4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on rosette Light Wounded
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List of experiments correlated with "rosette Light Wounded"  Help Download transcriptome of top 30
Score Experiment Correlation from
rosette Light Wounded		 Correlation to
rosette Light Wounded		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 rosette Light Wounded 1.00 >More info 1.00 >More info rosette Light Control Original data GEO bulk
2 rosette Dark Wounded 0.89 >More info 0.92 >More info rosette Dark Control Original data GEO bulk
3 Rsch 8h 0.78 >More info 0.86 >More info Rsch CA Leaves Original data
4 leaf13 0.81 >More info 0.81 >More info unwounded leaves none Original data GEO bulk
5 Wounding Stress3 h (shoot) 0.80 >More info 0.81 >More info Stress mock 3 h (shoot) Original data Stress treatments
6 flu 0.78 >More info 0.81 >More info WT Col Original data GEO bulk
7 flu over-tAPX 0.79 >More info 0.80 >More info WT Col Original data GEO bulk
8 Pst-DC3000(avrRpm1)-4hpi 0.74 >More info 0.78 >More info Pst-DC3000-4hpi Original data GEO bulk
9 WT flg22 2h 0.72 >More info 0.78 >More info WT 0h Leaf tissue Original data GEO bulk
10 Te 8h 0.74 >More info 0.75 >More info Te CA Leaves Original data
11 Leafminer locally damaged thaliana seedlings 0.79 >More info 0.70 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
12 AvrRpt2 Col-0 6hpi 0.77 >More info 0.71 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
13 anac017-2 AntimycinA 3h -0.74 >More info -0.74 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
14 Col 1d 0.72 >More info 0.76 >More info Col CA Leaves Original data
15 current injection 0.67 >More info 0.81 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
16 Methyl Jasmonate 1 h 0.71 >More info 0.77 >More info Mock 1 h Original data Basic hormone treatment of seedlings
17 Col-Luc WT 3h antimycin A 0.76 >More info 0.71 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
18 chito-octamer 0.74 >More info 0.72 >More info Col Mock Original data GEO bulk
19 WT+chitooctaose 0.72 >More info 0.74 >More info WT+water chitooctaose seedlings Original data GEO bulk
20 ataf1-1 mutant Col-0 Bgh inoculated 0.76 >More info 0.70 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
21 HopZ1a treated 0.77 >More info 0.69 >More info col Original data GEO bulk
22 Rsch 1d 0.67 >More info 0.78 >More info Rsch CA Leaves Original data
23 Col leaf 100mM NaCl 0.75 >More info 0.70 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
24 Col leaf 100mM NaCl 0.75 >More info 0.70 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
25 Col 100mM NaCl 0.75 >More info 0.70 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
26 WT flg22 1h 0.69 >More info 0.76 >More info WT 0h Leaf tissue Original data GEO bulk
27 Col 8h 0.69 >More info 0.76 >More info Col CA Leaves Original data
28 WT seedlings MV 0.75 >More info 0.69 >More info WT seedlings control Seedlings Original data GEO bulk
29 miR393 flg22 1h 0.66 >More info 0.77 >More info WT 0h Leaf tissue Original data GEO bulk
30 seedlings protease IV 0.68 >More info 0.75 >More info seedlings nontreated control whole seedling Original data
31 Cycloheximide 3 h 0.73 >More info 0.70 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
32 ulp1c ulp1d +Pto 0.73 >More info 0.70 >More info ulp1c ulp1d mock Original data GEO bulk
33 WT 6H Cold 0.70 >More info 0.73 >More info WT control Original data GEO bulk
34 WT Col-0 Bgh inoculated 0.73 >More info 0.70 >More info WT Col-0 Un-inoculated Original data GEO bulk
35 Laer Flg22+GA 1h 0.70 >More info 0.72 >More info Laer Control leaf discs Original data GEO bulk
36 col-5 hrpA 12h 0.72 >More info 0.70 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
37 WT NAA/flg 1h 0.67 >More info 0.74 >More info WT 0h Leaf tissue Original data GEO bulk
38 Leaf wounded 0.66 >More info 0.75 >More info Leaf control vegetative leaf Original data GEO bulk
39 chito-tetramer 0.71 >More info 0.70 >More info Col Mock Original data GEO bulk
40 Selenate (root) 0.71 >More info 0.70 >More info Ws (root) Original data GEO bulk
41 Root Selenate 0.71 >More info 0.70 >More info Root control 40 micromolar selenate Root Original data GEO bulk
42 col-5 DC3000-avrRpm 4h 0.69 >More info 0.72 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
43 hrcC 0.72 >More info 0.68 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
44 AtLysM RLK1 mutant chitooctaose -0.72 >More info -0.68 >More info WT chitooctaose Original data GEO bulk
45 WT-Dry 0.66 >More info 0.74 >More info WT-CK dehydration treatment 1h Original data
46 HopZ1a treated ulp1c ulp1d 0.75 >More info 0.65 >More info col Original data GEO bulk
47 col-5 DC3000 12h 0.71 >More info 0.69 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
48 Atss3 Light4 -0.69 >More info -0.70 >More info Atss3 Dark0.5 Original data GEO bulk
49 Col-0-avrB-6h 0.70 >More info 0.69 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
50 Laer Flg22 1h 0.68 >More info 0.70 >More info Laer Control leaf discs Original data GEO bulk
51 WT AntimycinA 3h 0.69 >More info 0.69 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
52 AFB1 flg22 1h 0.66 >More info 0.71 >More info WT 0h Leaf tissue Original data GEO bulk
53 CMV-A2b mutant 0.68 >More info 0.68 >More info Mock-At Aerial tissues Original data GEO bulk
54 Methyl Jasmonate 0.5 h 0.66 >More info 0.70 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
55 Leafminer damaged seedlings 0.79 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
56 WT 2-4h Xanthomonas 0.62 >More info 0.73 >More info WT T0 Original data GEO bulk
57 oas-a1.1 Cd 24h 0.69 >More info 0.66 >More info Cd 24h root Shoot Original data GEO bulk
58 WT no Pi 0.79 >More info 0.56 >More info WT complete seedlings Original data
59 +1.6 mM Tween 20 1 h. 0.57 >More info 0.78 >More info +distilled water 1 h. Original data GEO bulk
60 WT+H2O2 0.68 >More info 0.66 >More info WT H2O2 Original data GEO bulk
61 bHLH122 ox -0.66 >More info -0.68 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
62 DC3000 7h 0.64 >More info 0.70 >More info Mock 7h DC3000 Original data GEO bulk
63 ein2-1 9 hpi A. brassicicola 0.73 >More info 0.61 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
64 sid2-avrB-6h 0.62 >More info 0.72 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
65 pepr1-1 Pepr2-3 +Pep2 2h -0.69 >More info -0.65 >More info WT +Pep2 2h Pep2 Original data GEO bulk
66 npr1 sni1 SA 0.77 >More info 0.57 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
67 sid2-2 9 hpi A. brassicicola 0.75 >More info 0.59 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
68 aba1 hypocotyl 0.62 >More info 0.71 >More info Ler hypocotyl hypocotyl Original data GEO bulk
69 WT chitooctaose 0.68 >More info 0.65 >More info WT water Original data GEO bulk
70 Col0-PsmES4326-24hpi 0.72 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
71 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.76 >More info 0.55 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
72 Col-0 ozone 0.76 >More info 0.55 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
73 FLIGHT TAGESB plate6 ROOTS 0.61 >More info 0.70 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
74 hrpA 7h 0.65 >More info 0.66 >More info Mock 7h hrpA Original data GEO bulk
75 Cor 10h 0.69 >More info 0.62 >More info Mock 10h Cor Original data GEO bulk
76 gai MeJA 1h -0.75 >More info -0.55 >More info Laer MeJA 1h leaf discs Original data GEO bulk
77 root protoplasts 40 mM NaCl 0.67 >More info 0.63 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
78 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.75 >More info 0.55 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
79 GA 0.64 >More info 0.66 >More info none GA Rosette Original data GEO bulk
80 wt systemic wounding 0.63 >More info 0.67 >More info wt control leaves Original data GEO bulk
81 Flagellin 4 h (leaf) 0.70 >More info 0.60 >More info Mock 4 h (leaf) Original data Elicitor treatments
82 Phaseolicola 2 h (leaf) 0.57 >More info 0.72 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
83 Laer pretreat JA Flg22 1h 0.64 >More info 0.65 >More info Laer pretreat water control leaf discs Original data GEO bulk
84 1 h Light IP RNA -0.60 >More info -0.69 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
85 GST NPP1 4 h (leaf) 0.69 >More info 0.60 >More info Mock 4 h (leaf) Original data Elicitor treatments
86 tunicamycin -0.56 >More info -0.73 >More info DMF Original data GEO bulk
87 ppi2 0.70 >More info 0.59 >More info WT whole plant Original data GEO bulk
88 coronatine 0.73 >More info 0.56 >More info control rosette leaves Original data
89 abi1 hypocotyl 0.56 >More info 0.72 >More info Ler hypocotyl hypocotyl Original data GEO bulk
90 fls1-3 0.60 >More info 0.68 >More info Col-0 Rosette leaves Original data
91 hrpA fliC 7h 0.68 >More info 0.60 >More info Mock 7h hrpA fliC Original data GEO bulk
92 OsSAP11 expressing -0.60 >More info -0.68 >More info WT seedlings Original data GEO bulk
93 DC3000 24h 0.68 >More info 0.60 >More info Mock 24h DC3000 Original data GEO bulk
94 M6PR transgenic leaf 0mM NaCl 0.59 >More info 0.69 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
95 Col-0 under 4 days salt 0.75 >More info 0.52 >More info Col-0 under control 4 days salt treatment rosette Original data
96 miR393 flg22 2h 0.58 >More info 0.69 >More info WT 0h Leaf tissue Original data GEO bulk
97 Te ozone 0.74 >More info 0.53 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
98 Col-0 low oxygen 0.69 >More info 0.58 >More info Col-0 Original data GEO bulk
99 Heat shock optimum 0.62 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
100 35S::MBF1c 0.67 >More info 0.59 >More info control Original data GEO bulk
101 AFB1 flg22 2h 0.66 >More info 0.60 >More info WT 0h Leaf tissue Original data GEO bulk
102 Col-0 flu HL 3h 0.67 >More info 0.59 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
103 Col-0 9 hpi A. brassicicola 0.70 >More info 0.56 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
104 inhibitor A Treated 0.64 >More info 0.62 >More info Negative Control Original data GEO bulk
105 Protoplast Induced 0.53 >More info 0.73 >More info Uninduced Original data GEO bulk
106 Col(gl) 0mM NaCl 0.64 >More info 0.61 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
107 Light 0.68 >More info 0.57 >More info Control Original data GEO bulk
108 ein5-1 ski2-3 0.71 >More info 0.54 >More info Col-0 aerial tissue Original data
109 Col(gl) leaf 0mM NaCl 0.64 >More info 0.61 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
110 erf104-ko Flg22 4h 0.62 >More info 0.63 >More info erf104-ko H2O 4h Original data GEO bulk
111 ex2 flu dark 8hours/30 minute light 0.55 >More info 0.70 >More info col dark 8hours/30 minute light Original data GEO bulk
112 WT resupplied Pi 4h 0.73 >More info 0.52 >More info WT complete seedlings Original data
113 WT 24H Cold 0.61 >More info 0.64 >More info WT control Original data GEO bulk
114 mpk6-ko Flg22 4h 0.66 >More info 0.59 >More info mpk6-ko H2O 4h Original data GEO bulk
115 coi1-16 ein2 sid2 ctrl -0.74 >More info -0.51 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
116 flu dark 8hours/30 minute light 0.47 >More info 0.78 >More info col dark 8hours/30 minute light Original data GEO bulk
117 pap1-D 0.68 >More info 0.56 >More info Col-0 aerial part Original data
118 Col ozone 3h 0.56 >More info 0.68 >More info Col clean-air 3h ozone Original data GEO bulk
119 CMP 4hr 0.65 >More info 0.59 >More info Acetone 4hr root Original data GEO bulk
120 npr1 sni1 brca2a SA -0.72 >More info -0.52 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
121 Laer pretreat GA+JA Flg22 0h 0.68 >More info 0.55 >More info Laer pretreat water control leaf discs Original data GEO bulk
122 CT101 ozone 0.73 >More info 0.50 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
123 Seedling KUA1-IOX est 0.58 >More info 0.65 >More info Seedling KUA1-IOX mock Original data
124 M6PR transgenic 0mM NaCl 0.65 >More info 0.58 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
125 Pto inoculated 0.71 >More info 0.52 >More info col Original data GEO bulk
126 Botrytis cinerea 48h 0.72 >More info 0.51 >More info control 48h Original data GEO bulk
127 Cold Stress 24 h (shoot) 0.63 >More info 0.60 >More info Stress mock 24 h (shoot) Original data Stress treatments
128 gun1gun5 far-red pretreated -0.61 >More info -0.62 >More info WT far-red pretreated Original data GEO bulk
129 35S:RPS4 eds1-2 8h -0.66 >More info -0.57 >More info 35S:RPS4 8h leaves Original data
130 ice1 control 0.61 >More info 0.61 >More info WT control Original data GEO bulk
131 Dex-rga(delta17) 4h GA4+DEX -0.60 >More info -0.62 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
132 irradiated leaf (WT 5d) 0.70 >More info 0.52 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
133 9 hr Hypoxia 1 hr recovery IP RNA 0.72 >More info 0.50 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
134 35S:RPS4 eds1-2 2h -0.53 >More info -0.68 >More info 35S:RPS4 2h leaves Original data
135 Atss3 Dark8 -0.65 >More info -0.56 >More info Atss3 Dark0.5 Original data GEO bulk
136 1 h Light Total RNA -0.56 >More info -0.65 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
137 WT 3H Cold 0.46 >More info 0.75 >More info WT control Original data GEO bulk
138 4C 2h(SOIL) 0.42 >More info 0.79 >More info 4C 0h(SOIL) Original data GEO bulk
139 WT 90-105 min Xanthomonas 0.53 >More info 0.67 >More info WT T0 Original data GEO bulk
140 E.coli TUV86 2 fliC 7h 0.61 >More info 0.59 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
141 Infected pft1 leaf 0.51 >More info 0.69 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
142 C24 ozone 0.72 >More info 0.48 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
143 Cd 24h root -0.62 >More info -0.58 >More info WT-Untreated Shoot Original data GEO bulk
144 rosette leaves lcr 0.60 >More info 0.60 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
145 leaf blade in D 0.57 >More info 0.63 >More info leaf blade in WL leaf blades Original data GEO bulk
146 Laer pretreat GA Flg22 1h 0.49 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
147 rao2 H2O2 3h -0.69 >More info -0.50 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
148 coi1-16 ein2 sid2 ozone 0.71 >More info 0.48 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
149 Fenclorim 4hr 0.64 >More info 0.54 >More info Acetone 4hr root Original data GEO bulk
150 wnk8-2 untreated -0.51 >More info -0.67 >More info Col-0 untreated seedlings Original data GEO bulk
151 Ws 100mM NaCl 0.60 >More info 0.58 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
152 atmospheric CO2 high Mg shoot 0.73 >More info 0.45 >More info atmospheric CO2 normal Mg shoot Shoot Original data
153 Ws leaf 100mM NaCl 0.60 >More info 0.58 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
154 DFPM 0.60 >More info 0.58 >More info control Original data GEO bulk
155 gpa1 -ABA GC -0.47 >More info -0.71 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
156 oligomycin 4 h 0.62 >More info 0.55 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
157 msh1 albino 0.70 >More info 0.47 >More info WT aerial part Original data GEO bulk
158 myb61 xylem 0.55 >More info 0.62 >More info wt xylem xylem Original data GEO bulk
159 SOS1 0mM NaCl 0.68 >More info 0.49 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
160 HARAP hypoxic 0.63 >More info 0.54 >More info hypoxic hypoxia Original data GEO bulk
161 proline -0.54 >More info -0.63 >More info noneHS Original data GEO bulk
162 Laer Flg22+GA 2h 0.62 >More info 0.54 >More info Laer Control leaf discs Original data GEO bulk
163 Cor hrpS 10h 0.68 >More info 0.48 >More info Mock 10h Cor hrpS Original data GEO bulk
164 WUSp cells 0.64 >More info 0.52 >More info Protoplast Induced Original data GEO bulk
165 dTLEc systemic wounding -0.54 >More info -0.61 >More info wt systemic wounding leaves Original data GEO bulk
166 short 8-degree- 0.58 >More info 0.57 >More info control short Original data GEO bulk
167 whole roots 140 mM NaCl 30 minutes 0.54 >More info 0.61 >More info whole roots standard Original data GEO bulk
168 root callus inducing medium 96 h -0.70 >More info -0.45 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
169 Shoot -K 0.68 >More info 0.47 >More info Control-shoot Original data GEO bulk
170 K starvation (shoot) 0.68 >More info 0.47 >More info Ws (shoot) Original data GEO bulk
171 atr mock 0.71 >More info 0.44 >More info WT mock shoot apical meristem Original data
172 aox1a:rpoTmp MLD stressed -0.64 >More info -0.50 >More info WT(Col0) MLD stressed (control aox1a:rpoTmp) leaf Original data
173 Transgenic LEC2GR Seedling 1h Dex 0.61 >More info 0.53 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
174 Methyl Jasmonate 3 h 0.59 >More info 0.55 >More info Mock 3 h Original data Basic hormone treatment of seedlings
175 shoots bhlh100/101 0uM Fe 0.64 >More info 0.50 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
176 E.coli 0157 H7 7h 0.56 >More info 0.58 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
177 Col-0 37C 0.67 >More info 0.47 >More info Col-0 22C Original data GEO bulk
178 Heat and anoxia 0.60 >More info 0.54 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
179 Te 1d 0.50 >More info 0.64 >More info Te CA Leaves Original data
180 Atss3 Dark4 -0.55 >More info -0.59 >More info Atss3 Dark0.5 Original data GEO bulk
181 CMP 24hr 0.62 >More info 0.52 >More info Acetone 24hr root Original data GEO bulk
182 35S::ERF104 Flg22 4h 0.58 >More info 0.56 >More info 35S::ERF104 H2O 4h Original data GEO bulk
183 myb61 cork 0.47 >More info 0.67 >More info wt cork cork Original data GEO bulk
184 irradiated leaf (cmt 5d) 0.63 >More info 0.50 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
185 Laer pretreat GA+JA Flg22 1h 0.65 >More info 0.48 >More info Laer pretreat water control leaf discs Original data GEO bulk
186 TNT-seedlings 0.54 >More info 0.59 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
187 21h-DC3000 hrpA -0.57 >More info -0.56 >More info 21h-DC3000 leaves Original data GEO bulk
188 elevated CO2 high Mg shoot -0.72 >More info -0.41 >More info atmospheric CO2 high Mg shoot Shoot Original data
189 atgsnor1-3-avrB-6h 0.63 >More info 0.50 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
190 short 10-degree- 0.56 >More info 0.56 >More info control short Original data GEO bulk
191 del1-1 mutant 5d uninfected 0.65 >More info 0.47 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
192 WT NAA/flg 2h 0.51 >More info 0.61 >More info WT 0h Leaf tissue Original data GEO bulk
193 whole roots 140 mM NaCl 1 hour 0.56 >More info 0.56 >More info whole roots standard Original data GEO bulk
194 root stele 40 mM NaCls 0.64 >More info 0.48 >More info root stele Original data GEO bulk
195 WOX1-1 0.59 >More info 0.53 >More info Col-0 aerial part Original data
196 35S:RPS4 rrs1-11 8h -0.54 >More info -0.58 >More info 35S:RPS4 8h leaves Original data
197 shoots bhlh100/101 100uM Fe 0.65 >More info 0.47 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
198 Salt Stress 24 h (root) 0.64 >More info 0.48 >More info Stress mock 24 h (root) Original data Stress treatments
199 pnp1-1 3h +P 0.65 >More info 0.46 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
200 col-5 hrpA 2h 0.55 >More info 0.56 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
201 Laer Alternaria 3dpi -0.61 >More info -0.50 >More info Laer Control leaf discs Original data GEO bulk
202 IAA/inhibitor A Treated 0.60 >More info 0.51 >More info IAA Treated Original data GEO bulk
203 max4 hypocotyl 0.57 >More info 0.54 >More info wt hypocotyl hypocotyl Original data GEO bulk
204 safener treated 0.59 >More info 0.52 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
205 root callus inducing medium 24h -0.69 >More info -0.42 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
206 IXB induced 0.48 >More info 0.63 >More info Methanol IXB Suspension cells Original data GEO bulk
207 P.p 6hai 0.59 >More info 0.51 >More info At-Control roots Original data GEO bulk
208 Dark 3day ivd 0.63 >More info 0.47 >More info 0h ivd Original data
209 ceh1 mutant 0.63 >More info 0.47 >More info Parent line Original data
210 WT-NOCO2 INFECTED 0.63 >More info 0.47 >More info WT-MOCK Original data GEO bulk
211 AgNO3 3 h 0.65 >More info 0.45 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
212 coi1-PsmES4326-24hpi -0.47 >More info -0.63 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
213 root callus inducing medium 48 h -0.69 >More info -0.41 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
214 npr1-1 SA -0.64 >More info -0.45 >More info Col-0 SA complete seedling Original data
215 9 hr Hypoxia 1 hr recovery Total RNA 0.66 >More info 0.43 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
216 efr-1 +elf18 10h -0.53 >More info -0.56 >More info WT +elf18 10h elf18 Original data GEO bulk
217 GiantCell Root -0.55 >More info -0.54 >More info Control Root laser captured giant cells Original data GEO bulk
218 Laer treat paclobutrazol (PAC) 0.62 >More info 0.47 >More info Laer Control leaf discs Original data GEO bulk
219 rcf1-1 cold 12h 0.60 >More info 0.49 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
220 petiole in D 0.52 >More info 0.57 >More info petiole in WL petioles Original data GEO bulk
221 GST 4 h (leaf) 0.58 >More info 0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
222 1h +Pi -0.47 >More info -0.62 >More info 1h -Pi root Original data GEO bulk
223 WT Bc inoculation 14h 0.67 >More info 0.41 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
224 Mutant cry1 (High Light) -0.60 >More info -0.48 >More info Col-0 (High Light) Original data GEO bulk
225 plant (tga2-5-6) 4h OPDA 0.56 >More info 0.52 >More info plant (tga2-5-6) 4h control Original data GEO bulk
226 Leaf systemic 0.53 >More info 0.55 >More info Leaf control vegetative leaf Original data GEO bulk
227 Col whole leaf 7dpi 0.59 >More info 0.49 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
228 root protophloem 40 mM NaCl 0.62 >More info 0.46 >More info root protophloem Original data GEO bulk
229 Col-0-3h IAA 0.68 >More info 0.40 >More info Col-0-0h IAA whole plant Original data GEO bulk
230 gai Control 0.65 >More info 0.43 >More info Laer Control leaf discs Original data GEO bulk
231 vte2 leaves 48h LT 0.67 >More info 0.41 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
232 IMI 4mM 0.71 >More info 0.37 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
233 Sulfometuron EC50 0.63 >More info 0.45 >More info Carrier Original data GEO bulk
234 cry1 high light -0.60 >More info -0.48 >More info Col-O high light Original data GEO bulk
235 35S:RPS4 eds1-2 24h -0.63 >More info -0.44 >More info 35S:RPS4 24h leaves Original data
236 Bur-0-3h IAA 0.64 >More info 0.43 >More info Bur-0h IAA whole plant Original data GEO bulk
237 bZIP1ko mutant N+Light- 0.43 >More info 0.64 >More info WT-sib N+Light- whole plant Original data GEO bulk
238 plant (Col-0) 4h OPDA 0.57 >More info 0.50 >More info plant (Col-0) 4h control Original data GEO bulk
239 OPDA 4 h 0.57 >More info 0.50 >More info Col-0 Original data GEO bulk
240 Seedling-HeatStressed TOTALmRNA 0.57 >More info 0.50 >More info Seedling-control TOTALmRNA seedling Original data
241 JA 0.50 >More info 0.56 >More info Col-0 mock Whole seedling Original data GEO bulk
242 atr mitomycin C 0.61 >More info 0.45 >More info WT mitomycin C shoot apical meristem Original data
243 Hydrogen Peroxide 500 uM 0.50 >More info 0.56 >More info Control RB and PER Hydrogen Peroxide Original data
244 Col-0-1h IAA 0.65 >More info 0.40 >More info Col-0-0h IAA whole plant Original data GEO bulk
245 Dex-rga(delta17) 2h GA4+DEX -0.55 >More info -0.50 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
246 WT 3h -P 0.64 >More info 0.41 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
247 Col-0 SA 0.65 >More info 0.40 >More info Col-0 Original data GEO bulk
248 Col-0 DCA 48h 0.66 >More info 0.39 >More info Col-0 MOCK 48h Original data GEO bulk
249 Col-0 drought 0.52 >More info 0.53 >More info Col-0 control Original data GEO bulk
250 Lipopolysaccaride4 h (leaf) 0.61 >More info 0.44 >More info Mock 4 h (leaf) Original data Elicitor treatments
251 wnk8-1 untreated -0.44 >More info -0.61 >More info Col-0 untreated seedlings Original data GEO bulk
252 wrky33 Bc inoculation 14h 0.70 >More info 0.35 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
253 Mutant gh3.5-1D (AvrRpt2) 0.58 >More info 0.47 >More info Col-0 (AvrRpt2) Original data GEO bulk
254 phr1 phl1 Root-Pi 0.58 >More info 0.47 >More info WT Shoot+Pi roots Original data GEO bulk
255 pXVE:HA-EDM2-a untreated -0.48 >More info -0.57 >More info Col-0 untreated seedlings Original data GEO bulk
256 TA induced 0.48 >More info 0.57 >More info Methanol TA Suspension cells Original data GEO bulk
257 Shoot -Cs 0.51 >More info 0.53 >More info Control-shoot Original data GEO bulk
258 pmr5 pmr6 0.60 >More info 0.44 >More info Col-0 Original data GEO bulk
259 Laer Flg22 2h 0.62 >More info 0.42 >More info Laer Control leaf discs Original data GEO bulk
260 seedling -S Exp 0.46 >More info 0.58 >More info seedling FN Exp seedling Original data
261 dor drought 0.59 >More info 0.44 >More info WT drought Original data GEO bulk
262 Col-0-30min IAA 0.62 >More info 0.41 >More info Col-0-0h IAA whole plant Original data GEO bulk
263 pmr5 0.54 >More info 0.49 >More info Col-0 Original data GEO bulk
264 Seedling-HeatStressed POLYSOMESmRNA 0.54 >More info 0.49 >More info Seedling-control POLYSOMESmRNA seedling Original data
265 seedlings-week-old RECA1-overexpressing
transgenic		 0.54 >More info 0.49 >More info seedlings-week-old Col-0 seedlings Original data
266 P.p 30hai 0.55 >More info 0.48 >More info At-Control roots Original data GEO bulk
267 mkk1/mkk2 24h BTH rep 0.60 >More info 0.43 >More info Col-0 24h BTH rep Original data GEO bulk
268 Laer pretreat JA Flg22 2h 0.60 >More info 0.43 >More info Laer pretreat water control leaf discs Original data GEO bulk
269 pho1 0.60 >More info 0.42 >More info Col2WT Original data GEO bulk
270 ws 24h4c q8ws 0.61 >More info 0.41 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
271 SCR-GR Time 12H Dex 0.53 >More info 0.49 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
272 HSP90 Reduced RNAi-A3 0.56 >More info 0.46 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
273 ckh1 CK200 0.59 >More info 0.43 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
274 inhibitor B Treated 0.51 >More info 0.51 >More info Negative Control Original data GEO bulk
275 ASL9-ox -0.64 >More info -0.38 >More info WT aerial parts of seedlings Original data GEO bulk
276 Chitosan 3h Treatment 0.66 >More info 0.36 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
277 Laer pretreat JA Flg22 0h 0.46 >More info 0.56 >More info Laer pretreat water control leaf discs Original data GEO bulk
278 opr3 JA 2 h 0.36 >More info 0.66 >More info opr3 0 h Original data GEO bulk
279 npr1-3 MOCK 48h -0.69 >More info -0.32 >More info Col-0 MOCK 48h Original data GEO bulk
280 Laer pretreat GA Flg22 0h 0.63 >More info 0.38 >More info Laer pretreat water control leaf discs Original data GEO bulk
281 ein3 eil1 0.55 >More info 0.46 >More info Col-0 mock Whole seedling Original data GEO bulk
282 21h-DC3000 avrRpm1 -0.54 >More info -0.47 >More info 21h-DC3000 leaves Original data GEO bulk
283 IRP1-OE-Ctrl--root 0.52 >More info 0.49 >More info COL-0-Ctrl--root root Original data
284 ref6-1 0.51 >More info 0.50 >More info Col whole seedling Original data GEO bulk
285 ARR22-ox (t-zeatin 3 h) 0.65 >More info 0.36 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
286 WT 24h cold 0.55 >More info 0.45 >More info WT warm 24h cold entire aerial part Original data GEO bulk
287 axr1 hypocotyl 0.52 >More info 0.48 >More info wt hypocotyl hypocotyl Original data GEO bulk
288 bZIP1ko mutant N+Light+ 0.61 >More info 0.39 >More info WT-sib N+Light+ whole plant Original data GEO bulk
289 seedling 12h after HZE WT 0.57 >More info 0.43 >More info seedling day 1 unirradiated WT 12h Original data
290 Mutant coi1(leaf) -0.50 >More info -0.50 >More info Col-0 (leaf) Original data GEO bulk
291 LTN008-2 aza-dc 0.63 >More info 0.37 >More info LTN012-2 Mock Original data
292 penta Alternaria 3dpi 0.59 >More info 0.41 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
293 Bur-0-30min IAA 0.60 >More info 0.40 >More info Bur-0h IAA whole plant Original data GEO bulk
294 8h-DC3000 hrpA 0.37 >More info 0.63 >More info 8h-DC3000 leaves Original data GEO bulk
295 coi1-2 0.46 >More info 0.54 >More info Col-0 mock Whole seedling Original data GEO bulk
296 sfr2 control -0.45 >More info -0.55 >More info WT control All aerial tissue Original data GEO bulk
297 RRE2 Chitin 0.57 >More info 0.42 >More info Chitin Original data GEO bulk
298 CLO 4mM 0.63 >More info 0.36 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
299 CBF3 0mM NaCl 0.51 >More info 0.48 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
300 CMV-WT 0.62 >More info 0.37 >More info Mock-At Aerial tissues Original data GEO bulk
301 Col-0 low oxygen 0.55 >More info 0.44 >More info Col-0 control low oxygen root Original data GEO bulk
302 P.p 10.5hai 0.54 >More info 0.45 >More info At-Control roots Original data GEO bulk
303 anac017-1 H2O2 3h -0.53 >More info -0.46 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
304 bak1-3 +Pep2 10h 0.56 >More info 0.43 >More info WT +Pep2 10h Pep2 Original data GEO bulk
305 P.p 2.5hai 0.53 >More info 0.46 >More info At-Control roots Original data GEO bulk
306 pnp1-1 1wk +P 0.69 >More info 0.30 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
307 Leafminer systemically damaged thaliana seedlings 0.53 >More info 0.46 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
308 Col-0 C2H4 24h 0.56 >More info 0.43 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
309 atr zebularine 0.65 >More info 0.34 >More info WT zebularine shoot apical meristem Original data
310 HSP90 Reduced RNAi-A2 0.57 >More info 0.42 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
311 P.syringae AvrRpt2 4 h (leaf) 0.49 >More info 0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
312 rosettes WT drought 0.49 >More info 0.50 >More info rosettes WT watered Original data GEO bulk
313 6h volatiles Sp. HRO-C48 0.39 >More info 0.60 >More info 6h untreated whole seedling Original data GEO bulk
314 WT +elf18 2h 0.46 >More info 0.53 >More info WT untreated elf18 Original data GEO bulk
315 root callus inducing medium 12 h -0.62 >More info -0.36 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
316 RGA-GR-DEX 0.31 >More info 0.67 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
317 mkk2 24h BTH rep 0.45 >More info 0.53 >More info Col-0 24h BTH rep Original data GEO bulk
318 opr3 JA 0.5 h 0.28 >More info 0.70 >More info opr3 0 h Original data GEO bulk
319 Col 3d 0.41 >More info 0.57 >More info Col CA Leaves Original data
320 SHR-GR Time 1H Dex 0.56 >More info 0.41 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
321 15m.KCl 0.46 >More info 0.51 >More info To. KCl 14 day old Roots Original data GEO bulk
322 OsRLCK253 expressing -0.40 >More info -0.57 >More info WT seedlings Original data GEO bulk
323 ani1 T0.5 -0.39 >More info -0.58 >More info WT T0.5 root tissue Original data GEO bulk
324 cpr5scv1 0.56 >More info 0.40 >More info WT(COL) Original data GEO bulk
325 arf2 brz -0.56 >More info -0.40 >More info arf2 mock Original data GEO bulk
326 seedling 24h after HZE WT 0.67 >More info 0.29 >More info seedling day 2 unirradiated WT 24h Original data
327 9 hr Hypoxia IP RNA 0.53 >More info 0.43 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
328 WT +elf18 10h 0.51 >More info 0.45 >More info WT untreated elf18 Original data GEO bulk
329 gh3.5-1D 48 hpi 0.61 >More info 0.35 >More info Col-0 uninoculated Original data GEO bulk
330 Laer pretreat GA+JA Flg22 2h 0.59 >More info 0.37 >More info Laer pretreat water control leaf discs Original data GEO bulk
331 aba2 1% sucrose 12-day-old 0.52 >More info 0.44 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
332 Cold Stress 24 h (root) 0.55 >More info 0.41 >More info Stress mock 24 h (root) Original data Stress treatments
333 Bur-0-1h IAA 0.57 >More info 0.39 >More info Bur-0h IAA whole plant Original data GEO bulk
334 1.5 hr ammonium 0.46 >More info 0.50 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
335 16C 10h 0.40 >More info 0.55 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
336 Osmotic Stress 24 h (shoot) 0.57 >More info 0.38 >More info Stress mock 24 h (shoot) Original data Stress treatments
337 ataf1-1 mutant Col-0 Un-inoculated -0.54 >More info -0.41 >More info WT Col-0 Un-inoculated Original data GEO bulk
338 Heat shock 20%Inhibition 0.53 >More info 0.42 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
339 SA 4mM 0.57 >More info 0.38 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
340 35S:VND7-VP16-GR+CHX 0.35 >More info 0.60 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
341 Kas-1 -Fe 24h -0.45 >More info -0.50 >More info Kas-1 +Fe 24h roots Original data GEO bulk
342 Kas -Fe 24h Roots -0.45 >More info -0.50 >More info Kas +Fe 24h Roots Original data GEO bulk
343 Rsch 3d 0.33 >More info 0.62 >More info Rsch CA Leaves Original data
344 5-Triiodobenzoic acid3 h 0.55 >More info 0.39 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
345 Laer MeJA 1h 0.56 >More info 0.38 >More info Laer Control leaf discs Original data GEO bulk
346 short 12-degree- 0.51 >More info 0.43 >More info control short Original data GEO bulk
347 Salt Stress 24 h (shoot) 0.57 >More info 0.37 >More info Stress mock 24 h (shoot) Original data Stress treatments
348 pad4-PsmES4326-24hpi -0.50 >More info -0.44 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
349 Nicotinamide-53hr 0.57 >More info 0.37 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
350 root Dosed gold 0.57 >More info 0.37 >More info root No gold .125 mM gold 24 h roots Original data
351 camta1/2 warm -0.51 >More info -0.43 >More info WT 24h cold entire aerial part Original data GEO bulk
352 Anoxia 0.51 >More info 0.43 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
353 FHY3p dark+DEX -0.51 >More info -0.43 >More info FHY3p dark+mock Original data GEO bulk
354 0.125 mM gold 24 h 0.57 >More info 0.37 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
355 anac017-2 H2O2 3h -0.61 >More info -0.33 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
356 FLIGHT TAGESB plate 0.63 >More info 0.31 >More info GROUND CONTROL TAGESB plate Original data
357 petiole in FRD 0.44 >More info 0.50 >More info petiole in WL petioles Original data GEO bulk
358 Te 3d 0.36 >More info 0.58 >More info Te CA Leaves Original data
359 shoot-10 μM DEX- 3 hr 0.41 >More info 0.53 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
360 Mutant lwd1_lwd2 0.54 >More info 0.39 >More info Wildtype for phy mutants Original data GEO bulk
361 Atss3 Light1 -0.54 >More info -0.39 >More info Atss3 Dark0.5 Original data GEO bulk
362 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.54 >More info 0.39 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
363 shoots WT 0uM Fe 0.53 >More info 0.40 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
364 nia1nia2 0.53 >More info 0.40 >More info Col-0 whole seedlings Original data GEO bulk
365 MYB12OX 0.54 >More info 0.39 >More info Col-0 aerial part Original data
366 vtc1-1 -0.38 >More info -0.55 >More info Col-0 whole plant Original data GEO bulk
367 Fenclorim 24hr 0.52 >More info 0.41 >More info Acetone 24hr root Original data GEO bulk
368 Nicotinamide-77hr 0.51 >More info 0.42 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
369 myb50 xylem 0.59 >More info 0.34 >More info wt xylem xylem Original data GEO bulk
370 WT +Pep2 2h 0.58 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
371 Col whole leaf 5dpi 0.52 >More info 0.41 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
372 Nicotinamide-57hr 0.59 >More info 0.34 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
373 cat2-2; 8h switch to ambient CO2 concentrations; 0.36 >More info 0.57 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
374 shoot-10 μM DEX- 6 hr 0.34 >More info 0.59 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
375 npr1 sni1 ssn2 SA -0.54 >More info -0.38 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
376 35:SUB1A 0.53 >More info 0.39 >More info WT whole seedling Original data GEO bulk
377 1hr-pH4.5 0.40 >More info 0.52 >More info 1hr-pH6 1hr pH 4.5 roots Original data GEO bulk
378 M6PR transgenic leaf 100mM NaCl -0.57 >More info -0.35 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
379 naxillin 3h 0.42 >More info 0.50 >More info before treatment naxillin root Original data GEO bulk
380 sta1 0.51 >More info 0.40 >More info WT Original data GEO bulk
381 ex1 flu dark 8hours/30 minute light 0.26 >More info 0.65 >More info col dark 8hours/30 minute light Original data GEO bulk
382 wrky72-2-MOCK 0.40 >More info 0.51 >More info WT-MOCK Original data GEO bulk
383 Mutant siz1-3 (Drought) 0.58 >More info 0.33 >More info Col-0 (Drought) Original data GEO bulk
384 penta Pst DC3000 12hpi 0.62 >More info 0.29 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
385 siz1-3 drought 0.58 >More info 0.33 >More info Col-0 drought Original data GEO bulk
386 Elevated CO2 fully expanded leaf 0.56 >More info 0.34 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
387 WT-SA 0.55 >More info 0.35 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
388 Nicotinamide-65hr 0.53 >More info 0.37 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
389 Col-0 Flg22 4h 0.39 >More info 0.51 >More info Col-0 H2O 4h Original data GEO bulk
390 seedling 6h after HZE WT 0.56 >More info 0.33 >More info seedling day 1 unirradiated WT 6h Original data
391 UV 0.54 >More info 0.35 >More info WT aerial region Original data GEO bulk
392 12m.KCl 0.38 >More info 0.51 >More info To. KCl 14 day old Roots Original data GEO bulk
393 WT Shoot-Pi 0.59 >More info 0.30 >More info WT Shoot+Pi shoots Original data GEO bulk
394 4C 1h 0.18 >More info 0.71 >More info 4C 0h Original data GEO bulk
395 Rose Bengal 0.5 uM 0.32 >More info 0.57 >More info Control RB and PER Rose Bengal Original data
396 WT cold 0.54 >More info 0.34 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
397 sfr6 drought -0.34 >More info -0.54 >More info WT drought All aerial tissue Original data GEO bulk
398 pistil 0.5HAP 0.63 >More info 0.25 >More info unpollinated pistil pistil Original data GEO bulk
399 WT 30μM arsenate 8 hours. 0.51 >More info 0.37 >More info WT control (not supplemented). Original data
400 mkk1/mkk2 control rep 0.53 >More info 0.35 >More info Col-0 Time 0 rep Original data GEO bulk
401 Col BTH 0.21 >More info 0.67 >More info Col rosettes Original data GEO bulk
402 spx1 spx2 no Pi 0.56 >More info 0.31 >More info WT no Pi seedlings Original data
403 NJ15 0.56 >More info 0.31 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
404 Nicotinamide-85hr 0.50 >More info 0.37 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
405 GRX-overexpression seedlings MV -0.59 >More info -0.28 >More info WT seedlings MV Seedlings Original data GEO bulk
406 atmyc2 Seedling BL+ABA -0.35 >More info -0.52 >More info WT Seedling BL+ABA Original data GEO bulk
407 Roots Cd -0.55 >More info -0.31 >More info Roots control Cd Root Original data GEO bulk
408 mil4 BTH 0.52 >More info 0.34 >More info Col BTH rosettes Original data GEO bulk
409 JA 3h 0.20 >More info 0.66 >More info EtOH 3h 3hr Original data GEO bulk
410 short 14-degree- 0.50 >More info 0.36 >More info control short Original data GEO bulk
411 oligomycin 1 h 0.35 >More info 0.51 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
412 atmyc2 Seedling BL -0.13 >More info -0.73 >More info WT Seedling BL Original data GEO bulk
413 GO5; 8h switch to ambient CO2 concentrations; 0.36 >More info 0.50 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
414 pnp1-1 1wk -P 0.55 >More info 0.30 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
415 2hr continuous KNO3 ECR cell 0.55 >More info 0.30 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
416 spx1 spx2 complete 0.50 >More info 0.35 >More info WT complete seedlings Original data
417 AsAKiin11 T3 -0.60 >More info -0.25 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
418 AsAKiin11 T1 -0.53 >More info -0.31 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
419 dde2-2 9 hpi A. brassicicola 0.56 >More info 0.28 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
420 rosette leaves fdh 0.53 >More info 0.31 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
421 Nicotinamide-89hr 0.55 >More info 0.29 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
422 phyABDE 4-day dark- 2 hours Rc50 0.17 >More info 0.67 >More info phyABDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
423 Mature callus 0.51 >More info 0.32 >More info Young callus hypocotyls Original data GEO bulk
424 rdr6-15 -0.54 >More info -0.29 >More info Col-0 Original data GEO bulk
425 gpa1-4/agb1-2 clean-air 3h -0.33 >More info -0.50 >More info Col clean-air 3h clean-air Original data GEO bulk
426 opr3 OPDA 2 h 0.20 >More info 0.63 >More info opr3 0 h Original data GEO bulk
427 rli 0.50 >More info 0.32 >More info WT whole plant Original data GEO bulk
428 cs26 short-day -0.56 >More info -0.25 >More info Leaves-WT-SD leaf Original data GEO bulk
429 WT powdery mildew 0.52 >More info 0.29 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
430 camta1 root water -0.52 >More info -0.29 >More info Col-0 root water root Original data GEO bulk
431 csn5 (csn5a-2 csn5b) light 0.55 >More info 0.26 >More info WT light Original data GEO bulk
432 dcl1-7 0.54 >More info 0.27 >More info Ler Original data GEO bulk
433 aln-1 0.64 >More info 0.16 >More info Col-0 Aerial part of seedlings Original data
434 wrky33 mock 0.66 >More info 0.14 >More info WT mock 14 hour mock control leaves Original data
435 IAA7mII over-expressor IAA Treated 0.11 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
436 toc1-1-77hr 0.64 >More info 0.15 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
437 downy mildew cotyledons late stage 0.65 >More info 0.14 >More info mock inoculated Cotyledons Original data GEO bulk
438 P35S:rGRF3 0.58 >More info 0.21 >More info WS Original data GEO bulk
439 hst5 0.58 >More info 0.20 >More info Col-0 Original data GEO bulk
440 Truncated AC2 T2 -0.53 >More info -0.25 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
441 hsfa1 quadruple mutant 0.55 >More info 0.23 >More info WT (Col-0) whole seedling Original data GEO bulk
442 B.cinerea 18 h infection 0.65 >More info 0.13 >More info Mock 18 h Original data Botrytis cinerea infection
443 Botrytis cinerea 18h 0.65 >More info 0.13 >More info control 18h Original data GEO bulk
444 Nicotinamide-73hr 0.50 >More info 0.28 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
445 Col in Pi deficiency medium 0.20 >More info 0.58 >More info Col in control medium root Original data GEO bulk
446 arr-dmso-sample 0.61 >More info 0.16 >More info Wt-dmso-sample seedling Original data
447 AtMYB30-ox 2-4h Xanthomonas 0.50 >More info 0.27 >More info WT 2-4h Xanthomonas Original data GEO bulk
448 Nicotinamide-61hr 0.53 >More info 0.24 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
449 vte2-1 3d vernalization 0.50 >More info 0.27 >More info WT 3d vernalization Original data GEO bulk
450 IRP1-OE-Fe--shoot 0.60 >More info 0.17 >More info COL-0-Fe--shoot shoot Original data
451 6h volatiles Sm. R3089 0.23 >More info 0.54 >More info 6h untreated whole seedling Original data GEO bulk
452 penta Flg22 2h 0.56 >More info 0.20 >More info Laer Flg22 2h leaf discs Original data GEO bulk
453 control leaf (cmt 5d) -0.51 >More info -0.25 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
454 gpa1 +ABA GC -0.20 >More info -0.56 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
455 agb1 gpa1 +ABA GC -0.18 >More info -0.57 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
456 Nicotinamide-81hr 0.53 >More info 0.21 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
457 cop1 Seedling BL+ABA 0.51 >More info 0.23 >More info WT Seedling BL+ABA Original data GEO bulk
458 A2hsfa1-ox in quadruple mutant -0.57 >More info -0.16 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
459 col-5 DC3000 4h 0.19 >More info 0.54 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
460 stn7-1 -0.64 >More info -0.08 >More info Col-0 rosette leaves Original data GEO bulk
461 gpa1-4/agb1-2 ozone 2d -0.07 >More info -0.65 >More info Col ozone 2d ozone Original data GEO bulk
462 efr-1 untreated -0.20 >More info -0.52 >More info WT untreated untreated Original data GEO bulk
463 dorn1-1 Root 100 mM ATP 30 min -0.15 >More info -0.57 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
464 WT Nitrate 0.5h 0.50 >More info 0.21 >More info WT untreated Original data GEO bulk
465 WT roots - Fe 0.53 >More info 0.18 >More info WT roots + Fe Roots Original data GEO bulk
466 edr1 18 h powdery mildew 0.54 >More info 0.16 >More info Col-0 18 h powdery mildew Original data GEO bulk
467 rdr2-1 -0.51 >More info -0.19 >More info Col-0 Original data GEO bulk
468 abh1 -ABA 0.20 >More info 0.50 >More info Col-0 -ABA Original data GEO bulk
469 irradiated leaf (WT 1d) 0.52 >More info 0.17 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
470 seedlings +5AC 0.51 >More info 0.17 >More info control seedlings 10-day old whole seedling Original data GEO bulk
471 35S:RPS4 rrs1-11 24h -0.54 >More info -0.14 >More info 35S:RPS4 24h leaves Original data
472 GST-overexpression seedlings control 0.52 >More info 0.16 >More info WT seedlings control Seedlings Original data
473 siliques AtHb1 control 0.16 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
474 HairpinZ 4 h (leaf) 0.71 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
475 HARAP aerobic -0.11 >More info -0.56 >More info WT aerobic aerobic Original data GEO bulk
476 rdr1-1 -0.57 >More info -0.10 >More info Col-0 Original data GEO bulk
477 WT 1wk -P 0.56 >More info 0.10 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
478 toc1-1-53hr 0.51 >More info 0.14 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
479 G3P -0.11 >More info -0.54 >More info Mock distal leaves Original data GEO bulk
480 ga1-3/brm-1 0.52 >More info 0.12 >More info wt shoots Original data GEO bulk
481 Col-0 24hpi A. brassicicola 0.62 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
482 triploid female excess 0.01 >More info -0.65 >More info tetraploid Original data GEO bulk
483 penta MeJA 1h 0.61 >More info 0.02 >More info Laer MeJA 1h leaf discs Original data GEO bulk
484 3x(m) 0.00 >More info 0.63 >More info 2x two week old seedlings Original data
485 Infected Col-0 leaf -0.53 >More info -0.09 >More info Mock Col-0 leaf F. oxysporum leaf Original data GEO bulk
486 WT Root-Pi 0.51 >More info 0.10 >More info WT Root+Pi roots Original data GEO bulk
487 Shoot P recovery 0.52 >More info 0.09 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
488 Mh0 UV -0.51 >More info -0.08 >More info Mh0 mock UV seedling Original data
489 35S:ATR1 like miR -0.50 >More info -0.09 >More info WT for miR Original data GEO bulk
490 siliques WT hypoxia 0.58 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
491 P.syringae vir 4 h (leaf) 0.57 >More info 0.02 >More info Mock 4 h (leaf) Original data Elicitor treatments
492 TaFLS overexpression line (OE1) -0.00 >More info 0.59 >More info Col-0 Rosette leaves Original data
493 FLIGHT TAGESB plate6 SHOOTS 0.52 >More info 0.06 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
494 glk1 glk2 GLK1-GR +DEX 4h -0.02 >More info -0.56 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
495 CLV3n cells 0.50 >More info 0.05 >More info Protoplast Induced Original data GEO bulk
496 sex4-3 -0.54 >More info -0.01 >More info Col-WT leaves Original data GEO bulk
497 P. infestans 6 h (leaf) 0.69 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
498 Atwrky63 -0.51 >More info -0.02 >More info Col0 none leaf Original data GEO bulk
499 Col PSTDC3000 24h 0.66 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
500 seedling 3h after HZE WT 0.50 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
501 Light 3day wt -0.50 >More info -0.01 >More info 0h wt Original data
502 bri1-116 -0.22 >More info 0.73 >More info Col seedling Original data GEO bulk
503 seed germinating in countinuous light 24h SL -0.16 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
504 nhx6 0.51 >More info -0.04 >More info WT Rosette leaf Original data GEO bulk
505 CCA1-ox 6am non-polysomal -0.06 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
506 Shoot apex inflorescence (after bolting) -0.24 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
507 eds16 whole leaf 3dpi -0.17 >More info 0.58 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
508 treated group 0.50 >More info -0.10 >More info Control group Original data
509 epiF3 -0.13 >More info 0.53 >More info WT Col-0 aerial part Original data
510 spx1 spx2 resupplied Pi 4h -0.55 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
511 swn-7 -0.58 >More info 0.41 >More info Col whole plant Original data GEO bulk