sid2-2 mock

4.0:Analysis result - correlation network

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Module-based correlation network(MCN) centered on sid2-2 mock

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List of experiments correlated with "sid2-2 mock"

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Score	Experiment	Correlation from sid2-2 mock	Correlation to sid2-2 mock	Control Experiment	Treatment	Tissue	Link to original data	Experimental Category
1	sid2-2 mock	1.00 >More info	1.00 >More info	Col0 mock	DMSO control	rosette leaves	Original data	GEO bulk
2	sid2-2 safener	0.89 >More info	0.89 >More info	safener treated	safener (mefenpyr and isoxadifen)	rosette leaves	Original data	GEO bulk
3	eds16 whole leaf 7dpi	0.80 >More info	0.83 >More info	Col whole leaf 7dpi		whole leaf	Original data	GEO bulk
4	eds16 whole leaf 3dpi	0.74 >More info	0.80 >More info	Col whole leaf 3dpi		whole leaf	Original data	GEO bulk
5	sid2-PsmES4326-24hpi	0.77 >More info	0.76 >More info	Col0-PsmES4326-24hpi	PsmES4326	leaf	Original data	GEO bulk
6	eds16 whole leaf 1dpi	0.65 >More info	0.84 >More info	Col whole leaf 1dpi		whole leaf	Original data	GEO bulk
7	eds16 whole leaf 5dpi	0.75 >More info	0.73 >More info	Col whole leaf 5dpi		whole leaf	Original data	GEO bulk
8	eds16 whole leaf 0h UI	0.65 >More info	0.80 >More info	Col whole leaf 0h UI		whole leaf	Original data	GEO bulk
9	npr1-PsmES4326-24hpi	0.75 >More info	0.69 >More info	Col0-PsmES4326-24hpi	PsmES4326	leaf	Original data	GEO bulk
10	NahG	0.62 >More info	0.81 >More info	Col-0		Leaves	Original data	GEO bulk
11	eds16 whole leaf 7d UI	0.64 >More info	0.71 >More info	Col whole leaf 7d UI		whole leaf	Original data	GEO bulk
12	Mutant NahG(leaf)	0.65 >More info	0.68 >More info	Col-0 (leaf)			Original data	GEO bulk
13	INA	-0.52 >More info	-0.78 >More info	CK	INA	seedling	Original data
14	PstDC3000 48h	-0.45 >More info	-0.77 >More info	WT untreated	48hr	leaf	Original data	GEO bulk
15	sid2	0.66 >More info	0.55 >More info	Col-0-untreated-control	untreated	leaf tissue	Original data	GEO bulk
16	Mock pft1 leaf	0.51 >More info	0.70 >More info	Mock Col-0 leaf	water	leaf	Original data	GEO bulk
17	4tga mock	0.67 >More info	0.53 >More info	Col0 mock	DMSO control	rosette leaves	Original data	GEO bulk
18	eds16 whole leaf 6hpi	0.52 >More info	0.66 >More info	Col whole leaf 6hpi		whole leaf	Original data	GEO bulk
19	atgsnor1-3-avrB-6h	0.51 >More info	0.67 >More info	Col-0-avrB-6h	avrB	leaf tissue	Original data	GEO bulk
20	sid2-avrB-6h	0.60 >More info	0.58 >More info	Col-0-avrB-6h	avrB	leaf tissue	Original data	GEO bulk
21	cat2-short-day 4d	0.56 >More info	0.60 >More info	Col0-SD4	transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark)	rosette leaf material	Original data	GEO bulk
22	camta3-2	-0.57 >More info	-0.58 >More info	WT			Original data	GEO bulk
23	camta2/3 warm	-0.65 >More info	-0.49 >More info	WT warm		entire aerial part	Original data	GEO bulk
24	sid2-2 24hpi A. brassicicola	0.66 >More info	0.47 >More info	Col-0 9 hpi A. brassicicola		3rd-5th true leaves	Original data
25	pad2-PsmES4326-24hpi	0.66 >More info	0.47 >More info	Col0-PsmES4326-24hpi	PsmES4326	leaf	Original data	GEO bulk
26	pmr4-1 powdery mildew	-0.62 >More info	-0.49 >More info	WT powdery mildew	uninoculated		Original data	GEO bulk
27	sid2-2 9 hpi A. brassicicola	0.38 >More info	0.72 >More info	Col-0 9 hpi mock		3rd-5th true leaves	Original data
28	OH1	-0.68 >More info	-0.41 >More info	Col-0		leaves	Original data	GEO bulk
29	cpr5	-0.61 >More info	-0.48 >More info	WT(COL)			Original data	GEO bulk
30	OE WRKY63.3	-0.62 >More info	-0.46 >More info	OE WRKY40.4	none	leaf	Original data	GEO bulk
31	Col-0 INA 6d	-0.53 >More info	-0.55 >More info	Col-0 MOCK 6d			Original data	GEO bulk
32	sid2-1 cold	0.64 >More info	0.43 >More info	WT cold	3 week cold	entire aerial part	Original data	GEO bulk
33	Col-0 INA 48h	-0.50 >More info	-0.57 >More info	Col-0 MOCK 48h			Original data	GEO bulk
34	WT-SA	-0.64 >More info	-0.42 >More info	WT-mock spray	1 mM SA for 6 hrs (spray)	mature leaf	Original data	GEO bulk
35	ex2 flu dark 8hours/30 minute light	0.53 >More info	0.53 >More info	col dark 8hours/30 minute light			Original data	GEO bulk
36	Laer pretreat JA Flg22 0h	0.38 >More info	0.68 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
37	Mutant tga2_5_6	-0.45 >More info	-0.60 >More info	Col-0			Original data	GEO bulk
38	plant (tga2-5-6) 4h control	-0.45 >More info	-0.60 >More info	plant (Col-0) 4h control			Original data	GEO bulk
39	ex1ex2flu dark 8hours/30 minute light	0.55 >More info	0.49 >More info	col dark 8hours/30 minute light			Original data	GEO bulk
40	cpr5scv1	-0.53 >More info	-0.51 >More info	WT(COL)			Original data	GEO bulk
41	cpr5	-0.64 >More info	-0.40 >More info	WT		seedling	Original data	GEO bulk
42	npr1 sni1 SA	-0.60 >More info	-0.42 >More info	npr1 sni1 water	salicylic acid	seedling	Original data	GEO bulk
43	ahg2-1sid2-2	0.44 >More info	0.58 >More info	WT (Col) control			Original data	GEO bulk
44	0h hml	-0.53 >More info	-0.47 >More info	0h wt			Original data
45	cs26 short-day	0.60 >More info	0.40 >More info	Leaves-WT-SD		leaf	Original data	GEO bulk
46	camta1/2/3 warm	-0.62 >More info	-0.38 >More info	WT warm		entire aerial part	Original data	GEO bulk
47	Col-0 SA	-0.43 >More info	-0.57 >More info	Col-0			Original data	GEO bulk
48	Cor hrpS 10h	-0.57 >More info	-0.42 >More info	Mock 10h	Cor hrpS		Original data	GEO bulk
49	Light 3day wt	0.61 >More info	0.37 >More info	0h wt			Original data
50	camta1/3 warm	-0.60 >More info	-0.37 >More info	WT warm		entire aerial part	Original data	GEO bulk
51	over-tAPX	0.42 >More info	0.54 >More info	WT Col			Original data	GEO bulk
52	high R/FR JA spray	0.44 >More info	0.52 >More info	high R/FR mock spray	high R/FR JA spray		Original data	GEO bulk
53	camta3-1	-0.53 >More info	-0.42 >More info	WT			Original data	GEO bulk
54	msh1 recA3 untreated	0.32 >More info	0.63 >More info	WT untreated		above-ground parts	Original data	GEO bulk
55	npr1 sni1 brca2a SA	0.58 >More info	0.36 >More info	npr1 sni1 SA	salicylic acid	seedling	Original data	GEO bulk
56	abi4 vtc2 (I)	-0.55 >More info	-0.38 >More info	Col (I)		rosette	Original data	GEO bulk
57	phyB mutant 22C 10hrs	0.40 >More info	0.53 >More info	L22-10hrs		whole plant excluding roots	Original data	GEO bulk
58	A6 mutant	-0.52 >More info	-0.41 >More info	WT rosette leaves		Rosette leaves	Original data	GEO bulk
59	Bay-0-3h IAA	-0.52 >More info	-0.40 >More info	Bay-0-0h IAA		whole plant	Original data	GEO bulk
60	ex1 flu dark 8hours/30 minute light	0.53 >More info	0.39 >More info	col dark 8hours/30 minute light			Original data	GEO bulk
61	vtc2 (I)	-0.53 >More info	-0.39 >More info	Col (I)		rosette	Original data	GEO bulk
62	mkk1/mkk2 control rep	-0.55 >More info	-0.37 >More info	Col-0 Time 0 rep			Original data	GEO bulk
63	JA	0.31 >More info	0.61 >More info	Col-0 mock		Whole seedling	Original data	GEO bulk
64	4tga safener	0.54 >More info	0.37 >More info	safener treated	safener (mefenpyr and isoxadifen)	rosette leaves	Original data	GEO bulk
65	Elevated CO2 AMPLE N DAY	-0.39 >More info	-0.52 >More info	Ambient CO2 AMPLE N DAY		Youngest Most Fully Expanded Leaf	Original data
66	pad4-PsmES4326-24hpi	0.57 >More info	0.34 >More info	Col0-PsmES4326-24hpi	PsmES4326	leaf	Original data	GEO bulk
67	Col whole leaf 7dpi	-0.58 >More info	-0.33 >More info	Col whole leaf 7d UI		whole leaf	Original data	GEO bulk
68	Col-0 DCA 6d	-0.31 >More info	-0.60 >More info	Col-0 MOCK 6d			Original data	GEO bulk
69	overexpresser LBD38 in -N	0.66 >More info	0.23 >More info	WT in -N	nitrogen depletion	whole seedling	Original data	GEO bulk
70	plant (Col-0) 4h phytoprostane A1	0.38 >More info	0.50 >More info	plant (tga2-5-6) 4h control			Original data	GEO bulk
71	bri1-116	0.14 >More info	0.73 >More info	Col		seedling	Original data	GEO bulk
72	CAX1/CAX3 mutant	-0.53 >More info	-0.33 >More info	Col		whole plant	Original data	GEO bulk
73	Light 4h polysome-bound	0.35 >More info	0.51 >More info	Dark polysome-bound	white light	seedlings (aerial parts)	Original data	GEO bulk
74	35S:RPS4 eds1-2 24h	0.65 >More info	0.20 >More info	35S:RPS4 24h		leaves	Original data
75	efr-1 +elf18 10h	0.51 >More info	0.34 >More info	WT +elf18 10h	elf18		Original data	GEO bulk
76	Dry midnight	0.33 >More info	0.52 >More info	Wet midnight	water-limited	whole rosette	Original data	GEO bulk
77	Light 4h steady-state	0.34 >More info	0.51 >More info	Dark steady-state	white light	seedlings (aerial parts)	Original data	GEO bulk
78	smg7b-1	-0.59 >More info	-0.26 >More info	WT		whole plant	Original data	GEO bulk
79	penta Pst DC3000 12hpi	-0.63 >More info	-0.22 >More info	Laer Pst DC3000 12hpi		leaf discs	Original data	GEO bulk
80	SA 3h	-0.32 >More info	-0.52 >More info	EtOH 3h	3hr		Original data	GEO bulk
81	RPL18 TuMV inoculated polysomal RNA	-0.56 >More info	-0.27 >More info	mock inoculated polysomal RNA		PO	Original data	GEO bulk
82	WT Red light 1h	0.30 >More info	0.53 >More info	WT Dark 1h		deetiolated seedling	Original data	GEO bulk
83	atmospheric CO2 low Mg shoot	-0.61 >More info	-0.22 >More info	atmospheric CO2 normal Mg shoot		Shoot	Original data
84	cat2-long-day 2d	0.52 >More info	0.30 >More info	Col0-LD2	transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark)	rosette leaf material	Original data	GEO bulk
85	6-trichlorophenoxyacetic acid 3 h	0.26 >More info	0.56 >More info	Mock 3 h			Original data	Effect of auxin inhibitors on seedlings
86	Methyl Jasmonate 3 h	0.24 >More info	0.58 >More info	Mock 3 h			Original data	Basic hormone treatment of seedlings
87	smg5-2	-0.54 >More info	-0.27 >More info	WT		whole plant	Original data	GEO bulk
88	vtc1-1	-0.26 >More info	-0.55 >More info	Col-0		whole plant	Original data	GEO bulk
89	pif5 high R/FR	0.21 >More info	0.60 >More info	Col-0 high R/FR	high R/FR	seedlings	Original data	GEO bulk
90	2d dark-grown WT(Col-0)/1 hr red light	0.30 >More info	0.50 >More info	2d dark-grown WT seedling			Original data	GEO bulk
91	overexpresser LBD37 in -N	0.60 >More info	0.18 >More info	WT in -N	nitrogen depletion	whole seedling	Original data	GEO bulk
92	Ibuprofen 3 h	0.22 >More info	0.56 >More info	Mock 3 h			Original data	Effect of other inhibitors on seedlings
93	Mutant siz1-3 (Drought)	-0.50 >More info	-0.27 >More info	Col-0 (Drought)			Original data	GEO bulk
94	siz1-3 drought	-0.50 >More info	-0.27 >More info	Col-0 drought			Original data	GEO bulk
95	35S:RPS4 eds1-2 8h	0.55 >More info	0.22 >More info	35S:RPS4 8h		leaves	Original data
96	ERF96OE	0.25 >More info	0.52 >More info	WT		leaf	Original data
97	Shoot apex inflorescence (after bolting)	0.11 >More info	0.65 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
98	seed germinating in countinuous light 24h SL	0.09 >More info	0.67 >More info	Control for tissue data		seed	Original data	GEO bulk
99	tga2 tga5 tga6 ctrl	0.59 >More info	0.15 >More info	Col-0 ctrl (control genotype tga2 tag5 tga6)	control		Original data
100	Mutant siz1-3	-0.51 >More info	-0.23 >More info	Col-0			Original data	GEO bulk
101	siz1-3 control	-0.51 >More info	-0.23 >More info	Col-0 control			Original data	GEO bulk
102	FarRed Light 4 h	0.18 >More info	0.56 >More info	White Light 4 h			Original data	Light treatments
103	Red/FR Light 4 h	-0.18 >More info	-0.56 >More info	FarRed Light 4 h			Original data	Light treatments
104	B.cinerea 18 h infection	0.10 >More info	0.64 >More info	Mock 18 h			Original data	Botrytis cinerea infection
105	Botrytis cinerea 18h	0.10 >More info	0.64 >More info	control 18h			Original data	GEO bulk
106	Cor 24h	-0.54 >More info	-0.19 >More info	Mock 24h	Cor		Original data	GEO bulk
107	S5	0.10 >More info	0.63 >More info	WT			Original data	GEO bulk
108	irradiated leaf (WT 5d)	0.13 >More info	0.60 >More info	control leaf (WT 5d)		rosette leaf only	Original data	GEO bulk
109	Red Light 4 h	-0.13 >More info	-0.59 >More info	White Light 4 h			Original data	Light treatments
110	Glyphosate EC50	0.15 >More info	0.57 >More info	Carrier (Glyphosate)			Original data	GEO bulk
111	WT in -N	-0.56 >More info	-0.15 >More info	WT in FN	nitrogen depletion	whole seedling	Original data	GEO bulk
112	wrky72-1-NOCO2 INFECTED	-0.50 >More info	-0.21 >More info	WT-NOCO2 INFECTED			Original data	GEO bulk
113	30m light	0.20 >More info	0.51 >More info	before light		whole seedlings	Original data	GEO bulk
114	2hr transitory KNO3 PrR cell	-0.20 >More info	-0.51 >More info	2hr KCl control PrR cell		Protoplasted root cells	Original data	GEO bulk
115	GO5; 8h switch to ambient CO2 concentrations;	0.19 >More info	0.52 >More info	WT; 8h switch to ambient CO2 concentrations;		2 whole rosettes	Original data
116	Pst-DC3000(hrpA)-4hpi	-0.17 >More info	-0.53 >More info	Pst-DC3000-4hpi			Original data	GEO bulk
117	flu	0.19 >More info	0.51 >More info	WT Col			Original data	GEO bulk
118	msh1 recA3 heat shock	0.11 >More info	0.59 >More info	WT heat shock		above-ground parts	Original data	GEO bulk
119	ahg2-1	0.16 >More info	0.53 >More info	WT (Col) control			Original data	GEO bulk
120	S58-2	-0.53 >More info	-0.14 >More info	wt			Original data	GEO bulk
121	Leafminer damaged seedlings	0.11 >More info	0.56 >More info	Healthy seedlings		leaves	Original data	GEO bulk
122	xyl-grown cell culture- 1h 1mM Suc	0.12 >More info	0.55 >More info	xyl-grown cell culture- 1h 1mM Xyl		cell culture	Original data
123	WT powdery mildew	-0.52 >More info	-0.14 >More info	WT control	inoculation with the powdery mildew pathogen		Original data	GEO bulk
124	triploid female excess	0.13 >More info	0.53 >More info	tetraploid			Original data	GEO bulk
125	seedlings +5AC	-0.54 >More info	-0.10 >More info	control seedlings		10-day old whole seedling	Original data	GEO bulk
126	atgsnor1-1-avrB-6h	-0.51 >More info	-0.13 >More info	Col-0-avrB-6h	avrB	leaf tissue	Original data	GEO bulk
127	IAA7mII over-expressor IAA Treated	-0.08 >More info	0.69 >More info	empty vector IAA Treated			Original data	GEO bulk
128	35S::PI ap3-3 35S::AP-GR +DEX	-0.08 >More info	0.68 >More info	0hr DEX			Original data	GEO bulk
129	atgsnor1-1	0.62 >More info	-0.02 >More info	Col-0-untreated-control	untreated	leaf tissue	Original data	GEO bulk
130	Light 3day hml	0.52 >More info	0.07 >More info	0h hml			Original data
131	Mutant sav3-2 (WL)	-0.08 >More info	-0.51 >More info	Col-0 (WL)			Original data	GEO bulk
132	sav3-2 light	-0.08 >More info	-0.51 >More info	Col-0 light		seedlings	Original data	GEO bulk
133	Heat shock optimum	-0.08 >More info	0.65 >More info	Heat shock baseline	Photosynthesis at optimum temperature	leaf first fully expanded	Original data	GEO bulk
134	bio4-1 mutant leaves	-0.51 >More info	-0.05 >More info	WT leaves		leaves	Original data	GEO bulk
135	ANOXIA	-0.00 >More info	-0.51 >More info	ANOXIA+SUCROSE			Original data	GEO bulk
136	CCA1-ox 6am non-polysomal	-0.02 >More info	0.51 >More info	WT 6am non-polysomal		aerial part	Original data
137	SA Treated	-0.55 >More info	0.08 >More info	Water			Original data	GEO bulk
138	siliques AtHb1 control	-0.09 >More info	0.52 >More info	siliques WT control	control	silique	Original data	GEO bulk
139	bZIP1ko mutant N+Light-	-0.53 >More info	0.14 >More info	WT-sib N+Light-		whole plant	Original data	GEO bulk
140	Shoot -Cs	-0.14 >More info	0.51 >More info	Control-shoot			Original data	GEO bulk
141	Col0-PsmES4326-24hpi	-0.30 >More info	0.61 >More info	Col0-mock-24hpi		leaf	Original data	GEO bulk
142	Laer pretreat GA Flg22 1h	-0.42 >More info	0.71 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
143	Col BTH	-0.63 >More info	0.67 >More info	Col		rosettes	Original data	GEO bulk