4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on pnp1-1 1wk +P
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List of experiments correlated with "pnp1-1 1wk +P"  Help Download transcriptome of top 30
Score Experiment Correlation from
pnp1-1 1wk +P		 Correlation to
pnp1-1 1wk +P		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 pnp1-1 1wk +P 1.00 >More info 1.00 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
2 pnp1-1 1wk -P 0.87 >More info 0.83 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
3 pnp1-1 3h +P 0.80 >More info 0.81 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
4 pnp1-1 3h -P 0.75 >More info 0.78 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
5 ceh1 mutant 0.75 >More info 0.76 >More info Parent line Original data
6 ice1 control 0.69 >More info 0.78 >More info WT control Original data GEO bulk
7 msh1 albino 0.71 >More info 0.68 >More info WT aerial part Original data GEO bulk
8 shoots bhlh100/101 0uM Fe 0.69 >More info 0.70 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
9 B.cinerea 18 h infection 0.64 >More info 0.74 >More info Mock 18 h Original data Botrytis cinerea infection
10 Botrytis cinerea 18h 0.64 >More info 0.74 >More info control 18h Original data GEO bulk
11 ASL9-ox -0.67 >More info -0.70 >More info WT aerial parts of seedlings Original data GEO bulk
12 ein2-1 9 hpi A. brassicicola 0.66 >More info 0.70 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
13 ice1 6H Cold 0.65 >More info 0.71 >More info WT 6H Cold Original data GEO bulk
14 ice1 24H Cold 0.65 >More info 0.70 >More info WT 24H Cold Original data GEO bulk
15 Col-0 9 hpi A. brassicicola 0.61 >More info 0.74 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
16 Botrytis cinerea 48h 0.66 >More info 0.68 >More info control 48h Original data GEO bulk
17 del1-1 mutant 5d uninfected 0.62 >More info 0.71 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
18 WT 2-4h Xanthomonas 0.55 >More info 0.78 >More info WT T0 Original data GEO bulk
19 rcf1-1 cold 12h 0.59 >More info 0.73 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
20 WT Col-0 Bgh inoculated 0.59 >More info 0.73 >More info WT Col-0 Un-inoculated Original data GEO bulk
21 anac017-1 H2O2 3h -0.67 >More info -0.64 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
22 hrcC 0.59 >More info 0.72 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
23 sni1 0.62 >More info 0.68 >More info WT Original data GEO bulk
24 Elevated CO2 fully expanded leaf 0.60 >More info 0.70 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
25 col-5 hrpA 12h 0.59 >More info 0.71 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
26 ataf1-1 mutant Col-0 Bgh inoculated 0.59 >More info 0.71 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
27 sta1 0.63 >More info 0.66 >More info WT Original data GEO bulk
28 Shoot -Cs 0.50 >More info 0.79 >More info Control-shoot Original data GEO bulk
29 smg7b-1 0.63 >More info 0.66 >More info WT whole plant Original data GEO bulk
30 hrpA 7h 0.56 >More info 0.73 >More info Mock 7h hrpA Original data GEO bulk
31 DC3000 24h 0.58 >More info 0.71 >More info Mock 24h DC3000 Original data GEO bulk
32 ice1 3H Cold 0.68 >More info 0.60 >More info WT 3H Cold Original data GEO bulk
33 AvrRpt2 Col-0 6hpi 0.57 >More info 0.71 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
34 Col whole leaf 7dpi 0.61 >More info 0.66 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
35 Col-0-avrB-6h 0.52 >More info 0.75 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
36 IMI 4mM 0.64 >More info 0.63 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
37 Col-Luc WT 3h antimycin A 0.61 >More info 0.66 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
38 HopZ1a treated 0.56 >More info 0.71 >More info col Original data GEO bulk
39 bio4-1 mutant watered00µM biotin leaves -0.54 >More info -0.72 >More info bio4-1 mutant leaves leaves Original data GEO bulk
40 HopZ1a treated ulp1c ulp1d 0.56 >More info 0.70 >More info col Original data GEO bulk
41 Flagellin 4 h (leaf) 0.55 >More info 0.71 >More info Mock 4 h (leaf) Original data Elicitor treatments
42 mpk6-ko Flg22 4h 0.53 >More info 0.73 >More info mpk6-ko H2O 4h Original data GEO bulk
43 flu over-tAPX 0.52 >More info 0.74 >More info WT Col Original data GEO bulk
44 GST NPP1 4 h (leaf) 0.57 >More info 0.69 >More info Mock 4 h (leaf) Original data Elicitor treatments
45 hrpA fliC 7h 0.54 >More info 0.71 >More info Mock 7h hrpA fliC Original data GEO bulk
46 myb3 myb3r4d 0.54 >More info 0.71 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
47 mkk1/mkk2 24h BTH rep 0.61 >More info 0.64 >More info Col-0 24h BTH rep Original data GEO bulk
48 Elevated CO2 AMPLE N DAY 0.58 >More info 0.66 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
49 pvip1 pvip2 0.54 >More info 0.70 >More info Col-0 whole rosettes Original data GEO bulk
50 albino Ds13-2198-1 -0.59 >More info -0.64 >More info control Original data GEO bulk
51 WT 1wk -P 0.63 >More info 0.60 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
52 LTN008-2 aza-dc 0.62 >More info 0.61 >More info LTN012-2 Mock Original data
53 col-5 DC3000 12h 0.58 >More info 0.65 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
54 gun1gun5 far-red pretreated -0.55 >More info -0.67 >More info WT far-red pretreated Original data GEO bulk
55 Pst-DC3000(avrRpm1)-4hpi 0.50 >More info 0.72 >More info Pst-DC3000-4hpi Original data GEO bulk
56 mkk1/mkk2 control rep 0.60 >More info 0.62 >More info Col-0 Time 0 rep Original data GEO bulk
57 Sulfometuron EC50 0.52 >More info 0.70 >More info Carrier Original data GEO bulk
58 WT 3h -P 0.47 >More info 0.75 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
59 gh3.5-1D 48 hpi 0.56 >More info 0.65 >More info Col-0 uninoculated Original data GEO bulk
60 csn5 (csn5a-2 csn5b) light 0.58 >More info 0.63 >More info WT light Original data GEO bulk
61 35S:RPS4 eds1-2 8h -0.56 >More info -0.65 >More info 35S:RPS4 8h leaves Original data
62 flu 0.48 >More info 0.73 >More info WT Col Original data GEO bulk
63 Mutant cry1 (High Light) -0.59 >More info -0.61 >More info Col-0 (High Light) Original data GEO bulk
64 Mature callus 0.61 >More info 0.59 >More info Young callus hypocotyls Original data GEO bulk
65 cry1 high light -0.59 >More info -0.61 >More info Col-O high light Original data GEO bulk
66 rosette Dark Wounded 0.44 >More info 0.76 >More info rosette Dark Control Original data GEO bulk
67 Stem tissue 5 days NAA 0.48 >More info 0.72 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
68 Phaseolicola 2 h (leaf) 0.50 >More info 0.69 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
69 CMV-WT 0.57 >More info 0.62 >More info Mock-At Aerial tissues Original data GEO bulk
70 WT-SA 0.53 >More info 0.66 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
71 lht1 untreated 0.54 >More info 0.65 >More info WT untreated untreated leaf Original data GEO bulk
72 Cor 10h 0.54 >More info 0.65 >More info Mock 10h Cor Original data GEO bulk
73 edr1 18 h powdery mildew 0.58 >More info 0.61 >More info Col-0 18 h powdery mildew Original data GEO bulk
74 Col leaves 48h LT 0.56 >More info 0.62 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
75 Cor hrpS 10h 0.56 >More info 0.62 >More info Mock 10h Cor hrpS Original data GEO bulk
76 over-tAPX -0.37 >More info -0.81 >More info WT Col Original data GEO bulk
77 S15-118 0.61 >More info 0.57 >More info wt Original data GEO bulk
78 Leafminer locally damaged thaliana seedlings 0.55 >More info 0.62 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
79 S14-150 0.54 >More info 0.63 >More info wt Original data GEO bulk
80 pmr5 pmr6 0.52 >More info 0.65 >More info Col-0 Original data GEO bulk
81 S58-2 0.57 >More info 0.60 >More info wt Original data GEO bulk
82 Pto inoculated 0.52 >More info 0.65 >More info col Original data GEO bulk
83 WT powdery mildew 0.52 >More info 0.65 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
84 upf3 0.59 >More info 0.58 >More info WT whole plant Original data GEO bulk
85 SLWF infested 0.55 >More info 0.62 >More info SLWF uninfested rosette tissue Original data GEO bulk
86 Wounding Stress3 h (shoot) 0.48 >More info 0.69 >More info Stress mock 3 h (shoot) Original data Stress treatments
87 upf1 0.60 >More info 0.56 >More info WT whole plant Original data GEO bulk
88 Glyphosate EC50 0.56 >More info 0.60 >More info Carrier (Glyphosate) Original data GEO bulk
89 Col0-PsmES4326-24hpi 0.55 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
90 csn3-1 light 0.58 >More info 0.58 >More info WT light Original data GEO bulk
91 rcf1-1 cold 24h 0.44 >More info 0.72 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
92 anac017-2 AntimycinA 3h -0.50 >More info -0.65 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
93 WT-NOCO2 INFECTED 0.49 >More info 0.66 >More info WT-MOCK Original data GEO bulk
94 ulp1c ulp1d +Pto 0.52 >More info 0.62 >More info ulp1c ulp1d mock Original data GEO bulk
95 Col ozone 2d 0.46 >More info 0.68 >More info Col clean-air 2d ozone Original data GEO bulk
96 pepr1-1 Pepr2-3 +Pep2 2h -0.47 >More info -0.67 >More info WT +Pep2 2h Pep2 Original data GEO bulk
97 E.coli TUV86 2 fliC 7h 0.46 >More info 0.68 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
98 WT 90-105 min Xanthomonas 0.48 >More info 0.66 >More info WT T0 Original data GEO bulk
99 erf104-ko Flg22 4h 0.45 >More info 0.69 >More info erf104-ko H2O 4h Original data GEO bulk
100 mil4 BTH 0.56 >More info 0.57 >More info Col BTH rosettes Original data GEO bulk
101 DC3000 2 h (leaf) 0.48 >More info 0.65 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
102 cpr5scv1 0.49 >More info 0.64 >More info WT(COL) Original data GEO bulk
103 sid2 -0.50 >More info -0.62 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
104 essp4/sdg8-5 mutant 0.64 >More info 0.48 >More info wild type leaf Original data GEO bulk
105 Leaf GLU1-KO 0.51 >More info 0.61 >More info Leaf Col(0) rosette leaves Original data GEO bulk
106 coi1-16 ein2 sid2 ctrl -0.59 >More info -0.53 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
107 Col-0 Flg22 4h 0.49 >More info 0.63 >More info Col-0 H2O 4h Original data GEO bulk
108 Laer Alternaria 3dpi -0.47 >More info -0.65 >More info Laer Control leaf discs Original data GEO bulk
109 cpr5npr1svi1 0.46 >More info 0.66 >More info WT(COL) Original data GEO bulk
110 msh1 recA3 heat shock 0.41 >More info 0.71 >More info WT heat shock above-ground parts Original data GEO bulk
111 Leafminer damaged seedlings 0.55 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
112 cs26 long day 0.55 >More info 0.56 >More info Leaves-WT-LD leaf Original data GEO bulk
113 WT flg22 2h 0.46 >More info 0.65 >More info WT 0h Leaf tissue Original data GEO bulk
114 col-5 DC3000-avrRpm 4h 0.50 >More info 0.61 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
115 DFPM 0.51 >More info 0.60 >More info control Original data GEO bulk
116 Norflurazon 0.49 >More info 0.62 >More info Col-0 Original data GEO bulk
117 35S::ERF104 Flg22 4h 0.47 >More info 0.64 >More info 35S::ERF104 H2O 4h Original data GEO bulk
118 Fenclorim 4hr 0.49 >More info 0.62 >More info Acetone 4hr root Original data GEO bulk
119 Norflurazon 0.49 >More info 0.62 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
120 35S::PI ap3-3 35S::AP-GR +DEX 0.41 >More info 0.70 >More info 0hr DEX Original data GEO bulk
121 35S:RPS4 eds1-2 24h -0.52 >More info -0.58 >More info 35S:RPS4 24h leaves Original data
122 sid2-2 9 hpi A. brassicicola 0.51 >More info 0.59 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
123 leaf13 0.42 >More info 0.68 >More info unwounded leaves none Original data GEO bulk
124 ERF96OE 0.45 >More info 0.65 >More info WT leaf Original data
125 efr-1 +elf18 10h -0.43 >More info -0.66 >More info WT +elf18 10h elf18 Original data GEO bulk
126 cpr5 0.41 >More info 0.68 >More info WT(COL) Original data GEO bulk
127 bio4-1 mutant leaves 0.52 >More info 0.57 >More info WT leaves leaves Original data GEO bulk
128 cop1 Seedling BL 0.60 >More info 0.49 >More info WT Seedling BL Original data GEO bulk
129 Shoot -K 0.52 >More info 0.57 >More info Control-shoot Original data GEO bulk
130 K starvation (shoot) 0.52 >More info 0.57 >More info Ws (shoot) Original data GEO bulk
131 seedlings-week-old RECA1-overexpressing
transgenic		 0.49 >More info 0.60 >More info seedlings-week-old Col-0 seedlings Original data
132 DC3000 7h 0.47 >More info 0.61 >More info Mock 7h DC3000 Original data GEO bulk
133 Lipopolysaccaride4 h (leaf) 0.40 >More info 0.67 >More info Mock 4 h (leaf) Original data Elicitor treatments
134 Infected pft1 leaf 0.45 >More info 0.62 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
135 Primisulfuron EC50 0.44 >More info 0.63 >More info Carrier (primisulfuron) Original data GEO bulk
136 pmr5 0.46 >More info 0.61 >More info Col-0 Original data GEO bulk
137 current injection 0.39 >More info 0.68 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
138 A6 mutant 0.50 >More info 0.57 >More info WT rosette leaves Rosette leaves Original data GEO bulk
139 apum23 0.48 >More info 0.59 >More info WT (Col-3) aerial parts Original data GEO bulk
140 edr1 36 h powdery mildew 0.49 >More info 0.58 >More info Col-0 36 h powdery mildew Original data GEO bulk
141 aerial organ callus inducing medium 96 h 0.48 >More info 0.59 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
142 cat2-hCO2 -0.54 >More info -0.52 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
143 smg5-2 0.61 >More info 0.45 >More info WT whole plant Original data GEO bulk
144 P.syringae AvrRpt2 4 h (leaf) 0.43 >More info 0.63 >More info Mock 4 h (leaf) Original data Elicitor treatments
145 Col whole leaf 5dpi 0.44 >More info 0.62 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
146 PAHs stress 0.45 >More info 0.61 >More info exp control phenanthrene whole plants Original data GEO bulk
147 downy mildew cotyledons late stage 0.46 >More info 0.60 >More info mock inoculated Cotyledons Original data GEO bulk
148 UV 0.48 >More info 0.58 >More info WT aerial region Original data GEO bulk
149 Triazolopyrimidine EC50 0.43 >More info 0.63 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
150 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.53 >More info 0.52 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
151 pho1 0.55 >More info 0.50 >More info Col2WT Original data GEO bulk
152 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.53 >More info 0.52 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
153 Mutant coi1(leaf) -0.53 >More info -0.52 >More info Col-0 (leaf) Original data GEO bulk
154 irradiated leaf (cmt 1d) 0.43 >More info 0.62 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
155 cpr5npr1 0.40 >More info 0.65 >More info WT(COL) Original data GEO bulk
156 shoots WT 0uM Fe 0.58 >More info 0.47 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
157 Col-0 low oxygen 0.48 >More info 0.57 >More info Col-0 Original data GEO bulk
158 IRP1-OE-Ctrl--root 0.48 >More info 0.57 >More info COL-0-Ctrl--root root Original data
159 cdpk6-yfp 0.53 >More info 0.51 >More info Kan seedlings Original data GEO bulk
160 IRP1-OE-Ctrl--shoot 0.50 >More info 0.54 >More info COL-0-Ctrl--shoot shoot Original data
161 Mutant gh3.5-1D (AvrRpt2) 0.45 >More info 0.59 >More info Col-0 (AvrRpt2) Original data GEO bulk
162 Col BTH 0.37 >More info 0.67 >More info Col rosettes Original data GEO bulk
163 Elevated CO2 AMPLE N NIGHT 0.42 >More info 0.62 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
164 lht1 PstDC3000 48h 0.47 >More info 0.56 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
165 WT AntimycinA 3h 0.48 >More info 0.55 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
166 Imidazolinone EC50 0.36 >More info 0.67 >More info Carrier (Imidazolinone) Original data GEO bulk
167 Col-0 ozone 0.53 >More info 0.49 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
168 Te ozone 0.54 >More info 0.48 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
169 CMP 24hr 0.43 >More info 0.59 >More info Acetone 24hr root Original data GEO bulk
170 gpa1-4/agb1-2 ozone 2d -0.38 >More info -0.64 >More info Col ozone 2d ozone Original data GEO bulk
171 rcf1-1 cold 0h 0.43 >More info 0.59 >More info WT cold 0h Control seedlings Original data GEO bulk
172 Dex-rga(delta17) 4h GA4+DEX -0.45 >More info -0.57 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
173 seedlings protease IV 0.39 >More info 0.63 >More info seedlings nontreated control whole seedling Original data
174 WT mitomycin C 0.54 >More info 0.47 >More info WT mock shoot apical meristem Original data
175 UV Stress 24 h (shoot) 0.37 >More info 0.64 >More info Stress mock 24 h (shoot) Original data Stress treatments
176 GST 4 h (leaf) 0.35 >More info 0.66 >More info Mock 4 h (leaf) Original data Elicitor treatments
177 gh3.5D uninoculated -0.45 >More info -0.56 >More info Col-0 48 hpi Original data GEO bulk
178 Col-0 48 hpi 0.45 >More info 0.56 >More info Col-0 uninoculated Original data GEO bulk
179 IRP1-OE-Fe--shoot 0.43 >More info 0.58 >More info COL-0-Fe--shoot shoot Original data
180 wrky33 Bc inoculation 14h 0.54 >More info 0.46 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
181 CT101 ozone 0.55 >More info 0.45 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
182 Mutant siz1-3 0.43 >More info 0.57 >More info Col-0 Original data GEO bulk
183 Mock pft1 leaf 0.35 >More info 0.65 >More info Mock Col-0 leaf water leaf Original data GEO bulk
184 Laer Flg22+GA 1h 0.44 >More info 0.56 >More info Laer Control leaf discs Original data GEO bulk
185 WT flg22 1h 0.47 >More info 0.53 >More info WT 0h Leaf tissue Original data GEO bulk
186 msh1 recA3 untreated 0.33 >More info 0.67 >More info WT untreated above-ground parts Original data GEO bulk
187 RPL18 TuMV inoculated total RNA 0.37 >More info 0.63 >More info mock inoculated total RNA PO Original data GEO bulk
188 PBZ 0.48 >More info 0.52 >More info none PBZ Rosette Original data GEO bulk
189 Aerobic e1 ate2 0.41 >More info 0.59 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
190 Col ozone 3h 0.39 >More info 0.61 >More info Col clean-air 3h ozone Original data GEO bulk
191 E.coli 0157 H7 7h 0.32 >More info 0.68 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
192 col-5 hrpA 2h 0.45 >More info 0.55 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
193 siz1-3 control 0.43 >More info 0.57 >More info Col-0 control Original data GEO bulk
194 WT Bc inoculation 14h 0.53 >More info 0.46 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
195 Mutant arf19-1 0.38 >More info 0.61 >More info Col Original data GEO bulk
196 rosette Light Wounded 0.30 >More info 0.69 >More info rosette Light Control Original data GEO bulk
197 rosette leaves fdh 0.37 >More info 0.62 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
198 Laer Flg22 1h 0.46 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
199 WT NAA/flg 1h 0.45 >More info 0.54 >More info WT 0h Leaf tissue Original data GEO bulk
200 total mRNA eif3k 0.47 >More info 0.52 >More info total mRNA WT aerial part Original data GEO bulk
201 irradiated leaf (WT 1d) 0.44 >More info 0.55 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
202 Col-0 under 4 days salt 0.42 >More info 0.57 >More info Col-0 under control 4 days salt treatment rosette Original data
203 Col whole leaf amplified 5 dpi 0.52 >More info 0.46 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
204 nia1nia2noa1-2 0.50 >More info 0.48 >More info Col-0 whole seedlings Original data GEO bulk
205 Laer Flg22 2h 0.47 >More info 0.51 >More info Laer Control leaf discs Original data GEO bulk
206 Heat shock optimum 0.33 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
207 atmyc2 cop1 Seedling BL 0.48 >More info 0.50 >More info WT Seedling BL Original data GEO bulk
208 +1.6 mM Tween 20 1 h. 0.17 >More info 0.80 >More info +distilled water 1 h. Original data GEO bulk
209 AvrRpm1 2 h (leaf) 0.38 >More info 0.59 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
210 dor drought 0.26 >More info 0.71 >More info WT drought Original data GEO bulk
211 cngc1-3 0.35 >More info 0.62 >More info Col-0 root Original data GEO bulk
212 aox1a:rpoTmp untreated 0.41 >More info 0.56 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
213 seedling 24h after Gamma WT 0.42 >More info 0.55 >More info seedling day 2 unirradiated WT 24h Original data
214 Mutant iaa5_6_19 0.28 >More info 0.68 >More info Col Original data GEO bulk
215 GO5; 8h switch to ambient CO2 concentrations; 0.28 >More info 0.68 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
216 rpl24 total 0.51 >More info 0.45 >More info WT total seedling shoot/aerial seedling Original data
217 apk1 apk2 0.51 >More info 0.45 >More info Col0-control whole rosette Original data GEO bulk
218 tunicamycin -0.45 >More info -0.51 >More info DMF Original data GEO bulk
219 Col-0 INA 48h 0.41 >More info 0.55 >More info Col-0 MOCK 48h Original data GEO bulk
220 Col-0 SA 0.44 >More info 0.52 >More info Col-0 Original data GEO bulk
221 sicy-192 cotyledons 0.33 >More info 0.63 >More info WT cotyledons cotyledons Original data
222 npr1-1 SA -0.44 >More info -0.52 >More info Col-0 SA complete seedling Original data
223 ARR21C-ox 0.56 >More info 0.39 >More info Col-0 Original data ARR21C overexpression
224 aerial organ callus inducing medium 48 h 0.40 >More info 0.55 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
225 coi1-16 ein2 sid2 ozone 0.52 >More info 0.43 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
226 Mutant siz1-3 (Drought) 0.45 >More info 0.50 >More info Col-0 (Drought) Original data GEO bulk
227 arf2 brz -0.42 >More info -0.53 >More info arf2 mock Original data GEO bulk
228 Col-0 norflurazon 0.43 >More info 0.52 >More info Col-0 control Original data GEO bulk
229 Laer pretreat GA Flg22 1h 0.24 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
230 miR393 flg22 2h 0.38 >More info 0.57 >More info WT 0h Leaf tissue Original data GEO bulk
231 miR393 flg22 1h 0.41 >More info 0.54 >More info WT 0h Leaf tissue Original data GEO bulk
232 OH1 0.44 >More info 0.51 >More info Col-0 leaves Original data GEO bulk
233 bak1-3 +Pep2 10h 0.44 >More info 0.51 >More info WT +Pep2 10h Pep2 Original data GEO bulk
234 pmr4-1 control 0.43 >More info 0.52 >More info WT control uninoculated Original data GEO bulk
235 camta1/2/3 warm 0.45 >More info 0.50 >More info WT warm entire aerial part Original data GEO bulk
236 siz1-3 drought 0.45 >More info 0.50 >More info Col-0 drought Original data GEO bulk
237 Differentiation 12h 0.41 >More info 0.54 >More info Differentiation 0h leaves Original data
238 CMP 4hr 0.39 >More info 0.55 >More info Acetone 4hr root Original data GEO bulk
239 Aerobic prt6 0.36 >More info 0.58 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
240 bHLH122 ox -0.32 >More info -0.62 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
241 Col-0 INA 6d 0.39 >More info 0.54 >More info Col-0 MOCK 6d Original data GEO bulk
242 RPL18 TuMV inoculated polysomal RNA 0.40 >More info 0.53 >More info mock inoculated polysomal RNA PO Original data GEO bulk
243 cpr5 0.38 >More info 0.55 >More info WT seedling Original data GEO bulk
244 rao2 H2O2 3h -0.34 >More info -0.59 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
245 nia1nia2 0.42 >More info 0.51 >More info Col-0 whole seedlings Original data GEO bulk
246 penta Alternaria 3dpi 0.53 >More info 0.39 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
247 oas-a1.1 Cd 24h 0.39 >More info 0.53 >More info Cd 24h root Shoot Original data GEO bulk
248 1h +Pi -0.38 >More info -0.54 >More info 1h -Pi root Original data GEO bulk
249 opr3 JA 2 h 0.22 >More info 0.70 >More info opr3 0 h Original data GEO bulk
250 vte2-1 3d vernalization 0.42 >More info 0.50 >More info WT 3d vernalization Original data GEO bulk
251 phr1 phl1 Root-Pi 0.40 >More info 0.51 >More info WT Shoot+Pi roots Original data GEO bulk
252 Stem tissue 2 days NAA 0.26 >More info 0.65 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
253 Dex-rga(delta17) 2h GA4+DEX -0.38 >More info -0.53 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
254 Laer Flg22+GA 2h 0.41 >More info 0.50 >More info Laer Control leaf discs Original data GEO bulk
255 Rsch 8h 0.32 >More info 0.59 >More info Rsch CA Leaves Original data
256 Col-0 DCA 48h 0.36 >More info 0.54 >More info Col-0 MOCK 48h Original data GEO bulk
257 treated group 0.36 >More info 0.54 >More info Control group Original data
258 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.60 >More info -0.30 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
259 mkk2 24h BTH rep 0.33 >More info 0.57 >More info Col-0 24h BTH rep Original data GEO bulk
260 Tsu-1 -Fe 24h 0.34 >More info 0.55 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
261 pif3 Dark 0h -0.33 >More info -0.56 >More info WT Dark 0h etiolated seedling Original data GEO bulk
262 Tsu -Fe 24h Roots 0.34 >More info 0.55 >More info Tsu +Fe 24h Roots Original data GEO bulk
263 JMJ24 knockout 0.51 >More info 0.38 >More info WT Original data GEO bulk
264 AgNO3 3 h 0.37 >More info 0.52 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
265 clf-28 swn-7 0.39 >More info 0.50 >More info Col whole plant Original data GEO bulk
266 dde2-2 9 hpi A. brassicicola 0.38 >More info 0.51 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
267 sicy-192 gun1-101 cotyledons 0.37 >More info 0.52 >More info WT cotyledons cotyledons Original data
268 eds16 whole leaf 7d UI -0.32 >More info -0.57 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
269 rosette leaves lcr 0.35 >More info 0.53 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
270 Laer treat paclobutrazol (PAC) 0.38 >More info 0.50 >More info Laer Control leaf discs Original data GEO bulk
271 miR393 0h -0.28 >More info -0.60 >More info WT 0h Leaf tissue Original data GEO bulk
272 aerial organ callus inducing medium 24h 0.38 >More info 0.50 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
273 OE WRKY63.3 high light 0.36 >More info 0.52 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
274 Cor 24h 0.37 >More info 0.51 >More info Mock 24h Cor Original data GEO bulk
275 atmyc2 Seedling BL -0.22 >More info -0.66 >More info WT Seedling BL Original data GEO bulk
276 Fenclorim 24hr 0.33 >More info 0.54 >More info Acetone 24hr root Original data GEO bulk
277 Rsch 1d 0.33 >More info 0.54 >More info Rsch CA Leaves Original data
278 OE WRKY40.4 high light 0.37 >More info 0.50 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
279 35S:RPS4 eds1-2 2h -0.28 >More info -0.59 >More info 35S:RPS4 2h leaves Original data
280 sdg8-2 mutant 0.52 >More info 0.34 >More info wild type leaf Original data GEO bulk
281 Ba1 UV 0.31 >More info 0.55 >More info Ba1 mock UV seedling Original data
282 P.p 2.5hai 0.33 >More info 0.53 >More info At-Control roots Original data GEO bulk
283 JA 3h 0.21 >More info 0.65 >More info EtOH 3h 3hr Original data GEO bulk
284 Methyl Jasmonate 1 h 0.30 >More info 0.55 >More info Mock 1 h Original data Basic hormone treatment of seedlings
285 eds16 whole leaf 5dpi -0.30 >More info -0.55 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
286 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.30 >More info 0.55 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
287 gpa1 -ABA GC -0.24 >More info -0.61 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
288 P.p 6hai 0.35 >More info 0.50 >More info At-Control roots Original data GEO bulk
289 Light 0.25 >More info 0.60 >More info Control Original data GEO bulk
290 aerial organ callus inducing medium 12 h 0.35 >More info 0.50 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
291 L2.5 mutant -0.53 >More info -0.31 >More info Wt Original data GEO bulk
292 rosette leaves bdg 0.29 >More info 0.55 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
293 Cambium 5 days NAA 0.30 >More info 0.54 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
294 ppi2 0.31 >More info 0.52 >More info WT whole plant Original data GEO bulk
295 JA 0.31 >More info 0.52 >More info Col-0 mock Whole seedling Original data GEO bulk
296 Starch sheath 5 days MS incubation 0.29 >More info 0.54 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
297 anac017-1 AntimycinA 3h -0.31 >More info -0.52 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
298 Col-0 2HS 0.28 >More info 0.55 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
299 rgs1+no sugars -0.23 >More info -0.60 >More info WT+no sugars rosette leaves Original data GEO bulk
300 camta3-2 0.30 >More info 0.52 >More info WT Original data GEO bulk
301 FOX line K19624 0.32 >More info 0.50 >More info empty vector control (T3) FOX lines Original data GEO bulk
302 AtMYB30-as 90-105 min Xanthomonas 0.31 >More info 0.51 >More info WT 90-105 min Xanthomonas Original data GEO bulk
303 toc1-1-65hr 0.51 >More info 0.30 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
304 seedling 3h after Gamma WT 0.25 >More info 0.56 >More info seedling day 1 unirradiated WT 3h Original data
305 long 14-degree- 0.27 >More info 0.53 >More info control long Original data GEO bulk
306 bZIP1ko mutant N+Light- 0.28 >More info 0.52 >More info WT-sib N+Light- whole plant Original data GEO bulk
307 WT-Dry 0.19 >More info 0.61 >More info WT-CK dehydration treatment 1h Original data
308 Te 8h 0.30 >More info 0.50 >More info Te CA Leaves Original data
309 P.p 10.5hai 0.29 >More info 0.50 >More info At-Control roots Original data GEO bulk
310 col-5 hrpA 4h 0.27 >More info 0.52 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
311 root cap pGL2 0h BL 0.52 >More info 0.26 >More info WR 35S 0h BL brassinosteroid root Original data
312 15m.KCl 0.28 >More info 0.50 >More info To. KCl 14 day old Roots Original data GEO bulk
313 nar1-4/- 0.23 >More info 0.55 >More info WT whole seedling Original data GEO bulk
314 HSP90 Reduced RNAi-C1 0.28 >More info 0.50 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
315 E.orontii Infection 3 day 0.21 >More info 0.57 >More info Uninfection 3 day Original data Elicitor treatments
316 Cycloheximide 3 h 0.25 >More info 0.52 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
317 short 10-degree- 0.21 >More info 0.56 >More info control short Original data GEO bulk
318 iron minus 24h -0.21 >More info -0.56 >More info iron +24h root Original data GEO bulk
319 Col in Pi deficiency medium 0.19 >More info 0.58 >More info Col in control medium root Original data GEO bulk
320 WT+chitooctaose 0.16 >More info 0.61 >More info WT+water chitooctaose seedlings Original data GEO bulk
321 WT +elf18 10h 0.27 >More info 0.50 >More info WT untreated elf18 Original data GEO bulk
322 root - 08% oxygen - 2h 0.06 >More info 0.70 >More info root - 21% oxygen - 2h Original data GEO bulk
323 WT+H2O2 0.21 >More info 0.55 >More info WT H2O2 Original data GEO bulk
324 long 12-degree- 0.24 >More info 0.51 >More info control long Original data GEO bulk
325 safener treated 0.23 >More info 0.52 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
326 IXB induced 0.20 >More info 0.54 >More info Methanol IXB Suspension cells Original data GEO bulk
327 siliques AtHb1 control 0.22 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
328 OE WRKY63.3 0.24 >More info 0.50 >More info OE WRKY40.4 none leaf Original data GEO bulk
329 wnk8-2 untreated -0.16 >More info -0.57 >More info Col-0 untreated seedlings Original data GEO bulk
330 seed germinating in countinuous light 24h SL 0.05 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
331 root - 01% oxygen - 48h 0.20 >More info 0.52 >More info root - 21% oxygen - 48h Original data GEO bulk
332 chito-octamer 0.19 >More info 0.53 >More info Col Mock Original data GEO bulk
333 col-5 DC3000 4h 0.19 >More info 0.53 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
334 FarRed Light 45min -0.17 >More info -0.54 >More info White Light 45min Original data Light treatments
335 root cap pGL2(root cap pGL2BRI1) 0h BL 0.50 >More info 0.21 >More info WR 35S 0h BL brassinosteroid root Original data
336 eds16 whole leaf 0h UI -0.11 >More info -0.60 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
337 IAA7mII over-expressor IAA Treated 0.02 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
338 pXVE:HA-EDM2-a untreated -0.20 >More info -0.51 >More info Col-0 untreated seedlings Original data GEO bulk
339 coi1 -0.12 >More info -0.59 >More info Col-0 Leaves Original data GEO bulk
340 short 12-degree- 0.16 >More info 0.54 >More info control short Original data GEO bulk
341 WT +elf18 2h 0.17 >More info 0.53 >More info WT untreated elf18 Original data GEO bulk
342 Ws-2 high light 0.20 >More info 0.50 >More info Ws-2 low light Original data GEO bulk
343 TA induced 0.19 >More info 0.50 >More info Methanol TA Suspension cells Original data GEO bulk
344 9m.KNO3 0.17 >More info 0.50 >More info To. KNO3 14 day old Roots Original data GEO bulk
345 24h light (+Lincomycin) 0.17 >More info 0.50 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
346 root - 04% oxygen - 2h -0.05 >More info 0.72 >More info root - 21% oxygen - 2h Original data GEO bulk
347 wnk8-1 untreated -0.14 >More info -0.52 >More info Col-0 untreated seedlings Original data GEO bulk
348 coi1-2 0.16 >More info 0.50 >More info Col-0 mock Whole seedling Original data GEO bulk
349 chito-tetramer 0.15 >More info 0.51 >More info Col Mock Original data GEO bulk
350 WT 3H Cold -0.01 >More info 0.66 >More info WT control Original data GEO bulk
351 amiR-tor induced 6d 0.14 >More info 0.51 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
352 Polysomal RNA 35S:HF-RPL18 cold 0.13 >More info 0.51 >More info Polysomal RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
353 pvip1 pvip2 seedling 0.65 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
354 Red/FR Light45min -0.02 >More info 0.65 >More info FarRed Light 45min Original data Light treatments
355 root - 04% oxygen - 48h 0.02 >More info 0.61 >More info root - 21% oxygen - 48h Original data GEO bulk
356 root - 01% oxygen - 2h 0.07 >More info 0.53 >More info root - 21% oxygen - 2h Original data GEO bulk
357 HSP90 Reduced RNAi-B1 0.10 >More info 0.50 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
358 ABA JA 24h 0.05 >More info 0.52 >More info EtOH 24h 24hr Original data GEO bulk
359 Leaf wounded 0.00 >More info 0.57 >More info Leaf control vegetative leaf Original data GEO bulk
360 root - 04% oxygen - 30min -0.01 >More info 0.57 >More info root - 21% oxygen - 30min Original data GEO bulk
361 toc1-1-77hr 0.55 >More info -0.00 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
362 Col-0 24hpi A. brassicicola 0.53 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
363 CCA1-ox 6am non-polysomal 0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
364 ahg1-1 0.02 >More info 0.51 >More info ABA control Original data GEO bulk
365 HairpinZ 4 h (leaf) 0.53 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
366 seedling 24h after HZE atm-1 -0.01 >More info 0.50 >More info seedling day 2 unirradiated atm-1 24h Original data
367 Col PSTDC3000 24h 0.61 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
368 opr3 JA 0.5 h -0.05 >More info 0.52 >More info opr3 0 h Original data GEO bulk
369 Shoot apex inflorescence (after bolting) -0.19 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
370 bri1-116 -0.27 >More info 0.73 >More info Col seedling Original data GEO bulk
371 P. infestans 6 h (leaf) 0.58 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
372 flu dark 8hours/30 minute light -0.11 >More info 0.52 >More info col dark 8hours/30 minute light Original data GEO bulk
373 rdr6-15 0.09 >More info -0.50 >More info Col-0 plant inflorescence Original data