4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on P.p 10.5hai
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "P.p 10.5hai"  Help Download transcriptome of top 30
Score Experiment Correlation from
P.p 10.5hai		 Correlation to
P.p 10.5hai		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 P.p 10.5hai 1.00 >More info 1.00 >More info At-Control roots Original data GEO bulk
2 P.p 6hai 0.93 >More info 0.95 >More info At-Control roots Original data GEO bulk
3 P.p 30hai 0.92 >More info 0.91 >More info At-Control roots Original data GEO bulk
4 P.p 2.5hai 0.81 >More info 0.91 >More info At-Control roots Original data GEO bulk
5 AgNO3 3 h 0.80 >More info 0.82 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
6 root Dosed gold 0.82 >More info 0.78 >More info root No gold .125 mM gold 24 h roots Original data
7 0.125 mM gold 24 h 0.82 >More info 0.78 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
8 Col-0 V. longisporum-inoculated 48 hpi 0.76 >More info 0.83 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
9 DFPM 0.80 >More info 0.76 >More info control Original data GEO bulk
10 pepr1-1 Pepr2-3 +Pep2 2h -0.77 >More info -0.76 >More info WT +Pep2 2h Pep2 Original data GEO bulk
11 R. solani AG8 0.75 >More info 0.75 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
12 bak1-3 +Pep2 10h 0.73 >More info 0.76 >More info WT +Pep2 10h Pep2 Original data GEO bulk
13 seedlings protease IV 0.75 >More info 0.73 >More info seedlings nontreated control whole seedling Original data
14 Col ozone 3h 0.66 >More info 0.81 >More info Col clean-air 3h ozone Original data GEO bulk
15 Laer Flg22 1h 0.73 >More info 0.74 >More info Laer Control leaf discs Original data GEO bulk
16 seedlings-week-old RECA1-overexpressing
transgenic		 0.72 >More info 0.75 >More info seedlings-week-old Col-0 seedlings Original data
17 Chitosan 3h Treatment 0.73 >More info 0.74 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
18 Laer Flg22+GA 2h 0.75 >More info 0.71 >More info Laer Control leaf discs Original data GEO bulk
19 TNT-seedlings 0.68 >More info 0.78 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
20 B.cinerea 18 h infection 0.73 >More info 0.73 >More info Mock 18 h Original data Botrytis cinerea infection
21 Botrytis cinerea 18h 0.73 >More info 0.73 >More info control 18h Original data GEO bulk
22 ani1 T0.5 -0.67 >More info -0.78 >More info WT T0.5 root tissue Original data GEO bulk
23 oligomycin 4 h 0.73 >More info 0.72 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
24 Laer Flg22+GA 1h 0.73 >More info 0.71 >More info Laer Control leaf discs Original data GEO bulk
25 Laer Flg22 2h 0.73 >More info 0.71 >More info Laer Control leaf discs Original data GEO bulk
26 ein2-1 9 hpi A. brassicicola 0.74 >More info 0.69 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
27 pepr1-1 Pepr2-3 +Pep2 10h -0.69 >More info -0.73 >More info WT +Pep2 10h Pep2 Original data GEO bulk
28 WT NAA/flg 1h 0.71 >More info 0.71 >More info WT 0h Leaf tissue Original data GEO bulk
29 toc1-1-53hr 0.64 >More info 0.78 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
30 WT flg22 1h 0.68 >More info 0.73 >More info WT 0h Leaf tissue Original data GEO bulk
31 Whole root - low pH 12H 0.63 >More info 0.78 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
32 CMP 4hr 0.72 >More info 0.69 >More info Acetone 4hr root Original data GEO bulk
33 SCR-GR Time 1H Dex 0.70 >More info 0.70 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
34 Col-0 9 hpi A. brassicicola 0.75 >More info 0.65 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
35 miR393 flg22 1h 0.67 >More info 0.72 >More info WT 0h Leaf tissue Original data GEO bulk
36 col-5 DC3000-avrRpm 4h 0.73 >More info 0.66 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
37 col-5 hrpA 12h 0.71 >More info 0.68 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
38 ARR22-ox (t-zeatin 3 h) 0.72 >More info 0.67 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
39 AFB1 flg22 1h 0.70 >More info 0.69 >More info WT 0h Leaf tissue Original data GEO bulk
40 GST NPP1 4 h (leaf) 0.69 >More info 0.69 >More info Mock 4 h (leaf) Original data Elicitor treatments
41 Col upon hypoxia 6 hrs 0.65 >More info 0.73 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
42 R. solani AG2-1 0.72 >More info 0.66 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
43 miR393 flg22 2h 0.70 >More info 0.68 >More info WT 0h Leaf tissue Original data GEO bulk
44 oas-a1.1 Cd 18h 0.63 >More info 0.74 >More info Cd 18h root Root Original data GEO bulk
45 AFB1 flg22 2h 0.73 >More info 0.64 >More info WT 0h Leaf tissue Original data GEO bulk
46 Cycloheximide 3 h 0.69 >More info 0.68 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
47 Fenclorim 4hr 0.74 >More info 0.63 >More info Acetone 4hr root Original data GEO bulk
48 ataf1-1 mutant Col-0 Bgh inoculated 0.72 >More info 0.65 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
49 sid2-2 9 hpi A. brassicicola 0.74 >More info 0.62 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
50 WT+chitooctaose 0.62 >More info 0.74 >More info WT+water chitooctaose seedlings Original data GEO bulk
51 chito-tetramer 0.63 >More info 0.72 >More info Col Mock Original data GEO bulk
52 chito-octamer 0.65 >More info 0.70 >More info Col Mock Original data GEO bulk
53 WT Bc inoculation 14h 0.79 >More info 0.56 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
54 WT chitooctaose 0.67 >More info 0.68 >More info WT water Original data GEO bulk
55 safener treated 0.66 >More info 0.68 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
56 Laer pretreat GA Flg22 1h 0.63 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
57 WT NAA/flg 2h 0.69 >More info 0.65 >More info WT 0h Leaf tissue Original data GEO bulk
58 anac017-2 AntimycinA 3h -0.69 >More info -0.65 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
59 WT flg22 2h 0.73 >More info 0.61 >More info WT 0h Leaf tissue Original data GEO bulk
60 CMP 24hr 0.69 >More info 0.65 >More info Acetone 24hr root Original data GEO bulk
61 WT Col-0 Bgh inoculated 0.73 >More info 0.61 >More info WT Col-0 Un-inoculated Original data GEO bulk
62 hira-root -0.54 >More info -0.79 >More info WT-root root Original data
63 ani1 T16 -0.61 >More info -0.72 >More info WT T16 root tissue Original data GEO bulk
64 CeO2 germinant -0.56 >More info -0.77 >More info Millipore Water germinant CeO2 seedling Original data
65 SA 4mM 0.51 >More info 0.82 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
66 Seedling KUA1-IOX est 0.68 >More info 0.64 >More info Seedling KUA1-IOX mock Original data
67 WT AntimycinA 3h 0.65 >More info 0.67 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
68 toc1-1-77hr 0.73 >More info 0.59 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
69 Col whole leaf 7dpi 0.71 >More info 0.61 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
70 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.77 >More info 0.54 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
71 coi1-16 ein2 sid2 ctrl -0.74 >More info -0.56 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
72 cpr5npr1svi1 0.65 >More info 0.64 >More info WT(COL) Original data GEO bulk
73 5-Triiodobenzoic acid3 h 0.59 >More info 0.70 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
74 col-5 DC3000 12h 0.64 >More info 0.65 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
75 Col-Luc WT 3h antimycin A 0.71 >More info 0.58 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
76 8hr-pH4.5 0.62 >More info 0.66 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
77 AvrRpm1 2 h (leaf) 0.64 >More info 0.64 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
78 35S:RPS4 eds1-2 8h -0.65 >More info -0.63 >More info 35S:RPS4 8h leaves Original data
79 IMI 4mM 0.63 >More info 0.65 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
80 WT-NOCO2 INFECTED 0.69 >More info 0.59 >More info WT-MOCK Original data GEO bulk
81 Phaseolicola 2 h (leaf) 0.59 >More info 0.68 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
82 flu 0.62 >More info 0.65 >More info WT Col Original data GEO bulk
83 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.74 >More info 0.53 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
84 dde2-2 9 hpi A. brassicicola 0.71 >More info 0.56 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
85 camta1/3 warm 0.61 >More info 0.66 >More info WT warm entire aerial part Original data GEO bulk
86 Col-0 ozone 0.74 >More info 0.53 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
87 15m.KCl 0.54 >More info 0.73 >More info To. KCl 14 day old Roots Original data GEO bulk
88 flu over-tAPX 0.63 >More info 0.64 >More info WT Col Original data GEO bulk
89 cpr5scv1 0.66 >More info 0.60 >More info WT(COL) Original data GEO bulk
90 Dex-rga(delta17) 4h GA4+DEX -0.70 >More info -0.56 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
91 WT 30μM arsenate 8 hours. 0.68 >More info 0.58 >More info WT control (not supplemented). Original data
92 Col0-PsmES4326-24hpi 0.65 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
93 wrky33 Bc inoculation 14h 0.77 >More info 0.48 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
94 Mutant siz1-3 (Drought) 0.67 >More info 0.58 >More info Col-0 (Drought) Original data GEO bulk
95 (Col-0)+100 uM As 0.65 >More info 0.60 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
96 siz1-3 drought 0.67 >More info 0.58 >More info Col-0 drought Original data GEO bulk
97 del1-1 mutant 5d uninfected 0.66 >More info 0.58 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
98 WT+H2O2 0.58 >More info 0.66 >More info WT H2O2 Original data GEO bulk
99 hrcC 0.65 >More info 0.59 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
100 miR393 0h -0.61 >More info -0.63 >More info WT 0h Leaf tissue Original data GEO bulk
101 (Col-0)+200 uM As 0.67 >More info 0.57 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
102 9m.KCl 0.46 >More info 0.78 >More info To. KCl 14 day old Roots Original data GEO bulk
103 CT101 ozone 0.71 >More info 0.52 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
104 hrpA 7h 0.66 >More info 0.57 >More info Mock 7h hrpA Original data GEO bulk
105 P35S:rGRF3 0.75 >More info 0.48 >More info WS Original data GEO bulk
106 gai Control 0.70 >More info 0.52 >More info Laer Control leaf discs Original data GEO bulk
107 Te ozone 0.70 >More info 0.52 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
108 hrpA fliC 7h 0.64 >More info 0.58 >More info Mock 7h hrpA fliC Original data GEO bulk
109 efr-1 +elf18 10h -0.64 >More info -0.58 >More info WT +elf18 10h elf18 Original data GEO bulk
110 Cor hrpS 10h 0.61 >More info 0.61 >More info Mock 10h Cor hrpS Original data GEO bulk
111 coi1-16 ein2 sid2 ozone 0.72 >More info 0.50 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
112 Col whole leaf 5dpi 0.62 >More info 0.60 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
113 WT +elf18 2h 0.71 >More info 0.50 >More info WT untreated elf18 Original data GEO bulk
114 SCR-GR Time 12H Dex 0.63 >More info 0.58 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
115 mil4 BTH 0.58 >More info 0.63 >More info Col BTH rosettes Original data GEO bulk
116 Col-0 C2H4 24h 0.60 >More info 0.61 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
117 35S::ERF104 Flg22 4h 0.65 >More info 0.56 >More info 35S::ERF104 H2O 4h Original data GEO bulk
118 6h +Pi -0.52 >More info -0.69 >More info 6h -Pi root Original data GEO bulk
119 Botrytis cinerea 48h 0.68 >More info 0.52 >More info control 48h Original data GEO bulk
120 myb3 myb3r4d 0.55 >More info 0.65 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
121 Cor 10h 0.64 >More info 0.56 >More info Mock 10h Cor Original data GEO bulk
122 Cocultivation 8 hrs root 0.56 >More info 0.64 >More info Mock cocultivation 8 hrs root Root Original data
123 WT roots - Fe 0.73 >More info 0.47 >More info WT roots + Fe Roots Original data GEO bulk
124 oligomycin 1 h 0.51 >More info 0.69 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
125 Laer pretreat GA+JA Flg22 0h 0.72 >More info 0.47 >More info Laer pretreat water control leaf discs Original data GEO bulk
126 WT +elf18 10h 0.68 >More info 0.51 >More info WT untreated elf18 Original data GEO bulk
127 Dex-rga(delta17) 2h GA4+DEX -0.67 >More info -0.52 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
128 C24 ozone 0.70 >More info 0.49 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
129 erf104-ko Flg22 4h 0.60 >More info 0.59 >More info erf104-ko H2O 4h Original data GEO bulk
130 Sulfometuron EC50 0.66 >More info 0.53 >More info Carrier Original data GEO bulk
131 pad4-PsmES4326-24hpi -0.64 >More info -0.54 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
132 LTN008-2 aza-dc 0.64 >More info 0.54 >More info LTN012-2 Mock Original data
133 Salt Stress 24 h (root) 0.62 >More info 0.56 >More info Stress mock 24 h (root) Original data Stress treatments
134 edr1 18 h powdery mildew 0.61 >More info 0.57 >More info Col-0 18 h powdery mildew Original data GEO bulk
135 whole roots -Fe 48 hour 0.49 >More info 0.69 >More info whole roots standard Original data GEO bulk
136 ORS1 induced 0.55 >More info 0.62 >More info mock-induced rosette leaves Original data GEO bulk
137 E.coli TUV86 2 fliC 7h 0.63 >More info 0.54 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
138 toc1-1-49hr 0.56 >More info 0.61 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
139 Triazolopyrimidine EC50 0.64 >More info 0.53 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
140 Laer pretreat JA Flg22 2h 0.73 >More info 0.44 >More info Laer pretreat water control leaf discs Original data GEO bulk
141 aba3-1 0.45 >More info 0.72 >More info wt Original data GEO bulk
142 Elevated CO2 AMPLE N NIGHT 0.56 >More info 0.60 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
143 Primisulfuron EC50 0.66 >More info 0.50 >More info Carrier (primisulfuron) Original data GEO bulk
144 seedlings +5AC 0.61 >More info 0.55 >More info control seedlings 10-day old whole seedling Original data GEO bulk
145 9m.KNO3 0.56 >More info 0.60 >More info To. KNO3 14 day old Roots Original data GEO bulk
146 toc1-1-57hr 0.53 >More info 0.63 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
147 HopZ1a treated 0.62 >More info 0.54 >More info col Original data GEO bulk
148 root - 01% oxygen - 2h 0.38 >More info 0.78 >More info root - 21% oxygen - 2h Original data GEO bulk
149 Col-0 low oxygen 0.48 >More info 0.68 >More info Col-0 control low oxygen root Original data GEO bulk
150 edr1 36 h powdery mildew 0.58 >More info 0.58 >More info Col-0 36 h powdery mildew Original data GEO bulk
151 toc1-1-65hr 0.58 >More info 0.57 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
152 pmr5 pmr6 0.55 >More info 0.60 >More info Col-0 Original data GEO bulk
153 Light 3day wt -0.61 >More info -0.54 >More info 0h wt Original data
154 bHLH122 ox -0.45 >More info -0.70 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
155 Laer pretreat GA+JA Flg22 1h 0.66 >More info 0.48 >More info Laer pretreat water control leaf discs Original data GEO bulk
156 cs26 short-day -0.58 >More info -0.56 >More info Leaves-WT-SD leaf Original data GEO bulk
157 sid2-1 cold -0.59 >More info -0.55 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
158 col-5 DC3000 4h 0.48 >More info 0.66 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
159 Leafminer damaged seedlings 0.57 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
160 Mutant siz1-3 0.60 >More info 0.53 >More info Col-0 Original data GEO bulk
161 35S:RPS4 eds1-2 24h -0.55 >More info -0.58 >More info 35S:RPS4 24h leaves Original data
162 siz1-3 control 0.60 >More info 0.53 >More info Col-0 control Original data GEO bulk
163 MPK6 ox Shoot Hypoxia 0.53 >More info 0.60 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
164 S15-118 0.49 >More info 0.64 >More info wt Original data GEO bulk
165 AvrRpt2 Col-0 6hpi 0.68 >More info 0.44 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
166 camta2/3 warm 0.60 >More info 0.52 >More info WT warm entire aerial part Original data GEO bulk
167 CMV-WT 0.57 >More info 0.55 >More info Mock-At Aerial tissues Original data GEO bulk
168 WT 2-4h Xanthomonas 0.50 >More info 0.62 >More info WT T0 Original data GEO bulk
169 ceh1 mutant 0.57 >More info 0.55 >More info Parent line Original data
170 AtLysM RLK1 mutant chitooctaose -0.56 >More info -0.56 >More info WT chitooctaose Original data GEO bulk
171 Ts5 roots 2hr KCl control 0.67 >More info 0.45 >More info Col0 roots 2hr KCl control root Original data GEO bulk
172 ABA DFPM 0.62 >More info 0.50 >More info control Original data GEO bulk
173 GO5; 8h switch to ambient CO2 concentrations; 0.55 >More info 0.57 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
174 Selenate (root) 0.47 >More info 0.65 >More info Ws (root) Original data GEO bulk
175 Root Selenate 0.47 >More info 0.65 >More info Root control 40 micromolar selenate Root Original data GEO bulk
176 35S:RPS4 eds1-2 2h -0.44 >More info -0.68 >More info 35S:RPS4 2h leaves Original data
177 Laer pretreat GA Flg22 0h 0.71 >More info 0.41 >More info Laer pretreat water control leaf discs Original data GEO bulk
178 col-5 hrpA 4h 0.55 >More info 0.56 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
179 arf2 mock 0.56 >More info 0.55 >More info Col mock Original data GEO bulk
180 Mutant arf2 (etiol) 0.56 >More info 0.55 >More info Col (etiol) Original data GEO bulk
181 Laer pretreat JA Flg22 1h 0.71 >More info 0.40 >More info Laer pretreat water control leaf discs Original data GEO bulk
182 Col-0 RNAi-MBS2/mbs1-1 HL 3h -0.51 >More info -0.60 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
183 Root -P -0.61 >More info -0.50 >More info Root Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
184 Oxidative Stress 3 h (root) -0.54 >More info -0.57 >More info Stress mock 3 h (root) Original data Stress treatments
185 root protoplasts 40 mM NaCl 0.53 >More info 0.58 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
186 WT +Pep2 2h 0.76 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
187 mpk6-ko Flg22 4h 0.50 >More info 0.61 >More info mpk6-ko H2O 4h Original data GEO bulk
188 Laer treat paclobutrazol (PAC) 0.58 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
189 Octopus overexpressor 35SDYG25 0.41 >More info 0.70 >More info WS Original data GEO bulk
190 toc1-1-81hr 0.42 >More info 0.69 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
191 npr1-1 SA -0.51 >More info -0.59 >More info Col-0 SA complete seedling Original data
192 bbx24 in Simulated Shade -0.62 >More info -0.48 >More info WT in simulated shade shade seedling Original data
193 WT +Pep2 10h 0.65 >More info 0.45 >More info WT untreated Pep2 Original data GEO bulk
194 arf2 brz -0.58 >More info -0.52 >More info arf2 mock Original data GEO bulk
195 E.orontii Infection 3 day 0.45 >More info 0.65 >More info Uninfection 3 day Original data Elicitor treatments
196 Fe starvation 72 h 0.47 >More info 0.63 >More info Control Original data GEO bulk
197 whole roots -Fe 72 hour 0.47 >More info 0.63 >More info whole roots standard Original data GEO bulk
198 Roots Cd -0.48 >More info -0.62 >More info Roots control Cd Root Original data GEO bulk
199 cs26 long day 0.55 >More info 0.54 >More info Leaves-WT-LD leaf Original data GEO bulk
200 Chitin 0.58 >More info 0.51 >More info Col C Original data GEO bulk
201 WT seedlings MV 0.61 >More info 0.48 >More info WT seedlings control Seedlings Original data GEO bulk
202 Flagellin 4 h (leaf) 0.52 >More info 0.57 >More info Mock 4 h (leaf) Original data Elicitor treatments
203 plant (tga2-5-6) 4h phytoprostane A1 0.49 >More info 0.60 >More info plant (tga2-5-6) 4h control Original data GEO bulk
204 S58-2 0.48 >More info 0.61 >More info wt Original data GEO bulk
205 Kas2 roots 2hr KNO3 nitrogen 0.57 >More info 0.51 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
206 cpr5 0.52 >More info 0.56 >More info WT seedling Original data GEO bulk
207 +1.6 mM Tween 20 1 h. 0.48 >More info 0.60 >More info +distilled water 1 h. Original data GEO bulk
208 Cor 24h 0.52 >More info 0.55 >More info Mock 24h Cor Original data GEO bulk
209 WT-SA 0.56 >More info 0.51 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
210 Elevated CO2 AMPLE N DAY 0.56 >More info 0.51 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
211 Light 0.39 >More info 0.68 >More info Control Original data GEO bulk
212 BLM+INA 0.46 >More info 0.61 >More info CK BLM and INA seedling Original data
213 SA 0.36 >More info 0.71 >More info WT mock Whole seedling Original data GEO bulk
214 E.coli 0157 H7 7h 0.60 >More info 0.46 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
215 camta1/2/3 warm 0.56 >More info 0.50 >More info WT warm entire aerial part Original data GEO bulk
216 bZIP1ko mutant N+Light- 0.60 >More info 0.46 >More info WT-sib N+Light- whole plant Original data GEO bulk
217 til1-1 22C 0.45 >More info 0.61 >More info Col-0 22C Original data GEO bulk
218 petiole in D 0.47 >More info 0.59 >More info petiole in WL petioles Original data GEO bulk
219 leaf blade in D 0.43 >More info 0.63 >More info leaf blade in WL leaf blades Original data GEO bulk
220 3m.KCl 0.47 >More info 0.59 >More info To. KCl 14 day old Roots Original data GEO bulk
221 low CO2 + light 0.40 >More info 0.66 >More info normal CO2 + light Original data GEO bulk
222 Col BTH 0.39 >More info 0.67 >More info Col rosettes Original data GEO bulk
223 C24-1h IAA 0.56 >More info 0.49 >More info C24-0h IAA whole plant Original data GEO bulk
224 tunicamycin -0.55 >More info -0.50 >More info DMF Original data GEO bulk
225 root cells endodermis 140mM NaCl 8 hours 0.55 >More info 0.50 >More info root cells endodermis standard 1 hour root cells endodermis Original data
226 Mutant coi1(leaf) -0.51 >More info -0.54 >More info Col-0 (leaf) Original data GEO bulk
227 mkk1/mkk2 control rep 0.56 >More info 0.49 >More info Col-0 Time 0 rep Original data GEO bulk
228 Col-0 wt Hypoxic 0.43 >More info 0.62 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
229 Shoot -Cs 0.49 >More info 0.56 >More info Control-shoot Original data GEO bulk
230 Leafminer locally damaged thaliana seedlings 0.57 >More info 0.48 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
231 Col-0 INA 6d 0.57 >More info 0.48 >More info Col-0 MOCK 6d Original data GEO bulk
232 35S:RPS4 rrs1-11 8h -0.57 >More info -0.48 >More info 35S:RPS4 8h leaves Original data
233 msh1 albino 0.60 >More info 0.44 >More info WT aerial part Original data GEO bulk
234 aba1 hypocotyl 0.51 >More info 0.53 >More info Ler hypocotyl hypocotyl Original data GEO bulk
235 Dark 3day ivd 0.55 >More info 0.49 >More info 0h ivd Original data
236 Col-0 mbs1-1 HL 3h -0.52 >More info -0.52 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
237 WT powdery mildew 0.54 >More info 0.50 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
238 Col-0 INA 48h 0.49 >More info 0.55 >More info Col-0 MOCK 48h Original data GEO bulk
239 12m.KCl 0.36 >More info 0.68 >More info To. KCl 14 day old Roots Original data GEO bulk
240 coi1-2 0.41 >More info 0.63 >More info Col-0 mock Whole seedling Original data GEO bulk
241 myb61 xylem 0.43 >More info 0.61 >More info wt xylem xylem Original data GEO bulk
242 sav1-1 light 0.58 >More info 0.45 >More info Col-0 light seedlings Original data GEO bulk
243 camta1/2/3 24h cold 0.51 >More info 0.52 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
244 col-5 hrpA 2h 0.51 >More info 0.52 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
245 Bur-0-1h IAA 0.60 >More info 0.43 >More info Bur-0h IAA whole plant Original data GEO bulk
246 inhibitor A Treated 0.43 >More info 0.60 >More info Negative Control Original data GEO bulk
247 atgsnor1-1 -0.48 >More info -0.55 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
248 smg7b-1 0.47 >More info 0.56 >More info WT whole plant Original data GEO bulk
249 del1-1 5dpi 0.49 >More info 0.54 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
250 root cells endodermis 140mM NaCl 3 hours 0.46 >More info 0.57 >More info root cells endodermis standard 1 hour root cells endodermis Original data
251 HopZ1a treated ulp1c ulp1d 0.55 >More info 0.47 >More info col Original data GEO bulk
252 UV Stress 24 h (shoot) 0.45 >More info 0.57 >More info Stress mock 24 h (shoot) Original data Stress treatments
253 GST 4 h (leaf) 0.40 >More info 0.62 >More info Mock 4 h (leaf) Original data Elicitor treatments
254 Infected pft1 leaf 0.37 >More info 0.65 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
255 Nicotinamide-73hr 0.39 >More info 0.63 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
256 Col-0 under 4 days salt 0.54 >More info 0.47 >More info Col-0 under control 4 days salt treatment rosette Original data
257 cpr5npr1 0.56 >More info 0.45 >More info WT(COL) Original data GEO bulk
258 vte2-1 3d vernalization 0.57 >More info 0.44 >More info WT 3d vernalization Original data GEO bulk
259 CMV-A2b mutant 0.51 >More info 0.50 >More info Mock-At Aerial tissues Original data GEO bulk
260 tbf1-elf18 -0.56 >More info -0.45 >More info WT-elf18 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
261 vtc1 (II) 0.54 >More info 0.47 >More info Col (II) rosette Original data GEO bulk
262 C24-3h IAA 0.58 >More info 0.43 >More info C24-0h IAA whole plant Original data GEO bulk
263 SCR-GR Time 3H Dex 0.60 >More info 0.41 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
264 Methyl Jasmonate 0.5 h 0.40 >More info 0.61 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
265 roottip hypoxia total 0.34 >More info 0.67 >More info roottip control total Original data GEO bulk
266 npr1 sni1 SA 0.47 >More info 0.54 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
267 Heat shock optimum 0.36 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
268 1 h Light Total RNA -0.41 >More info -0.60 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
269 abi1 hypocotyl 0.46 >More info 0.55 >More info Ler hypocotyl hypocotyl Original data GEO bulk
270 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.56 >More info -0.44 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
271 HRE1-RNAi20 hypoxia 6 hrs 0.57 >More info 0.43 >More info Col upon hypoxia 6 hrs hypoxia seedling roots Original data GEO bulk
272 Col-0-avrB-6h 0.49 >More info 0.51 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
273 agb1 gpa1 -ABA GC -0.43 >More info -0.57 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
274 Aerobic e1 ate2 0.33 >More info 0.67 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
275 bak1-3 +Pep2 2h 0.42 >More info 0.58 >More info WT +Pep2 2h Pep2 Original data GEO bulk
276 9 hr Hypoxia Total RNA 0.42 >More info 0.58 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
277 Rose Bengal 0.5 uM 0.38 >More info 0.62 >More info Control RB and PER Rose Bengal Original data
278 INA 0.45 >More info 0.55 >More info CK INA seedling Original data
279 Col-0 2HS 0.28 >More info 0.72 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
280 Bay-0-30min IAA 0.58 >More info 0.41 >More info Bay-0-0h IAA whole plant Original data GEO bulk
281 vtc2 (I) 0.51 >More info 0.48 >More info Col (I) rosette Original data GEO bulk
282 Salicylic Acid 3 h 0.41 >More info 0.58 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
283 Red Light 4 h 0.47 >More info 0.52 >More info White Light 4 h Original data Light treatments
284 Phytoprostane A1 4 h 0.32 >More info 0.67 >More info Col-0 Original data GEO bulk
285 IAA7mII over-expressor IAA Treated 0.30 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
286 rosette Light Wounded 0.45 >More info 0.54 >More info rosette Light Control Original data GEO bulk
287 IAA/inhibitor B Treated 0.33 >More info 0.66 >More info IAA Treated Original data GEO bulk
288 Root submergence 24h 0.34 >More info 0.65 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
289 FHY3p dark+DEX -0.49 >More info -0.50 >More info FHY3p dark+mock Original data GEO bulk
290 FLIGHT TAGESB plate6 ROOTS 0.48 >More info 0.51 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
291 AsAKiin11 T2 0.32 >More info 0.67 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
292 cpr5 0.50 >More info 0.48 >More info WT(COL) Original data GEO bulk
293 Root GLU1-KO -0.59 >More info -0.39 >More info Root Col(0) roots Original data GEO bulk
294 Laer pretreat GA+JA Flg22 2h 0.59 >More info 0.39 >More info Laer pretreat water control leaf discs Original data GEO bulk
295 tZ -0.61 >More info -0.37 >More info DMSO--WT trans-zeatin roots Original data GEO bulk
296 mkk1/mkk2 24h BTH rep 0.52 >More info 0.46 >More info Col-0 24h BTH rep Original data GEO bulk
297 MIL4 ox BTH 0.51 >More info 0.47 >More info Col BTH Original data GEO bulk
298 glk1 glk2 GLK1-GR +DEX 24h -0.52 >More info -0.46 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
299 1h +Pi -0.38 >More info -0.60 >More info 1h -Pi root Original data GEO bulk
300 gun1gun5 far-red pretreated -0.43 >More info -0.55 >More info WT far-red pretreated Original data GEO bulk
301 9 hr Hypoxia 1 hr recovery Total RNA 0.41 >More info 0.57 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
302 Atss3 Light4 -0.51 >More info -0.46 >More info Atss3 Dark0.5 Original data GEO bulk
303 seedling 6h after HZE WT 0.53 >More info 0.44 >More info seedling day 1 unirradiated WT 6h Original data
304 tor mutant glucose 0.52 >More info 0.45 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
305 1.5 hr ammonium 0.46 >More info 0.51 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
306 pmr5 0.40 >More info 0.57 >More info Col-0 Original data GEO bulk
307 Col-0 Root 100 mM ATP 30 min 0.42 >More info 0.55 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
308 ALC Toc1 light-light Mock -0.60 >More info -0.36 >More info Col light-light Mock no ethanol Original data GEO bulk
309 anac017-1 H2O2 3h -0.52 >More info -0.44 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
310 bio4-1 mutant watered00µM biotin leaves -0.53 >More info -0.43 >More info bio4-1 mutant leaves leaves Original data GEO bulk
311 Col-0 SA 0.50 >More info 0.46 >More info Col-0 Original data GEO bulk
312 mkk2 24h BTH rep 0.42 >More info 0.54 >More info Col-0 24h BTH rep Original data GEO bulk
313 Nicotinamide-53hr 0.35 >More info 0.61 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
314 Root submergence 7h 0.34 >More info 0.62 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
315 ERF96OE 0.43 >More info 0.53 >More info WT leaf Original data
316 OsSAP11 expressing -0.40 >More info -0.55 >More info WT seedlings Original data GEO bulk
317 Got7 UV 0.51 >More info 0.44 >More info Got7 mock UV seedling Original data
318 IAA 1 h 0.60 >More info 0.35 >More info Mock 1 h Original data Basic hormone treatment of seedlings
319 bio4-1 mutant leaves 0.58 >More info 0.37 >More info WT leaves leaves Original data GEO bulk
320 sps1 -0.64 >More info -0.31 >More info WT seedling Original data GEO bulk
321 DC3000 hrcC 2 h (leaf) 0.42 >More info 0.53 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
322 toc1-1-73hr 0.36 >More info 0.59 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
323 Root dark control 24h 0.29 >More info 0.66 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
324 ckh1 CK200 0.41 >More info 0.54 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
325 WT Shoot Hypoxia 0.35 >More info 0.60 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
326 pGL3::GL3-GR Dex 4 hours -0.28 >More info -0.66 >More info pGL3::GL3-GR mock 4 hours Original data GEO bulk
327 wavy 0.39 >More info 0.55 >More info WT Original data GEO bulk
328 GO5; 0h switch to ambient CO2 concentrations; -0.52 >More info -0.42 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
329 penta Alternaria 3dpi 0.57 >More info 0.37 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
330 Col whole leaf amplified 5 dpi 0.42 >More info 0.52 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
331 3x(p) 0.29 >More info 0.65 >More info 2x two week old seedlings Original data
332 Col-0 flu HL 3h 0.40 >More info 0.53 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
333 pnp1-1 1wk -P 0.59 >More info 0.34 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
334 Root P recovery 0.50 >More info 0.43 >More info Root -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
335 atr zebularine 0.58 >More info 0.35 >More info WT zebularine shoot apical meristem Original data
336 toc1-1-85hr 0.36 >More info 0.57 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
337 A. thaliana-A. lyrata hybrid -0.33 >More info -0.60 >More info A. thaliana mature leaves before flowering Original data GEO bulk
338 mbd6 mutant thaliana 10-day-old seedling 0.54 >More info 0.38 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
339 1 h Light IP RNA -0.36 >More info -0.56 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
340 sid2 -0.51 >More info -0.41 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
341 aba2 1% sucrose 12-day-old 0.57 >More info 0.35 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
342 2 hr Hypoxia Total RNA 0.34 >More info 0.58 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
343 cdkf:1-2 0.52 >More info 0.39 >More info wt seedling young seedlings Original data GEO bulk
344 Shoot P recovery 0.53 >More info 0.38 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
345 Full AC2 T2 0.64 >More info 0.27 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
346 TA induced 0.37 >More info 0.54 >More info Methanol TA Suspension cells Original data GEO bulk
347 npr1 sni1 brca2a SA -0.38 >More info -0.53 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
348 Fenclorim 24hr 0.38 >More info 0.53 >More info Acetone 24hr root Original data GEO bulk
349 root longitudinal zone-4 pH 4.6 0.38 >More info 0.53 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
350 IRP1-OE-Fe--shoot 0.57 >More info 0.34 >More info COL-0-Fe--shoot shoot Original data
351 atr mock 0.57 >More info 0.34 >More info WT mock shoot apical meristem Original data
352 Shoot -P -0.52 >More info -0.38 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
353 Col leaves 48h LT 0.54 >More info 0.36 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
354 root hypoxia total 0.27 >More info 0.63 >More info root control total Original data GEO bulk
355 OE WRKY63.3 high light 0.39 >More info 0.51 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
356 SND1XVE -0.59 >More info -0.31 >More info SND1XVE Control cycloheximide+estradiol Original data GEO bulk
357 dorn1-1 Root 100 mM ATP 30 min -0.20 >More info -0.70 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
358 ein2-PsmES4326-24hpi -0.34 >More info -0.55 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
359 phyB mutant 22C 4hrs -0.26 >More info -0.63 >More info L22-4hrs whole plant excluding roots Original data GEO bulk
360 9 hr Hypoxia IP RNA 0.39 >More info 0.50 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
361 Methyl Jasmonate 1 h 0.33 >More info 0.55 >More info Mock 1 h Original data Basic hormone treatment of seedlings
362 Root dark control 7h 0.26 >More info 0.62 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
363 DC3000 24h 0.51 >More info 0.36 >More info Mock 24h DC3000 Original data GEO bulk
364 K starvation (root) 0.26 >More info 0.61 >More info Ws (root) Original data GEO bulk
365 Tsu-1 -Fe 24h 0.36 >More info 0.51 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
366 Aerobic prt6 0.37 >More info 0.50 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
367 Tsu -Fe 24h Roots 0.36 >More info 0.51 >More info Tsu +Fe 24h Roots Original data GEO bulk
368 sfr6 drought -0.23 >More info -0.64 >More info WT drought All aerial tissue Original data GEO bulk
369 Root -K 0.26 >More info 0.61 >More info Control-root Original data GEO bulk
370 shoot-10 μM DEX- 6 hr 0.37 >More info 0.50 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
371 C58 3hpi 0.30 >More info 0.57 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
372 ice1 6H Cold 0.53 >More info 0.33 >More info WT 6H Cold Original data GEO bulk
373 Bur-0-30min IAA 0.52 >More info 0.34 >More info Bur-0h IAA whole plant Original data GEO bulk
374 HARAP hypoxic 0.33 >More info 0.53 >More info hypoxic hypoxia Original data GEO bulk
375 WT drought 0.31 >More info 0.55 >More info WT control All aerial tissue Original data GEO bulk
376 flu dark 8hours/30 minute light 0.13 >More info 0.73 >More info col dark 8hours/30 minute light Original data GEO bulk
377 root - 08% oxygen - 2h 0.09 >More info 0.77 >More info root - 21% oxygen - 2h Original data GEO bulk
378 Col-0 DCA 48h 0.25 >More info 0.61 >More info Col-0 MOCK 48h Original data GEO bulk
379 NAA 3h 0.53 >More info 0.32 >More info before treatment NAA root Original data GEO bulk
380 ice1 control 0.53 >More info 0.32 >More info WT control Original data GEO bulk
381 rosette Dark Wounded 0.55 >More info 0.30 >More info rosette Dark Control Original data GEO bulk
382 amiRAP aerobic -0.29 >More info -0.56 >More info WT aerobic aerobic Original data GEO bulk
383 Nicotinamide-81hr 0.28 >More info 0.56 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
384 siliques AtHb1 control 0.32 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
385 24h +Pi -0.57 >More info -0.27 >More info 24h -Pi root Original data GEO bulk
386 Nicotinamide-57hr 0.24 >More info 0.60 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
387 ice1 3H Cold 0.52 >More info 0.31 >More info WT 3H Cold Original data GEO bulk
388 Time-0 chr11-1chr17-1 -0.52 >More info -0.31 >More info Time-0 Col-0 leaf explants Original data
389 BR 0.54 >More info 0.29 >More info WT-mock BR dark-grown seedlings Original data GEO bulk
390 root - 01% oxygen - 48h 0.30 >More info 0.53 >More info root - 21% oxygen - 48h Original data GEO bulk
391 protoplasts T2 [flg22] 0.31 >More info 0.52 >More info protoplasts T2 [CPK] mesophyll protoplasts Original data GEO bulk
392 Nicotinamide-69hr 0.33 >More info 0.50 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
393 Kas-1 -Fe 24h -0.30 >More info -0.53 >More info Kas-1 +Fe 24h roots Original data GEO bulk
394 Kas -Fe 24h Roots -0.30 >More info -0.53 >More info Kas +Fe 24h Roots Original data GEO bulk
395 detached inflorescences 24h 0.27 >More info 0.56 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
396 4C 1h 0.29 >More info 0.54 >More info 4C 0h Original data GEO bulk
397 IAA 0.5h 0.32 >More info 0.51 >More info control 0.5h root Original data GEO bulk
398 4d red light grown hmr-5 seedlings 0.33 >More info 0.50 >More info 4d red light grown WT(Col-0) seedlings Original data
399 shoot-10 μM DEX- 24hr 0.26 >More info 0.57 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
400 overexpresser LBD38 in -N -0.52 >More info -0.30 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
401 ahg2-1sid2-2 0.30 >More info 0.52 >More info WT (Col) control Original data GEO bulk
402 low CO2 + dark 0.29 >More info 0.53 >More info normal CO2 + light Original data GEO bulk
403 mbd11 mutant thaliana 10-day-old seedling 0.51 >More info 0.30 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
404 FarRed Light 45min 0.28 >More info 0.53 >More info White Light 45min Original data Light treatments
405 Col-0-3h IAA 0.53 >More info 0.27 >More info Col-0-0h IAA whole plant Original data GEO bulk
406 Mutant axr3-1 (IAA) 0.19 >More info 0.61 >More info Col (IAA) Original data GEO bulk
407 inhibitor B Treated 0.21 >More info 0.59 >More info Negative Control Original data GEO bulk
408 Cd 18h root -0.23 >More info -0.57 >More info WT-Untreated Root Original data GEO bulk
409 dicamba 0.21 >More info 0.59 >More info WT mock whole seedling Original data GEO bulk
410 coi1 -0.23 >More info -0.57 >More info Col-0 Leaves Original data GEO bulk
411 SHR-GR Time 1H Dex 0.52 >More info 0.27 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
412 Mature callus 0.54 >More info 0.25 >More info Young callus hypocotyls Original data GEO bulk
413 Lip0 UV 0.66 >More info 0.13 >More info Lip0 mock UV seedling Original data
414 pnp1-1 1wk +P 0.50 >More info 0.29 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
415 tumour 0.52 >More info 0.27 >More info non-tumor tumour Original data GEO bulk
416 60m light -0.50 >More info -0.29 >More info before light whole seedlings Original data GEO bulk
417 RRE2 -0.56 >More info -0.23 >More info Col C Original data GEO bulk
418 SQ8 roots 2hr KCl control 0.51 >More info 0.28 >More info Col0 roots 2hr KCl control root Original data GEO bulk
419 max3GR24 (1 uM) -0.26 >More info -0.53 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
420 ex2 flu dark 8hours/30 minute light 0.21 >More info 0.58 >More info col dark 8hours/30 minute light Original data GEO bulk
421 IAA 2h 0.22 >More info 0.57 >More info control 2h root Original data GEO bulk
422 30m light -0.59 >More info -0.19 >More info before light whole seedlings Original data GEO bulk
423 ACC 3 h 0.28 >More info 0.50 >More info Mock 3 h Original data Basic hormone treatment of seedlings
424 Nicotinamide-85hr 0.17 >More info 0.61 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
425 SA 24h 0.20 >More info 0.58 >More info EtOH 24h 24hr Original data GEO bulk
426 35S::MBF1c 0.25 >More info 0.53 >More info control Original data GEO bulk
427 Chemically 0.24 >More info 0.54 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
428 Col-0-1h IAA 0.56 >More info 0.21 >More info Col-0-0h IAA whole plant Original data GEO bulk
429 ahg1-1 0.19 >More info 0.58 >More info ABA control Original data GEO bulk
430 Mh0 UV -0.53 >More info -0.23 >More info Mh0 mock UV seedling Original data
431 shoot-10 μM DEX- 12 hr 0.23 >More info 0.53 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
432 cat2-hCO2 -0.53 >More info -0.22 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
433 15m light -0.57 >More info -0.18 >More info before light whole seedlings Original data GEO bulk
434 nas4x leaves + Fe 0.58 >More info 0.17 >More info WT leaves + Fe Leaves Original data GEO bulk
435 C24 UV1 -0.57 >More info -0.18 >More info C24 mock UV seedling Original data
436 cys-c1 root -0.59 >More info -0.15 >More info Root-WT roots Original data GEO bulk
437 Col-0 24hpi A. brassicicola 0.72 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
438 chl1-12 10mM NH4NO3 -0.24 >More info -0.50 >More info col 10mM NH4NO3 Root Original data
439 light -0.55 >More info -0.18 >More info dark light seedling Original data GEO bulk
440 vte2 leaves 48h LT 0.50 >More info 0.23 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
441 WT (Col) glucose -0.15 >More info -0.58 >More info WT (Col) glucose seedlings Original data GEO bulk
442 C58 35dpi 0.52 >More info 0.19 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
443 oas-a1.1 shoot -0.52 >More info -0.19 >More info WT-Untreated Shoot Original data GEO bulk
444 Apex mir-3TCP 14DAS -0.13 >More info -0.58 >More info Apex Col 14DAS Original data GEO bulk
445 QK HS 0.18 >More info 0.53 >More info QK control heat shocked seedling Original data GEO bulk
446 WT-Dry 0.19 >More info 0.51 >More info WT-CK dehydration treatment 1h Original data
447 Ws seedlings 0.54 >More info 0.15 >More info ged1 seedlings Original data GEO bulk
448 ged1 seedlings -0.54 >More info -0.15 >More info Ws seedlings Original data GEO bulk
449 aerial organ callus inducing medium 48 h 0.54 >More info 0.14 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
450 Protoplast Induced 0.11 >More info 0.57 >More info Uninduced Original data GEO bulk
451 nas4x roots - Fe -0.57 >More info -0.10 >More info WT roots - Fe Roots Original data GEO bulk
452 SA 3h 0.06 >More info 0.61 >More info EtOH 3h 3hr Original data GEO bulk
453 Nicotinamide-61hr 0.13 >More info 0.53 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
454 root - 04% oxygen - 2h -0.19 >More info 0.85 >More info root - 21% oxygen - 2h Original data GEO bulk
455 sng1 -0.08 >More info -0.56 >More info WT aerial region Original data GEO bulk
456 opr3 JA 0.5 h 0.13 >More info 0.51 >More info opr3 0 h Original data GEO bulk
457 HairpinZ 4 h (leaf) 0.65 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
458 root - 04% oxygen - 48h 0.02 >More info 0.59 >More info root - 21% oxygen - 48h Original data GEO bulk
459 rgs1+no sugars -0.11 >More info -0.50 >More info WT+no sugars rosette leaves Original data GEO bulk
460 P. infestans 6 h (leaf) 0.75 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
461 Mock pft1 leaf 0.07 >More info 0.52 >More info Mock Col-0 leaf water leaf Original data GEO bulk
462 cngc4 0.05 >More info 0.54 >More info Ws-2 Seedlings Original data GEO bulk
463 t-zeatin 0.5 h -0.07 >More info -0.51 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
464 myb50 xylem 0.52 >More info 0.05 >More info wt xylem xylem Original data GEO bulk
465 cpctry 0.06 >More info 0.50 >More info Col Original data GEO bulk
466 shoot hypoxia total 0.01 >More info 0.54 >More info shoot control total Original data GEO bulk
467 Full C2 T2 0.04 >More info 0.51 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
468 WT Root Hypoxia -0.04 >More info 0.59 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
469 RGA-GR-DEX 0.01 >More info 0.52 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
470 bri1-116 -0.20 >More info 0.73 >More info Col seedling Original data GEO bulk
471 Leaf wounded -0.01 >More info 0.54 >More info Leaf control vegetative leaf Original data GEO bulk
472 CCA1-ox 6am non-polysomal 0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
473 Truncated AC2 T2 -0.53 >More info 0.01 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
474 iron minus 6 h -0.50 >More info 0.01 >More info iron +6 h root Original data GEO bulk
475 xyl-grown cell culture- 1h 1mM Fru 0.12 >More info -0.61 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
476 FLIGHT TAGESB plate 0.50 >More info -0.02 >More info GROUND CONTROL TAGESB plate Original data
477 Col PSTDC3000 24h 0.60 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
478 sex1-3 -0.06 >More info 0.52 >More info Col-WT leaves Original data GEO bulk
479 seedling -S Exp -0.12 >More info 0.58 >More info seedling FN Exp seedling Original data
480 Mutant axr3-1 -0.14 >More info 0.53 >More info Col Original data GEO bulk
481 Light 3day hml -0.53 >More info 0.16 >More info 0h hml Original data
482 WT 3H Cold -0.16 >More info 0.53 >More info WT control Original data GEO bulk
483 seed germinating in countinuous light 24h SL -0.35 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
484 root - 04% oxygen - 30min -0.34 >More info 0.61 >More info root - 21% oxygen - 30min Original data GEO bulk
485 root - 08% oxygen - 30min -0.45 >More info 0.70 >More info root - 21% oxygen - 30min Original data GEO bulk
486 Shoot apex inflorescence (after bolting) -0.41 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages