4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on arp6-10 12 ºC
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with " arp6-10 12 ºC"  Help Download transcriptome of top 30
Score Experiment Correlation from
arp6-10 12 ºC		 Correlation to
arp6-10 12 ºC		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 arp6-10 12 ºC 1.00 >More info 1.00 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
2 arp6-10 2h 27 -degree-C 0.87 >More info 0.85 >More info Col-0 2h at 27 ºC whole seedlings Original data GEO bulk
3 dark +H2O2 0.77 >More info 0.79 >More info dark 5 mM H2O2 seedling Original data GEO bulk
4 rrd2 IBA -0.79 >More info -0.77 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
5 SAM SE agl15 agl18 double mutant -0.78 >More info -0.74 >More info SAM SE Col Original data GEO bulk
6 arp6-10 24h at 27 ºC 0.74 >More info 0.78 >More info Col-0 24h at 27 ºC whole seedlings Original data GEO bulk
7 agb1 gpa1 -ABA LF -0.73 >More info -0.77 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
8 atmyc2 Seedling Dark -0.73 >More info -0.73 >More info WT Seedling Dark Original data GEO bulk
9 gpa1 -ABA LF -0.68 >More info -0.77 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
10 bHLH122 ox 0.73 >More info 0.71 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
11 agb1 -ABA LF -0.67 >More info -0.74 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
12 Nicotinamide-77hr -0.74 >More info -0.66 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
13 bri1-5 mutant 0.73 >More info 0.62 >More info WT 7 day-old whole seedlings Original data
14 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark -0.67 >More info -0.68 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hMockDark 2 h mock dark seedling Original data
15 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight -0.65 >More info -0.69 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
16 KCl germinant -0.74 >More info -0.59 >More info Millipore Water germinant KCl seedling Original data
17 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 -0.63 >More info -0.66 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
18 roottip hypoxia pSCR 0.60 >More info 0.69 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
19 root - 08% oxygen - 2h -0.65 >More info -0.63 >More info root - 21% oxygen - 2h Original data GEO bulk
20 tbf1-SA -0.69 >More info -0.58 >More info WT-SA 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
21 Col-0 +ABA LF -0.69 >More info -0.55 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
22 Nicotinamide-69hr -0.67 >More info -0.56 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
23 atmyc2 Seedling BL 0.72 >More info 0.50 >More info WT Seedling BL Original data GEO bulk
24 46T-Dry 0.73 >More info 0.48 >More info WT-Dry dehydration treatment 1h Original data
25 nNOS-drought -0.65 >More info -0.55 >More info WT-drought leaf Original data
26 miR 0h 0.57 >More info 0.63 >More info Col 0h Leaf Original data GEO bulk
27 roottip hypoxia pSHR 0.61 >More info 0.59 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
28 atmyc2 Seedling BL+ABA 0.68 >More info 0.50 >More info WT Seedling BL+ABA Original data GEO bulk
29 oxt6:AtCPSF30 line 0.63 >More info 0.55 >More info oxt6 mutant Original data GEO bulk
30 embryo proper linear-cotyledon 0.58 >More info 0.60 >More info whole seeds linear-cotyledon Original data GEO bulk
31 PNO8 12 h -0.52 >More info -0.64 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
32 3m.KCl -0.59 >More info -0.57 >More info To. KCl 14 day old Roots Original data GEO bulk
33 ABA JA 24h -0.57 >More info -0.59 >More info EtOH 24h 24hr Original data GEO bulk
34 Nicotinamide-85hr -0.69 >More info -0.46 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
35 WT Shoot-Pi -0.68 >More info -0.47 >More info WT Shoot+Pi shoots Original data GEO bulk
36 sfr6 drought 0.51 >More info 0.63 >More info WT drought All aerial tissue Original data GEO bulk
37 3m.KNO3 -0.55 >More info -0.59 >More info To. KNO3 14 day old Roots Original data GEO bulk
38 msg2 0.65 >More info 0.49 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
39 axr2 0.73 >More info 0.41 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
40 msh1 recA3 untreated 0.71 >More info 0.43 >More info WT untreated above-ground parts Original data GEO bulk
41 35:SUB1C -0.64 >More info -0.49 >More info WT whole seedling Original data GEO bulk
42 Fenclorim 24hr -0.70 >More info -0.43 >More info Acetone 24hr root Original data GEO bulk
43 46T-CK 0.73 >More info 0.40 >More info WT-CK none Original data
44 nNOS-control -0.57 >More info -0.55 >More info WT-control leaf Original data
45 OE-HRA1 NS  -0.72 >More info -0.40 >More info Col-0NS 2 h non-stress (2NS) 7-day-old seedlings Original data
46 SCR 72hr-S 0.56 >More info 0.56 >More info SCR 0hr endodermis Original data
47 SCR 96hr-S 0.56 >More info 0.56 >More info SCR 0hr endodermis Original data
48 atmyc2 cop1 Seedling BL 0.64 >More info 0.48 >More info WT Seedling BL Original data GEO bulk
49 SCR 48hr-S 0.55 >More info 0.56 >More info SCR 0hr endodermis Original data
50 tunicamycin 0.64 >More info 0.47 >More info DMF Original data GEO bulk
51 roottip control pSHR 0.55 >More info 0.55 >More info roottip control total control roottip Original data GEO bulk
52 des1.1 -0.67 >More info -0.43 >More info Leaves-WT leaf Original data GEO bulk
53 Nicotinamide-53hr -0.70 >More info -0.39 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
54 root stele -S 0.53 >More info 0.55 >More info root stele pH5.7 Original data GEO bulk
55 toc1-1-69hr 0.51 >More info 0.56 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
56 mkk1 24h BTH rep -0.38 >More info -0.69 >More info Col-0 24h BTH rep Original data GEO bulk
57 cat2-2; 8h switch to ambient CO2 concentrations; 0.56 >More info 0.50 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
58 Nicotinamide-89hr -0.64 >More info -0.42 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
59 root longitudinal zone-1 low sulfur 0.56 >More info 0.50 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
60 toc1-1-81hr 0.53 >More info 0.53 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
61 Mutant ga1-5 -0.69 >More info -0.37 >More info Ler-1 Original data Comparison of plant hormone related mutant
62 SCR 24hr-S 0.50 >More info 0.55 >More info SCR 0hr endodermis Original data
63 Van SA -0.67 >More info -0.38 >More info Col-0 SA Original data GEO bulk
64 Nicotinamide-73hr -0.65 >More info -0.40 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
65 Ler 10C long-day -0.54 >More info -0.50 >More info Ler 20C long-day seeds Original data GEO bulk
66 Shoot -K -0.58 >More info -0.46 >More info Control-shoot Original data GEO bulk
67 gh3.5D uninoculated 0.61 >More info 0.43 >More info Col-0 48 hpi Original data GEO bulk
68 K starvation (shoot) -0.58 >More info -0.46 >More info Ws (shoot) Original data GEO bulk
69 gpa1 +ABA LF 0.55 >More info 0.48 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
70 6m.KCl -0.49 >More info -0.54 >More info To. KCl 14 day old Roots Original data GEO bulk
71 afb3-1 2h KCl 0.64 >More info 0.38 >More info Ws 2h KCl 2 hours of 5 mM KCl Arabidopsis root Original data GEO bulk
72 tbf1-mock spray -0.53 >More info -0.49 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
73 cop1 Seedling BL 0.67 >More info 0.34 >More info WT Seedling BL Original data GEO bulk
74 6m.KNO3 -0.51 >More info -0.50 >More info To. KNO3 14 day old Roots Original data GEO bulk
75 tga1 tga4 2h KCl -0.44 >More info -0.57 >More info Col 0 2h KCl 5 mM KCl root Original data GEO bulk
76 low CO2 + light -0.50 >More info -0.50 >More info normal CO2 + light Original data GEO bulk
77 Root -K -0.61 >More info -0.39 >More info Control-root Original data GEO bulk
78 WT (Col) glucose 0.45 >More info 0.55 >More info WT (Col) glucose seedlings Original data GEO bulk
79 K starvation (root) -0.61 >More info -0.38 >More info Ws (root) Original data GEO bulk
80 cs26 long day -0.52 >More info -0.47 >More info Leaves-WT-LD leaf Original data GEO bulk
81 short 14-degree- -0.46 >More info -0.53 >More info control short Original data GEO bulk
82 root epidermis and lateral root cap -S 0.46 >More info 0.53 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
83 wrky72-1-NOCO2 INFECTED 0.57 >More info 0.41 >More info WT-NOCO2 INFECTED Original data GEO bulk
84 TiO2 germinant -0.61 >More info -0.37 >More info Millipore Water germinant TiO2 seedling Original data
85 cs26 short-day 0.57 >More info 0.41 >More info Leaves-WT-SD leaf Original data GEO bulk
86 Propiconazole 3 h 0.33 >More info 0.65 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
87 siliques AtHb1 hypoxia 0.54 >More info 0.43 >More info siliques WT hypoxia hypoxia silique Original data GEO bulk
88 csn4-1 mutant 0.59 >More info 0.38 >More info WT dark Original data GEO bulk
89 npr1-3 DCA 48h 0.37 >More info 0.60 >More info npr1-3 MOCK 48h Original data GEO bulk
90 Mutant gh3.5-1D 0.61 >More info 0.35 >More info Col-0 Original data GEO bulk
91 JA 24h -0.55 >More info -0.40 >More info EtOH 24h 24hr Original data GEO bulk
92 ft-1 10C long-day 0.55 >More info 0.40 >More info Ler 10C long-day seeds Original data GEO bulk
93 SHR-GR Time 1H Dex -0.53 >More info -0.42 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
94 vtc2 mature somatic embryo -0.57 >More info -0.38 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
95 Inflorescences Trp1 0.42 >More info 0.53 >More info Inflorescences ler inflorescences Original data GEO bulk
96 Daminozide 3 h -0.53 >More info -0.41 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
97 AFB1 0h 0.38 >More info 0.55 >More info Col 0h Leaf Original data GEO bulk
98 Heat shock optimum 0.28 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
99 Red/FR Light45min 0.28 >More info 0.64 >More info FarRed Light 45min Original data Light treatments
100 syd-2 0.50 >More info 0.42 >More info Ler Original data GEO bulk
101 erf5 erf6 -0.53 >More info -0.38 >More info WT+water water seedlings Original data GEO bulk
102 abi4-102 (II) -0.54 >More info -0.37 >More info Col (II) rosette Original data GEO bulk
103 Shoot apex inflorescence (after bolting) 0.26 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
104 MG132 3 h 0.34 >More info 0.57 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
105 1 h Light Total RNA 0.41 >More info 0.50 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
106 WT light 0.56 >More info 0.34 >More info WT dark Original data GEO bulk
107 ABA 24h -0.50 >More info -0.40 >More info EtOH 24h 24hr Original data GEO bulk
108 21h-DC3000 hrpA 0.40 >More info 0.50 >More info 21h-DC3000 leaves Original data GEO bulk
109 dark +lincomycin -0.39 >More info -0.51 >More info dark -lincomycin Original data GEO bulk
110 Cs shoot -0.32 >More info -0.58 >More info control shoot Original data GEO bulk
111 WT drought -0.55 >More info -0.34 >More info WT control All aerial tissue Original data GEO bulk
112 dde2-2 9 hpi A. brassicicola -0.55 >More info -0.34 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
113 At1g54160 ox 0.39 >More info 0.50 >More info Col-0 Original data GEO bulk
114 Col-0 overexpressing At1g54160 control 0.39 >More info 0.50 >More info WT no treatement Original data GEO bulk
115 polysome mRNA eif3k 0.36 >More info 0.53 >More info polysome mRNA WT aerial part Original data GEO bulk
116 Van -0.59 >More info -0.30 >More info Col-0 Original data GEO bulk
117 3x(p) -0.37 >More info -0.51 >More info 2x two week old seedlings Original data
118 vtc2 day 7 induction 0.55 >More info 0.32 >More info WT day 7 induction day 7 induction of somatic embryogenesis Original data GEO bulk
119 seed germinating in countinuous light 24h SL 0.20 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
120 control leaf (cmt 1d) -0.33 >More info -0.54 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
121 toc1-1-57hr 0.52 >More info 0.34 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
122 Col BTH 0.19 >More info 0.67 >More info Col rosettes Original data GEO bulk
123 pab total 0.57 >More info 0.29 >More info WT total seedling shoot/aerial seedling Original data
124 ago4-1 -0.56 >More info -0.29 >More info WT La-er whole plants Original data GEO bulk
125 toc1-1-89hr 0.56 >More info 0.29 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
126 red illumination +lincomycin 0.50 >More info 0.35 >More info red illumination -lincomycin Original data GEO bulk
127 root hypoxia pCO2 0.35 >More info 0.50 >More info root hypoxia total hypoxia root Original data GEO bulk
128 20h Col-0 0.55 >More info 0.29 >More info 00h Col-0 Original data GEO bulk
129 mutant-line409 -0.29 >More info -0.55 >More info WT-control whole plant Original data GEO bulk
130 hrpA fliC 7h -0.32 >More info -0.52 >More info Mock 7h hrpA fliC Original data GEO bulk
131 leaf chr11-1chr17-1 -0.55 >More info -0.27 >More info leaf Col-0 leaves Original data GEO bulk
132 16h Col-0 0.52 >More info 0.29 >More info 00h Col-0 Original data GEO bulk
133 siliques AtHb1 control 0.29 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
134 dsr1 SA Treated 0.59 >More info 0.22 >More info SA Whole seedling Original data GEO bulk
135 myb61 xylem -0.22 >More info -0.59 >More info wt xylem xylem Original data GEO bulk
136 SA 4mM -0.19 >More info -0.61 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
137 Mutant NahG(leaf) -0.53 >More info -0.26 >More info Col-0 (leaf) Original data GEO bulk
138 SAM SE 35S:AGL15 -0.61 >More info -0.17 >More info SAM SE Col Original data GEO bulk
139 toc1-1-73hr 0.51 >More info 0.27 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
140 cat2-short-day 2d 0.56 >More info 0.22 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
141 phr1 Root-Pi -0.67 >More info -0.10 >More info WT Root+Pi roots Original data GEO bulk
142 OE-HRA1 2HS  -0.65 >More info -0.11 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
143 MYB29 OE 0.51 >More info 0.25 >More info WT for MYB29/76 Original data GEO bulk
144 toc1-1-61hr 0.56 >More info 0.20 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
145 cdpk6-yfp 0.20 >More info 0.56 >More info Kan seedlings Original data GEO bulk
146 Mutant lfy-12(flower) 0.50 >More info 0.25 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
147 rdr6-15 0.15 >More info 0.59 >More info Col-0 plant inflorescence Original data
148 rrd1 IBA -0.56 >More info -0.17 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
149 root cortex 40 mM NaCl -0.50 >More info -0.22 >More info root cortex Original data GEO bulk
150 Whole root - S 3H 0.16 >More info 0.53 >More info Whole root - S 0H Original data GEO bulk
151 ahg3-1 0.62 >More info 0.07 >More info ABA control Original data GEO bulk
152 WT Seedling BL+ABA 0.56 >More info 0.11 >More info WT Seedling BL Original data GEO bulk
153 AtMYB30-ox 2-4h Xanthomonas -0.09 >More info -0.58 >More info WT 2-4h Xanthomonas Original data GEO bulk
154 coi1-2 JA -0.52 >More info -0.12 >More info JA Whole seedling Original data GEO bulk
155 aux1 mutant roots air -0.51 >More info -0.12 >More info roots IAA Original data GEO bulk
156 bri1-116 -0.10 >More info 0.73 >More info Col seedling Original data GEO bulk
157 9m.KNO3 0.52 >More info 0.09 >More info To. KNO3 14 day old Roots Original data GEO bulk
158 rid4 IBA -0.54 >More info -0.06 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
159 Nicotinamide-81hr -0.55 >More info -0.04 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
160 20m.KNO3 0.53 >More info 0.05 >More info To. KNO3 14 day old Roots Original data GEO bulk
161 Nicotinamide-57hr -0.51 >More info -0.07 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
162 Laer pretreat GA Flg22 1h -0.13 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
163 Ambient CO2 LIMITING N NIGHT 0.01 >More info 0.55 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
164 Root sol2 0.55 >More info -0.02 >More info Root wt Original data GEO bulk
165 light 0.71 >More info -0.18 >More info dark light seedling Original data GEO bulk
166 Nicotinamide-49hr -0.54 >More info 0.02 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
167 spx1 spx2 resupplied Pi 4h -0.75 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
168 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
169 ANOXIA 0.12 >More info -0.60 >More info ANOXIA+SUCROSE Original data GEO bulk
170 35S:VND7-VP16-GR+CHX 0.09 >More info -0.56 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
171 IAA7mII over-expressor IAA Treated -0.33 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
172 Col0-PsmES4326-24hpi -0.26 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
173 NJ15 -0.24 >More info 0.53 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
174 FarRed Light 45min 0.36 >More info -0.61 >More info White Light 45min Original data Light treatments
175 Leafminer damaged seedlings -0.33 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk