2hr KNO3 nitrogen 0.56 >More info 0.40 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
53 HSP90 Reduced RNAi-B1 -0.51 >More info -0.45 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
54 IAA7mII over-expressor IAA Treated 0.27 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
55 -Sulfate 24 h 0.71 >More info 0.24 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
56 Col-0 low oxygen -0.40 >More info -0.54 >More info Col-0 Original data GEO bulk
57 roots bhlh100/101 100uM Fe -0.39 >More info -0.55 >More info roots WT 100uM Fe 100uM Fe roots Original data GEO bulk
58 pericycle control -0.38 >More info -0.56 >More info Control for tissue data mock pericycle Original data GEO bulk
59 Imbibed 24 h ABA 3uM (seed) 0.51 >More info 0.42 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
60 35S::ERF104 H2O 4h -0.51 >More info -0.42 >More info Col-0 H2O 4h Original data GEO bulk
61 AFB1 0h -0.53 >More info -0.39 >More info Col 0h Leaf Original data GEO bulk
62 gapcp1gapcp2 ABA 0.40 >More info 0.52 >More info WT ABA ABA seedling Original data GEO bulk
63 dark +lincomycin 0.40 >More info 0.52 >More info dark -lincomycin Original data GEO bulk
64 fri-flc -0.57 >More info -0.35 >More info WT Original data GEO bulk
65 ACC 0.5 h 0.51 >More info 0.41 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
66 Mature roots -0.32 >More info -0.60 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
67 Mutant arf19-1 -0.35 >More info -0.57 >More info Col Original data GEO bulk
68 Callus -0.34 >More info -0.58 >More info Control for tissue data callus Original data GEO bulk
69 Daminozide 3 h 0.52 >More info 0.39 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
70 root cortex 40 mM NaCl 0.54 >More info 0.36 >More info root cortex Original data GEO bulk
71 WT-16ºC -0.37 >More info -0.52 >More info WT-23ºC Original data GEO bulk
72 root - 08% oxygen - 30min -0.21 >More info -0.67 >More info root - 21% oxygen - 30min Original data GEO bulk
73 2hr continuous KNO3 PeR cell 0.26 >More info 0.62 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
74 2h KNO3 Whole root -0.69 >More info -0.19 >More info 2h KCl control Whole root Whole root Original data GEO bulk
75 cat2-2; 8h switch to ambient CO2 concentrations; -0.31 >More info -0.57 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
76 L2.4 mutant 0.37 >More info 0.50 >More info Wt Original data GEO bulk
77 aerial organ callus inducing medium 96 h -0.37 >More info -0.50 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
78 2hr continuous KNO3 and MSX and Gln PeR cell 0.53 >More info 0.33 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
79 Hydrogen Peroxide 500 uM -0.53 >More info -0.33 >More info Control RB and PER Hydrogen Peroxide Original data
80 cop1 Seedling Dark 0.35 >More info 0.51 >More info WT Seedling Dark Original data GEO bulk
81 WT Atum 1h -0.29 >More info -0.56 >More info WT 0h Leaf tissue Original data GEO bulk
82 non-polysome mRNA eif3k -0.29 >More info -0.56 >More info non-polysome mRNA WT aerial part Original data GEO bulk
83 arp6-10 2h 27 -degree-C -0.50 >More info -0.34 >More info Col-0 2h at 27 ºC whole seedlings Original data GEO bulk
84 2hr continuous KNO3 LRCR cell 0.50 >More info 0.34 >More info 2hr KCl control LRCR cell Lateral Root Cap root cells Original data GEO bulk
85 G3P -0.19 >More info -0.65 >More info Mock distal leaves Original data GEO bulk
86 2hr transitory KNO3 EPR cell 0.32 >More info 0.52 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
87 Seedling KUA1-IOX est -0.10 >More info -0.74 >More info Seedling KUA1-IOX mock Original data
88 tbf1-SA 0.51 >More info 0.32 >More info WT-SA 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
89 mutant-line409 0.32 >More info 0.51 >More info WT-control whole plant Original data GEO bulk
90 spx1 spx2 no Pi 0.52 >More info 0.30 >More info WT no Pi seedlings Original data
91 Uniconazole 3 h -0.20 >More info -0.62 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
92 M6PR transgenic leaf 100mM NaCl 0.50 >More info 0.31 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
93 35S::HRE1 Aerobic -0.51 >More info -0.29 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
94 oxt6:AtCPSF30 line -0.50 >More info -0.27 >More info oxt6 mutant Original data GEO bulk
95 seed germinating in countinuous light 48 h SL -0.24 >More info -0.53 >More info Control for tissue data seed Original data GEO bulk
96 Prohexadione 12 h 0.50 >More info 0.26 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
97 NAA +AA 0.19 >More info 0.57 >More info NAA -AA B5 media supplemented with 4.5 µM NAA and treated with AA Original data
98 IPT8 mutant tZ 24h -0.56 >More info -0.19 >More info Control 24h 24 hours primary root tip (5 mm) Original data GEO bulk
99 Nicotinamide-77hr 0.52 >More info 0.22 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
100 CsUBC13-OE-es 0.54 >More info 0.20 >More info Col-es root Original data GEO bulk
101 spx1 spx2 resupplied Pi 4h 0.50 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
102 WT Shoot Hypoxia -0.12 >More info -0.62 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
103 OE-HRA1 2HS  0.51 >More info 0.22 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
104 sfr6 drought -0.19 >More info -0.53 >More info WT drought All aerial tissue Original data GEO bulk
105 phloem sieve cells and companion cells -0.20 >More info -0.51 >More info Control for tissue data phloem Original data GEO bulk
106 cortex -0.18 >More info -0.53 >More info Control for tissue data cortex Original data GEO bulk
107 Laer pretreat GA Flg22 1h 0.00 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
108 DUO1 induced 12h 0.21 >More info 0.50 >More info 12hr-not-induced whole plant Original data GEO bulk
109 AGL24 induced 0.19 >More info 0.52 >More info WT-ESTRADIOL Original data GEO bulk
110 SQ8 roots 2hr KCl control 0.52 >More info 0.18 >More info Col0 roots 2hr KCl control root Original data GEO bulk
111 Light 0.5h steady-state -0.15 >More info -0.54 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
112 CsUBC13-OE -Fe -0.18 >More info -0.51 >More info Col -Fe root Original data GEO bulk
113 MPK6 ox Shoot Hypoxia -0.10 >More info -0.58 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
114 Section Root from70 mm to 340 mm harvested
immediately		 -0.12 >More info -0.55 >More info Control for tissue data Original data GEO bulk
115 elf3-7-23ºC -0.16 >More info -0.50 >More info WT-23ºC Original data GEO bulk
116 irradiated leaf (WT 5d) 0.13 >More info 0.52 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
117 Regenerating Stump Root Tip Cut 130 mm andn Recut
13 hrs Taking 70 mm of Stump (4dpg)		 -0.10 >More info -0.55 >More info Control for tissue data Original data GEO bulk
118 root hair -0.14 >More info -0.50 >More info Control for tissue data root hairs Original data GEO bulk
119 chl1-5 Nitrate 0.5h 0.08 >More info 0.55 >More info WT Nitrate 0.5h Original data GEO bulk
120 Regenerating Stump Root Tip Cut 130 mm andn Recut
5 hrs Taking 70 mm of Stump (4dpg)		 -0.09 >More info -0.54 >More info Control for tissue data Original data GEO bulk
121 vtc1-1 0.01 >More info 0.61 >More info Col-0 whole plant Original data GEO bulk
122 Paclobutrazol 3 h -0.08 >More info -0.53 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
123 vte2 leaves 0h LT 0.07 >More info 0.53 >More info Col leaves 0h LT h 9-11th adult leaves Original data
124 Aerobic prt6 -0.08 >More info -0.52 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
125 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (8 dpg)		 -0.07 >More info -0.52 >More info Control for tissue data Original data GEO bulk
126 root - 04% oxygen - 2h -0.02 >More info -0.56 >More info root - 21% oxygen - 2h Original data GEO bulk
127 Root from tip to 130 mm proximal to tip (cut
8dpg)		 -0.06 >More info -0.52 >More info Control for tissue data Original data GEO bulk
128 Shoot apex inflorescence (after bolting) -0.08 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
129 Regenerating Stump Root Tip Cut 130 mm andn Recut
22 hrs Taking 70 mm of Stump (4dpg)		 -0.04 >More info -0.53 >More info Control for tissue data Original data GEO bulk
130 Leafminer damaged seedlings -0.01 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
131 abh1 -ABA -0.04 >More info -0.50 >More info Col-0 -ABA Original data GEO bulk
132 Root from tip to 130 mm proximal to tip (cut
4dpg)		 -0.02 >More info -0.52 >More info Control for tissue data Original data GEO bulk
133 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
134 Col0-PsmES4326-24hpi -0.10 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
135 DUO1 induced 6h 0.01 >More info 0.50 >More info 6hr-not-induced whole plant Original data GEO bulk
136 HSP90 Reduced Salk hsp90.3 0.51 >More info -0.01 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
137 root - 08% oxygen - 48h 0.05 >More info -0.55 >More info root - 21% oxygen - 48h Original data GEO bulk
138 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (4dpg)		 0.04 >More info -0.53 >More info Control for tissue data Original data GEO bulk
139 Col-0 24hpi A. brassicicola -0.50 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
140 Light 0.5h polysome-bound 0.12 >More info -0.59 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
141 FarRed Light 45min -0.22 >More info 0.67 >More info White Light 45min Original data Light treatments
142 shoot hypoxia p35S 0.08 >More info -0.52 >More info shoot hypoxia total Original data GEO bulk
143 Col BTH -0.24 >More info 0.67 >More info Col rosettes Original data GEO bulk
144 seed germinating in countinuous light 24h SL -0.25 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
145 Red Light 45min -0.51 >More info 0.16 >More info White Light 45min Original data Light treatments
146 Heat shock optimum -0.36 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
147 siliques AtHb1 control -0.29 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk