4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on Mutant ga1-5
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "Mutant ga1-5"  Help Download transcriptome of top 30
Score Experiment Correlation from
Mutant ga1-5
Correlation to
Mutant ga1-5
Control Experiment Genotype Treatment Tissue Link to
original data
Experimental
Category
Data set
Details
1 Mutant ga1-5 1.00 >More info 1.00 >More info Ler-1 Original data Comparison of plant hormone related mutant
2 rsa3-1 Na 24h -0.62 >More info -0.71 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
3 phyB mutant 22C 10hrs 0.43 >More info 0.79 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
4 toc1-1-57hr -0.57 >More info -0.63 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
5 miR 0h -0.63 >More info -0.56 >More info Col 0h Leaf Original data GEO bulk
6 BLM+INA -0.58 >More info -0.61 >More info CK BLM and INA seedling Original data
7 R. solani AG2-1 -0.56 >More info -0.60 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
8 R. solani AG8 -0.60 >More info -0.55 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
9 AtLysM RLK1 mutant water -0.52 >More info -0.61 >More info WT water Original data GEO bulk
10 Col-0 DCA 48h -0.51 >More info -0.62 >More info Col-0 MOCK 48h Original data GEO bulk
11 toc1-1-49hr -0.52 >More info -0.59 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
12 46T-Dry -0.58 >More info -0.53 >More info WT-Dry dehydration treatment 1h Original data
13 ACN1-2 -0.37 >More info -0.74 >More info col-7 Original data GEO bulk
14 INA -0.47 >More info -0.64 >More info CK INA seedling Original data
15 Elevated CO2 AMPLE N NIGHT -0.47 >More info -0.64 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
16 atmyc2 cop1 Seedling Dark -0.59 >More info -0.51 >More info WT Seedling Dark Original data GEO bulk
17 sni1 -0.54 >More info -0.56 >More info WT Original data GEO bulk
18 Mutant sav3-2 (WL) -0.42 >More info -0.68 >More info Col-0 (WL) Original data GEO bulk
19 aba3-1 -0.49 >More info -0.61 >More info wt Original data GEO bulk
20 sav3-2 light -0.42 >More info -0.68 >More info Col-0 light seedlings Original data GEO bulk
21 Col-0 mbs1-1 HL 3h 0.51 >More info 0.58 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
22 gun5 control -0.52 >More info -0.57 >More info Col-0 control Original data GEO bulk
23 toc1-1-81hr -0.57 >More info -0.52 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
24 cdpk6-yfp -0.49 >More info -0.60 >More info Kan seedlings Original data GEO bulk
25 Col-0 INA 48h -0.55 >More info -0.51 >More info Col-0 MOCK 48h Original data GEO bulk
26 HARAP aerobic 0.54 >More info 0.52 >More info WT aerobic aerobic Original data GEO bulk
27 toc1-1-73hr -0.54 >More info -0.52 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
28 arp6-10 12 ºC -0.37 >More info -0.69 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
29 NahG 0.41 >More info 0.65 >More info Col-0 Leaves Original data GEO bulk
30 sav3-2 shade -0.51 >More info -0.54 >More info Col-0 shade seedlings Original data GEO bulk
31 Mutant sav3-2 (SH) -0.51 >More info -0.54 >More info Col-0 (SH) Original data GEO bulk
32 toc1-1-85hr -0.49 >More info -0.56 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
33 UV Stress 24 h (shoot) -0.48 >More info -0.57 >More info Stress mock 24 h (shoot) Original data Stress treatments
34 Mutant ufo-1(flower) -0.56 >More info -0.48 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
35 35S::ERF104 H2O 4h -0.58 >More info -0.46 >More info Col-0 H2O 4h Original data GEO bulk
36 Mutant NahG(leaf) 0.52 >More info 0.52 >More info Col-0 (leaf) Original data GEO bulk
37 SCL3 OE 0.51 >More info 0.52 >More info Col-0 whole root Original data GEO bulk
38 A1-1 -0.51 >More info -0.52 >More info WT Original data GEO bulk
39 Dex-rga(delta17) 4h GA4 0.55 >More info 0.47 >More info Vector 4h GA4 shoots Original data GEO bulk
40 AFB1 0h -0.55 >More info -0.47 >More info Col 0h Leaf Original data GEO bulk
41 T6 leaf-drought 0.38 >More info 0.64 >More info T6 leaf-well watered Original data GEO bulk
42 A. lyrata 0.48 >More info 0.54 >More info A. thaliana mature leaves before flowering Original data GEO bulk
43 sdg2 -0.51 >More info -0.50 >More info wt seedling Original data GEO bulk
44 WT-NOCO2 INFECTED -0.60 >More info -0.41 >More info WT-MOCK Original data GEO bulk
45 WT +Pep2 10h -0.59 >More info -0.42 >More info WT untreated Pep2 Original data GEO bulk
46 Col-0 INA 6d -0.57 >More info -0.43 >More info Col-0 MOCK 6d Original data GEO bulk
47 cop1 Seedling BL -0.59 >More info -0.41 >More info WT Seedling BL Original data GEO bulk
48 npr1-3 DCA 48h -0.47 >More info -0.53 >More info npr1-3 MOCK 48h Original data GEO bulk
49 phr1 phl1 Root-Pi 0.48 >More info 0.52 >More info WT Shoot+Pi roots Original data GEO bulk
50 camta3-1 -0.49 >More info -0.50 >More info WT Original data GEO bulk
51 0.2µM SMX -0.35 >More info -0.64 >More info control Whole seedling Original data GEO bulk
52 A. thaliana-A. lyrata hybrid 0.51 >More info 0.47 >More info A. thaliana mature leaves before flowering Original data GEO bulk
53 Triazolopyrimidine EC50 -0.52 >More info -0.46 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
54 wnk8-1 untreated 0.54 >More info 0.44 >More info Col-0 untreated seedlings Original data GEO bulk
55 atmyc2 cop1 Seedling BL -0.58 >More info -0.40 >More info WT Seedling BL Original data GEO bulk
56 eds16 whole leaf 3dpi 0.35 >More info 0.63 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
57 oas-a1.1 Cd 18h -0.42 >More info -0.56 >More info Cd 18h root Root Original data GEO bulk
58 SA -0.47 >More info -0.51 >More info WT mock Whole seedling Original data GEO bulk
59 Col-0 Root 100 mM ATP 30 min -0.53 >More info -0.44 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
60 ACN1-2 Sucrose -0.28 >More info -0.68 >More info Col-7 Sucrose Original data GEO bulk
61 csn4-1 mutant -0.52 >More info -0.44 >More info WT dark Original data GEO bulk
62 camta3-2 -0.44 >More info -0.52 >More info WT Original data GEO bulk
63 phr1 Shoot-Pi -0.41 >More info -0.55 >More info WT Root-Pi shoots Original data GEO bulk
64 Elevated CO2 AMPLE N DAY -0.45 >More info -0.51 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
65 ckh1 CK200 -0.52 >More info -0.43 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
66 35SpBVR3 0.50 >More info 0.45 >More info WT Original data GEO bulk
67 Col-0 +ABA LF 0.45 >More info 0.50 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
68 myb3 myb3r4d -0.42 >More info -0.53 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
69 S15-118 -0.45 >More info -0.50 >More info wt Original data GEO bulk
70 Homozygous-AtcesA6 0.52 >More info 0.42 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
71 wavy -0.44 >More info -0.50 >More info WT Original data GEO bulk
72 root - 01% oxygen - 2h 0.25 >More info 0.68 >More info root - 21% oxygen - 2h Original data GEO bulk
73 Primisulfuron EC50 -0.52 >More info -0.41 >More info Carrier (primisulfuron) Original data GEO bulk
74 pepr1-1 Pepr2-3 +Pep2 10h 0.52 >More info 0.41 >More info WT +Pep2 10h Pep2 Original data GEO bulk
75 nNOS-drought 0.52 >More info 0.41 >More info WT-drought leaf Original data
76 WT Atum 1h -0.41 >More info -0.52 >More info WT 0h Leaf tissue Original data GEO bulk
77 erf5 erf6 0.41 >More info 0.52 >More info WT+water water seedlings Original data GEO bulk
78 OE WRKY63.3 high light -0.43 >More info -0.50 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
79 sid2 0.36 >More info 0.56 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
80 root - 04% oxygen - 2h 0.18 >More info 0.74 >More info root - 21% oxygen - 2h Original data GEO bulk
81 root - 08% oxygen - 2h 0.10 >More info 0.81 >More info root - 21% oxygen - 2h Original data GEO bulk
82 +1.6 mM Tween 20 1 h. -0.37 >More info -0.54 >More info +distilled water 1 h. Original data GEO bulk
83 WT chitooctaose -0.50 >More info -0.41 >More info WT water Original data GEO bulk
84 toc1-1-53hr -0.52 >More info -0.38 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
85 eds16 whole leaf 0h UI 0.39 >More info 0.51 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
86 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight 0.33 >More info 0.57 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
87 seed germinating in countinuous light 24h SL 0.22 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
88 erf104-ko H2O 4h -0.54 >More info -0.34 >More info Col-0 H2O 4h Original data GEO bulk
89 SAM SE 35S:AGL15 0.53 >More info 0.35 >More info SAM SE Col Original data GEO bulk
90 root - 08% oxygen - 30min 0.18 >More info 0.70 >More info root - 21% oxygen - 30min Original data GEO bulk
91 Mutant ag-12(flower) -0.52 >More info -0.35 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
92 OH1 -0.51 >More info -0.36 >More info Col-0 leaves Original data GEO bulk
93 Col whole leaf 5 dpi -0.37 >More info -0.50 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
94 oligomycin 1 h -0.34 >More info -0.52 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
95 A. halleri 0.33 >More info 0.53 >More info A. thaliana mature leaves before flowering Original data GEO bulk
96 rrd2 IBA 0.29 >More info 0.57 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
97 Mutant cry1 0.53 >More info 0.32 >More info Col-0 Original data GEO bulk
98 Elevated CO2 expanding leaf -0.53 >More info -0.32 >More info Ambient CO2 expanding leaf expanding leaf Original data
99 cry1 low light 0.53 >More info 0.32 >More info Col-O low light Original data GEO bulk
100 Col whole leaf 1dpi 0.32 >More info 0.53 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
101 Laer pretreat JA Flg22 0h 0.31 >More info 0.54 >More info Laer pretreat water control leaf discs Original data GEO bulk
102 arp6-10 2h 27 -degree-C -0.31 >More info -0.54 >More info Col-0 2h at 27 ºC whole seedlings Original data GEO bulk
103 ANOXIA 0.20 >More info 0.65 >More info ANOXIA+SUCROSE Original data GEO bulk
104 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy
0.31 >More info 0.54 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy
2 h hypoxia +2' reoxy seedling Original data
105 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark 0.32 >More info 0.52 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hMockDark 2 h mock dark seedling Original data
106 S5 -0.25 >More info -0.59 >More info WT Original data GEO bulk
107 WT-16ºC 0.33 >More info 0.50 >More info WT-23ºC Original data GEO bulk
108 camta2/3 warm -0.53 >More info -0.29 >More info WT warm entire aerial part Original data GEO bulk
109 WT +elf18 10h -0.51 >More info -0.31 >More info WT untreated elf18 Original data GEO bulk
110 camta1/3 warm -0.56 >More info -0.25 >More info WT warm entire aerial part Original data GEO bulk
111 3x(m) -0.51 >More info -0.28 >More info 2x two week old seedlings Original data
112 spx1 spx2 resupplied Pi 4h 0.55 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
113 shoot control pRBCS -0.51 >More info -0.26 >More info shoot control total Original data GEO bulk
114 epiF3 0.50 >More info 0.27 >More info WT Col-0 aerial part Original data
115 PNO8 12 h 0.23 >More info 0.54 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
116 agb1 gpa1 -ABA LF 0.23 >More info 0.54 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
117 AtMYB30-as 90-105 min Xanthomonas -0.21 >More info -0.56 >More info WT 90-105 min Xanthomonas Original data GEO bulk
118 eds16 whole leaf 7d UI 0.22 >More info 0.54 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
119 Mutant bri1 0.64 >More info 0.10 >More info Ws-2 Original data Comparison of plant hormone related mutant
120 Laer pretreat GA Flg22 1h 0.03 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
121 C24-3h IAA -0.50 >More info -0.23 >More info C24-0h IAA whole plant Original data GEO bulk
122 opr3 OPDA 0.5 h -0.20 >More info -0.53 >More info opr3 0 h Original data GEO bulk
123 coi1 0.13 >More info 0.60 >More info Col-0 Leaves Original data GEO bulk
124 BR -0.61 >More info -0.10 >More info WT-mock BR dark-grown seedlings Original data GEO bulk
125 bri1-116 -0.03 >More info 0.73 >More info Col seedling Original data GEO bulk
126 Distal half (leaf7) -0.50 >More info -0.19 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
127 Senescing leaf -0.50 >More info -0.19 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
128 Rosette leaf No2 -0.50 >More info -0.18 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
129 eds16 whole leaf 6hpi 0.50 >More info 0.16 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
130 root - 01% oxygen - 30min 0.08 >More info 0.58 >More info root - 21% oxygen - 30min Original data GEO bulk
131 ddm1 F6 inflorescence -0.51 >More info -0.14 >More info wt Col inflorescence unopened flower buds Original data
132 root - 04% oxygen - 48h 0.05 >More info 0.59 >More info root - 21% oxygen - 48h Original data GEO bulk
133 mkk1 24h BTH rep 0.07 >More info 0.56 >More info Col-0 24h BTH rep Original data GEO bulk
134 sta1 -0.50 >More info -0.13 >More info WT Original data GEO bulk
135 root - 04% oxygen - 30min 0.08 >More info 0.55 >More info root - 21% oxygen - 30min Original data GEO bulk
136 IAA7mII over-expressor IAA Treated -0.06 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
137 WT Root Hypoxia 0.11 >More info 0.51 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
138 rosette leaves bdg 0.07 >More info 0.54 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
139 PNO8 3 h -0.57 >More info -0.04 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
140 estradiole-induced ANAC059 -0.06 >More info -0.54 >More info transgenic (empty vector inducible system) Original data GEO bulk
141 shoot hypoxia total 0.01 >More info 0.53 >More info shoot control total Original data GEO bulk
142 NJ15 0.03 >More info -0.57 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
143 Shoot apex inflorescence (after bolting) -0.12 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
144 dark +H2O2 0.01 >More info -0.54 >More info dark 5 mM H2O2 seedling Original data GEO bulk
145 Aerobic e1 ate2 -0.06 >More info 0.57 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
146 WT Shoot Hypoxia -0.09 >More info 0.59 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
147 etiolated cop1 -0.53 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
148 root longitudinal zone-3 -Fe -0.09 >More info 0.57 >More info root longitudinal zone-3 standard Original data GEO bulk
149 IAA 0.5 h 0.06 >More info -0.52 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
150 Col0-PsmES4326-24hpi -0.18 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
151 CCA1-ox 6am non-polysomal -0.08 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
152 Leafminer damaged seedlings -0.17 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
153 Heat shock optimum -0.32 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
154 siliques AtHb1 control -0.20 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
155 Col BTH -0.40 >More info 0.67 >More info Col rosettes Original data GEO bulk