4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on npr1 sni1 SA
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "npr1 sni1 SA"  Help Download transcriptome of top 30
Score Experiment Correlation from
npr1 sni1 SA		 Correlation to
npr1 sni1 SA		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 npr1 sni1 SA 1.00 >More info 1.00 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
2 npr1 sni1 brca2a SA -0.85 >More info -0.85 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
3 camta3-2 0.68 >More info 0.79 >More info WT Original data GEO bulk
4 GA 0.69 >More info 0.75 >More info none GA Rosette Original data GEO bulk
5 Col-0 DCA 48h 0.66 >More info 0.77 >More info Col-0 MOCK 48h Original data GEO bulk
6 sid2-1 cold -0.66 >More info -0.76 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
7 npr1 sni1 ssn2 SA -0.81 >More info -0.59 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
8 bHLH122 ox -0.71 >More info -0.68 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
9 sid2 -0.58 >More info -0.80 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
10 cs26 short-day -0.69 >More info -0.68 >More info Leaves-WT-SD leaf Original data GEO bulk
11 ataf1-1 mutant Col-0 Bgh inoculated 0.73 >More info 0.64 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
12 35S:RPS4 eds1-2 2h -0.58 >More info -0.78 >More info 35S:RPS4 2h leaves Original data
13 Col-0 INA 48h 0.57 >More info 0.78 >More info Col-0 MOCK 48h Original data GEO bulk
14 4C 2h(SOIL) 0.55 >More info 0.79 >More info 4C 0h(SOIL) Original data GEO bulk
15 cpr5scv1 0.64 >More info 0.70 >More info WT(COL) Original data GEO bulk
16 rosette Light Wounded 0.57 >More info 0.77 >More info rosette Light Control Original data GEO bulk
17 Elevated CO2 AMPLE N DAY 0.60 >More info 0.74 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
18 Col ozone 3h 0.63 >More info 0.71 >More info Col clean-air 3h ozone Original data GEO bulk
19 A. thaliana-A. lyrata hybrid -0.61 >More info -0.72 >More info A. thaliana mature leaves before flowering Original data GEO bulk
20 seedlings protease IV 0.64 >More info 0.68 >More info seedlings nontreated control whole seedling Original data
21 downy mildew cotyledons late stage 0.67 >More info 0.65 >More info mock inoculated Cotyledons Original data GEO bulk
22 WT-SA 0.67 >More info 0.65 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
23 Col whole leaf 7dpi 0.65 >More info 0.66 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
24 UV Stress 24 h (shoot) 0.55 >More info 0.76 >More info Stress mock 24 h (shoot) Original data Stress treatments
25 CMV-WT 0.64 >More info 0.66 >More info Mock-At Aerial tissues Original data GEO bulk
26 eds16 whole leaf 5dpi -0.54 >More info -0.76 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
27 Rsch 8h 0.54 >More info 0.76 >More info Rsch CA Leaves Original data
28 Light 3day wt -0.69 >More info -0.61 >More info 0h wt Original data
29 35S::MBF1c 0.60 >More info 0.69 >More info control Original data GEO bulk
30 cpr5 0.57 >More info 0.72 >More info WT(COL) Original data GEO bulk
31 eds16 whole leaf 0h UI -0.50 >More info -0.79 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
32 INA 0.49 >More info 0.79 >More info CK INA seedling Original data
33 M6PR transgenic 0mM NaCl 0.58 >More info 0.68 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
34 1 h Light Total RNA -0.56 >More info -0.70 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
35 35S:RPS4 eds1-2 8h -0.67 >More info -0.59 >More info 35S:RPS4 8h leaves Original data
36 camta3-1 0.57 >More info 0.69 >More info WT Original data GEO bulk
37 aba1 hypocotyl 0.59 >More info 0.66 >More info Ler hypocotyl hypocotyl Original data GEO bulk
38 Mutant siz1-3 (Drought) 0.63 >More info 0.62 >More info Col-0 (Drought) Original data GEO bulk
39 siz1-3 drought 0.63 >More info 0.62 >More info Col-0 drought Original data GEO bulk
40 Mutant NahG(leaf) -0.53 >More info -0.72 >More info Col-0 (leaf) Original data GEO bulk
41 WT-NOCO2 INFECTED 0.68 >More info 0.56 >More info WT-MOCK Original data GEO bulk
42 35S:RPS4 eds1-2 24h -0.67 >More info -0.57 >More info 35S:RPS4 24h leaves Original data
43 Cor hrpS 10h 0.70 >More info 0.54 >More info Mock 10h Cor hrpS Original data GEO bulk
44 eds16 whole leaf 7dpi -0.52 >More info -0.72 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
45 1 h Light IP RNA -0.53 >More info -0.70 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
46 rosette Dark Wounded 0.54 >More info 0.69 >More info rosette Dark Control Original data GEO bulk
47 Atss3 Light4 -0.63 >More info -0.60 >More info Atss3 Dark0.5 Original data GEO bulk
48 anac017-2 AntimycinA 3h -0.59 >More info -0.64 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
49 +1.6 mM Tween 20 1 h. 0.58 >More info 0.65 >More info +distilled water 1 h. Original data GEO bulk
50 mkk1/mkk2 control rep 0.61 >More info 0.62 >More info Col-0 Time 0 rep Original data GEO bulk
51 Cycloheximide 3 h 0.60 >More info 0.62 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
52 bZIP1ko mutant N+Light- 0.61 >More info 0.61 >More info WT-sib N+Light- whole plant Original data GEO bulk
53 WT flg22 2h 0.61 >More info 0.61 >More info WT 0h Leaf tissue Original data GEO bulk
54 camta1-2 0.49 >More info 0.73 >More info Col-0-WT Original data GEO bulk
55 Cd 24h root -0.70 >More info -0.51 >More info WT-Untreated Shoot Original data GEO bulk
56 Leaf wounded 0.52 >More info 0.69 >More info Leaf control vegetative leaf Original data GEO bulk
57 WT+chitooctaose 0.56 >More info 0.64 >More info WT+water chitooctaose seedlings Original data GEO bulk
58 vtc2 (I) 0.60 >More info 0.60 >More info Col (I) rosette Original data GEO bulk
59 efr-1 +elf18 10h -0.59 >More info -0.61 >More info WT +elf18 10h elf18 Original data GEO bulk
60 FLIGHT TAGESB plate6 ROOTS 0.50 >More info 0.70 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
61 Elevated CO2 AMPLE N NIGHT 0.55 >More info 0.64 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
62 camta1/3 warm 0.51 >More info 0.68 >More info WT warm entire aerial part Original data GEO bulk
63 cpr5npr1svi1 0.53 >More info 0.66 >More info WT(COL) Original data GEO bulk
64 cpr5 0.52 >More info 0.67 >More info WT seedling Original data GEO bulk
65 GST 4 h (leaf) 0.54 >More info 0.65 >More info Mock 4 h (leaf) Original data Elicitor treatments
66 Col(gl) 0mM NaCl 0.51 >More info 0.67 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
67 Col BTH 0.51 >More info 0.67 >More info Col rosettes Original data GEO bulk
68 Col(gl) leaf 0mM NaCl 0.51 >More info 0.67 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
69 edr1 36 h powdery mildew 0.57 >More info 0.61 >More info Col-0 36 h powdery mildew Original data GEO bulk
70 edr1 18 h powdery mildew 0.59 >More info 0.59 >More info Col-0 18 h powdery mildew Original data GEO bulk
71 WOX1-1 0.59 >More info 0.58 >More info Col-0 aerial part Original data
72 Col-0 INA 6d 0.45 >More info 0.72 >More info Col-0 MOCK 6d Original data GEO bulk
73 Laer pretreat GA Flg22 1h 0.46 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
74 WT powdery mildew 0.61 >More info 0.55 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
75 Col0-PsmES4326-24hpi 0.55 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
76 pepr1-1 Pepr2-3 +Pep2 2h -0.59 >More info -0.57 >More info WT +Pep2 2h Pep2 Original data GEO bulk
77 cs26 long day 0.59 >More info 0.57 >More info Leaves-WT-LD leaf Original data GEO bulk
78 aba3-1 0.51 >More info 0.64 >More info wt Original data GEO bulk
79 WT cold 0.60 >More info 0.55 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
80 tt4 0.53 >More info 0.62 >More info Col-0 aerial part Original data
81 abi4 vtc2 (I) 0.55 >More info 0.60 >More info Col (I) rosette Original data GEO bulk
82 M6PR transgenic leaf 0mM NaCl 0.43 >More info 0.72 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
83 WT-Dry 0.45 >More info 0.70 >More info WT-CK dehydration treatment 1h Original data
84 WT 3h -P 0.55 >More info 0.59 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
85 WT flg22 1h 0.61 >More info 0.53 >More info WT 0h Leaf tissue Original data GEO bulk
86 Col whole leaf 5dpi 0.52 >More info 0.62 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
87 Light 0.49 >More info 0.65 >More info Control Original data GEO bulk
88 myb61 xylem 0.43 >More info 0.71 >More info wt xylem xylem Original data GEO bulk
89 chito-octamer 0.56 >More info 0.57 >More info Col Mock Original data GEO bulk
90 cpr5npr1 0.56 >More info 0.57 >More info WT(COL) Original data GEO bulk
91 ORS1 induced 0.61 >More info 0.51 >More info mock-induced rosette leaves Original data GEO bulk
92 SOS1 0mM NaCl 0.56 >More info 0.56 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
93 WT NAA/flg 1h 0.61 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
94 Laer Flg22+GA 1h 0.62 >More info 0.50 >More info Laer Control leaf discs Original data GEO bulk
95 WT chitooctaose 0.55 >More info 0.57 >More info WT water Original data GEO bulk
96 seedlings-week-old RECA1-overexpressing
transgenic		 0.53 >More info 0.59 >More info seedlings-week-old Col-0 seedlings Original data
97 Cor 10h 0.63 >More info 0.49 >More info Mock 10h Cor Original data GEO bulk
98 Selenate (root) 0.48 >More info 0.64 >More info Ws (root) Original data GEO bulk
99 eds16 whole leaf 3dpi -0.47 >More info -0.65 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
100 camta2/3 warm 0.48 >More info 0.64 >More info WT warm entire aerial part Original data GEO bulk
101 Root Selenate 0.48 >More info 0.64 >More info Root control 40 micromolar selenate Root Original data GEO bulk
102 GST NPP1 4 h (leaf) 0.60 >More info 0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
103 Cor 24h 0.62 >More info 0.49 >More info Mock 24h Cor Original data GEO bulk
104 OE WRKY63.3 high light 0.53 >More info 0.58 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
105 Col-Luc WT 3h antimycin A 0.57 >More info 0.54 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
106 E.orontii Infection 3 day 0.35 >More info 0.76 >More info Uninfection 3 day Original data Elicitor treatments
107 Protoplast Induced 0.47 >More info 0.64 >More info Uninduced Original data GEO bulk
108 WT 3H Cold 0.42 >More info 0.69 >More info WT control Original data GEO bulk
109 npr1-1 SA -0.62 >More info -0.48 >More info Col-0 SA complete seedling Original data
110 miR393 flg22 1h 0.56 >More info 0.54 >More info WT 0h Leaf tissue Original data GEO bulk
111 ein5-1 ski2-3 0.58 >More info 0.52 >More info Col-0 aerial tissue Original data
112 AFB1 flg22 2h 0.56 >More info 0.54 >More info WT 0h Leaf tissue Original data GEO bulk
113 pap1-D 0.58 >More info 0.52 >More info Col-0 aerial part Original data
114 WT 6H Cold 0.51 >More info 0.59 >More info WT control Original data GEO bulk
115 oas-a1.1 shoot -0.63 >More info -0.47 >More info WT-Untreated Shoot Original data GEO bulk
116 atmospheric CO2 low Mg shoot 0.63 >More info 0.47 >More info atmospheric CO2 normal Mg shoot Shoot Original data
117 Col-0 (t-zeatin 3 h) -0.49 >More info -0.61 >More info Col-0 Original data Cytokinin treatment of seedlings
118 Heat shock optimum 0.45 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
119 NahG -0.44 >More info -0.66 >More info Col-0 Leaves Original data GEO bulk
120 Leafminer damaged seedlings 0.53 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
121 smg7b-1 0.55 >More info 0.54 >More info WT whole plant Original data GEO bulk
122 npr1-3 MOCK 48h -0.62 >More info -0.47 >More info Col-0 MOCK 48h Original data GEO bulk
123 chito-tetramer 0.52 >More info 0.56 >More info Col Mock Original data GEO bulk
124 toc1-1-49hr 0.60 >More info 0.48 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
125 ceh1 mutant 0.53 >More info 0.55 >More info Parent line Original data
126 bio4-1 mutant leaves 0.61 >More info 0.47 >More info WT leaves leaves Original data GEO bulk
127 Bur-0-3h IAA 0.63 >More info 0.45 >More info Bur-0h IAA whole plant Original data GEO bulk
128 sid2-PsmES4326-24hpi -0.54 >More info -0.54 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
129 HopZ1a treated 0.59 >More info 0.49 >More info col Original data GEO bulk
130 leaf blade in D 0.41 >More info 0.67 >More info leaf blade in WL leaf blades Original data GEO bulk
131 PstDC3000 48h 0.42 >More info 0.66 >More info WT untreated 48hr leaf Original data GEO bulk
132 Te 8h 0.45 >More info 0.63 >More info Te CA Leaves Original data
133 S15-118 0.52 >More info 0.55 >More info wt Original data GEO bulk
134 tbf1-mock infiltration -0.56 >More info -0.51 >More info WT-mock infiltration water for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
135 phyB mutant 22C 10hrs -0.33 >More info -0.74 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
136 wavy 0.42 >More info 0.65 >More info WT Original data GEO bulk
137 flu dark 8hours/30 minute light 0.35 >More info 0.72 >More info col dark 8hours/30 minute light Original data GEO bulk
138 4C 1h 0.36 >More info 0.71 >More info 4C 0h Original data GEO bulk
139 wrky33 Bc inoculation 14h 0.69 >More info 0.37 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
140 vtc1 (II) 0.55 >More info 0.51 >More info Col (II) rosette Original data GEO bulk
141 npr1-PsmES4326-24hpi -0.54 >More info -0.52 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
142 AFB1 flg22 1h 0.55 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
143 eds16 whole leaf 6hpi -0.45 >More info -0.61 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
144 TNT-seedlings 0.38 >More info 0.68 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
145 camta1/2/3 warm 0.49 >More info 0.57 >More info WT warm entire aerial part Original data GEO bulk
146 abi1 hypocotyl 0.39 >More info 0.67 >More info Ler hypocotyl hypocotyl Original data GEO bulk
147 CT101 ozone 0.62 >More info 0.43 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
148 pmr5 pmr6 0.52 >More info 0.53 >More info Col-0 Original data GEO bulk
149 HARAP hypoxic 0.52 >More info 0.53 >More info hypoxic hypoxia Original data GEO bulk
150 Flagellin 4 h (leaf) 0.55 >More info 0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
151 del1-1 mutant 5d uninfected 0.58 >More info 0.47 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
152 Leafminer locally damaged thaliana seedlings 0.53 >More info 0.51 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
153 CAX1/CAX3 mutant 0.59 >More info 0.45 >More info Col whole plant Original data GEO bulk
154 Lipopolysaccaride4 h (leaf) 0.50 >More info 0.54 >More info Mock 4 h (leaf) Original data Elicitor treatments
155 flu over-tAPX 0.50 >More info 0.54 >More info WT Col Original data GEO bulk
156 mkk2 24h BTH rep 0.40 >More info 0.64 >More info Col-0 24h BTH rep Original data GEO bulk
157 petiole in FRD 0.41 >More info 0.63 >More info petiole in WL petioles Original data GEO bulk
158 low R/FR JA spray 0.44 >More info 0.60 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
159 WT 2-4h Xanthomonas 0.47 >More info 0.57 >More info WT T0 Original data GEO bulk
160 46T-Dry 0.44 >More info 0.60 >More info WT-Dry dehydration treatment 1h Original data
161 Col-0 DCA 6d 0.50 >More info 0.53 >More info Col-0 MOCK 6d Original data GEO bulk
162 Leaf systemic 0.63 >More info 0.40 >More info Leaf control vegetative leaf Original data GEO bulk
163 oxt6 mutant -0.55 >More info -0.48 >More info WT Original data GEO bulk
164 BLM+INA 0.52 >More info 0.51 >More info CK BLM and INA seedling Original data
165 coi1-16 ein2 sid2 ctrl -0.62 >More info -0.41 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
166 WT AntimycinA 3h 0.52 >More info 0.51 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
167 P.syringae AvrRpt2 4 h (leaf) 0.44 >More info 0.59 >More info Mock 4 h (leaf) Original data Elicitor treatments
168 aba2 1% sucrose 12-day-old 0.42 >More info 0.61 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
169 MYB12OX/tt4 0.45 >More info 0.58 >More info Col-0 aerial part Original data
170 Laer Flg22 1h 0.60 >More info 0.42 >More info Laer Control leaf discs Original data GEO bulk
171 oas-a1.1 Cd 24h 0.59 >More info 0.43 >More info Cd 24h root Shoot Original data GEO bulk
172 Te ozone 0.65 >More info 0.37 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
173 col-5 hrpA 12h 0.50 >More info 0.52 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
174 HSP90 Reduced RNAi-B1 0.56 >More info 0.46 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
175 col-5 DC3000 12h 0.55 >More info 0.47 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
176 sid2-2 mock -0.42 >More info -0.60 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
177 rsa3-1 Na 24h 0.43 >More info 0.59 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
178 max4 hypocotyl 0.49 >More info 0.53 >More info wt hypocotyl hypocotyl Original data GEO bulk
179 Col-0 shade 0.37 >More info 0.65 >More info Col-0 light seedlings Original data GEO bulk
180 Col 8h 0.46 >More info 0.56 >More info Col CA Leaves Original data
181 Chitin 0.56 >More info 0.45 >More info Col C Original data GEO bulk
182 flu 0.54 >More info 0.47 >More info WT Col Original data GEO bulk
183 pho1 0.53 >More info 0.48 >More info Col2WT Original data GEO bulk
184 pad4-PsmES4326-24hpi -0.50 >More info -0.51 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
185 P.p 10.5hai 0.54 >More info 0.47 >More info At-Control roots Original data GEO bulk
186 SA 0.54 >More info 0.47 >More info WT mock Whole seedling Original data GEO bulk
187 S58-2 0.56 >More info 0.45 >More info wt Original data GEO bulk
188 Bur-0-1h IAA 0.60 >More info 0.41 >More info Bur-0h IAA whole plant Original data GEO bulk
189 CMV-A2b mutant 0.48 >More info 0.53 >More info Mock-At Aerial tissues Original data GEO bulk
190 WT +elf18 10h 0.47 >More info 0.54 >More info WT untreated elf18 Original data GEO bulk
191 OE WRKY63.3 0.43 >More info 0.58 >More info OE WRKY40.4 none leaf Original data GEO bulk
192 npr1 0.25 >More info 0.76 >More info WT(COL) Original data GEO bulk
193 CLO 4mM 0.62 >More info 0.38 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
194 P.p 2.5hai 0.53 >More info 0.47 >More info At-Control roots Original data GEO bulk
195 upf3 0.58 >More info 0.42 >More info WT whole plant Original data GEO bulk
196 Wounding Stress3 h (shoot) 0.50 >More info 0.50 >More info Stress mock 3 h (shoot) Original data Stress treatments
197 HSP90 Reduced RNAi-A2 0.59 >More info 0.41 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
198 atr mock 0.64 >More info 0.36 >More info WT mock shoot apical meristem Original data
199 RRE2 -0.39 >More info -0.61 >More info Col C Original data GEO bulk
200 1h +Pi -0.43 >More info -0.57 >More info 1h -Pi root Original data GEO bulk
201 3x(m) 0.44 >More info 0.56 >More info 2x two week old seedlings Original data
202 P.p 6hai 0.54 >More info 0.45 >More info At-Control roots Original data GEO bulk
203 AvrRpt2 Col-0 6hpi 0.63 >More info 0.36 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
204 gai MeJA 1h -0.62 >More info -0.37 >More info Laer MeJA 1h leaf discs Original data GEO bulk
205 ein2-1 9 hpi A. brassicicola 0.56 >More info 0.43 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
206 rosette leaves fdh 0.55 >More info 0.44 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
207 atmospheric CO2 high Mg shoot 0.62 >More info 0.37 >More info atmospheric CO2 normal Mg shoot Shoot Original data
208 penta Pst DC3000 12hpi 0.67 >More info 0.32 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
209 Col whole leaf 1dpi -0.42 >More info -0.57 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
210 low CO2 + light 0.43 >More info 0.56 >More info normal CO2 + light Original data GEO bulk
211 dense canopy 0.46 >More info 0.53 >More info single (control) petiole Original data GEO bulk
212 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.58 >More info 0.40 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
213 21h-DC3000 avrRpm1 -0.50 >More info -0.48 >More info 21h-DC3000 leaves Original data GEO bulk
214 sid2-2 safener -0.40 >More info -0.58 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
215 OE WRKY40.4 -0.46 >More info -0.52 >More info OE WRKY40.4 none leaf Original data GEO bulk
216 axr1 hypocotyl 0.47 >More info 0.51 >More info wt hypocotyl hypocotyl Original data GEO bulk
217 myb61 cork 0.39 >More info 0.59 >More info wt cork cork Original data GEO bulk
218 del1-1 5dpi 0.55 >More info 0.42 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
219 DFPM 0.58 >More info 0.39 >More info control Original data GEO bulk
220 WUSp cells 0.54 >More info 0.43 >More info Protoplast Induced Original data GEO bulk
221 Col leaf 100mM NaCl 0.40 >More info 0.57 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
222 Col leaf 100mM NaCl 0.40 >More info 0.57 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
223 GiantCell Root -0.47 >More info -0.50 >More info Control Root laser captured giant cells Original data GEO bulk
224 Col 100mM NaCl 0.40 >More info 0.57 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
225 Col-0-3h IAA 0.59 >More info 0.37 >More info Col-0-0h IAA whole plant Original data GEO bulk
226 35:SUB1A 0.57 >More info 0.39 >More info WT whole seedling Original data GEO bulk
227 coi1-16 ein2 sid2 ozone 0.64 >More info 0.32 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
228 MYB12OX 0.59 >More info 0.37 >More info Col-0 aerial part Original data
229 leaf blade in FRD 0.38 >More info 0.58 >More info leaf blade in WL leaf blades Original data GEO bulk
230 Leafminer systemically damaged thaliana seedlings 0.44 >More info 0.52 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
231 rGRF 0.33 >More info 0.63 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
232 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.57 >More info 0.38 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
233 WT NAA/flg 2h 0.53 >More info 0.42 >More info WT 0h Leaf tissue Original data GEO bulk
234 ataf1-1 mutant Col-0 Un-inoculated -0.69 >More info -0.26 >More info WT Col-0 Un-inoculated Original data GEO bulk
235 P.p 30hai 0.51 >More info 0.44 >More info At-Control roots Original data GEO bulk
236 IMI 4mM 0.60 >More info 0.35 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
237 eds16 whole leaf 1dpi -0.41 >More info -0.54 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
238 petiole in D 0.31 >More info 0.64 >More info petiole in WL petioles Original data GEO bulk
239 OH1 0.38 >More info 0.57 >More info Col-0 leaves Original data GEO bulk
240 Bur-0-30min IAA 0.56 >More info 0.38 >More info Bur-0h IAA whole plant Original data GEO bulk
241 stn7-1 -0.59 >More info -0.35 >More info Col-0 rosette leaves Original data GEO bulk
242 LTN008-2 aza-dc 0.57 >More info 0.37 >More info LTN012-2 Mock Original data
243 Elevated CO2 expanding leaf 0.53 >More info 0.41 >More info Ambient CO2 expanding leaf expanding leaf Original data
244 IRP1-OE-Ctrl--root 0.52 >More info 0.42 >More info COL-0-Ctrl--root root Original data
245 toc1-1-53hr 0.58 >More info 0.36 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
246 Ws leaf 100mM NaCl 0.37 >More info 0.57 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
247 Ws 100mM NaCl 0.37 >More info 0.57 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
248 low CO2 + dark 0.36 >More info 0.58 >More info normal CO2 + light Original data GEO bulk
249 pmr5 0.44 >More info 0.50 >More info Col-0 Original data GEO bulk
250 sid2-2 24hpi A. brassicicola -0.44 >More info -0.50 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
251 Octopus overexpressor 35SDYG25 0.40 >More info 0.53 >More info WS Original data GEO bulk
252 oligomycin 4 h 0.52 >More info 0.41 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
253 smg5-2 0.52 >More info 0.41 >More info WT whole plant Original data GEO bulk
254 WT in -N 0.53 >More info 0.39 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
255 erf104-ko Flg22 4h 0.55 >More info 0.37 >More info erf104-ko H2O 4h Original data GEO bulk
256 coi1-2 0.37 >More info 0.55 >More info Col-0 mock Whole seedling Original data GEO bulk
257 Col-0 ozone 0.57 >More info 0.35 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
258 9 hr Hypoxia 1 hr recovery IP RNA 0.57 >More info 0.35 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
259 TA induced 0.41 >More info 0.51 >More info Methanol TA Suspension cells Original data GEO bulk
260 opr3 OPDA 0.5 h 0.22 >More info 0.70 >More info opr3 0 h Original data GEO bulk
261 Col-0 under 4 days salt 0.52 >More info 0.39 >More info Col-0 under control 4 days salt treatment rosette Original data
262 atgsnor1-1 -0.63 >More info -0.28 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
263 cat2-long-day 2d -0.56 >More info -0.35 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
264 sni1 0.35 >More info 0.56 >More info WT Original data GEO bulk
265 Col-0 35S:MBS1 HL 3h -0.38 >More info -0.53 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
266 shl-2 Pool 0.22 >More info 0.69 >More info Ler Pool seedling Original data GEO bulk
267 pap1-D/tt4 0.41 >More info 0.50 >More info Col-0 aerial part Original data
268 cov1 cov2 stem Base 0.56 >More info 0.34 >More info WT stem Base stem Base Original data GEO bulk
269 Laer Flg22+GA 2h 0.56 >More info 0.34 >More info Laer Control leaf discs Original data GEO bulk
270 hrcC 0.50 >More info 0.40 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
271 2hr transitory KNO3 PrR cell 0.50 >More info 0.40 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
272 WT +elf18 2h 0.40 >More info 0.50 >More info WT untreated elf18 Original data GEO bulk
273 opr3 JA 0.5 h 0.23 >More info 0.67 >More info opr3 0 h Original data GEO bulk
274 Laer pretreat GA Flg22 0h 0.59 >More info 0.31 >More info Laer pretreat water control leaf discs Original data GEO bulk
275 C24 ozone 0.59 >More info 0.31 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
276 Mutant siz1-3 0.39 >More info 0.50 >More info Col-0 Original data GEO bulk
277 OsSAP11 expressing -0.35 >More info -0.54 >More info WT seedlings Original data GEO bulk
278 siz1-3 control 0.39 >More info 0.50 >More info Col-0 control Original data GEO bulk
279 SA 4mM 0.59 >More info 0.30 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
280 seedlings by volatiles from leafminer damaged
Lima bean 24h		 -0.53 >More info -0.35 >More info seedlings by volatiles from healthy Lima bean 24h leaves Original data GEO bulk
281 Shoot -K 0.53 >More info 0.35 >More info Control-shoot Original data GEO bulk
282 K starvation (shoot) 0.53 >More info 0.35 >More info Ws (shoot) Original data GEO bulk
283 Methyl Jasmonate 1 h 0.37 >More info 0.51 >More info Mock 1 h Original data Basic hormone treatment of seedlings
284 tunicamycin -0.25 >More info -0.63 >More info DMF Original data GEO bulk
285 seedling h S Exp -0.37 >More info -0.51 >More info seedling -S Exp seedling Original data
286 WT Bc inoculation 14h 0.58 >More info 0.30 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
287 IXB induced 0.30 >More info 0.58 >More info Methanol IXB Suspension cells Original data GEO bulk
288 Elevated CO2 fully expanded leaf 0.55 >More info 0.32 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
289 WT seedlings MV 0.55 >More info 0.32 >More info WT seedlings control Seedlings Original data GEO bulk
290 CMP 4hr 0.51 >More info 0.36 >More info Acetone 4hr root Original data GEO bulk
291 gai Control 0.57 >More info 0.30 >More info Laer Control leaf discs Original data GEO bulk
292 IAA7mII over-expressor IAA Treated 0.18 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
293 CMP 24hr 0.52 >More info 0.34 >More info Acetone 24hr root Original data GEO bulk
294 SLWF infested 0.54 >More info 0.32 >More info SLWF uninfested rosette tissue Original data GEO bulk
295 npr1-3 DCA 48h 0.36 >More info 0.50 >More info npr1-3 MOCK 48h Original data GEO bulk
296 rosette leaves lcr 0.35 >More info 0.51 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
297 root callus inducing medium 24h -0.54 >More info -0.31 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
298 irradiated leaf (cmt 5d) 0.51 >More info 0.33 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
299 HSP90 Reduced RNAi-A3 0.54 >More info 0.30 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
300 P35S:rGRF3 0.50 >More info 0.34 >More info WS Original data GEO bulk
301 toc1-1-57hr 0.50 >More info 0.34 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
302 Seedling-HeatStressed TOTALmRNA 0.51 >More info 0.32 >More info Seedling-control TOTALmRNA seedling Original data
303 Salicylic Acid 3 h 0.30 >More info 0.53 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
304 bak1-3 +Pep2 10h 0.57 >More info 0.26 >More info WT +Pep2 10h Pep2 Original data GEO bulk
305 C24 UV1 -0.58 >More info -0.25 >More info C24 mock UV seedling Original data
306 Night Time Treatment -0.24 >More info -0.59 >More info Night Time Control 1hr white light pulse aerial rosette Original data
307 Col-0-1h IAA 0.53 >More info 0.29 >More info Col-0-0h IAA whole plant Original data GEO bulk
308 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.56 >More info -0.26 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
309 6h volatiles Sp. HRO-C48 0.30 >More info 0.52 >More info 6h untreated whole seedling Original data GEO bulk
310 upf1 0.50 >More info 0.31 >More info WT whole plant Original data GEO bulk
311 root callus inducing medium 48 h -0.52 >More info -0.29 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
312 Ambient CO2 LIMITING N DAY 0.53 >More info 0.28 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
313 Col in Pi deficiency medium 0.26 >More info 0.55 >More info Col in control medium root Original data GEO bulk
314 Col-0 37C 0.59 >More info 0.22 >More info Col-0 22C Original data GEO bulk
315 Prohexadione 12 h 0.24 >More info 0.57 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
316 siliques AtHb1 control 0.28 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
317 8hr-pH4.5 0.51 >More info 0.28 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
318 irradiated leaf (WT 1d) 0.55 >More info 0.24 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
319 9 hr Hypoxia 1 hr recovery Total RNA 0.50 >More info 0.29 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
320 total mRNA eif3k 0.28 >More info 0.51 >More info total mRNA WT aerial part Original data GEO bulk
321 spx1 spx2 no Pi 0.51 >More info 0.27 >More info WT no Pi seedlings Original data
322 calcicole ecotype Cal-0 0.58 >More info 0.20 >More info Col-4 1 mM CaCl2 Original data GEO bulk
323 Bay-0-30min IAA 0.58 >More info 0.20 >More info Bay-0-0h IAA whole plant Original data GEO bulk
324 triploid female excess -0.18 >More info -0.60 >More info tetraploid Original data GEO bulk
325 toc1-1-77hr 0.55 >More info 0.22 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
326 Compost 0.51 >More info 0.26 >More info Perlite Compost Original data GEO bulk
327 Col-0 DEX Shade 0.27 >More info 0.50 >More info Col-0 DEX WL seedlings Original data
328 4h decapitation -0.19 >More info -0.58 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
329 Shoot dark control 7h 0.14 >More info 0.63 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
330 12h volatiles Sm. R3089 0.17 >More info 0.60 >More info 12h untreated whole seedling Original data GEO bulk
331 dorn1-1 Root 100 mM ATP 30 min -0.26 >More info -0.51 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
332 shoot-10 μM DEX- 6 hr 0.27 >More info 0.50 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
333 35:SUB1C 0.53 >More info 0.23 >More info WT whole seedling Original data GEO bulk
334 Laer Flg22 2h 0.54 >More info 0.22 >More info Laer Control leaf discs Original data GEO bulk
335 Col-0 +lincomycin 0.23 >More info 0.53 >More info Col-0 -lincomycin Original data GEO bulk
336 toc1-1-65hr 0.53 >More info 0.22 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
337 Red Light 4 h 0.20 >More info 0.55 >More info White Light 4 h Original data Light treatments
338 HARAP aerobic -0.24 >More info -0.51 >More info WT aerobic aerobic Original data GEO bulk
339 seedlings +5AC 0.54 >More info 0.20 >More info control seedlings 10-day old whole seedling Original data GEO bulk
340 DC3000 24h 0.60 >More info 0.14 >More info Mock 24h DC3000 Original data GEO bulk
341 OsRLCK253 expressing -0.23 >More info -0.51 >More info WT seedlings Original data GEO bulk
342 Kas-1 -Fe 24h -0.19 >More info -0.55 >More info Kas-1 +Fe 24h roots Original data GEO bulk
343 Kas -Fe 24h Roots -0.19 >More info -0.55 >More info Kas +Fe 24h Roots Original data GEO bulk
344 vtc2-1 -0.56 >More info -0.17 >More info Col-0 whole plant Original data GEO bulk
345 Shoot P recovery 0.54 >More info 0.19 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
346 atr zebularine 0.52 >More info 0.21 >More info WT zebularine shoot apical meristem Original data
347 CDB1-Knockout -0.14 >More info -0.59 >More info WT Original data GEO bulk
348 sex1-3 0.18 >More info 0.54 >More info Col-WT leaves Original data GEO bulk
349 46T-CK 0.03 >More info 0.67 >More info WT-CK none Original data
350 bZIP1ko mutant N+Light+ 0.50 >More info 0.20 >More info WT-sib N+Light+ whole plant Original data GEO bulk
351 IRP1-OE-Fe--shoot 0.50 >More info 0.20 >More info COL-0-Fe--shoot shoot Original data
352 Red/FR Light 4 h 0.20 >More info 0.50 >More info FarRed Light 4 h Original data Light treatments
353 Pseudomonas 0.13 >More info 0.56 >More info Control pseudomonas treated whole seedling Original data GEO bulk
354 seedling 24h after Gamma atm-1 -0.13 >More info -0.55 >More info seedling day 2 unirradiated atm-1 24h Original data
355 Laer pretreat JA Flg22 0h -0.06 >More info -0.62 >More info Laer pretreat water control leaf discs Original data GEO bulk
356 bri1-116 -0.05 >More info 0.73 >More info Col seedling Original data GEO bulk
357 cat2-hCO2 -0.50 >More info -0.16 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
358 6h volatiles Sm. R3089 0.16 >More info 0.50 >More info 6h untreated whole seedling Original data GEO bulk
359 Shoot submergence 24h 0.10 >More info 0.55 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
360 -Sulfate 24 h 0.09 >More info 0.55 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
361 EBE-XVE +estradiol -0.06 >More info -0.55 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
362 FarRed Light 4 h -0.11 >More info -0.50 >More info White Light 4 h Original data Light treatments
363 oas-a1.1 root -0.04 >More info -0.57 >More info WT-Untreated Root Original data GEO bulk
364 SA 3h 0.08 >More info 0.52 >More info EtOH 3h 3hr Original data GEO bulk
365 Atwrky63 -0.55 >More info -0.04 >More info Col0 none leaf Original data GEO bulk
366 HairpinZ 4 h (leaf) 0.62 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
367 0h hml 0.64 >More info -0.06 >More info 0h wt Original data
368 Shoot dark control 24h 0.01 >More info 0.57 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
369 JA 3h 0.05 >More info 0.52 >More info EtOH 3h 3hr Original data GEO bulk
370 vte2 leaves 120h LT 0.51 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
371 Shoot apex inflorescence (after bolting) -0.10 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
372 seed germinating in countinuous light 24h SL -0.12 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
373 ex1 flu dark 8hours/30 minute light 0.03 >More info 0.51 >More info col dark 8hours/30 minute light Original data GEO bulk
374 seedling 3h after HZE WT 0.51 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
375 COL-0-Fe--shoot 0.00 >More info -0.53 >More info COL-0-Ctrl--shoot shoot Original data
376 cdpk6-yfp 0.56 >More info -0.04 >More info Kan seedlings Original data GEO bulk
377 root - 08% oxygen - 30min -0.01 >More info 0.53 >More info root - 21% oxygen - 30min Original data GEO bulk
378 Mh0 UV -0.50 >More info -0.01 >More info Mh0 mock UV seedling Original data
379 Col PSTDC3000 24h 0.64 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
380 CCA1-ox 6am non-polysomal 0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
381 seedling 24h after Gamma WT 0.07 >More info -0.57 >More info seedling day 2 unirradiated WT 24h Original data
382 IAA 0.5 h 0.50 >More info -0.01 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
383 T6 leaf-drought -0.52 >More info 0.09 >More info T6 leaf-well watered Original data GEO bulk
384 root longitudinal zone-2 -Fe 0.12 >More info -0.50 >More info root longitudinal zone-2 standard Original data GEO bulk
385 irradiated leaf (WT 5d) 0.36 >More info -0.54 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
386 Light 3day hml -0.61 >More info 0.52 >More info 0h hml Original data
387 ARR22-ox -0.56 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings