4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on A. thaliana-A. lyrata hybrid
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List of experiments correlated with "A. thaliana-A. lyrata hybrid"  Help Download transcriptome of top 30
Score Experiment Correlation from
A. thaliana-A. lyrata hybrid		 Correlation to
A. thaliana-A. lyrata hybrid		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 A. thaliana-A. lyrata hybrid 1.00 >More info 1.00 >More info A. thaliana mature leaves before flowering Original data GEO bulk
2 A. lyrata 0.92 >More info 0.83 >More info A. thaliana mature leaves before flowering Original data GEO bulk
3 A. halleri 0.82 >More info 0.74 >More info A. thaliana mature leaves before flowering Original data GEO bulk
4 camta3-2 -0.75 >More info -0.79 >More info WT Original data GEO bulk
5 sid2-1 cold 0.74 >More info 0.79 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
6 CLO 4mM -0.79 >More info -0.72 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
7 A. thaliana-A. halleri hybrid 0.77 >More info 0.74 >More info A. thaliana mature leaves before flowering Original data GEO bulk
8 CMV-WT -0.74 >More info -0.76 >More info Mock-At Aerial tissues Original data GEO bulk
9 sni1 -0.73 >More info -0.77 >More info WT Original data GEO bulk
10 cpr5scv1 -0.76 >More info -0.73 >More info WT(COL) Original data GEO bulk
11 eds16 whole leaf 6hpi 0.66 >More info 0.83 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
12 Elevated CO2 AMPLE N DAY -0.72 >More info -0.77 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
13 eds16 whole leaf 5dpi 0.70 >More info 0.78 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
14 UV Stress 24 h (shoot) -0.72 >More info -0.75 >More info Stress mock 24 h (shoot) Original data Stress treatments
15 Col-0 INA 48h -0.70 >More info -0.76 >More info Col-0 MOCK 48h Original data GEO bulk
16 pmr5 pmr6 -0.75 >More info -0.71 >More info Col-0 Original data GEO bulk
17 smg7b-1 -0.75 >More info -0.71 >More info WT whole plant Original data GEO bulk
18 Col whole leaf 5dpi -0.70 >More info -0.76 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
19 AFB1 0h -0.68 >More info -0.77 >More info Col 0h Leaf Original data GEO bulk
20 35S:RPS4 eds1-2 24h 0.74 >More info 0.71 >More info 35S:RPS4 24h leaves Original data
21 WT-SA -0.70 >More info -0.75 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
22 OE WRKY63.3 high light -0.74 >More info -0.71 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
23 Cor 24h -0.70 >More info -0.74 >More info Mock 24h Cor Original data GEO bulk
24 vtc1 (II) -0.74 >More info -0.70 >More info Col (II) rosette Original data GEO bulk
25 cpr5 -0.68 >More info -0.75 >More info WT(COL) Original data GEO bulk
26 Elevated CO2 expanding leaf -0.76 >More info -0.67 >More info Ambient CO2 expanding leaf expanding leaf Original data
27 Elevated CO2 AMPLE N NIGHT -0.69 >More info -0.74 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
28 pmr5 -0.73 >More info -0.70 >More info Col-0 Original data GEO bulk
29 camta2/3 warm -0.74 >More info -0.68 >More info WT warm entire aerial part Original data GEO bulk
30 camta1/3 warm -0.74 >More info -0.68 >More info WT warm entire aerial part Original data GEO bulk
31 npr1 sni1 brca2a SA 0.67 >More info 0.75 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
32 edr1 18 h powdery mildew -0.71 >More info -0.71 >More info Col-0 18 h powdery mildew Original data GEO bulk
33 SLWF infested -0.74 >More info -0.68 >More info SLWF uninfested rosette tissue Original data GEO bulk
34 ataf1-1 mutant Col-0 Bgh inoculated -0.74 >More info -0.67 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
35 cpr5 -0.72 >More info -0.69 >More info WT seedling Original data GEO bulk
36 GST 4 h (leaf) -0.72 >More info -0.69 >More info Mock 4 h (leaf) Original data Elicitor treatments
37 vtc2 (I) -0.72 >More info -0.68 >More info Col (I) rosette Original data GEO bulk
38 4C 2h(SOIL) -0.71 >More info -0.68 >More info 4C 0h(SOIL) Original data GEO bulk
39 Col whole leaf 7dpi -0.71 >More info -0.68 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
40 Col-0 INA 6d -0.67 >More info -0.72 >More info Col-0 MOCK 6d Original data GEO bulk
41 Col ozone 2d -0.66 >More info -0.73 >More info Col clean-air 2d ozone Original data GEO bulk
42 upf1 -0.70 >More info -0.68 >More info WT whole plant Original data GEO bulk
43 S58-2 -0.72 >More info -0.66 >More info wt Original data GEO bulk
44 seedlings-week-old RECA1-overexpressing
transgenic		 -0.74 >More info -0.64 >More info seedlings-week-old Col-0 seedlings Original data
45 upf3 -0.71 >More info -0.67 >More info WT whole plant Original data GEO bulk
46 35S:RPS4 eds1-2 2h 0.63 >More info 0.74 >More info 35S:RPS4 2h leaves Original data
47 WT in -N -0.73 >More info -0.64 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
48 Col ozone 3h -0.68 >More info -0.69 >More info Col clean-air 3h ozone Original data GEO bulk
49 35S:RPS4 eds1-2 8h 0.71 >More info 0.66 >More info 35S:RPS4 8h leaves Original data
50 cpr5npr1 -0.72 >More info -0.64 >More info WT(COL) Original data GEO bulk
51 GA -0.72 >More info -0.64 >More info none GA Rosette Original data GEO bulk
52 camta1/2/3 warm -0.73 >More info -0.63 >More info WT warm entire aerial part Original data GEO bulk
53 bZIP1ko mutant N+Light- -0.71 >More info -0.65 >More info WT-sib N+Light- whole plant Original data GEO bulk
54 rpoTmp(line) MLD stressed -0.60 >More info -0.75 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
55 cpr5npr1svi1 -0.71 >More info -0.64 >More info WT(COL) Original data GEO bulk
56 Mutant NahG(leaf) 0.68 >More info 0.67 >More info Col-0 (leaf) Original data GEO bulk
57 bak1-3 +Pep2 10h -0.74 >More info -0.60 >More info WT +Pep2 10h Pep2 Original data GEO bulk
58 pepr1-1 Pepr2-3 +Pep2 2h 0.69 >More info 0.65 >More info WT +Pep2 2h Pep2 Original data GEO bulk
59 gh3.5D uninoculated 0.69 >More info 0.65 >More info Col-0 48 hpi Original data GEO bulk
60 Primisulfuron EC50 -0.69 >More info -0.64 >More info Carrier (primisulfuron) Original data GEO bulk
61 sid2 0.60 >More info 0.73 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
62 CMP 4hr -0.70 >More info -0.63 >More info Acetone 4hr root Original data GEO bulk
63 Mutant siz1-3 (Drought) -0.72 >More info -0.61 >More info Col-0 (Drought) Original data GEO bulk
64 WT-NOCO2 INFECTED -0.74 >More info -0.59 >More info WT-MOCK Original data GEO bulk
65 npr1 sni1 SA -0.72 >More info -0.61 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
66 siz1-3 drought -0.72 >More info -0.61 >More info Col-0 drought Original data GEO bulk
67 Shoot -K -0.68 >More info -0.65 >More info Control-shoot Original data GEO bulk
68 K starvation (shoot) -0.68 >More info -0.65 >More info Ws (shoot) Original data GEO bulk
69 wavy -0.65 >More info -0.67 >More info WT Original data GEO bulk
70 aox1a(line) untreated 0.64 >More info 0.68 >More info WT(Col0) untreated (control aox1a) leaf Original data
71 GST NPP1 4 h (leaf) -0.69 >More info -0.63 >More info Mock 4 h (leaf) Original data Elicitor treatments
72 pvip1 pvip2 -0.69 >More info -0.63 >More info Col-0 whole rosettes Original data GEO bulk
73 flu -0.66 >More info -0.65 >More info WT Col Original data GEO bulk
74 gh3.5-1D 48 hpi -0.69 >More info -0.62 >More info Col-0 uninoculated Original data GEO bulk
75 cs26 short-day 0.68 >More info 0.63 >More info Leaves-WT-SD leaf Original data GEO bulk
76 BLM+INA -0.66 >More info -0.65 >More info CK BLM and INA seedling Original data
77 Col-0 DCA 48h -0.60 >More info -0.71 >More info Col-0 MOCK 48h Original data GEO bulk
78 CMP 24hr -0.70 >More info -0.61 >More info Acetone 24hr root Original data GEO bulk
79 IMI 4mM -0.73 >More info -0.58 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
80 Cor 10h -0.66 >More info -0.64 >More info Mock 10h Cor Original data GEO bulk
81 TNT-seedlings -0.61 >More info -0.69 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
82 aba3-1 -0.73 >More info -0.56 >More info wt Original data GEO bulk
83 ceh1 mutant -0.63 >More info -0.66 >More info Parent line Original data
84 miR 0h -0.72 >More info -0.57 >More info Col 0h Leaf Original data GEO bulk
85 WT powdery mildew -0.64 >More info -0.65 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
86 edr1 36 h powdery mildew -0.71 >More info -0.58 >More info Col-0 36 h powdery mildew Original data GEO bulk
87 Col whole leaf amplified 5 dpi -0.58 >More info -0.71 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
88 WT AntimycinA 3h -0.67 >More info -0.62 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
89 Osmotic Stress 24 h (shoot) -0.67 >More info -0.61 >More info Stress mock 24 h (shoot) Original data Stress treatments
90 Col-0 48 hpi -0.66 >More info -0.62 >More info Col-0 uninoculated Original data GEO bulk
91 AgNO3 3 h -0.63 >More info -0.65 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
92 Triazolopyrimidine EC50 -0.67 >More info -0.61 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
93 eds16 whole leaf 0h UI 0.60 >More info 0.68 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
94 abi4 vtc2 (I) -0.68 >More info -0.60 >More info Col (I) rosette Original data GEO bulk
95 abi4-102 (II) -0.74 >More info -0.53 >More info Col (II) rosette Original data GEO bulk
96 CAX1/CAX3 mutant -0.69 >More info -0.58 >More info Col whole plant Original data GEO bulk
97 +1.6 mM Tween 20 1 h. -0.65 >More info -0.62 >More info +distilled water 1 h. Original data GEO bulk
98 P.syringae AvrRpt2 4 h (leaf) -0.65 >More info -0.62 >More info Mock 4 h (leaf) Original data Elicitor treatments
99 S15-118 -0.69 >More info -0.58 >More info wt Original data GEO bulk
100 flu over-tAPX -0.62 >More info -0.65 >More info WT Col Original data GEO bulk
101 Elevated CO2 fully expanded leaf -0.70 >More info -0.56 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
102 low CO2 + light -0.66 >More info -0.60 >More info normal CO2 + light Original data GEO bulk
103 3x(m) -0.53 >More info -0.73 >More info 2x two week old seedlings Original data
104 Sulfometuron EC50 -0.65 >More info -0.61 >More info Carrier Original data GEO bulk
105 rosette leaves fdh -0.69 >More info -0.57 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
106 del1-1 mutant 5d uninfected -0.65 >More info -0.60 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
107 oas-a1.1 Cd 18h -0.60 >More info -0.65 >More info Cd 18h root Root Original data GEO bulk
108 HARAP aerobic 0.61 >More info 0.64 >More info WT aerobic aerobic Original data GEO bulk
109 aox1a(line) MLD stressed -0.59 >More info -0.66 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
110 HopZ1a treated -0.65 >More info -0.60 >More info col Original data GEO bulk
111 SA 4mM -0.80 >More info -0.45 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
112 smg5-2 -0.63 >More info -0.61 >More info WT whole plant Original data GEO bulk
113 eds16 laser microdissected 5 dpi 0.65 >More info 0.59 >More info Col laser microdissected 5 dpi LMD leaf epidermal and mesophyll cells Original data GEO bulk
114 myb3 myb3r4d -0.60 >More info -0.64 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
115 toc1-1-53hr -0.67 >More info -0.57 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
116 camta3-1 -0.67 >More info -0.56 >More info WT Original data GEO bulk
117 ein5-1 ski2-3 -0.68 >More info -0.55 >More info Col-0 aerial tissue Original data
118 Mutant siz1-3 -0.62 >More info -0.61 >More info Col-0 Original data GEO bulk
119 anac017-2 AntimycinA 3h 0.67 >More info 0.56 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
120 Col whole leaf 5 dpi -0.55 >More info -0.68 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
121 siz1-3 control -0.62 >More info -0.61 >More info Col-0 control Original data GEO bulk
122 LTN008-2 aza-dc -0.72 >More info -0.51 >More info LTN012-2 Mock Original data
123 8h-DC3000 avrRpm1 -0.59 >More info -0.64 >More info 8h-DC3000 leaves Original data GEO bulk
124 pad4-PsmES4326-24hpi 0.67 >More info 0.55 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
125 OH1 -0.56 >More info -0.66 >More info Col-0 leaves Original data GEO bulk
126 aox1a:rpoTmp untreated -0.59 >More info -0.63 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
127 WT 3h -P -0.60 >More info -0.62 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
128 efr-1 +elf18 10h 0.65 >More info 0.57 >More info WT +elf18 10h elf18 Original data GEO bulk
129 Flagellin 4 h (leaf) -0.65 >More info -0.57 >More info Mock 4 h (leaf) Original data Elicitor treatments
130 wrky33 Bc inoculation 14h -0.75 >More info -0.46 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
131 stn7-1 0.69 >More info 0.52 >More info Col-0 rosette leaves Original data GEO bulk
132 ein2-1 9 hpi A. brassicicola -0.72 >More info -0.49 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
133 Te ozone -0.72 >More info -0.49 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
134 Leafminer locally damaged thaliana seedlings -0.65 >More info -0.55 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
135 pepr1-1 Pepr2-3 +Pep2 10h 0.66 >More info 0.54 >More info WT +Pep2 10h Pep2 Original data GEO bulk
136 Col-0 9 hpi A. brassicicola -0.67 >More info -0.53 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
137 UV -0.66 >More info -0.54 >More info WT aerial region Original data GEO bulk
138 psae1-3 stn7-1 -0.72 >More info -0.48 >More info WS rosette leaves Original data GEO bulk
139 Fenclorim 4hr -0.61 >More info -0.59 >More info Acetone 4hr root Original data GEO bulk
140 Cor hrpS 10h -0.71 >More info -0.49 >More info Mock 10h Cor hrpS Original data GEO bulk
141 phyB mutant 22C 10hrs 0.51 >More info 0.69 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
142 Leaf wounded -0.46 >More info -0.74 >More info Leaf control vegetative leaf Original data GEO bulk
143 M6PR transgenic 0mM NaCl -0.68 >More info -0.51 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
144 20d after anthesis -0.64 >More info -0.55 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
145 bHLH122 ox 0.62 >More info 0.57 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
146 DFPM -0.66 >More info -0.53 >More info control Original data GEO bulk
147 atmospheric CO2 low Mg shoot -0.74 >More info -0.45 >More info atmospheric CO2 normal Mg shoot Shoot Original data
148 Lipopolysaccaride4 h (leaf) -0.67 >More info -0.52 >More info Mock 4 h (leaf) Original data Elicitor treatments
149 WT 2-4h Xanthomonas -0.65 >More info -0.53 >More info WT T0 Original data GEO bulk
150 SOS1 0mM NaCl -0.64 >More info -0.54 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
151 WT cold -0.66 >More info -0.52 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
152 toc1-1-77hr -0.58 >More info -0.60 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
153 downy mildew cotyledons late stage -0.69 >More info -0.49 >More info mock inoculated Cotyledons Original data GEO bulk
154 cs26 long day -0.72 >More info -0.46 >More info Leaves-WT-LD leaf Original data GEO bulk
155 WT Col-0 Bgh inoculated -0.59 >More info -0.59 >More info WT Col-0 Un-inoculated Original data GEO bulk
156 coi1-2 -0.55 >More info -0.62 >More info Col-0 mock Whole seedling Original data GEO bulk
157 R. solani AG8 -0.64 >More info -0.53 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
158 mkk1/mkk2 control rep -0.62 >More info -0.55 >More info Col-0 Time 0 rep Original data GEO bulk
159 WT+chitooctaose -0.59 >More info -0.58 >More info WT+water chitooctaose seedlings Original data GEO bulk
160 Col-0 under 4 days salt -0.64 >More info -0.52 >More info Col-0 under control 4 days salt treatment rosette Original data
161 Col laser microdissected 5 dpi -0.60 >More info -0.56 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
162 FLIGHT TAGESB plate6 SHOOTS -0.64 >More info -0.52 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
163 Col-0 C2H4 24h -0.65 >More info -0.51 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
164 pmr4-1 powdery mildew -0.64 >More info -0.52 >More info WT powdery mildew uninoculated Original data GEO bulk
165 RPL18 TuMV inoculated total RNA -0.49 >More info -0.67 >More info mock inoculated total RNA PO Original data GEO bulk
166 rsa3-1 Na 24h -0.47 >More info -0.69 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
167 8hr-pH4.5 -0.61 >More info -0.54 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
168 WT H2O2 3h -0.59 >More info -0.56 >More info WT water 3h 3h_H2O2 Original data GEO bulk
169 Col-0 ozone- (control genotype tga2 tag5 tga6) -0.73 >More info -0.42 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
170 Cycloheximide 3 h -0.62 >More info -0.53 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
171 Total RNA 35S:HF-RPL18 -0.66 >More info -0.49 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
172 hrpA 7h -0.60 >More info -0.55 >More info Mock 7h hrpA Original data GEO bulk
173 toc1-1-57hr -0.58 >More info -0.57 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
174 Col-Luc WT 3h antimycin A -0.67 >More info -0.48 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
175 DC3000 24h -0.65 >More info -0.50 >More info Mock 24h DC3000 Original data GEO bulk
176 aphid saliva treated -0.45 >More info -0.70 >More info control aphid saliva treated leaves Original data GEO bulk
177 Myzus persicae saliva -0.45 >More info -0.70 >More info Control Original data GEO bulk
178 WT 3H Cold -0.36 >More info -0.79 >More info WT control Original data GEO bulk
179 35S::PI ap3-3 35S::AP-GR +DEX -0.49 >More info -0.66 >More info 0hr DEX Original data GEO bulk
180 Phaseolicola 2 h (leaf) -0.66 >More info -0.48 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
181 Imidazolinone EC50 -0.58 >More info -0.56 >More info Carrier (Imidazolinone) Original data GEO bulk
182 AvrRpm1 2 h (leaf) -0.63 >More info -0.51 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
183 toc1-1-49hr -0.66 >More info -0.48 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
184 HopZ1a treated ulp1c ulp1d -0.58 >More info -0.56 >More info col Original data GEO bulk
185 cat2-2; harvested 8h continiously maintained in
high CO2;		 0.75 >More info 0.39 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
186 col-5 DC3000 12h -0.54 >More info -0.60 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
187 Col-0 ozone- (control genotype coi1-16 ein2 sid2) -0.70 >More info -0.44 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
188 atmospheric CO2 high Mg shoot -0.69 >More info -0.45 >More info atmospheric CO2 normal Mg shoot Shoot Original data
189 Col-0 ozone -0.70 >More info -0.44 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
190 E.coli TUV86 2 fliC 7h -0.58 >More info -0.55 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
191 Col leaves 48h LT -0.60 >More info -0.53 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
192 dense canopy -0.54 >More info -0.59 >More info single (control) petiole Original data GEO bulk
193 til1-1 22C -0.62 >More info -0.51 >More info Col-0 22C Original data GEO bulk
194 coi1-16 ein2 sid2 ctrl 0.71 >More info 0.42 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
195 Nicotinamide-57hr -0.66 >More info -0.47 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
196 SA -0.61 >More info -0.51 >More info WT mock Whole seedling Original data GEO bulk
197 WT +elf18 10h -0.63 >More info -0.49 >More info WT untreated elf18 Original data GEO bulk
198 seedlings protease IV -0.63 >More info -0.49 >More info seedlings nontreated control whole seedling Original data
199 atgsnor1-1 0.69 >More info 0.43 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
200 ice1 control -0.55 >More info -0.56 >More info WT control Original data GEO bulk
201 camta1/2/3 24h cold -0.56 >More info -0.55 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
202 oligomycin 4 h -0.61 >More info -0.50 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
203 cat2-hCO2 0.75 >More info 0.36 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
204 12h-DC3000 avrRpm1 -0.61 >More info -0.50 >More info 12h-DC3000 leaves Original data GEO bulk
205 Nicotinamide-49hr -0.60 >More info -0.51 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
206 amiRAP aerobic 0.57 >More info 0.54 >More info WT aerobic aerobic Original data GEO bulk
207 col-5 hrpA 12h -0.54 >More info -0.57 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
208 Dex-rga(delta17) 4h GA4 0.51 >More info 0.59 >More info Vector 4h GA4 shoots Original data GEO bulk
209 Atwrky63 0.67 >More info 0.43 >More info Col0 none leaf Original data GEO bulk
210 AvrRpt2 Col-0 6hpi -0.64 >More info -0.46 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
211 seedling 6h after HZE WT -0.56 >More info -0.54 >More info seedling day 1 unirradiated WT 6h Original data
212 S14-150 -0.66 >More info -0.44 >More info wt Original data GEO bulk
213 whole roots 140 mM NaCl 30 minutes -0.55 >More info -0.55 >More info whole roots standard Original data GEO bulk
214 WT chitooctaose -0.58 >More info -0.52 >More info WT water Original data GEO bulk
215 GO5; 8h switch to ambient CO2 concentrations; -0.58 >More info -0.52 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
216 35S::ERF104 Flg22 4h -0.55 >More info -0.55 >More info 35S::ERF104 H2O 4h Original data GEO bulk
217 Col whole leaf 1dpi 0.56 >More info 0.54 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
218 pho1 -0.69 >More info -0.41 >More info Col2WT Original data GEO bulk
219 root Dosed gold -0.63 >More info -0.46 >More info root No gold .125 mM gold 24 h roots Original data
220 0.125 mM gold 24 h -0.63 >More info -0.46 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
221 B.cinerea 18 h infection -0.54 >More info -0.55 >More info Mock 18 h Original data Botrytis cinerea infection
222 Botrytis cinerea 18h -0.54 >More info -0.55 >More info control 18h Original data GEO bulk
223 WT +elf18 2h -0.58 >More info -0.51 >More info WT untreated elf18 Original data GEO bulk
224 Mutant ufo-1(flower) -0.58 >More info -0.51 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
225 Mutant coi1(leaf) 0.59 >More info 0.50 >More info Col-0 (leaf) Original data GEO bulk
226 coi1-16 ein2 sid2 ozone -0.73 >More info -0.36 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
227 csn5 (csn5a-2 csn5b) light -0.57 >More info -0.52 >More info WT light Original data GEO bulk
228 rosette Dark Wounded -0.48 >More info -0.61 >More info rosette Dark Control Original data GEO bulk
229 hst5 -0.55 >More info -0.53 >More info Col-0 Original data GEO bulk
230 whole roots 140 mM NaCl 1 hour -0.60 >More info -0.48 >More info whole roots standard Original data GEO bulk
231 R. solani AG2-1 -0.57 >More info -0.51 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
232 Nicotinamide-53hr -0.66 >More info -0.42 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
233 miR393 flg22 2h -0.59 >More info -0.49 >More info WT 0h Leaf tissue Original data GEO bulk
234 OE WRKY40.4 0.63 >More info 0.45 >More info OE WRKY40.4 none leaf Original data GEO bulk
235 hrcC -0.58 >More info -0.50 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
236 Whole root - low pH 12H -0.55 >More info -0.53 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
237 epiF3 0.72 >More info 0.36 >More info WT Col-0 aerial part Original data
238 HSP90 Reduced RNAi-B1 -0.54 >More info -0.54 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
239 csn3-1 light -0.55 >More info -0.52 >More info WT light Original data GEO bulk
240 Nicotinamide-81hr -0.65 >More info -0.42 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
241 cov1 cov2 stem Base -0.66 >More info -0.41 >More info WT stem Base stem Base Original data GEO bulk
242 abi1 hypocotyl -0.41 >More info -0.66 >More info Ler hypocotyl hypocotyl Original data GEO bulk
243 eds16 whole leaf 7dpi 0.47 >More info 0.60 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
244 eds16 whole leaf 3dpi 0.49 >More info 0.58 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
245 dorn1-1 Root 100 mM ATP 30 min 0.54 >More info 0.52 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
246 Rsch CA 0.51 >More info 0.55 >More info Col CA Leaves Original data
247 tbf1-mock infiltration 0.62 >More info 0.44 >More info WT-mock infiltration water for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
248 long 17-degree- -0.43 >More info -0.63 >More info control long Original data GEO bulk
249 Protoplast Induced -0.35 >More info -0.71 >More info Uninduced Original data GEO bulk
250 CT101 ozone -0.71 >More info -0.34 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
251 ataf1-1 mutant Col-0 Un-inoculated 0.73 >More info 0.32 >More info WT Col-0 Un-inoculated Original data GEO bulk
252 seedling 12h after HZE WT -0.52 >More info -0.53 >More info seedling day 1 unirradiated WT 12h Original data
253 9 hr Hypoxia 1 hr recovery Total RNA -0.55 >More info -0.50 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
254 cdpk6-yfp -0.56 >More info -0.49 >More info Kan seedlings Original data GEO bulk
255 bio4-1 mutant watered00µM biotin leaves 0.66 >More info 0.39 >More info bio4-1 mutant leaves leaves Original data GEO bulk
256 Nicotinamide-69hr -0.60 >More info -0.45 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
257 9 hr Hypoxia 1 hr recovery IP RNA -0.54 >More info -0.51 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
258 leaf blade in D -0.50 >More info -0.55 >More info leaf blade in WL leaf blades Original data GEO bulk
259 4C 1h -0.44 >More info -0.61 >More info 4C 0h Original data GEO bulk
260 Shoot -Cs -0.44 >More info -0.61 >More info Control-shoot Original data GEO bulk
261 WT Bc inoculation 14h -0.69 >More info -0.36 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
262 dde2-2 9 hpi A. brassicicola -0.61 >More info -0.43 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
263 E.coli 0157 H7 7h -0.56 >More info -0.48 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
264 leaf rlt1-1rlt2-1 0.52 >More info 0.52 >More info leaf Col-0 leaf Original data GEO bulk
265 cat2-long-day 2d 0.62 >More info 0.42 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
266 Time-0 chr11-1chr17-1 0.51 >More info 0.53 >More info Time-0 Col-0 leaf explants Original data
267 Col-0 mbs1-1 HL 3h 0.59 >More info 0.45 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
268 Mature callus -0.50 >More info -0.54 >More info Young callus hypocotyls Original data GEO bulk
269 C24 ozone -0.69 >More info -0.35 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
270 AtMYB30-as 90-105 min Xanthomonas -0.51 >More info -0.53 >More info WT 90-105 min Xanthomonas Original data GEO bulk
271 Octopus overexpressor 35SDYG25 -0.55 >More info -0.49 >More info WS Original data GEO bulk
272 Nicotinamide-65hr -0.66 >More info -0.38 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
273 Col-0-avrB-6h -0.59 >More info -0.45 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
274 dor drought -0.47 >More info -0.57 >More info WT drought Original data GEO bulk
275 toc1-1-73hr -0.41 >More info -0.63 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
276 3x(p) -0.51 >More info -0.52 >More info 2x two week old seedlings Original data
277 Bur-0-3h IAA -0.57 >More info -0.46 >More info Bur-0h IAA whole plant Original data GEO bulk
278 dor control -0.67 >More info -0.36 >More info WT control Original data GEO bulk
279 HSP90 Reduced RNAi-A2 -0.55 >More info -0.48 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
280 6h +Pi 0.58 >More info 0.45 >More info 6h -Pi root Original data GEO bulk
281 Chitosan 3h Treatment -0.54 >More info -0.49 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
282 4h decapitation 0.41 >More info 0.62 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
283 RPL18 TuMV inoculated polysomal RNA -0.41 >More info -0.62 >More info mock inoculated polysomal RNA PO Original data GEO bulk
284 chito-tetramer -0.49 >More info -0.54 >More info Col Mock Original data GEO bulk
285 FLIGHT TAGESB plate6 ROOTS -0.33 >More info -0.70 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
286 AFB1 flg22 2h -0.60 >More info -0.42 >More info WT 0h Leaf tissue Original data GEO bulk
287 Botrytis cinerea 48h -0.57 >More info -0.45 >More info control 48h Original data GEO bulk
288 vte2-1 3d vernalization -0.55 >More info -0.47 >More info WT 3d vernalization Original data GEO bulk
289 anti-sense for AtAOX1a -0.66 >More info -0.36 >More info WT Original data GEO bulk
290 Polysomal RNA 35S:HF-RPL18 -0.68 >More info -0.34 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
291 Light 3day wt 0.57 >More info 0.45 >More info 0h wt Original data
292 cat2-long-day 4d 0.53 >More info 0.49 >More info Col0-LD4 transferred to air (400 ppm) for 4 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
293 Col whole leaf 3dpi -0.35 >More info -0.67 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
294 WT 6H Cold -0.44 >More info -0.58 >More info WT control Original data GEO bulk
295 myb61 xylem -0.37 >More info -0.65 >More info wt xylem xylem Original data GEO bulk
296 INA -0.45 >More info -0.57 >More info CK INA seedling Original data
297 WT-Dry -0.40 >More info -0.62 >More info WT-CK dehydration treatment 1h Original data
298 chito-octamer -0.51 >More info -0.50 >More info Col Mock Original data GEO bulk
299 anac017-1 H2O2 3h 0.59 >More info 0.42 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
300 Cold Stress 24 h (shoot) -0.52 >More info -0.49 >More info Stress mock 24 h (shoot) Original data Stress treatments
301 D2O -0.55 >More info -0.46 >More info H2O seedling Original data GEO bulk
302 ice1 6H Cold -0.49 >More info -0.52 >More info WT 6H Cold Original data GEO bulk
303 4d red light grown hmr-5 seedlings -0.47 >More info -0.54 >More info 4d red light grown WT(Col-0) seedlings Original data
304 46T-Dry -0.42 >More info -0.59 >More info WT-Dry dehydration treatment 1h Original data
305 A6 mutant -0.51 >More info -0.49 >More info WT rosette leaves Rosette leaves Original data GEO bulk
306 toc1-1-65hr -0.63 >More info -0.37 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
307 WT 30μM arsenate 8 hours. -0.55 >More info -0.45 >More info WT control (not supplemented). Original data
308 SCR-GR Time 1H Dex -0.39 >More info -0.61 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
309 protoplasts T1 [flg22] -0.45 >More info -0.55 >More info protoplasts T1 [CPK] mesophyll protoplasts Original data GEO bulk
310 Seedling KUA1-IOX est -0.43 >More info -0.57 >More info Seedling KUA1-IOX mock Original data
311 KO-nudx19 leaves -0.57 >More info -0.42 >More info WT leaves rosette leaves Original data
312 CMV-A2b mutant -0.64 >More info -0.35 >More info Mock-At Aerial tissues Original data GEO bulk
313 nia1nia2 -0.60 >More info -0.39 >More info Col-0 whole seedlings Original data GEO bulk
314 anac017-2 H2O2 3h 0.49 >More info 0.50 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
315 WT drought -0.40 >More info -0.59 >More info WT control All aerial tissue Original data GEO bulk
316 abi4-102 (I) -0.54 >More info -0.44 >More info Col (I) rosette Original data GEO bulk
317 irradiated leaf (WT 1d) -0.73 >More info -0.25 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
318 GO5; 0h switch to ambient CO2 concentrations; 0.68 >More info 0.30 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
319 msh1 albino -0.59 >More info -0.39 >More info WT aerial part Original data GEO bulk
320 npr1 sni1 ssn2 SA 0.63 >More info 0.35 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
321 Laer treat paclobutrazol (PAC) -0.50 >More info -0.48 >More info Laer Control leaf discs Original data GEO bulk
322 WT flg22 2h -0.56 >More info -0.42 >More info WT 0h Leaf tissue Original data GEO bulk
323 mkk1/mkk2 24h BTH rep -0.56 >More info -0.42 >More info Col-0 24h BTH rep Original data GEO bulk
324 Mutant ga1-5 0.47 >More info 0.51 >More info Ler-1 Original data Comparison of plant hormone related mutant
325 Mutant gh3.5-1D (AvrRpt2) -0.44 >More info -0.54 >More info Col-0 (AvrRpt2) Original data GEO bulk
326 mutant-line409 0.37 >More info 0.61 >More info WT-control whole plant Original data GEO bulk
327 A1-1 -0.37 >More info -0.61 >More info WT Original data GEO bulk
328 npr1-1 SA 0.52 >More info 0.45 >More info Col-0 SA complete seedling Original data
329 mbd6 mutant thaliana 10-day-old seedling -0.53 >More info -0.44 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
330 sid2-1 warm 0.53 >More info 0.44 >More info WT warm entire aerial part Original data GEO bulk
331 TaFLS overexpression line (OE2) 0.61 >More info 0.36 >More info Col-0 Rosette leaves Original data
332 Laer Flg22 2h -0.59 >More info -0.38 >More info Laer Control leaf discs Original data GEO bulk
333 IRP1-OE-Ctrl--root -0.50 >More info -0.47 >More info COL-0-Ctrl--root root Original data
334 Leafminer systemically damaged thaliana seedlings -0.55 >More info -0.42 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
335 petiole in D -0.53 >More info -0.44 >More info petiole in WL petioles Original data GEO bulk
336 Nicotinamide-73hr -0.57 >More info -0.40 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
337 ARR22-ox (t-zeatin 3 h) -0.52 >More info -0.45 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
338 Selenate (root) -0.42 >More info -0.55 >More info Ws (root) Original data GEO bulk
339 npr1-3 DCA 48h -0.38 >More info -0.59 >More info npr1-3 MOCK 48h Original data GEO bulk
340 nas4x leaves - Fe 0.47 >More info 0.50 >More info WT leaves - Fe Leaves Original data GEO bulk
341 oligomycin 1 h -0.45 >More info -0.52 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
342 WT+H2O2 -0.47 >More info -0.50 >More info WT H2O2 Original data GEO bulk
343 Dex-rga(delta17) 2h GA4 0.45 >More info 0.52 >More info Vector 4h GA4 shoots Original data GEO bulk
344 Root Selenate -0.42 >More info -0.55 >More info Root control 40 micromolar selenate Root Original data GEO bulk
345 Rose Bengal 0.5 uM -0.38 >More info -0.59 >More info Control RB and PER Rose Bengal Original data
346 SCR 24hr-S -0.42 >More info -0.55 >More info SCR 0hr endodermis Original data
347 Compost -0.56 >More info -0.40 >More info Perlite Compost Original data GEO bulk
348 Mutant ag-12(flower) -0.54 >More info -0.42 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
349 sfr6 drought 0.52 >More info 0.44 >More info WT drought All aerial tissue Original data GEO bulk
350 Senescing leaf -0.57 >More info -0.39 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
351 low CO2 + dark -0.53 >More info -0.43 >More info normal CO2 + light Original data GEO bulk
352 toc1-1-81hr -0.52 >More info -0.44 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
353 ANAC102 knock-out 0.45 >More info 0.51 >More info Col-0 Original data GEO bulk
354 atmyc2 cop1 Seedling BL -0.29 >More info -0.67 >More info WT Seedling BL Original data GEO bulk
355 bio4-1 mutant leaves -0.67 >More info -0.28 >More info WT leaves leaves Original data GEO bulk
356 penta Alternaria 3dpi -0.55 >More info -0.40 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
357 SCR 48hr-S -0.39 >More info -0.56 >More info SCR 0hr endodermis Original data
358 AAF-OX -0.53 >More info -0.42 >More info Col-0 Rosette leaf Original data GEO bulk
359 PstDC3000 48h -0.35 >More info -0.60 >More info WT untreated 48hr leaf Original data GEO bulk
360 IRP1-OE-Fe--shoot -0.56 >More info -0.38 >More info COL-0-Fe--shoot shoot Original data
361 safener treated -0.50 >More info -0.44 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
362 ani1 T0.5 0.43 >More info 0.51 >More info WT T0.5 root tissue Original data GEO bulk
363 Fenclorim 24hr -0.53 >More info -0.40 >More info Acetone 24hr root Original data GEO bulk
364 Salt Stress 24 h (root) -0.56 >More info -0.37 >More info Stress mock 24 h (root) Original data Stress treatments
365 WT 24H Cold -0.39 >More info -0.54 >More info WT control Original data GEO bulk
366 P.p 10.5hai -0.60 >More info -0.33 >More info At-Control roots Original data GEO bulk
367 oas-a1.1 Cd 24h -0.51 >More info -0.42 >More info Cd 24h root Shoot Original data GEO bulk
368 4C 1h -0.52 >More info -0.41 >More info 22C 1h Original data GEO bulk
369 sex1-3 -0.42 >More info -0.51 >More info Col-WT leaves Original data GEO bulk
370 max4 hypocotyl -0.41 >More info -0.52 >More info wt hypocotyl hypocotyl Original data GEO bulk
371 ACC 3 h -0.39 >More info -0.53 >More info Mock 3 h Original data Basic hormone treatment of seedlings
372 myb50 cork 0.39 >More info 0.53 >More info wt cork cork Original data GEO bulk
373 leaf blade in FRD -0.57 >More info -0.35 >More info leaf blade in WL leaf blades Original data GEO bulk
374 aphid infested -0.54 >More info -0.37 >More info control aphid infested Leaves Original data GEO bulk
375 Col-0 SA -0.56 >More info -0.35 >More info Col-0 Original data GEO bulk
376 WT +Pep2 10h -0.51 >More info -0.40 >More info WT untreated Pep2 Original data GEO bulk
377 TaFLS overexpression line (OE1) 0.68 >More info 0.23 >More info Col-0 Rosette leaves Original data
378 ABA DFPM -0.54 >More info -0.37 >More info control Original data GEO bulk
379 aphid infested -0.54 >More info -0.37 >More info CTR Original data GEO bulk
380 Nicotinamide-61hr -0.60 >More info -0.31 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
381 Laer Flg22+GA 2h -0.61 >More info -0.30 >More info Laer Control leaf discs Original data GEO bulk
382 M6PR transgenic leaf 100mM NaCl 0.29 >More info 0.62 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
383 irradiated leaf (cmt 5d) -0.56 >More info -0.34 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
384 erf104-ko Flg22 4h -0.36 >More info -0.54 >More info erf104-ko H2O 4h Original data GEO bulk
385 nhx5-1/nhx6 -0.40 >More info -0.50 >More info WT Rosette leaf Original data GEO bulk
386 shoots bhlh100/101 0uM Fe -0.59 >More info -0.31 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
387 WT NAA/flg 2h -0.60 >More info -0.30 >More info WT 0h Leaf tissue Original data GEO bulk
388 Nicotinamide-89hr -0.55 >More info -0.34 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
389 P.p 30hai -0.63 >More info -0.26 >More info At-Control roots Original data GEO bulk
390 MPK6 ox Shoot Hypoxia -0.57 >More info -0.32 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
391 Atss3 Light4 0.54 >More info 0.34 >More info Atss3 Dark0.5 Original data GEO bulk
392 miR393 flg22 1h -0.56 >More info -0.32 >More info WT 0h Leaf tissue Original data GEO bulk
393 Tsu -Fe 24h Shoots -0.54 >More info -0.34 >More info Tsu +Fe 24h Shoots Original data GEO bulk
394 irradiated leaf (cmt 1d) -0.64 >More info -0.24 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
395 pad2-PsmES4326-24hpi 0.51 >More info 0.37 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
396 P.p 2.5hai -0.52 >More info -0.36 >More info At-Control roots Original data GEO bulk
397 Col-0-3h IAA -0.61 >More info -0.27 >More info Col-0-0h IAA whole plant Original data GEO bulk
398 cov1 cov2 stem Top 0.51 >More info 0.37 >More info WT stem Top stem Top Original data GEO bulk
399 bri1-116 0.15 >More info 0.73 >More info Col seedling Original data GEO bulk
400 total mRNA eif3k -0.37 >More info -0.51 >More info total mRNA WT aerial part Original data GEO bulk
401 detached inflorescences 24h -0.38 >More info -0.50 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
402 AFB1 flg22 1h -0.58 >More info -0.30 >More info WT 0h Leaf tissue Original data GEO bulk
403 Bur-0-1h IAA -0.59 >More info -0.29 >More info Bur-0h IAA whole plant Original data GEO bulk
404 agb1 gpa1 -ABA LF -0.56 >More info -0.31 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
405 rdr6-15 0.53 >More info 0.34 >More info Col-0 Original data GEO bulk
406 WT flg22 1h -0.59 >More info -0.28 >More info WT 0h Leaf tissue Original data GEO bulk
407 tbf1-elf18 0.52 >More info 0.34 >More info WT-elf18 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
408 edr1 0 h powdery mildew -0.51 >More info -0.35 >More info Col-0 0 h powdery mildew Original data GEO bulk
409 vtc2-1 0.58 >More info 0.28 >More info Col-0 whole plant Original data GEO bulk
410 Shoot apex inflorescence (after bolting) 0.21 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
411 bak1-3 +Pep2 2h -0.35 >More info -0.51 >More info WT +Pep2 2h Pep2 Original data GEO bulk
412 Col-0 +lincomycin -0.32 >More info -0.53 >More info Col-0 -lincomycin Original data GEO bulk
413 sid2 0.57 >More info 0.28 >More info Col rosettes Original data GEO bulk
414 Pst-DC3000(avrRpm1)-4hpi -0.57 >More info -0.28 >More info Pst-DC3000-4hpi Original data GEO bulk
415 WT NAA/flg 1h -0.58 >More info -0.27 >More info WT 0h Leaf tissue Original data GEO bulk
416 Sepals stage15 -0.50 >More info -0.35 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
417 35S:RPS4 rrs1-11 T0 -0.22 >More info -0.63 >More info 35S:RPS4 T0 leaves Original data
418 gai Control -0.52 >More info -0.32 >More info Laer Control leaf discs Original data GEO bulk
419 mtf1-1 0.32 >More info 0.52 >More info Col0 root Original data
420 P.syringae vir 4 h (leaf) -0.61 >More info -0.23 >More info Mock 4 h (leaf) Original data Elicitor treatments
421 eds16 whole leaf 1dpi 0.24 >More info 0.60 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
422 albino Ds13-2198-1 0.52 >More info 0.31 >More info control Original data GEO bulk
423 Nicotinamide-93hr -0.51 >More info -0.32 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
424 tga2 tga5 tga6 ctrl 0.56 >More info 0.27 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) control Original data
425 sav1-1 shade -0.50 >More info -0.33 >More info Col-0 shade seedlings Original data GEO bulk
426 prmt5-5 0.57 >More info 0.26 >More info WT Col continuous light Aerial tissue Original data GEO bulk
427 Kas-1 -Fe 24h 0.24 >More info 0.59 >More info Kas-1 +Fe 24h roots Original data GEO bulk
428 Kas -Fe 24h Roots 0.24 >More info 0.59 >More info Kas +Fe 24h Roots Original data GEO bulk
429 Cd 24h root 0.51 >More info 0.31 >More info WT-Untreated Shoot Original data GEO bulk
430 C24-3h IAA -0.55 >More info -0.27 >More info C24-0h IAA whole plant Original data GEO bulk
431 cop1 Seedling BL -0.32 >More info -0.50 >More info WT Seedling BL Original data GEO bulk
432 Col PSTDC3000 24h -0.69 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
433 ORS1 induced -0.68 >More info -0.13 >More info mock-induced rosette leaves Original data GEO bulk
434 JMJ24-IBM1 double knockout 0.51 >More info 0.30 >More info WT Original data GEO bulk
435 sps1 0.50 >More info 0.31 >More info WT seedling Original data GEO bulk
436 Cs shoot 0.09 >More info 0.72 >More info control shoot Original data GEO bulk
437 Nicotinamide-85hr -0.51 >More info -0.29 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
438 del1-1 5dpi -0.67 >More info -0.13 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
439 Laer pretreat JA Flg22 0h 0.20 >More info 0.60 >More info Laer pretreat water control leaf discs Original data GEO bulk
440 PBZ -0.25 >More info -0.55 >More info none PBZ Rosette Original data GEO bulk
441 sim smr1 0.24 >More info 0.56 >More info WT seedling Original data GEO bulk
442 Chitin -0.50 >More info -0.29 >More info Col C Original data GEO bulk
443 spx1 spx2 complete -0.54 >More info -0.25 >More info WT complete seedlings Original data
444 bZIP1ko mutant N-Light- 0.52 >More info 0.27 >More info WT-sib N-Light- whole plant Original data GEO bulk
445 Laer Flg22+GA 1h -0.59 >More info -0.20 >More info Laer Control leaf discs Original data GEO bulk
446 G3P -0.28 >More info -0.51 >More info Mock distal leaves Original data GEO bulk
447 Light 0.5h steady-state -0.27 >More info -0.52 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
448 CDB1-Knockout 0.23 >More info 0.56 >More info WT Original data GEO bulk
449 P.p 6hai -0.58 >More info -0.21 >More info At-Control roots Original data GEO bulk
450 C24 UV1 0.62 >More info 0.16 >More info C24 mock UV seedling Original data
451 Light 0.5h polysome-bound -0.26 >More info -0.52 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
452 Te CA 0.25 >More info 0.53 >More info Col CA Leaves Original data
453 P. infestans 6 h (leaf) -0.62 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
454 Roots Cd 0.50 >More info 0.27 >More info Roots control Cd Root Original data GEO bulk
455 ape2 high light -0.54 >More info -0.23 >More info Ws-2 high light Original data GEO bulk
456 Mutant sav3-2 (SH) -0.23 >More info -0.54 >More info Col-0 (SH) Original data GEO bulk
457 flu dark 8hours/30 minute light -0.25 >More info -0.52 >More info col dark 8hours/30 minute light Original data GEO bulk
458 WT Atum 1h -0.00 >More info -0.77 >More info WT 0h Leaf tissue Original data GEO bulk
459 sav3-2 shade -0.23 >More info -0.54 >More info Col-0 shade seedlings Original data GEO bulk
460 nia1nia2noa1-2 -0.55 >More info -0.21 >More info Col-0 whole seedlings Original data GEO bulk
461 E.orontii Infection 3 day -0.18 >More info -0.58 >More info Uninfection 3 day Original data Elicitor treatments
462 polysome mRNA eif3k 0.00 >More info -0.76 >More info polysome mRNA WT aerial part Original data GEO bulk
463 seed germinating in countinuous light 24h SL 0.09 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
464 opr3 OPDA 2 h -0.12 >More info -0.64 >More info opr3 0 h Original data GEO bulk
465 penta Pst DC3000 12hpi -0.60 >More info -0.15 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
466 Col whole leaf 6hpi -0.51 >More info -0.24 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
467 opr3 OPDA 0.5 h -0.18 >More info -0.57 >More info opr3 0 h Original data GEO bulk
468 HairpinZ 4 h (leaf) -0.71 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
469 WT (Col) glucose 0.52 >More info 0.22 >More info WT (Col) glucose seedlings Original data GEO bulk
470 triploid female excess 0.17 >More info 0.56 >More info tetraploid Original data GEO bulk
471 pnp1-1 1wk -P -0.57 >More info -0.16 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
472 WT leaves - Fe -0.55 >More info -0.18 >More info WT leaves + Fe Leaves Original data GEO bulk
473 35:SUB1A -0.53 >More info -0.20 >More info WT whole seedling Original data GEO bulk
474 cat2-2; 8h switch to ambient CO2 concentrations; -0.55 >More info -0.17 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
475 21h-DC3000 avrRpm1 0.56 >More info 0.16 >More info 21h-DC3000 leaves Original data GEO bulk
476 sfr6 cold -0.17 >More info -0.55 >More info WT cold All aerial tissue Original data GEO bulk
477 Laer Flg22 1h -0.59 >More info -0.13 >More info Laer Control leaf discs Original data GEO bulk
478 petiole in FRD -0.52 >More info -0.20 >More info petiole in WL petioles Original data GEO bulk
479 Bur-0-30min IAA -0.53 >More info -0.19 >More info Bur-0h IAA whole plant Original data GEO bulk
480 calcicole ecotype Cal-0 -0.62 >More info -0.08 >More info Col-4 1 mM CaCl2 Original data GEO bulk
481 Col-0 DCA 6d -0.58 >More info -0.12 >More info Col-0 MOCK 6d Original data GEO bulk
482 sng1 -0.14 >More info -0.54 >More info WT aerial region Original data GEO bulk
483 sfr3 control -0.17 >More info -0.51 >More info WT control All aerial tissue Original data GEO bulk
484 hrpA fliC 7h -0.54 >More info -0.12 >More info Mock 7h hrpA fliC Original data GEO bulk
485 C24-1h IAA -0.55 >More info -0.10 >More info C24-0h IAA whole plant Original data GEO bulk
486 46T-CK -0.08 >More info -0.57 >More info WT-CK none Original data
487 opr3 JA 0.5 h -0.10 >More info -0.53 >More info opr3 0 h Original data GEO bulk
488 ago4-1 -0.51 >More info -0.10 >More info WT La-er whole plants Original data GEO bulk
489 FLIGHT TAGESB plate -0.51 >More info -0.10 >More info GROUND CONTROL TAGESB plate Original data
490 lug3 leaves 0.01 >More info 0.59 >More info WT-leaves matured rosette leaves Original data GEO bulk
491 Light 3day hml 0.56 >More info 0.03 >More info 0h hml Original data
492 Mutant sav3-2 (WL) -0.04 >More info -0.55 >More info Col-0 (WL) Original data GEO bulk
493 sav3-2 light -0.04 >More info -0.55 >More info Col-0 light seedlings Original data GEO bulk
494 IAA7mII over-expressor IAA Treated -0.13 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
495 Bay-0-30min IAA -0.51 >More info -0.04 >More info Bay-0-0h IAA whole plant Original data GEO bulk
496 Shoot P recovery -0.52 >More info -0.03 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
497 pmr5 -0.52 >More info -0.03 >More info Col-0 rosette Original data GEO bulk
498 FarRed Light 45min 0.03 >More info 0.52 >More info White Light 45min Original data Light treatments
499 tetraploid 0.03 >More info -0.58 >More info diploid Original data GEO bulk
500 vte2 leaves 120h LT -0.58 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
501 nas4x leaves + Fe -0.51 >More info -0.02 >More info WT leaves + Fe Leaves Original data GEO bulk
502 siliques WT hypoxia -0.51 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
503 ABA JA 24h 0.00 >More info -0.50 >More info EtOH 24h 24hr Original data GEO bulk
504 seedling 3h after HZE WT -0.51 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
505 Col-0 24hpi A. brassicicola -0.50 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
506 msh1 recA3 untreated 0.13 >More info -0.61 >More info WT untreated above-ground parts Original data GEO bulk
507 CCA1-ox 6am non-polysomal -0.05 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
508 Laer pretreat GA Flg22 1h -0.25 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
509 glk1 glk2 GLK1-GR +DEX 24h 0.53 >More info -0.08 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
510 gpa1 -ABA LF -0.52 >More info 0.12 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
511 0h hml -0.68 >More info 0.29 >More info 0h wt Original data
512 Laer Flg22(Agrobacterium) 2h 0.16 >More info -0.52 >More info Laer Control leaf discs Original data GEO bulk
513 ara1/2mut 0.16 >More info -0.50 >More info Col-3 Original data GEO bulk
514 WT +Pep2 2h -0.65 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
515 Heat shock optimum -0.41 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
516 Leafminer damaged seedlings -0.65 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
517 Col BTH -0.59 >More info 0.67 >More info Col rosettes Original data GEO bulk
518 WT roots - Fe -0.52 >More info 0.44 >More info WT roots + Fe Roots Original data GEO bulk
519 Col0-PsmES4326-24hpi -0.63 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
520 siliques AtHb1 control -0.51 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk