4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hHypoxia+20&9;Reoxy
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List of experiments correlated with "ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hHypoxia+20&9;Reoxy"  Help Download transcriptome of top 30
Score Experiment Correlation from
ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hHypoxia+20&9;Reoxy		 Correlation to
ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hHypoxia+20&9;Reoxy		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 1.00 >More info 1.00 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
2 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark 0.88 >More info 0.89 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hMockDark 2 h mock dark seedling Original data
3 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight 0.85 >More info 0.87 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
4 rrd2 IBA 0.71 >More info 0.70 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
5 arp6-10 12 ºC -0.66 >More info -0.63 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
6 SAM SE agl15 agl18 double mutant 0.66 >More info 0.60 >More info SAM SE Col Original data GEO bulk
7 miR 0h -0.59 >More info -0.67 >More info Col 0h Leaf Original data GEO bulk
8 KCl germinant 0.67 >More info 0.58 >More info Millipore Water germinant KCl seedling Original data
9 tbf1-mock spray 0.66 >More info 0.59 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
10 TiO2 germinant 0.66 >More info 0.53 >More info Millipore Water germinant TiO2 seedling Original data
11 dark +H2O2 -0.62 >More info -0.53 >More info dark 5 mM H2O2 seedling Original data GEO bulk
12 atmyc2 Seedling Dark 0.60 >More info 0.54 >More info WT Seedling Dark Original data GEO bulk
13 Hydrogen Peroxide 500 uM -0.47 >More info -0.67 >More info Control RB and PER Hydrogen Peroxide Original data
14 Anoxia -0.43 >More info -0.69 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
15 cat2-2; 8h switch to ambient CO2 concentrations; -0.43 >More info -0.69 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
16 tbf1-SA 0.61 >More info 0.49 >More info WT-SA 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
17 nNOS-drought 0.59 >More info 0.51 >More info WT-drought leaf Original data
18 AFB1 0h -0.51 >More info -0.58 >More info Col 0h Leaf Original data GEO bulk
19 3m.KNO3 0.48 >More info 0.60 >More info To. KNO3 14 day old Roots Original data GEO bulk
20 Red/FR Light45min -0.26 >More info -0.81 >More info FarRed Light 45min Original data Light treatments
21 6m.KCl 0.47 >More info 0.59 >More info To. KCl 14 day old Roots Original data GEO bulk
22 roottip hypoxia total -0.45 >More info -0.60 >More info roottip control total Original data GEO bulk
23 polysome mRNA eif3k -0.53 >More info -0.50 >More info polysome mRNA WT aerial part Original data GEO bulk
24 gpa1 -ABA LF 0.32 >More info 0.70 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
25 nNOS-control 0.53 >More info 0.48 >More info WT-control leaf Original data
26 6m.KNO3 0.47 >More info 0.54 >More info To. KNO3 14 day old Roots Original data GEO bulk
27 3m.KCl 0.43 >More info 0.57 >More info To. KCl 14 day old Roots Original data GEO bulk
28 oxt6:AtCPSF30 line -0.56 >More info -0.43 >More info oxt6 mutant Original data GEO bulk
29 arp6-10 2h 27 -degree-C -0.50 >More info -0.48 >More info Col-0 2h at 27 ºC whole seedlings Original data GEO bulk
30 agb1 -ABA LF 0.43 >More info 0.55 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
31 WT-elf18 0.55 >More info 0.42 >More info WT-mock infiltration 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
32 atmyc2 cop1 Seedling BL -0.59 >More info -0.36 >More info WT Seedling BL Original data GEO bulk
33 IAA7mII over-expressor IAA Treated 0.25 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
34 Laer pretreat GA Flg22 1h 0.23 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
35 Dex-rga(delta17) 4h GA4 0.41 >More info 0.53 >More info Vector 4h GA4 shoots Original data GEO bulk
36 npr1-3 DCA 48h -0.41 >More info -0.52 >More info npr1-3 MOCK 48h Original data GEO bulk
37 2hr transitory KNO3 PeR cell 0.43 >More info 0.50 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
38 NJ15 -0.20 >More info -0.73 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
39 Dex-rga(delta17) 2h GA4 0.40 >More info 0.52 >More info Vector 4h GA4 shoots Original data GEO bulk
40 Propiconazole 3 h -0.35 >More info -0.55 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
41 cngc19 -0.37 >More info -0.52 >More info Col-0 root Original data GEO bulk
42 Mutant ga1-5 0.54 >More info 0.31 >More info Ler-1 Original data Comparison of plant hormone related mutant
43 QC pSCR 3h BL -0.07 >More info -0.76 >More info QC pSCR 0h BL brassinosteroid root Original data
44 cngc1-3 -0.31 >More info -0.52 >More info Col-0 root Original data GEO bulk
45 35S::ERF104 H2O 4h -0.53 >More info -0.29 >More info Col-0 H2O 4h Original data GEO bulk
46 2hr continuous KCl and MSX control PeR cell 0.26 >More info 0.55 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
47 Heat Recovery 24 h (shoot) -0.30 >More info -0.50 >More info Stress mock 24 h (shoot) Original data Stress treatments
48 plant (tga2-5-6) 4h phytoprostane A1 -0.29 >More info -0.51 >More info plant (tga2-5-6) 4h control Original data GEO bulk
49 root - 04% oxygen - 30min -0.24 >More info -0.56 >More info root - 21% oxygen - 30min Original data GEO bulk
50 Inflorescences Trp1 -0.23 >More info -0.57 >More info Inflorescences ler inflorescences Original data GEO bulk
51 cop1 Seedling BL -0.62 >More info -0.17 >More info WT Seedling BL Original data GEO bulk
52 mutant-line409 0.20 >More info 0.58 >More info WT-control whole plant Original data GEO bulk
53 Full C2 T2 0.24 >More info 0.54 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
54 short 14-degree- 0.25 >More info 0.52 >More info control short Original data GEO bulk
55 P.syringae vir 4 h (leaf) -0.26 >More info -0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
56 spx1 spx2 resupplied Pi 4h 0.50 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
57 tfl1-1-23ºC -0.24 >More info -0.50 >More info WT-23ºC Original data GEO bulk
58 atmyc2 Seedling BL -0.55 >More info -0.18 >More info WT Seedling BL Original data GEO bulk
59 bri1-116 -0.00 >More info 0.73 >More info Col seedling Original data GEO bulk
60 2hr transitory KNO3 PrR cell -0.03 >More info -0.70 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
61 light -0.54 >More info -0.18 >More info dark light seedling Original data GEO bulk
62 opr3 OPDA 0.5 h -0.20 >More info -0.50 >More info opr3 0 h Original data GEO bulk
63 tga1 tga4 2h KCl 0.18 >More info 0.50 >More info Col 0 2h KCl 5 mM KCl root Original data GEO bulk
64 Shoot -Cs -0.15 >More info -0.51 >More info Control-shoot Original data GEO bulk
65 BAM7 Ox untreated -0.14 >More info -0.50 >More info WT untreated none shoot Original data
66 Paclobutrazol 3 h -0.11 >More info -0.52 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
67 desiccated mature pollen grains 0.10 >More info 0.51 >More info hydrated pollen grains Original data GEO bulk
68 Col0-PsmES4326-24hpi -0.02 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
69 Cs shoot 0.08 >More info 0.50 >More info control shoot Original data GEO bulk
70 WT 3h -P -0.03 >More info -0.54 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
71 Leafminer damaged seedlings -0.00 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
72 Shoot apex inflorescence (after bolting) -0.10 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
73 Col BTH -0.12 >More info 0.67 >More info Col rosettes Original data GEO bulk
74 CCA1-ox 6am non-polysomal 0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
75 FarRed Light 45min -0.05 >More info 0.57 >More info White Light 45min Original data Light treatments
76 +1.6 mM Tween 20 1 h. 0.00 >More info -0.51 >More info +distilled water 1 h. Original data GEO bulk
77 seed germinating in countinuous light 24h SL -0.21 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
78 siliques AtHb1 control -0.12 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
79 Heat shock optimum -0.26 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk