4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on B.cinerea 18 h infection
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List of experiments correlated with "B.cinerea 18 h infection"  Help Download transcriptome of top 30
Score Experiment Correlation from
B.cinerea 18 h infection		 Correlation to
B.cinerea 18 h infection		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 B.cinerea 18 h infection 1.00 >More info 1.00 >More info Mock 18 h Original data Botrytis cinerea infection
2 Botrytis cinerea 18h 1.00 >More info 1.00 >More info control 18h Original data GEO bulk
3 Shoot -Cs 0.88 >More info 0.90 >More info Control-shoot Original data GEO bulk
4 Botrytis cinerea 48h 0.87 >More info 0.86 >More info control 48h Original data GEO bulk
5 Glyphosate EC50 0.84 >More info 0.81 >More info Carrier (Glyphosate) Original data GEO bulk
6 Pst-DC3000(avrRpm1)-4hpi 0.81 >More info 0.83 >More info Pst-DC3000-4hpi Original data GEO bulk
7 WT Col-0 Bgh inoculated 0.81 >More info 0.83 >More info WT Col-0 Un-inoculated Original data GEO bulk
8 ataf1-1 mutant Col-0 Bgh inoculated 0.84 >More info 0.79 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
9 cpr5npr1svi1 0.83 >More info 0.78 >More info WT(COL) Original data GEO bulk
10 PAHs stress 0.83 >More info 0.77 >More info exp control phenanthrene whole plants Original data GEO bulk
11 Sulfometuron EC50 0.85 >More info 0.75 >More info Carrier Original data GEO bulk
12 DFPM 0.85 >More info 0.73 >More info control Original data GEO bulk
13 col-5 hrpA 12h 0.77 >More info 0.80 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
14 IMI 4mM 0.78 >More info 0.79 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
15 ice1 control 0.83 >More info 0.74 >More info WT control Original data GEO bulk
16 Imidazolinone EC50 0.83 >More info 0.74 >More info Carrier (Imidazolinone) Original data GEO bulk
17 del1-1 mutant 5d uninfected 0.84 >More info 0.73 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
18 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.82 >More info 0.75 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
19 ein2-1 9 hpi A. brassicicola 0.78 >More info 0.78 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
20 HopZ1a treated 0.77 >More info 0.79 >More info col Original data GEO bulk
21 Col whole leaf 7dpi 0.81 >More info 0.74 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
22 Col-0 9 hpi A. brassicicola 0.76 >More info 0.79 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
23 flu over-tAPX 0.77 >More info 0.78 >More info WT Col Original data GEO bulk
24 R. solani AG2-1 0.88 >More info 0.66 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
25 Fenclorim 4hr 0.77 >More info 0.77 >More info Acetone 4hr root Original data GEO bulk
26 ERF96OE 0.70 >More info 0.84 >More info WT leaf Original data
27 P.p 30hai 0.79 >More info 0.75 >More info At-Control roots Original data GEO bulk
28 AvrRpt2 Col-0 6hpi 0.78 >More info 0.75 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
29 Col-0 under 4 days salt 0.76 >More info 0.77 >More info Col-0 under control 4 days salt treatment rosette Original data
30 cat2-2; 8h switch to ambient CO2 concentrations; 0.78 >More info 0.75 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
31 apk1 apk2 0.86 >More info 0.67 >More info Col0-control whole rosette Original data GEO bulk
32 bZIP1ko mutant N+Light- 0.73 >More info 0.80 >More info WT-sib N+Light- whole plant Original data GEO bulk
33 Cor 10h 0.78 >More info 0.75 >More info Mock 10h Cor Original data GEO bulk
34 35S::PI ap3-3 35S::AP-GR +DEX 0.69 >More info 0.84 >More info 0hr DEX Original data GEO bulk
35 Elevated CO2 AMPLE N NIGHT 0.74 >More info 0.78 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
36 gh3.5-1D 48 hpi 0.74 >More info 0.78 >More info Col-0 uninoculated Original data GEO bulk
37 Col whole leaf 5dpi 0.76 >More info 0.76 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
38 col-5 DC3000 12h 0.72 >More info 0.80 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
39 SLWF infested 0.73 >More info 0.79 >More info SLWF uninfested rosette tissue Original data GEO bulk
40 GST NPP1 4 h (leaf) 0.77 >More info 0.74 >More info Mock 4 h (leaf) Original data Elicitor treatments
41 Pto inoculated 0.76 >More info 0.75 >More info col Original data GEO bulk
42 Mutant gh3.5-1D (AvrRpt2) 0.70 >More info 0.81 >More info Col-0 (AvrRpt2) Original data GEO bulk
43 WT powdery mildew 0.80 >More info 0.71 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
44 AgNO3 3 h 0.82 >More info 0.69 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
45 DC3000 24h 0.69 >More info 0.82 >More info Mock 24h DC3000 Original data GEO bulk
46 ice1 6H Cold 0.82 >More info 0.68 >More info WT 6H Cold Original data GEO bulk
47 mil4 BTH 0.77 >More info 0.73 >More info Col BTH rosettes Original data GEO bulk
48 HopZ1a treated ulp1c ulp1d 0.74 >More info 0.76 >More info col Original data GEO bulk
49 sid2-2 9 hpi A. brassicicola 0.76 >More info 0.74 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
50 Triazolopyrimidine EC50 0.81 >More info 0.68 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
51 npr1-1 SA -0.83 >More info -0.66 >More info Col-0 SA complete seedling Original data
52 Primisulfuron EC50 0.78 >More info 0.71 >More info Carrier (primisulfuron) Original data GEO bulk
53 PBZ 0.79 >More info 0.70 >More info none PBZ Rosette Original data GEO bulk
54 WT-SA 0.78 >More info 0.71 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
55 R. solani AG8 0.84 >More info 0.65 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
56 Leafminer locally damaged thaliana seedlings 0.76 >More info 0.72 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
57 WT Bc inoculation 14h 0.83 >More info 0.65 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
58 Col leaves 48h LT 0.78 >More info 0.70 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
59 hrcC 0.73 >More info 0.75 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
60 Elevated CO2 AMPLE N DAY 0.74 >More info 0.74 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
61 ABA DFPM 0.76 >More info 0.72 >More info control Original data GEO bulk
62 CLO 4mM 0.68 >More info 0.79 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
63 Chitosan 3h Treatment 0.80 >More info 0.67 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
64 Osmotic Stress 24 h (shoot) 0.77 >More info 0.70 >More info Stress mock 24 h (shoot) Original data Stress treatments
65 flu 0.69 >More info 0.78 >More info WT Col Original data GEO bulk
66 ceh1 mutant 0.77 >More info 0.70 >More info Parent line Original data
67 gun1gun5 far-red pretreated -0.75 >More info -0.72 >More info WT far-red pretreated Original data GEO bulk
68 cpr5scv1 0.77 >More info 0.69 >More info WT(COL) Original data GEO bulk
69 shoots bhlh100/101 0uM Fe 0.83 >More info 0.63 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
70 P.p 10.5hai 0.73 >More info 0.73 >More info At-Control roots Original data GEO bulk
71 anac017-2 AntimycinA 3h -0.74 >More info -0.72 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
72 Col ozone 2d 0.72 >More info 0.74 >More info Col clean-air 2d ozone Original data GEO bulk
73 lht1 PstDC3000 48h 0.81 >More info 0.65 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
74 hrpA 7h 0.74 >More info 0.72 >More info Mock 7h hrpA Original data GEO bulk
75 WT-NOCO2 INFECTED 0.78 >More info 0.67 >More info WT-MOCK Original data GEO bulk
76 MIL4 ox BTH 0.81 >More info 0.64 >More info Col BTH Original data GEO bulk
77 bak1-3 +Pep2 10h 0.69 >More info 0.76 >More info WT +Pep2 10h Pep2 Original data GEO bulk
78 Cor hrpS 10h 0.82 >More info 0.63 >More info Mock 10h Cor hrpS Original data GEO bulk
79 Laer Flg22 2h 0.75 >More info 0.70 >More info Laer Control leaf discs Original data GEO bulk
80 Laer pretreat GA+JA Flg22 0h 0.79 >More info 0.65 >More info Laer pretreat water control leaf discs Original data GEO bulk
81 WT 1wk -P 0.85 >More info 0.59 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
82 pvip1 pvip2 0.73 >More info 0.71 >More info Col-0 whole rosettes Original data GEO bulk
83 penta Alternaria 3dpi 0.79 >More info 0.65 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
84 col-5 hrpA 2h 0.79 >More info 0.64 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
85 mpk6-ko Flg22 4h 0.68 >More info 0.75 >More info mpk6-ko H2O 4h Original data GEO bulk
86 edr1 18 h powdery mildew 0.80 >More info 0.63 >More info Col-0 18 h powdery mildew Original data GEO bulk
87 cpr5npr1 0.71 >More info 0.72 >More info WT(COL) Original data GEO bulk
88 S15-118 0.72 >More info 0.71 >More info wt Original data GEO bulk
89 nia1nia2 0.74 >More info 0.69 >More info Col-0 whole seedlings Original data GEO bulk
90 CMP 24hr 0.69 >More info 0.74 >More info Acetone 24hr root Original data GEO bulk
91 WT 2-4h Xanthomonas 0.78 >More info 0.64 >More info WT T0 Original data GEO bulk
92 ice1 24H Cold 0.75 >More info 0.67 >More info WT 24H Cold Original data GEO bulk
93 miR393 flg22 2h 0.72 >More info 0.70 >More info WT 0h Leaf tissue Original data GEO bulk
94 Differentiation 12h 0.73 >More info 0.69 >More info Differentiation 0h leaves Original data
95 col-5 DC3000-avrRpm 4h 0.74 >More info 0.68 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
96 35S:RPS4 eds1-2 8h -0.74 >More info -0.68 >More info 35S:RPS4 8h leaves Original data
97 Elevated CO2 fully expanded leaf 0.85 >More info 0.56 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
98 wrky33 Bc inoculation 14h 0.80 >More info 0.61 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
99 P.p 6hai 0.73 >More info 0.68 >More info At-Control roots Original data GEO bulk
100 ice1 3H Cold 0.80 >More info 0.61 >More info WT 3H Cold Original data GEO bulk
101 sid2 -0.75 >More info -0.66 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
102 Seedling KUA1-IOX est 0.67 >More info 0.74 >More info Seedling KUA1-IOX mock Original data
103 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.77 >More info 0.64 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
104 smg7b-1 0.76 >More info 0.65 >More info WT whole plant Original data GEO bulk
105 CMP 4hr 0.68 >More info 0.73 >More info Acetone 4hr root Original data GEO bulk
106 Cor 24h 0.68 >More info 0.73 >More info Mock 24h Cor Original data GEO bulk
107 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.77 >More info 0.64 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
108 Laer Flg22 1h 0.72 >More info 0.69 >More info Laer Control leaf discs Original data GEO bulk
109 Laer treat paclobutrazol (PAC) 0.70 >More info 0.71 >More info Laer Control leaf discs Original data GEO bulk
110 Col-Luc WT 3h antimycin A 0.72 >More info 0.69 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
111 essp4/sdg8-5 mutant 0.78 >More info 0.62 >More info wild type leaf Original data GEO bulk
112 Laer Flg22+GA 2h 0.73 >More info 0.67 >More info Laer Control leaf discs Original data GEO bulk
113 Col-0 flu HL 3h 0.73 >More info 0.67 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
114 leaf13 0.64 >More info 0.76 >More info unwounded leaves none Original data GEO bulk
115 TNT-seedlings 0.65 >More info 0.75 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
116 coi1-16 ein2 sid2 ctrl -0.75 >More info -0.65 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
117 Col whole leaf amplified 5 dpi 0.78 >More info 0.62 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
118 S58-2 0.67 >More info 0.72 >More info wt Original data GEO bulk
119 DC3000 2 h (leaf) 0.64 >More info 0.75 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
120 Col0-PsmES4326-24hpi 0.78 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
121 rcf1-1 cold 12h 0.75 >More info 0.64 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
122 GO5; 8h switch to ambient CO2 concentrations; 0.73 >More info 0.66 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
123 mkk1/mkk2 24h BTH rep 0.71 >More info 0.68 >More info Col-0 24h BTH rep Original data GEO bulk
124 35S:RPS4 eds1-2 24h -0.69 >More info -0.70 >More info 35S:RPS4 24h leaves Original data
125 Mature callus 0.70 >More info 0.69 >More info Young callus hypocotyls Original data GEO bulk
126 safener treated 0.69 >More info 0.70 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
127 aba3-1 0.76 >More info 0.62 >More info wt Original data GEO bulk
128 miR393 flg22 1h 0.73 >More info 0.65 >More info WT 0h Leaf tissue Original data GEO bulk
129 Leaf GLU1-KO 0.73 >More info 0.65 >More info Leaf Col(0) rosette leaves Original data GEO bulk
130 root Dosed gold 0.75 >More info 0.63 >More info root No gold .125 mM gold 24 h roots Original data
131 vte2-1 3d vernalization 0.78 >More info 0.60 >More info WT 3d vernalization Original data GEO bulk
132 pnp1-1 1wk +P 0.74 >More info 0.64 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
133 Col-0 ozone 0.77 >More info 0.61 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
134 lht1 untreated 0.73 >More info 0.65 >More info WT untreated untreated leaf Original data GEO bulk
135 WT flg22 2h 0.72 >More info 0.66 >More info WT 0h Leaf tissue Original data GEO bulk
136 0.125 mM gold 24 h 0.75 >More info 0.63 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
137 ASL9-ox -0.72 >More info -0.66 >More info WT aerial parts of seedlings Original data GEO bulk
138 Phaseolicola 2 h (leaf) 0.62 >More info 0.75 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
139 Col-0 INA 48h 0.76 >More info 0.61 >More info Col-0 MOCK 48h Original data GEO bulk
140 msh1 albino 0.75 >More info 0.62 >More info WT aerial part Original data GEO bulk
141 det2 light-dark -0.84 >More info -0.53 >More info det2 light light-dark Original data GEO bulk
142 PNO8 3 h 0.66 >More info 0.71 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
143 Laer Flg22+GA 1h 0.70 >More info 0.67 >More info Laer Control leaf discs Original data GEO bulk
144 hrpA fliC 7h 0.73 >More info 0.64 >More info Mock 7h hrpA fliC Original data GEO bulk
145 35S::ERF104 Flg22 4h 0.65 >More info 0.72 >More info 35S::ERF104 H2O 4h Original data GEO bulk
146 GSH 0.72 >More info 0.65 >More info control GSH treated seedlings Original data GEO bulk
147 Time-0 chr11-1chr17-1 -0.81 >More info -0.55 >More info Time-0 Col-0 leaf explants Original data
148 UV 0.80 >More info 0.56 >More info WT aerial region Original data GEO bulk
149 seedlings-week-old RECA1-overexpressing
transgenic		 0.68 >More info 0.68 >More info seedlings-week-old Col-0 seedlings Original data
150 pnp1-1 3h +P 0.79 >More info 0.57 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
151 dor drought 0.63 >More info 0.73 >More info WT drought Original data GEO bulk
152 IRP1-OE-Fe--shoot 0.72 >More info 0.64 >More info COL-0-Fe--shoot shoot Original data
153 WT flg22 1h 0.70 >More info 0.66 >More info WT 0h Leaf tissue Original data GEO bulk
154 Col ozone 3h 0.73 >More info 0.63 >More info Col clean-air 3h ozone Original data GEO bulk
155 ARR22-ox (t-zeatin 3 h) 0.76 >More info 0.60 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
156 oligomycin 4 h 0.73 >More info 0.62 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
157 rosette Dark Wounded 0.64 >More info 0.71 >More info rosette Dark Control Original data GEO bulk
158 Te ozone 0.72 >More info 0.63 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
159 LTN008-2 aza-dc 0.78 >More info 0.57 >More info LTN012-2 Mock Original data
160 Compost 0.73 >More info 0.62 >More info Perlite Compost Original data GEO bulk
161 aerial organ callus inducing medium 48 h 0.75 >More info 0.60 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
162 Laer pretreat GA+JA Flg22 2h 0.75 >More info 0.60 >More info Laer pretreat water control leaf discs Original data GEO bulk
163 cpr5 0.68 >More info 0.66 >More info WT(COL) Original data GEO bulk
164 Shoot -K 0.67 >More info 0.67 >More info Control-shoot Original data GEO bulk
165 K starvation (shoot) 0.67 >More info 0.67 >More info Ws (shoot) Original data GEO bulk
166 DC3000 7h 0.62 >More info 0.72 >More info Mock 7h DC3000 Original data GEO bulk
167 Laer pretreat GA+JA Flg22 1h 0.74 >More info 0.60 >More info Laer pretreat water control leaf discs Original data GEO bulk
168 pepr1-1 Pepr2-3 +Pep2 10h -0.72 >More info -0.62 >More info WT +Pep2 10h Pep2 Original data GEO bulk
169 AFB1 flg22 2h 0.72 >More info 0.62 >More info WT 0h Leaf tissue Original data GEO bulk
170 WT NAA/flg 1h 0.70 >More info 0.64 >More info WT 0h Leaf tissue Original data GEO bulk
171 UV Stress 24 h (shoot) 0.73 >More info 0.61 >More info Stress mock 24 h (shoot) Original data Stress treatments
172 cop1 Seedling BL 0.65 >More info 0.69 >More info WT Seedling BL Original data GEO bulk
173 low water potential 0.70 >More info 0.64 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
174 AvrRpm1 2 h (leaf) 0.66 >More info 0.67 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
175 camta1/3 warm 0.73 >More info 0.60 >More info WT warm entire aerial part Original data GEO bulk
176 Ba1 UV 0.77 >More info 0.56 >More info Ba1 mock UV seedling Original data
177 erf104-ko Flg22 4h 0.63 >More info 0.70 >More info erf104-ko H2O 4h Original data GEO bulk
178 Col-0-avrB-6h 0.65 >More info 0.68 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
179 sta1 0.66 >More info 0.66 >More info WT Original data GEO bulk
180 CT101 ozone 0.76 >More info 0.56 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
181 Leafminer damaged seedlings 0.76 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
182 pepr1-1 Pepr2-3 +Pep2 2h -0.64 >More info -0.68 >More info WT +Pep2 2h Pep2 Original data GEO bulk
183 arf2 brz -0.73 >More info -0.59 >More info arf2 mock Original data GEO bulk
184 anac017-1 H2O2 3h -0.71 >More info -0.60 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
185 WT H2O2 3h 0.72 >More info 0.59 >More info WT water 3h 3h_H2O2 Original data GEO bulk
186 sdg2 0.79 >More info 0.52 >More info wt seedling Original data GEO bulk
187 cdpk6-yfp 0.78 >More info 0.53 >More info Kan seedlings Original data GEO bulk
188 mkk1/mkk2 control rep 0.70 >More info 0.61 >More info Col-0 Time 0 rep Original data GEO bulk
189 Wounding Stress3 h (shoot) 0.62 >More info 0.69 >More info Stress mock 3 h (shoot) Original data Stress treatments
190 AFB1 flg22 1h 0.65 >More info 0.66 >More info WT 0h Leaf tissue Original data GEO bulk
191 atgsnor1-1 -0.65 >More info -0.65 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
192 pmr5 0.63 >More info 0.67 >More info Col-0 Original data GEO bulk
193 WT AntimycinA 3h 0.67 >More info 0.63 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
194 toc1-1-49hr 0.70 >More info 0.60 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
195 toc1-1-77hr 0.71 >More info 0.59 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
196 Blue Light 4 h 0.82 >More info 0.48 >More info White Light 4 h Original data Light treatments
197 pmr5 pmr6 0.66 >More info 0.63 >More info Col-0 Original data GEO bulk
198 Mutant siz1-3 0.72 >More info 0.57 >More info Col-0 Original data GEO bulk
199 apum23 0.75 >More info 0.54 >More info WT (Col-3) aerial parts Original data GEO bulk
200 Mutant coi1(leaf) -0.62 >More info -0.67 >More info Col-0 (leaf) Original data GEO bulk
201 siz1-3 control 0.72 >More info 0.57 >More info Col-0 control Original data GEO bulk
202 dde2-2 9 hpi A. brassicicola 0.72 >More info 0.56 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
203 35S-MIF1 dark grown 0.72 >More info 0.56 >More info Dark-grown WT control Original data GEO bulk
204 RPL18 TuMV inoculated total RNA 0.63 >More info 0.65 >More info mock inoculated total RNA PO Original data GEO bulk
205 Col-0 DCA 48h 0.71 >More info 0.57 >More info Col-0 MOCK 48h Original data GEO bulk
206 oas-a1.1 Cd 24h 0.61 >More info 0.66 >More info Cd 24h root Shoot Original data GEO bulk
207 WT +Pep2 10h 0.77 >More info 0.50 >More info WT untreated Pep2 Original data GEO bulk
208 toc1-1-53hr 0.75 >More info 0.52 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
209 treated group 0.60 >More info 0.66 >More info Control group Original data
210 downy mildew cotyledons late stage 0.83 >More info 0.43 >More info mock inoculated Cotyledons Original data GEO bulk
211 csn5 (csn5a-2 csn5b) light 0.67 >More info 0.59 >More info WT light Original data GEO bulk
212 Laer pretreat GA Flg22 1h 0.54 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
213 E.coli TUV86 2 fliC 7h 0.64 >More info 0.61 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
214 cat2-hCO2 -0.82 >More info -0.43 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
215 ataf1-1 mutant Col-0 Un-inoculated -0.71 >More info -0.54 >More info WT Col-0 Un-inoculated Original data GEO bulk
216 Stem tissue 5 days NAA 0.74 >More info 0.51 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
217 CHS-silenced type -0.81 >More info -0.44 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
218 gai Control 0.72 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
219 sid2-1 cold -0.69 >More info -0.56 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
220 WT roots - Fe 0.59 >More info 0.66 >More info WT roots + Fe Roots Original data GEO bulk
221 amiR-tor induced 6d 0.52 >More info 0.73 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
222 IRP1-OE-Ctrl--shoot 0.68 >More info 0.57 >More info COL-0-Ctrl--shoot shoot Original data
223 myb3 myb3r4d 0.68 >More info 0.56 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
224 short 12-degree- 0.58 >More info 0.66 >More info control short Original data GEO bulk
225 C24 ozone 0.69 >More info 0.55 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
226 ARR22-ox 0.76 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
227 vtc1 (II) 0.74 >More info 0.50 >More info Col (II) rosette Original data GEO bulk
228 cpr5 0.65 >More info 0.59 >More info WT seedling Original data GEO bulk
229 5-Triiodobenzoic acid3 h 0.67 >More info 0.57 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
230 edr1 36 h powdery mildew 0.72 >More info 0.52 >More info Col-0 36 h powdery mildew Original data GEO bulk
231 abi4 vtc2 (I) 0.67 >More info 0.57 >More info Col (I) rosette Original data GEO bulk
232 WT NAA/flg 2h 0.65 >More info 0.58 >More info WT 0h Leaf tissue Original data GEO bulk
233 WT +elf18 10h 0.63 >More info 0.60 >More info WT untreated elf18 Original data GEO bulk
234 seedlings protease IV 0.57 >More info 0.66 >More info seedlings nontreated control whole seedling Original data
235 eds16 whole leaf 5dpi -0.57 >More info -0.66 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
236 M6PR transgenic leaf 100mM NaCl -0.50 >More info -0.73 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
237 efr-1 +elf18 10h -0.58 >More info -0.65 >More info WT +elf18 10h elf18 Original data GEO bulk
238 vtc2 (I) 0.67 >More info 0.55 >More info Col (I) rosette Original data GEO bulk
239 WT no Pi 0.66 >More info 0.56 >More info WT complete seedlings Original data
240 E.coli 0157 H7 7h 0.63 >More info 0.59 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
241 35S:LOB-GR mock 0.69 >More info 0.53 >More info Col mock mock seedling Original data GEO bulk
242 8h-DC3000 avrRpm1 0.63 >More info 0.59 >More info 8h-DC3000 leaves Original data GEO bulk
243 Laer pretreat JA Flg22 2h 0.73 >More info 0.49 >More info Laer pretreat water control leaf discs Original data GEO bulk
244 npr1 sni1 brca2a 0.71 >More info 0.50 >More info npr1 sni1 water water seedling Original data GEO bulk
245 P.p 2.5hai 0.60 >More info 0.61 >More info At-Control roots Original data GEO bulk
246 Col whole leaf 5 dpi 0.59 >More info 0.62 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
247 bio4-1 mutant watered00µM biotin leaves -0.66 >More info -0.55 >More info bio4-1 mutant leaves leaves Original data GEO bulk
248 long 17-degree- 0.58 >More info 0.63 >More info control long Original data GEO bulk
249 coi1-16 ein2 sid2 ozone 0.72 >More info 0.49 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
250 sfr3 control 0.68 >More info 0.53 >More info WT control All aerial tissue Original data GEO bulk
251 Col whole leaf 3dpi 0.65 >More info 0.56 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
252 aerial organ callus inducing medium 96 h 0.58 >More info 0.63 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
253 aox1a(line) MLD stressed 0.53 >More info 0.67 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
254 Col-0 C2H4 24h 0.67 >More info 0.53 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
255 WT cold 0.70 >More info 0.50 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
256 CeO2 germinant -0.57 >More info -0.63 >More info Millipore Water germinant CeO2 seedling Original data
257 upf3 0.61 >More info 0.59 >More info WT whole plant Original data GEO bulk
258 short 17-degree- 0.58 >More info 0.62 >More info control short Original data GEO bulk
259 Methyl Jasmonate 1 h 0.50 >More info 0.70 >More info Mock 1 h Original data Basic hormone treatment of seedlings
260 arf2 mock 0.67 >More info 0.52 >More info Col mock Original data GEO bulk
261 WT+H2O2 0.51 >More info 0.68 >More info WT H2O2 Original data GEO bulk
262 Col-0 48 hpi 0.55 >More info 0.64 >More info Col-0 uninoculated Original data GEO bulk
263 sni1 0.60 >More info 0.59 >More info WT Original data GEO bulk
264 abh1 -ABA 0.54 >More info 0.65 >More info Col-0 -ABA Original data GEO bulk
265 Mutant arf2 (etiol) 0.67 >More info 0.52 >More info Col (etiol) Original data GEO bulk
266 WT resupplied Pi 4h 0.58 >More info 0.61 >More info WT complete seedlings Original data
267 long 14-degree- 0.62 >More info 0.57 >More info control long Original data GEO bulk
268 pmr4-1 control 0.54 >More info 0.65 >More info WT control uninoculated Original data GEO bulk
269 GST-overexpression seedlings control 0.72 >More info 0.47 >More info WT seedlings control Seedlings Original data
270 SA 4mM 0.65 >More info 0.54 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
271 Methyl Jasmonate 3 h 0.50 >More info 0.68 >More info Mock 3 h Original data Basic hormone treatment of seedlings
272 Col-0 V. longisporum-inoculated 48 hpi 0.63 >More info 0.55 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
273 Mutant siz1-3 (Drought) 0.63 >More info 0.55 >More info Col-0 (Drought) Original data GEO bulk
274 gpa1-4/agb1-2 ozone 2d -0.65 >More info -0.53 >More info Col ozone 2d ozone Original data GEO bulk
275 WT in -N 0.54 >More info 0.64 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
276 siz1-3 drought 0.63 >More info 0.55 >More info Col-0 drought Original data GEO bulk
277 root endodermis and quiescent center 40 mM NaCl 0.52 >More info 0.66 >More info root endodermis and quiescent center Original data GEO bulk
278 Col-0 drought 0.53 >More info 0.65 >More info Col-0 control Original data GEO bulk
279 ani1 T0.5 -0.72 >More info -0.46 >More info WT T0.5 root tissue Original data GEO bulk
280 24h volatiles Sm. R3089 -0.61 >More info -0.57 >More info 24h untreated whole seedling Original data GEO bulk
281 ulp1c ulp1d +Pto 0.48 >More info 0.70 >More info ulp1c ulp1d mock Original data GEO bulk
282 Fenclorim 24hr 0.49 >More info 0.69 >More info Acetone 24hr root Original data GEO bulk
283 Laer pretreat JA Flg22 1h 0.63 >More info 0.54 >More info Laer pretreat water control leaf discs Original data GEO bulk
284 rao1-2 3h antimycin A -0.74 >More info -0.43 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
285 RPL18 TuMV inoculated polysomal RNA 0.54 >More info 0.63 >More info mock inoculated polysomal RNA PO Original data GEO bulk
286 edr1 0 h powdery mildew 0.71 >More info 0.46 >More info Col-0 0 h powdery mildew Original data GEO bulk
287 GO5; 0h switch to ambient CO2 concentrations; -0.65 >More info -0.52 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
288 plant (tga2-5-6) 4h phytoprostane A1 0.67 >More info 0.50 >More info plant (tga2-5-6) 4h control Original data GEO bulk
289 npr1-3 DCA 48h 0.55 >More info 0.62 >More info npr1-3 MOCK 48h Original data GEO bulk
290 Light 3day wt -0.69 >More info -0.48 >More info 0h wt Original data
291 Tsu -Fe 24h Shoots 0.68 >More info 0.49 >More info Tsu +Fe 24h Shoots Original data GEO bulk
292 agb1 gpa1 +ABA LF -0.68 >More info -0.49 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
293 toc1-1-57hr 0.71 >More info 0.46 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
294 short 10-degree- 0.60 >More info 0.56 >More info control short Original data GEO bulk
295 8hr-pH4.5 0.60 >More info 0.56 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
296 Oxidative Stress 3 h (root) -0.68 >More info -0.48 >More info Stress mock 3 h (root) Original data Stress treatments
297 smg5-2 0.63 >More info 0.53 >More info WT whole plant Original data GEO bulk
298 bio4-1 mutant leaves 0.68 >More info 0.48 >More info WT leaves leaves Original data GEO bulk
299 gh3.5D uninoculated -0.60 >More info -0.56 >More info Col-0 48 hpi Original data GEO bulk
300 Tsu -Fe 48h Shoots 0.49 >More info 0.67 >More info Tsu +Fe 24h Shoots Original data GEO bulk
301 Laer pretreat GA Flg22 0h 0.71 >More info 0.45 >More info Laer pretreat water control leaf discs Original data GEO bulk
302 pho1 0.70 >More info 0.46 >More info Col2WT Original data GEO bulk
303 16h Col-0 0.74 >More info 0.42 >More info 00h Col-0 Original data GEO bulk
304 Salt Stress 24 h (shoot) 0.47 >More info 0.69 >More info Stress mock 24 h (shoot) Original data Stress treatments
305 coi1-PsmES4326-24hpi -0.44 >More info -0.72 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
306 plant (tga2-5-6) 4h OPDA 0.60 >More info 0.55 >More info plant (tga2-5-6) 4h control Original data GEO bulk
307 tmm1-inflorescence-tips 0.78 >More info 0.37 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
308 OE WRKY40.4 high light 0.56 >More info 0.59 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
309 AsAKiin11 T2 0.51 >More info 0.64 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
310 Bur-0-3h IAA 0.70 >More info 0.45 >More info Bur-0h IAA whole plant Original data GEO bulk
311 des1 water 0.60 >More info 0.55 >More info WT water water leaf Original data GEO bulk
312 D2O 0.57 >More info 0.58 >More info H2O seedling Original data GEO bulk
313 cs26 long day 0.69 >More info 0.46 >More info Leaves-WT-LD leaf Original data GEO bulk
314 Cambium 5 days NAA 0.65 >More info 0.50 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
315 Heat shock optimum 0.50 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
316 NJ15 0.44 >More info 0.71 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
317 CMV-WT 0.52 >More info 0.62 >More info Mock-At Aerial tissues Original data GEO bulk
318 plant (Col-0) 4h OPDA 0.53 >More info 0.61 >More info plant (Col-0) 4h control Original data GEO bulk
319 OPDA 4 h 0.53 >More info 0.61 >More info Col-0 Original data GEO bulk
320 RRE2 Chitin 0.46 >More info 0.68 >More info Chitin Original data GEO bulk
321 albino Ds13-2198-1 -0.72 >More info -0.42 >More info control Original data GEO bulk
322 cdkf:1-2 0.69 >More info 0.45 >More info wt seedling young seedlings Original data GEO bulk
323 root cells cortex 140mM NaCl 3 hours 0.69 >More info 0.45 >More info root cells cortex standard 1 hour root cells cortex Original data
324 GRX-overexpression seedlings control 0.71 >More info 0.43 >More info WT seedlings control Seedlings Original data GEO bulk
325 mkk2 24h BTH rep 0.64 >More info 0.49 >More info Col-0 24h BTH rep Original data GEO bulk
326 Phytoprostane A1 4 h 0.54 >More info 0.59 >More info Col-0 Original data GEO bulk
327 9 hr Hypoxia IP RNA 0.64 >More info 0.49 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
328 rcf1-1 cold 24h 0.51 >More info 0.62 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
329 NAA -AA 0.63 >More info 0.50 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
330 Mutant cry1 (High Light) -0.57 >More info -0.56 >More info Col-0 (High Light) Original data GEO bulk
331 til1-1 22C 0.53 >More info 0.60 >More info Col-0 22C Original data GEO bulk
332 cry1 high light -0.57 >More info -0.56 >More info Col-O high light Original data GEO bulk
333 IAA7mII over-expressor IAA Treated 0.44 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
334 Ibuprofen 3 h 0.56 >More info 0.56 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
335 elf3-7-16ºC 0.56 >More info 0.56 >More info WT-16ºC Original data GEO bulk
336 SAB 0.61 >More info 0.51 >More info COL seedling Original data
337 Flagellin 4 h (leaf) 0.48 >More info 0.64 >More info Mock 4 h (leaf) Original data Elicitor treatments
338 cop1 Seedling BL+ABA 0.48 >More info 0.64 >More info WT Seedling BL+ABA Original data GEO bulk
339 Col BTH 0.45 >More info 0.67 >More info Col rosettes Original data GEO bulk
340 scrm-D 0.68 >More info 0.43 >More info Col-0 WT whole seedling Original data GEO bulk
341 12h Col-0 0.55 >More info 0.56 >More info 00h Col-0 Original data GEO bulk
342 ein2-PsmES4326-24hpi -0.44 >More info -0.67 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
343 upf1 0.60 >More info 0.51 >More info WT whole plant Original data GEO bulk
344 miR 0h 0.57 >More info 0.54 >More info Col 0h Leaf Original data GEO bulk
345 WT 90-105 min Xanthomonas 0.57 >More info 0.54 >More info WT T0 Original data GEO bulk
346 Propiconazole 3 h 0.61 >More info 0.50 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
347 Salt Stress 24 h (root) 0.61 >More info 0.50 >More info Stress mock 24 h (root) Original data Stress treatments
348 Dex-rga(delta17) 2h GA4+DEX -0.49 >More info -0.62 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
349 WT 24h cold 0.50 >More info 0.60 >More info WT warm 24h cold entire aerial part Original data GEO bulk
350 root cells endodermis 140mM NaCl 3 hours 0.74 >More info 0.36 >More info root cells endodermis standard 1 hour root cells endodermis Original data
351 Col-0 Flg22 4h 0.52 >More info 0.58 >More info Col-0 H2O 4h Original data GEO bulk
352 1h light (+Lincomycin) 0.70 >More info 0.40 >More info 1h light (-Lincomycin) seedlings Original data GEO bulk
353 rpoTmp(line) MLD stressed 0.54 >More info 0.56 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
354 6-trichlorophenoxyacetic acid 3 h 0.56 >More info 0.54 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
355 camta1/2/3 24h cold 0.62 >More info 0.48 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
356 ckh1 CK200 0.51 >More info 0.59 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
357 P.syringae AvrRpt2 4 h (leaf) 0.55 >More info 0.55 >More info Mock 4 h (leaf) Original data Elicitor treatments
358 atsf1-2 mutant seedling 0.62 >More info 0.48 >More info Col-0 seedling seedlings Original data
359 aerial organ callus inducing medium 24h 0.56 >More info 0.54 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
360 sdg8-2 mutant 0.63 >More info 0.47 >More info wild type leaf Original data GEO bulk
361 nia1nia2noa1-2 0.59 >More info 0.51 >More info Col-0 whole seedlings Original data GEO bulk
362 Whole root - S 3H 0.43 >More info 0.67 >More info Whole root - S 0H Original data GEO bulk
363 del1-1 5dpi 0.77 >More info 0.32 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
364 A. thaliana-A. lyrata hybrid -0.55 >More info -0.54 >More info A. thaliana mature leaves before flowering Original data GEO bulk
365 col-5 DC3000 4h 0.55 >More info 0.54 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
366 opr3 JA 2 h 0.42 >More info 0.67 >More info opr3 0 h Original data GEO bulk
367 camta3-2 0.61 >More info 0.48 >More info WT Original data GEO bulk
368 OE-HRA1 2HS  0.71 >More info 0.38 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
369 Col-0-3h IAA 0.69 >More info 0.40 >More info Col-0-0h IAA whole plant Original data GEO bulk
370 brm-101 0.61 >More info 0.47 >More info Ler Original data GEO bulk
371 Col-0 WT HL 3h 0.51 >More info 0.57 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
372 camta2/3 warm 0.71 >More info 0.37 >More info WT warm entire aerial part Original data GEO bulk
373 20d after anthesis 0.58 >More info 0.50 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
374 penta Control 0.74 >More info 0.34 >More info Laer Control leaf discs Original data GEO bulk
375 E.orontii Infection 3 day 0.66 >More info 0.42 >More info Uninfection 3 day Original data Elicitor treatments
376 WT mitomycin C 0.70 >More info 0.38 >More info WT mock shoot apical meristem Original data
377 Col-0 mbs1-1 HL 0h 0.56 >More info 0.52 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
378 Col-0 +ABA LF 0.44 >More info 0.64 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
379 seedling 24h after Gamma WT 0.49 >More info 0.59 >More info seedling day 2 unirradiated WT 24h Original data
380 WT +elf18 2h 0.51 >More info 0.56 >More info WT untreated elf18 Original data GEO bulk
381 20h Col-0 0.62 >More info 0.45 >More info 00h Col-0 Original data GEO bulk
382 35S:RPS4 rrs1-11 8h -0.63 >More info -0.44 >More info 35S:RPS4 8h leaves Original data
383 camta1/2/3 warm 0.60 >More info 0.47 >More info WT warm entire aerial part Original data GEO bulk
384 anac017-2 H2O2 3h -0.69 >More info -0.38 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
385 Got7 UV 0.47 >More info 0.60 >More info Got7 mock UV seedling Original data
386 35S-MIF1 light grown 0.49 >More info 0.58 >More info Light-grown WT control Original data GEO bulk
387 csn3-1 light 0.51 >More info 0.55 >More info WT light Original data GEO bulk
388 ORS1 induced 0.60 >More info 0.46 >More info mock-induced rosette leaves Original data GEO bulk
389 irradiated leaf (cmt 1d) 0.69 >More info 0.37 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
390 gpa1 -ABA GC -0.51 >More info -0.55 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
391 Selenate (root) 0.61 >More info 0.45 >More info Ws (root) Original data GEO bulk
392 Root Selenate 0.61 >More info 0.45 >More info Root control 40 micromolar selenate Root Original data GEO bulk
393 aox1a:rpoTmp untreated 0.50 >More info 0.56 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
394 Dark 3day ivd 0.52 >More info 0.54 >More info 0h ivd Original data
395 WT 3h -P 0.64 >More info 0.42 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
396 inhibitor A Treated 0.42 >More info 0.64 >More info Negative Control Original data GEO bulk
397 rosettes WT drought 0.49 >More info 0.57 >More info rosettes WT watered Original data GEO bulk
398 atgsnor1-1-avrB-6h 0.42 >More info 0.64 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
399 aerial organ callus inducing medium 12 h 0.48 >More info 0.58 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
400 Dex-rga(delta17) 4h GA4+DEX -0.49 >More info -0.57 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
401 atmyc2 cop1 Seedling BL 0.48 >More info 0.58 >More info WT Seedling BL Original data GEO bulk
402 spx1 spx2 complete 0.54 >More info 0.51 >More info WT complete seedlings Original data
403 short 8-degree- 0.61 >More info 0.44 >More info control short Original data GEO bulk
404 Mutant nph4-1_arf19-1 0.60 >More info 0.45 >More info Col Original data GEO bulk
405 SCR-GR Time 12H Dex 0.63 >More info 0.42 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
406 SCR-GR Time 1H Dex 0.66 >More info 0.39 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
407 Col-0 overexpressing At1g54160 control 0.79 >More info 0.26 >More info WT no treatement Original data GEO bulk
408 At1g54160 ox 0.79 >More info 0.26 >More info Col-0 Original data GEO bulk
409 short 14-degree- 0.49 >More info 0.56 >More info control short Original data GEO bulk
410 cell culture 4 h phytoprostane A1 0.37 >More info 0.68 >More info cell culture 4 h control Original data GEO bulk
411 miR393 0h -0.43 >More info -0.62 >More info WT 0h Leaf tissue Original data GEO bulk
412 oas-a1.1 Cd 18h 0.48 >More info 0.57 >More info Cd 18h root Root Original data GEO bulk
413 A6 mutant 0.63 >More info 0.41 >More info WT rosette leaves Rosette leaves Original data GEO bulk
414 leaf rlt1-1rlt2-1 -0.59 >More info -0.45 >More info leaf Col-0 leaf Original data GEO bulk
415 hira-root -0.67 >More info -0.37 >More info WT-root root Original data
416 24h +Pi -0.71 >More info -0.33 >More info 24h -Pi root Original data GEO bulk
417 abi4-102 (II) 0.63 >More info 0.41 >More info Col (II) rosette Original data GEO bulk
418 pnp1-1 3h -P 0.54 >More info 0.50 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
419 Elevated CO2 expanding leaf 0.62 >More info 0.42 >More info Ambient CO2 expanding leaf expanding leaf Original data
420 GST 4 h (leaf) 0.37 >More info 0.67 >More info Mock 4 h (leaf) Original data Elicitor treatments
421 Col laser microdissected 5 dpi 0.47 >More info 0.57 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
422 msh1 recA3 untreated 0.47 >More info 0.57 >More info WT untreated above-ground parts Original data GEO bulk
423 Transgenic LEC2GR Seedling 1h Dex 0.48 >More info 0.56 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
424 current injection 0.37 >More info 0.67 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
425 seedling 1.5h after Gamma atm-1 0.44 >More info 0.60 >More info seedling day 1 unirradiated atm-1 1.5h Original data
426 Col-0 5dpi 0.64 >More info 0.39 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
427 hypoxic 0.52 >More info 0.51 >More info WT aerobic hypoxia Original data GEO bulk
428 pif3 Dark 0h -0.66 >More info -0.37 >More info WT Dark 0h etiolated seedling Original data GEO bulk
429 WT chitooctaose 0.55 >More info 0.48 >More info WT water Original data GEO bulk
430 Mutant bri1 -0.62 >More info -0.41 >More info Ws-2 Original data Comparison of plant hormone related mutant
431 Lipopolysaccaride4 h (leaf) 0.51 >More info 0.52 >More info Mock 4 h (leaf) Original data Elicitor treatments
432 WT+sucrose 0.49 >More info 0.54 >More info WT+no sugars rosette leaves Original data GEO bulk
433 rao2 H2O2 3h -0.35 >More info -0.68 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
434 WT seedlings MV 0.43 >More info 0.60 >More info WT seedlings control Seedlings Original data GEO bulk
435 TiO2 germinant -0.60 >More info -0.42 >More info Millipore Water germinant TiO2 seedling Original data
436 rosettes myoox drought 0.54 >More info 0.48 >More info rosettes myoox watered Original data GEO bulk
437 root cells cortex 140mM NaCl 20 hours 0.60 >More info 0.42 >More info root cells cortex standard 1 hour root cells cortex Original data
438 Col-0 RNAi-MBS2/mbs1-1 HL 0h 0.64 >More info 0.38 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
439 WT +Pep2 2h 0.67 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
440 ARR21C-ox 0.63 >More info 0.39 >More info Col-0 Original data ARR21C overexpression
441 IRP1-OE-Ctrl--root 0.52 >More info 0.50 >More info COL-0-Ctrl--root root Original data
442 Col whole leaf 6hpi 0.49 >More info 0.53 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
443 JMJ24 knockout 0.61 >More info 0.40 >More info WT Original data GEO bulk
444 Heat shock 20%Inhibition 0.58 >More info 0.43 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
445 JA 3h 0.28 >More info 0.73 >More info EtOH 3h 3hr Original data GEO bulk
446 COL-0-Fe--shoot 0.46 >More info 0.55 >More info COL-0-Ctrl--shoot shoot Original data
447 35S:LOB-GR DEX 0.57 >More info 0.43 >More info Col DEX dexamethasone seedling Original data GEO bulk
448 irradiated leaf (WT 1d) 0.59 >More info 0.41 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
449 mbd6 mutant thaliana 10-day-old seedling 0.61 >More info 0.39 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
450 FarRed Light 4 h 0.63 >More info 0.37 >More info White Light 4 h Original data Light treatments
451 tor mutant 0.59 >More info 0.41 >More info WT (Col) none seedlings Original data GEO bulk
452 Mutant ein2(leaf) -0.57 >More info -0.43 >More info Col-0 (leaf) Original data GEO bulk
453 root cells endodermis 140mM NaCl 8 hours 0.70 >More info 0.30 >More info root cells endodermis standard 1 hour root cells endodermis Original data
454 cca1-lhy before light -0.75 >More info -0.25 >More info before light whole seedlings Original data GEO bulk
455 tt4 0.62 >More info 0.38 >More info Col-0 aerial part Original data
456 OE-HRA1 NS  0.63 >More info 0.37 >More info Col-0NS 2 h non-stress (2NS) 7-day-old seedlings Original data
457 AAF-OX 0.65 >More info 0.35 >More info Col-0 Rosette leaf Original data GEO bulk
458 ubc13A-es -0.53 >More info -0.47 >More info Col-es root Original data GEO bulk
459 FOX line K16331 0.47 >More info 0.53 >More info empty vector control (T3) FOX lines Original data GEO bulk
460 Laer pretreat JA Flg22 0h 0.46 >More info 0.54 >More info Laer pretreat water control leaf discs Original data GEO bulk
461 WT NAA 2h -0.43 >More info -0.57 >More info WT 0h Leaf tissue Original data GEO bulk
462 6h +Pi -0.42 >More info -0.58 >More info 6h -Pi root Original data GEO bulk
463 amiRAP hypoxic -0.37 >More info -0.63 >More info hypoxic hypoxia Original data GEO bulk
464 WT-Dry 0.44 >More info 0.56 >More info WT-CK dehydration treatment 1h Original data
465 total mRNA eif3k 0.50 >More info 0.49 >More info total mRNA WT aerial part Original data GEO bulk
466 Mutant nph4-1 0.51 >More info 0.48 >More info Col Original data GEO bulk
467 pad4-PsmES4326-24hpi -0.45 >More info -0.54 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
468 WT cold 0.38 >More info 0.61 >More info WT control All aerial tissue Original data GEO bulk
469 Col leaves 120h LT 0.60 >More info 0.38 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
470 root cells cortex 140mM NaCl 8 hours 0.58 >More info 0.40 >More info root cells cortex standard 1 hour root cells cortex Original data
471 SPT4-R3 seedlings0 DAS 0.51 >More info 0.47 >More info Col-0 seedlings0 DAS seedlings Original data
472 SIZ 0.65 >More info 0.33 >More info COL seedling Original data
473 swn-7 -0.54 >More info -0.44 >More info Col whole plant Original data GEO bulk
474 gpa1 +ABA GC -0.56 >More info -0.42 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
475 t-zeatin 0.5 h -0.26 >More info -0.72 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
476 long 12-degree- 0.48 >More info 0.50 >More info control long Original data GEO bulk
477 Atwrky63 -0.74 >More info -0.23 >More info Col0 none leaf Original data GEO bulk
478 S14-150 0.55 >More info 0.42 >More info wt Original data GEO bulk
479 Norflurazon 0.56 >More info 0.41 >More info Col-0 Original data GEO bulk
480 cs26 short-day -0.57 >More info -0.40 >More info Leaves-WT-SD leaf Original data GEO bulk
481 dor control 0.62 >More info 0.35 >More info WT control Original data GEO bulk
482 9m.KCl 0.52 >More info 0.45 >More info To. KCl 14 day old Roots Original data GEO bulk
483 Norflurazon 0.56 >More info 0.41 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
484 WT 1mM phosphate 8 hours. -0.51 >More info -0.46 >More info WT control (not supplemented). Original data
485 KAN1-GR 30min 0.58 >More info 0.39 >More info KAN1-GR 0min Original data GEO bulk
486 G3P 0.82 >More info 0.15 >More info Mock distal leaves Original data GEO bulk
487 Cycloheximide 3 h 0.43 >More info 0.54 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
488 Octopus overexpressor 35SDYG25 0.46 >More info 0.51 >More info WS Original data GEO bulk
489 wt systemic wounding 0.45 >More info 0.52 >More info wt control leaves Original data GEO bulk
490 9 hr Hypoxia 1 hr recovery IP RNA 0.44 >More info 0.53 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
491 light-hs 0.56 >More info 0.40 >More info light-control seedling Original data
492 C24-3h IAA 0.58 >More info 0.38 >More info C24-0h IAA whole plant Original data GEO bulk
493 Mutant iaa5_6_19 0.31 >More info 0.65 >More info Col Original data GEO bulk
494 pmr4-1 powdery mildew 0.39 >More info 0.57 >More info WT powdery mildew uninoculated Original data GEO bulk
495 des1 Na2S -0.64 >More info -0.31 >More info WT Na2S Na2S leaf Original data GEO bulk
496 WT leaves - Fe 0.60 >More info 0.35 >More info WT leaves + Fe Leaves Original data GEO bulk
497 Bur-0-1h IAA 0.59 >More info 0.36 >More info Bur-0h IAA whole plant Original data GEO bulk
498 GO5; harvested 8h continiously maintained in high
CO2;		 -0.45 >More info -0.50 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
499 toc1-1-65hr 0.68 >More info 0.26 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
500 pnp1-1 1wk -P 0.67 >More info 0.27 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
501 seedlings +5AC 0.53 >More info 0.41 >More info control seedlings 10-day old whole seedling Original data GEO bulk
502 tunicamycin -0.51 >More info -0.43 >More info DMF Original data GEO bulk
503 ALC Toc1 light-light EtOH -0.65 >More info -0.29 >More info Col light-light EtOH 2.5% ethanol Original data GEO bulk
504 Whole root - low pH 12H 0.53 >More info 0.41 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
505 MG132 3 h 0.59 >More info 0.35 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
506 scl3 0.75 >More info 0.19 >More info Col-0 whole root Original data GEO bulk
507 Mock pft1 leaf 0.37 >More info 0.57 >More info Mock Col-0 leaf water leaf Original data GEO bulk
508 Nicotinamide-53hr 0.42 >More info 0.52 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
509 JA 0.24 >More info 0.70 >More info Col-0 mock Whole seedling Original data GEO bulk
510 35S:VND7-VP16-GR+CHX 0.33 >More info 0.61 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
511 control leaf (cmt 5d) 0.35 >More info 0.59 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
512 Differentiation 24h 0.54 >More info 0.39 >More info Differentiation 0h leaves Original data
513 35S:GIF -0.57 >More info -0.36 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
514 sid2-1 warm -0.36 >More info -0.57 >More info WT warm entire aerial part Original data GEO bulk
515 bZIP1ko mutant N+Light+ 0.68 >More info 0.24 >More info WT-sib N+Light+ whole plant Original data GEO bulk
516 mutant acs6E (single mutant) 0.53 >More info 0.39 >More info col control (single mutant) Original data GEO bulk
517 Col-7 Sucrose 0.39 >More info 0.53 >More info col-7 Original data GEO bulk
518 AsAKiin11 T1 0.37 >More info 0.55 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
519 bbx24 in Simulated Shade -0.70 >More info -0.22 >More info WT in simulated shade shade seedling Original data
520 P-chlorophenoxy- isobutyric acid 3 h 0.50 >More info 0.42 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
521 Cd 24h root -0.41 >More info -0.51 >More info WT-Untreated Shoot Original data GEO bulk
522 dense canopy 0.41 >More info 0.51 >More info single (control) petiole Original data GEO bulk
523 Col-O high light 0.29 >More info 0.63 >More info Col-O bule light Original data GEO bulk
524 Whole root - low pH 24H 0.40 >More info 0.51 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
525 35S::KLU 0.33 >More info 0.58 >More info WT Shoot Original data
526 L2.5 mutant -0.67 >More info -0.23 >More info Wt Original data GEO bulk
527 WUS-GR DEX Cycloheximide DEX -0.64 >More info -0.26 >More info WUS-GR DEX Cycloheximide Cycloheximide Dexamethasone Original data GEO bulk
528 WT Shoot-Pi 0.52 >More info 0.38 >More info WT Shoot+Pi shoots Original data GEO bulk
529 0h light (+Lincomycin) 0.64 >More info 0.26 >More info 0h light (-Lincomycin) seedlings Original data GEO bulk
530 naxillin 3h 0.50 >More info 0.40 >More info before treatment naxillin root Original data GEO bulk
531 Methyl Jasmonate 0.5 h 0.25 >More info 0.65 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
532 Stem wox4 -0.36 >More info -0.54 >More info Stem Col first internode of stem Original data GEO bulk
533 Mutant iaa17-6 0.50 >More info 0.39 >More info Col Original data GEO bulk
534 Col-0 INA 6d 0.63 >More info 0.26 >More info Col-0 MOCK 6d Original data GEO bulk
535 WT Red light 1h 0.80 >More info 0.09 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
536 root cells endodermis 140mM NaCl 48 hours 0.65 >More info 0.24 >More info root cells endodermis standard 1 hour root cells endodermis Original data
537 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.79 >More info -0.10 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
538 35:SUB1A 0.38 >More info 0.51 >More info WT whole seedling Original data GEO bulk
539 amiR-tor induced 3d 0.39 >More info 0.50 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
540 WT+chitooctaose 0.32 >More info 0.57 >More info WT+water chitooctaose seedlings Original data GEO bulk
541 Wounding Stress3 h (root) -0.56 >More info -0.32 >More info Stress mock 3 h (root) Original data Stress treatments
542 chl1-9 10mM NH4NO3 -0.54 >More info -0.34 >More info col 10mM NH4NO3 Root Original data
543 root cells stele 140mM NaCl 3 hours 0.56 >More info 0.32 >More info root cells stele standard 1 hour root cells stele Original data
544 rao1-1 3h antimycin A -0.61 >More info -0.27 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
545 Ws seedlings 0.69 >More info 0.19 >More info ged1 seedlings Original data GEO bulk
546 ged1 seedlings -0.69 >More info -0.19 >More info Ws seedlings Original data GEO bulk
547 express RfBP -0.68 >More info -0.19 >More info WT green part of the whole plant Original data GEO bulk
548 sav1-1 light 0.62 >More info 0.25 >More info Col-0 light seedlings Original data GEO bulk
549 KCl germinant -0.59 >More info -0.28 >More info Millipore Water germinant KCl seedling Original data
550 P35S:rGRF3 0.50 >More info 0.37 >More info WS Original data GEO bulk
551 plant (Col-0) 4h phytoprostane A1 0.36 >More info 0.51 >More info plant (tga2-5-6) 4h control Original data GEO bulk
552 Col-0 +ABA GC 0.35 >More info 0.52 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
553 shoot-10 μM DEX- 3 hr 0.37 >More info 0.50 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
554 HSP90 Reduced hsp90.2 0.56 >More info 0.30 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
555 Homozygous-AtcesA6 0.30 >More info 0.56 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
556 MYB29 OE 0.30 >More info 0.56 >More info WT for MYB29/76 Original data GEO bulk
557 Mutant ufo-1(flower) 0.60 >More info 0.26 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
558 shoots WT 0uM Fe 0.74 >More info 0.12 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
559 SCR-GR Time 3H Dex 0.63 >More info 0.23 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
560 rpl24 total 0.53 >More info 0.32 >More info WT total seedling shoot/aerial seedling Original data
561 C2 leaf-drought 0.32 >More info 0.53 >More info C2 leaf-well watered Original data GEO bulk
562 wavy 0.29 >More info 0.56 >More info WT Original data GEO bulk
563 pab polysome 0.33 >More info 0.52 >More info WT polysome seedling shoot/aerial seedling Original data
564 Shoot -P -0.75 >More info -0.10 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
565 ALC Toc1 light-light Mock -0.61 >More info -0.24 >More info Col light-light Mock no ethanol Original data GEO bulk
566 penta Pst DC3000 12hpi 0.59 >More info 0.26 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
567 rsa3-1 Na 24h 0.51 >More info 0.33 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
568 sps1 -0.52 >More info -0.32 >More info WT seedling Original data GEO bulk
569 WT+mannitol 0.67 >More info 0.17 >More info WT+no sugars rosette leaves Original data GEO bulk
570 FarRed Light 45min -0.28 >More info -0.56 >More info White Light 45min Original data Light treatments
571 root cells stele 140mM NaCl 8 hours 0.61 >More info 0.23 >More info root cells stele standard 1 hour root cells stele Original data
572 ms1 unpollinated -0.62 >More info -0.22 >More info WT 8h-pollinated pistil Original data GEO bulk
573 shoot control pSultr2:2 -0.73 >More info -0.11 >More info shoot control total Original data GEO bulk
574 Col-0 24hpi A. brassicicola 0.82 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
575 rdr6-11 ein5-1 ski2-3 -0.63 >More info -0.20 >More info Col-0 aerial tissue Original data
576 prmt5-5 -0.66 >More info -0.17 >More info WT Col continuous light Aerial tissue Original data GEO bulk
577 chito-octamer 0.29 >More info 0.54 >More info Col Mock Original data GEO bulk
578 fls1-3 0.33 >More info 0.50 >More info Col-0 Rosette leaves Original data
579 Hydrogen Peroxide 500 uM 0.21 >More info 0.62 >More info Control RB and PER Hydrogen Peroxide Original data
580 +GA-60mins -0.56 >More info -0.26 >More info -60mins whole plant Original data GEO bulk
581 phr1 phl1 Root-Pi 0.32 >More info 0.50 >More info WT Shoot+Pi roots Original data GEO bulk
582 agb1 gpa1 -ABA GC -0.28 >More info -0.54 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
583 OH1 0.28 >More info 0.54 >More info Col-0 leaves Original data GEO bulk
584 cov1 cov2 stem Base 0.57 >More info 0.25 >More info WT stem Base stem Base Original data GEO bulk
585 Lip0 UV 0.73 >More info 0.09 >More info Lip0 mock UV seedling Original data
586 toc1-1-61hr 0.61 >More info 0.21 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
587 gtl1 0.54 >More info 0.27 >More info WT trichome Original data GEO bulk
588 gul2-1 mutant 0.52 >More info 0.29 >More info WT 7 day-old whole seedlings Original data
589 gtl1-1 0.54 >More info 0.27 >More info WT trichome Original data GEO bulk
590 pistil 8.0HAP 0.65 >More info 0.16 >More info unpollinated pistil pistil Original data GEO bulk
591 abi4-102 (I) 0.60 >More info 0.20 >More info Col (I) rosette Original data GEO bulk
592 seedling 3h after Gamma WT 0.55 >More info 0.25 >More info seedling day 1 unirradiated WT 3h Original data
593 penta mutant (higher order mutant) -0.50 >More info -0.30 >More info col control (higher order mutant) Original data GEO bulk
594 iae1 -0.54 >More info -0.26 >More info B179 Original data GEO bulk
595 vte2 leaves 48h LT 0.56 >More info 0.24 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
596 Starch sheath 5 days MS incubation 0.25 >More info 0.55 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
597 +1.6 mM Tween 20 1 h. 0.19 >More info 0.61 >More info +distilled water 1 h. Original data GEO bulk
598 root cells endodermis 140mM NaCl 20 hours 0.55 >More info 0.24 >More info root cells endodermis standard 1 hour root cells endodermis Original data
599 WT-drought 0.53 >More info 0.26 >More info WT-control leaf Original data
600 Shoot P recovery 0.61 >More info 0.18 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
601 root cells endodermis 140mM NaCl 32 hours 0.59 >More info 0.20 >More info root cells endodermis standard 1 hour root cells endodermis Original data
602 PRR5-VP 6h light on 0.52 >More info 0.27 >More info WT 6h light on whole plant Original data GEO bulk
603 C58 35dpi 0.63 >More info 0.16 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
604 glk1 glk2 GLK1-GR +DEX 24h -0.59 >More info -0.20 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
605 ced1 -0.27 >More info -0.52 >More info WT PEG 6hr seedlings Original data GEO bulk
606 gpa1-4/agb1-2 clean-air 2d 0.26 >More info 0.53 >More info Col clean-air 2d clean-air Original data GEO bulk
607 35S::HRE2 Aerobic -0.57 >More info -0.22 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
608 GV3101 6dpi 0.59 >More info 0.19 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
609 pepr1-1 Pepr2-3 untreated 0.60 >More info 0.18 >More info WT untreated untreated Original data GEO bulk
610 Cold Stress 24 h (shoot) 0.23 >More info 0.55 >More info Stress mock 24 h (shoot) Original data Stress treatments
611 rosette Light Wounded 0.13 >More info 0.65 >More info rosette Light Control Original data GEO bulk
612 siliques AtHb1 control 0.26 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
613 agb1 +ABA LF -0.57 >More info -0.21 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
614 C24 UV1 -0.64 >More info -0.13 >More info C24 mock UV seedling Original data
615 ex1ex2flu dark 8hours/30 minute light -0.66 >More info -0.10 >More info col dark 8hours/30 minute light Original data GEO bulk
616 Red Light 45min -0.65 >More info -0.11 >More info White Light 45min Original data Light treatments
617 DUO1 induced 6h -0.52 >More info -0.24 >More info 6hr-not-induced whole plant Original data GEO bulk
618 tumour 0.62 >More info 0.14 >More info non-tumor tumour Original data GEO bulk
619 MPK6 ox Shoot Hypoxia 0.67 >More info 0.09 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
620 toc1-1-81hr 0.58 >More info 0.18 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
621 atmyc2 Seedling BL 0.08 >More info -0.83 >More info WT Seedling BL Original data GEO bulk
622 Callus 0.58 >More info 0.16 >More info Control for tissue data callus Original data GEO bulk
623 sid2-2 mock 0.64 >More info 0.10 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
624 arr10 arr12 -0.61 >More info -0.13 >More info DMSO--WT DMSO roots Original data GEO bulk
625 cys-c1 leaf -0.66 >More info -0.08 >More info Leaf-WT leaves Original data GEO bulk
626 syd-2 0.51 >More info 0.23 >More info Ler Original data GEO bulk
627 MYB46-GR DEX 0.15 >More info 0.59 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
628 ex1 flu dark 8hours/30 minute light -0.54 >More info -0.19 >More info col dark 8hours/30 minute light Original data GEO bulk
629 Mutant ag-12(flower) 0.60 >More info 0.13 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
630 dcl1-7 0.57 >More info 0.16 >More info Ler Original data GEO bulk
631 MYB76 OE 0.16 >More info 0.57 >More info WT for MYB29/76 Original data GEO bulk
632 P. infestans 6 h (leaf) 0.87 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
633 Full AC2 T1 -0.50 >More info -0.22 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
634 eif3h 0.51 >More info 0.21 >More info WT Original data GEO bulk
635 HairpinZ 4 h (leaf) 0.75 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
636 light -0.54 >More info -0.18 >More info dark light seedling Original data GEO bulk
637 C58 6dpi 0.63 >More info 0.09 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
638 tt4 -0.54 >More info -0.18 >More info WT aerial region Original data GEO bulk
639 Ambient CO2 LIMITING N DAY 0.50 >More info 0.22 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
640 rosettes drought 0.09 >More info 0.63 >More info rosettes watered Original data GEO bulk
641 ptpks2 0.10 >More info 0.62 >More info Col-WT leaves Original data GEO bulk
642 bri1-5 mutant -0.66 >More info -0.05 >More info WT 7 day-old whole seedlings Original data
643 Sha-3h IAA 0.54 >More info 0.17 >More info Sha-0h IAA whole plant Original data GEO bulk
644 Uniconazole 12 h 0.55 >More info 0.16 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
645 Te CA -0.51 >More info -0.20 >More info Col CA Leaves Original data
646 ABA control 0.21 >More info 0.50 >More info No ABA control Original data GEO bulk
647 chl1-5 10mM NH4NO3 -0.54 >More info -0.16 >More info col 10mM NH4NO3 Root Original data
648 LFYGR -0.66 >More info -0.04 >More info WT shoot apices Original data GEO bulk
649 seed germinating in countinuous light 24h SL 0.03 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
650 OE WRKY40.4 -0.58 >More info -0.12 >More info OE WRKY40.4 none leaf Original data GEO bulk
651 pvip1 pvip2 seedling 0.72 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
652 ABA JA 3h 0.08 >More info 0.62 >More info EtOH 3h 3hr Original data GEO bulk
653 Tsu-1 -Fe 24h 0.20 >More info 0.50 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
654 Tsu -Fe 24h Roots 0.20 >More info 0.50 >More info Tsu +Fe 24h Roots Original data GEO bulk
655 col 24h4c set4 0.16 >More info 0.53 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
656 Col-0 Mock Shade -0.51 >More info -0.18 >More info Col-0 Mock WL seedlings Original data
657 Aerobic e1 ate2 0.58 >More info 0.11 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
658 CHLD reduction 0.54 >More info 0.14 >More info Col-0 dex green tissue Original data GEO bulk
659 F1 whole seedlings root 0.56 >More info 0.12 >More info Col whole seedlings root Seedlings Original data GEO bulk
660 Uniconazole 3 h 0.51 >More info 0.17 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
661 des1.1 0.14 >More info 0.54 >More info Leaves-WT leaf Original data GEO bulk
662 shoot control pKAT1 -0.59 >More info -0.09 >More info shoot control total Original data GEO bulk
663 root columella root cap -S -0.50 >More info -0.18 >More info root columella root cap pH5.7 Original data GEO bulk
664 bZIP1ko mutant N-Light- -0.58 >More info -0.10 >More info WT-sib N-Light- whole plant Original data GEO bulk
665 dcl2-1 0.18 >More info 0.50 >More info Col-0 Original data GEO bulk
666 iron minus 1 h -0.52 >More info -0.15 >More info iron +1 h root Original data GEO bulk
667 chito-tetramer 0.14 >More info 0.53 >More info Col Mock Original data GEO bulk
668 nas4x leaves + Fe 0.69 >More info -0.02 >More info WT leaves + Fe Leaves Original data GEO bulk
669 12h-DC3000 hrpA -0.56 >More info -0.10 >More info 12h-DC3000 leaves Original data GEO bulk
670 elf3-7-23ºC 0.10 >More info 0.56 >More info WT-23ºC Original data GEO bulk
671 CCA1-ox 6am non-polysomal 0.15 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
672 elevated CO2 low Mg shoot 0.58 >More info 0.08 >More info atmospheric CO2 low Mg shoot Shoot Original data
673 WT Shoot Hypoxia 0.51 >More info 0.14 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
674 SA Treated 0.57 >More info 0.08 >More info Water Original data GEO bulk
675 AtMYB30-ox 2-4h Xanthomonas 0.54 >More info 0.10 >More info WT 2-4h Xanthomonas Original data GEO bulk
676 iron minus 0 h 0.51 >More info 0.13 >More info iron +0 h root Original data GEO bulk
677 bam7 untreated -0.50 >More info -0.14 >More info WT untreated none shoot Original data
678 Dark 6h hml -0.62 >More info -0.02 >More info 0h hml Original data
679 pad4-est1b-1-doublemutant 0.65 >More info -0.01 >More info pad4-mutant developed rosette leaves Original data GEO bulk
680 15m.KNO3 0.51 >More info 0.13 >More info To. KNO3 14 day old Roots Original data GEO bulk
681 Dark 6h wt -0.62 >More info -0.02 >More info 0h wt Original data
682 npr1-3 MOCK 48h -0.12 >More info -0.52 >More info Col-0 MOCK 48h Original data GEO bulk
683 Col PSTDC3000 24h 0.76 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
684 Dark 1day wt -0.69 >More info 0.06 >More info 0h wt Original data
685 4tga mock 0.62 >More info 0.00 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
686 Kas -Fe 48h Shoots 0.54 >More info 0.07 >More info Kas +Fe 24h Shoots Original data GEO bulk
687 Dark 1day hml -0.66 >More info 0.05 >More info 0h hml Original data
688 iron minus 24h -0.52 >More info -0.08 >More info iron +24h root Original data GEO bulk
689 cngc1-3 0.10 >More info 0.50 >More info Col-0 root Original data GEO bulk
690 ABA SA 3h 0.03 >More info 0.57 >More info EtOH 3h 3hr Original data GEO bulk
691 hda9 dryseed 0.52 >More info 0.07 >More info Col dryseed dry seeds Original data
692 ABA 1 h 0.05 >More info 0.54 >More info Mock 1 h Original data Basic hormone treatment of seedlings
693 triplod male excess 0.51 >More info 0.08 >More info tetraploid Original data GEO bulk
694 Rsch 8h 0.08 >More info 0.51 >More info Rsch CA Leaves Original data
695 vte2 leaves 120h LT 0.53 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
696 Ws-2 high light 0.03 >More info 0.54 >More info Ws-2 low light Original data GEO bulk
697 HSP90 Reduced Salk hsp90.2 0.55 >More info 0.01 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
698 Rose Bengal 0.5 uM 0.03 >More info 0.53 >More info Control RB and PER Rose Bengal Original data
699 MYB51 OE -0.60 >More info 0.04 >More info WT for ATR1/MYB51 Original data GEO bulk
700 RRE1 -0.51 >More info -0.03 >More info Col C Original data GEO bulk
701 upf2i -0.50 >More info -0.04 >More info WT whole plant Original data GEO bulk
702 vtc2-1 -0.52 >More info -0.02 >More info Col-0 whole plant Original data GEO bulk
703 HSP90 Reduced Salk hsp90.3 0.55 >More info -0.01 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
704 60m light -0.06 >More info 0.60 >More info before light whole seedlings Original data GEO bulk
705 Root -P -0.52 >More info -0.00 >More info Root Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
706 calcicole ecotype Cal-0 0.55 >More info -0.03 >More info Col-4 1 mM CaCl2 Original data GEO bulk
707 gpa1 -ABA LF 0.02 >More info 0.50 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
708 Polysomal RNA 35S:HF-RPL18 0.53 >More info -0.02 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
709 agb1 -ABA GC 0.07 >More info -0.58 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
710 lec2-1 12 DAF Seed -0.54 >More info 0.04 >More info WT (WS) 12 DAF Seed developing seeds dissected from sliques Original data
711 Heat and anoxia -0.02 >More info 0.52 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
712 Dark 1day ivd -0.55 >More info 0.06 >More info 0h ivd Original data
713 Homozygous-AtcesA4 -0.04 >More info 0.53 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
714 root longitudinal zone-2 -Fe -0.07 >More info 0.54 >More info root longitudinal zone-2 standard Original data GEO bulk
715 eto1-4 + AVG -0.53 >More info 0.09 >More info eto1-4 whole seedling Original data GEO bulk
716 Shoot apex inflorescence (after bolting) -0.29 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
717 opr3 OPDA 2 h -0.19 >More info 0.55 >More info opr3 0 h Original data GEO bulk
718 Atss3 Dark4 0.50 >More info -0.14 >More info Atss3 Dark0.5 Original data GEO bulk
719 Red/FR Light45min -0.39 >More info 0.75 >More info FarRed Light 45min Original data Light treatments
720 WT leaf-drought -0.14 >More info 0.50 >More info WT leaf-well watered Original data GEO bulk
721 Mh0 UV -0.53 >More info 0.18 >More info Mh0 mock UV seedling Original data
722 anac017-2 water 3h -0.51 >More info 0.17 >More info WT water 3h 3h_water Original data GEO bulk
723 hai1-2 low water potential -0.59 >More info 0.26 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
724 bri1-116 -0.40 >More info 0.73 >More info Col seedling Original data GEO bulk
725 WT 3H Cold -0.54 >More info 0.32 >More info WT control Original data GEO bulk
726 Light 3day hml -0.65 >More info 0.46 >More info 0h hml Original data
727 rao2 water 3h 0.51 >More info -0.32 >More info WT water 3h 3h_water Original data GEO bulk
728 iron minus 6 h -0.61 >More info 0.43 >More info iron +6 h root Original data GEO bulk
729 high R/FR JA spray -0.51 >More info 0.48 >More info high R/FR mock spray high R/FR JA spray Original data GEO bulk