4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on epiF3
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List of experiments correlated with "epiF3"  Help Download transcriptome of top 30
Score Experiment Correlation from
epiF3		 Correlation to
epiF3		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 epiF3 1.00 >More info 1.00 >More info WT Col-0 aerial part Original data
2 SOS1 100mM NaCl -0.79 >More info -0.69 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
3 M6PR transgenic 100mM NaCl -0.84 >More info -0.61 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
4 vtc1 (II) -0.69 >More info -0.60 >More info Col (II) rosette Original data GEO bulk
5 Col whole leaf 1dpi 0.50 >More info 0.75 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
6 SOS1 0mM NaCl -0.67 >More info -0.57 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
7 HARAP aerobic 0.50 >More info 0.74 >More info WT aerobic aerobic Original data GEO bulk
8 35S:RPS4 eds1-2 2h 0.48 >More info 0.75 >More info 35S:RPS4 2h leaves Original data
9 M6PR transgenic 0mM NaCl -0.70 >More info -0.52 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
10 AmGSTF1 expressor -0.61 >More info -0.61 >More info WT leaf tissue Original data GEO bulk
11 npr1 sni1 brca2a SA 0.49 >More info 0.73 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
12 eif3h polysome 0.69 >More info 0.52 >More info WT polysome Original data GEO bulk
13 hsfa1 quadruple mutant 0.65 >More info 0.56 >More info WT (Col-0) whole seedling Original data GEO bulk
14 Col-0 drought 0.59 >More info 0.61 >More info Col-0 control Original data GEO bulk
15 Laer pretreat JA Flg22 0h 0.45 >More info 0.75 >More info Laer pretreat water control leaf discs Original data GEO bulk
16 Homozygous-AtcesA6 0.46 >More info 0.74 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
17 camta2/3 warm -0.52 >More info -0.67 >More info WT warm entire aerial part Original data GEO bulk
18 wt systemic wounding 0.55 >More info 0.64 >More info wt control leaves Original data GEO bulk
19 camta1/3 warm -0.49 >More info -0.69 >More info WT warm entire aerial part Original data GEO bulk
20 cpr5 -0.59 >More info -0.58 >More info WT(COL) Original data GEO bulk
21 high R/FR JA spray 0.50 >More info 0.66 >More info high R/FR mock spray high R/FR JA spray Original data GEO bulk
22 ws 24h4c q8ws 0.63 >More info 0.53 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
23 eds16 whole leaf 0h UI 0.42 >More info 0.74 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
24 eif3h non-polysome 0.60 >More info 0.51 >More info WT non-polysome Original data GEO bulk
25 A. lyrata 0.50 >More info 0.59 >More info A. thaliana mature leaves before flowering Original data GEO bulk
26 amiRAP aerobic 0.59 >More info 0.49 >More info WT aerobic aerobic Original data GEO bulk
27 camta3-1 -0.36 >More info -0.72 >More info WT Original data GEO bulk
28 A. thaliana-A. lyrata hybrid 0.36 >More info 0.72 >More info A. thaliana mature leaves before flowering Original data GEO bulk
29 Methyl Jasmonate 3 h 0.53 >More info 0.54 >More info Mock 3 h Original data Basic hormone treatment of seedlings
30 4C 2h(SOIL) -0.34 >More info -0.73 >More info 4C 0h(SOIL) Original data GEO bulk
31 4h decapitation 0.50 >More info 0.56 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
32 eds16 whole leaf 6hpi 0.43 >More info 0.62 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
33 cpr5scv1 -0.44 >More info -0.61 >More info WT(COL) Original data GEO bulk
34 short 17-degree- 0.36 >More info 0.68 >More info control short Original data GEO bulk
35 OE WRKY63.3 high light -0.42 >More info -0.62 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
36 rpl24 nonpolysome 0.60 >More info 0.43 >More info WT nonpolysome seedling shoot/aerial seedling Original data
37 Mutant ufo-1(flower) -0.48 >More info -0.54 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
38 rosette leaves bdg 0.29 >More info 0.73 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
39 INA -0.39 >More info -0.63 >More info CK INA seedling Original data
40 PstDC3000 48h -0.27 >More info -0.74 >More info WT untreated 48hr leaf Original data GEO bulk
41 Homozygous-AtcesA4 0.43 >More info 0.58 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
42 vtc2 (I) -0.36 >More info -0.65 >More info Col (I) rosette Original data GEO bulk
43 shoot-10 μM DEX- 3 hr 0.43 >More info 0.58 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
44 rpl24 total 0.61 >More info 0.39 >More info WT total seedling shoot/aerial seedling Original data
45 cpr5npr1svi1 -0.49 >More info -0.51 >More info WT(COL) Original data GEO bulk
46 JA 3h 0.40 >More info 0.59 >More info EtOH 3h 3hr Original data GEO bulk
47 rpl24 polysome 0.61 >More info 0.37 >More info WT polysome seedling shoot/aerial seedling Original data
48 coi1-PsmES4326-24hpi -0.53 >More info -0.45 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
49 Distal half (leaf7) -0.47 >More info -0.51 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
50 eds16 whole leaf 3dpi 0.25 >More info 0.73 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
51 ein2-1 24hpi A. brassicicola 0.38 >More info 0.60 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
52 cpr5npr1 -0.55 >More info -0.42 >More info WT(COL) Original data GEO bulk
53 toc1-1-73hr -0.38 >More info -0.59 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
54 Mt 0.59 >More info 0.37 >More info Col-0 Original data GEO bulk
55 ulp1c ulp1d +Pto 0.62 >More info 0.34 >More info ulp1c ulp1d mock Original data GEO bulk
56 35S:RPS4 eds1-2 T0 0.22 >More info 0.74 >More info 35S:RPS4 T0 leaves Original data
57 Col-0 (t-zeatin 3 h) 0.43 >More info 0.52 >More info Col-0 Original data Cytokinin treatment of seedlings
58 sdg8-2 mutant 0.43 >More info 0.52 >More info wild type leaf Original data GEO bulk
59 myb61 xylem -0.31 >More info -0.64 >More info wt xylem xylem Original data GEO bulk
60 sid2-2 24hpi A. brassicicola 0.33 >More info 0.62 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
61 abi4-102 (II) -0.54 >More info -0.40 >More info Col (II) rosette Original data GEO bulk
62 Leafminer damaged seedlings 0.38 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
63 Rosette leaf No2 -0.44 >More info -0.50 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
64 Col-0 INA 48h -0.31 >More info -0.63 >More info Col-0 MOCK 48h Original data GEO bulk
65 Total RNA 35S:HF-RPL18 cold -0.33 >More info -0.61 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
66 short 10-degree- 0.37 >More info 0.55 >More info control short Original data GEO bulk
67 irradiated leaf (WT 5d) 0.24 >More info 0.68 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
68 eif3h 0.62 >More info 0.30 >More info WT Original data GEO bulk
69 leaf13 0.59 >More info 0.33 >More info unwounded leaves none Original data GEO bulk
70 ASL9-ox -0.50 >More info -0.42 >More info WT aerial parts of seedlings Original data GEO bulk
71 Col-0 DCA 48h -0.31 >More info -0.61 >More info Col-0 MOCK 48h Original data GEO bulk
72 camta1/2/3 warm -0.42 >More info -0.50 >More info WT warm entire aerial part Original data GEO bulk
73 current injection 0.54 >More info 0.37 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
74 dTLEc systemic wounding -0.37 >More info -0.54 >More info wt systemic wounding leaves Original data GEO bulk
75 GV3101 3hpi -0.28 >More info -0.63 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
76 aba3-1 -0.25 >More info -0.66 >More info wt Original data GEO bulk
77 Tsu 0.61 >More info 0.30 >More info Col-0 Original data GEO bulk
78 Wounding Stress3 h (shoot) 0.58 >More info 0.33 >More info Stress mock 3 h (shoot) Original data Stress treatments
79 Mutant NahG(leaf) 0.40 >More info 0.50 >More info Col-0 (leaf) Original data GEO bulk
80 Col-0 INA 6d -0.26 >More info -0.64 >More info Col-0 MOCK 6d Original data GEO bulk
81 Mutant iaa5_6_19 0.29 >More info 0.61 >More info Col Original data GEO bulk
82 A. halleri 0.53 >More info 0.36 >More info A. thaliana mature leaves before flowering Original data GEO bulk
83 Col0-PsmES4326-24hpi 0.28 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
84 short 12-degree- 0.31 >More info 0.56 >More info control short Original data GEO bulk
85 46T-Dry -0.29 >More info -0.58 >More info WT-Dry dehydration treatment 1h Original data
86 Col 1d 0.54 >More info 0.32 >More info Col CA Leaves Original data
87 A. thaliana-A. halleri hybrid 0.50 >More info 0.36 >More info A. thaliana mature leaves before flowering Original data GEO bulk
88 OE WRKY40.4 0.26 >More info 0.60 >More info OE WRKY40.4 none leaf Original data GEO bulk
89 DC3000 7h 0.53 >More info 0.32 >More info Mock 7h DC3000 Original data GEO bulk
90 HopZ1a treated ulp1c ulp1d 0.51 >More info 0.34 >More info col Original data GEO bulk
91 46T-CK -0.29 >More info -0.56 >More info WT-CK none Original data
92 camta3-2 -0.26 >More info -0.59 >More info WT Original data GEO bulk
93 3x(m) -0.08 >More info -0.77 >More info 2x two week old seedlings Original data
94 plant (Col-0) 4h OPDA 0.54 >More info 0.30 >More info plant (Col-0) 4h control Original data GEO bulk
95 OPDA 4 h 0.54 >More info 0.30 >More info Col-0 Original data GEO bulk
96 BLM+INA -0.32 >More info -0.52 >More info CK BLM and INA seedling Original data
97 npr1 sni1 brca2a 0.54 >More info 0.29 >More info npr1 sni1 water water seedling Original data GEO bulk
98 Mutant sav3-2 (WL) -0.20 >More info -0.63 >More info Col-0 (WL) Original data GEO bulk
99 35S::RSL4 0.30 >More info 0.53 >More info Col-0 Control root Original data GEO bulk
100 sav3-2 light -0.20 >More info -0.63 >More info Col-0 light seedlings Original data GEO bulk
101 JA 24h 0.32 >More info 0.50 >More info EtOH 24h 24hr Original data GEO bulk
102 max4 hypocotyl -0.31 >More info -0.51 >More info wt hypocotyl hypocotyl Original data GEO bulk
103 sni1 -0.29 >More info -0.53 >More info WT Original data GEO bulk
104 AAF-OX -0.25 >More info -0.57 >More info Col-0 Rosette leaf Original data GEO bulk
105 Mutant siz1-3 (Drought) -0.31 >More info -0.50 >More info Col-0 (Drought) Original data GEO bulk
106 siz1-3 drought -0.31 >More info -0.50 >More info Col-0 drought Original data GEO bulk
107 seedling 6h after HZE WT -0.27 >More info -0.54 >More info seedling day 1 unirradiated WT 6h Original data
108 coi1-2 JA -0.23 >More info -0.58 >More info JA Whole seedling Original data GEO bulk
109 UV Stress 24 h (shoot) -0.30 >More info -0.50 >More info Stress mock 24 h (shoot) Original data Stress treatments
110 Light 3day ivd -0.30 >More info -0.50 >More info 0h ivd Original data
111 T6 leaf-drought 0.29 >More info 0.51 >More info T6 leaf-well watered Original data GEO bulk
112 Col(gl) leaf 0mM NaCl -0.27 >More info -0.53 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
113 Col(gl) 0mM NaCl -0.27 >More info -0.53 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
114 myb61 cork -0.25 >More info -0.55 >More info wt cork cork Original data GEO bulk
115 WT drought -0.30 >More info -0.50 >More info WT control All aerial tissue Original data GEO bulk
116 E.orontii Infection 3 day -0.11 >More info -0.69 >More info Uninfection 3 day Original data Elicitor treatments
117 Col-0 flu HL 3h 0.52 >More info 0.27 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
118 Van 0.55 >More info 0.24 >More info Col-0 Original data GEO bulk
119 hsfa1 quadruple mutant heat shock 0.61 >More info 0.18 >More info WT (Col-0) heat shock whole seedling Original data GEO bulk
120 WT 3H Cold -0.13 >More info -0.66 >More info WT control Original data GEO bulk
121 cpr5 -0.29 >More info -0.50 >More info WT seedling Original data GEO bulk
122 ppi2 0.61 >More info 0.17 >More info WT whole plant Original data GEO bulk
123 Laer Flg22(Agrobacterium) 2h -0.10 >More info -0.68 >More info Laer Control leaf discs Original data GEO bulk
124 Heat shock optimum 0.13 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
125 tbf1-mock infiltration 0.26 >More info 0.52 >More info WT-mock infiltration water for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
126 Col leaf scrape 5 dpi 0.54 >More info 0.23 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
127 Mutant ga1-5 0.27 >More info 0.50 >More info Ler-1 Original data Comparison of plant hormone related mutant
128 eds16 whole leaf 5dpi 0.27 >More info 0.50 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
129 whole roots -Fe 6 hour -0.17 >More info -0.59 >More info whole roots standard Original data GEO bulk
130 DC3000 24h 0.26 >More info 0.50 >More info Mock 24h DC3000 Original data GEO bulk
131 sid2-1 cold 0.20 >More info 0.55 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
132 plant (tga2-5-6) 4h OPDA 0.51 >More info 0.23 >More info plant (tga2-5-6) 4h control Original data GEO bulk
133 C2 leaf-drought 0.24 >More info 0.50 >More info C2 leaf-well watered Original data GEO bulk
134 IAA7mII over-expressor IAA Treated 0.05 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
135 Col ozone 3h -0.12 >More info -0.61 >More info Col clean-air 3h ozone Original data GEO bulk
136 4C 1h -0.16 >More info -0.57 >More info 4C 0h Original data GEO bulk
137 xyl-grown cell culture- 1h 1mM Glc 0.18 >More info 0.55 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
138 S15-118 -0.21 >More info -0.51 >More info wt Original data GEO bulk
139 Col-0 RNAi-MBS2/mbs1-1 HL 3h 0.14 >More info 0.58 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
140 dorn1-1 Root 100 mM ATP 30 min 0.22 >More info 0.50 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
141 FLIGHT TAGESB plate6 ROOTS -0.11 >More info -0.61 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
142 S58-2 -0.20 >More info -0.51 >More info wt Original data GEO bulk
143 seedling 12h after HZE WT -0.20 >More info -0.51 >More info seedling day 1 unirradiated WT 12h Original data
144 seed germinating in countinuous light 24h SL 0.03 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
145 npr1 -0.64 >More info -0.06 >More info WT(COL) Original data GEO bulk
146 Night Time Treatment 0.19 >More info 0.51 >More info Night Time Control 1hr white light pulse aerial rosette Original data
147 oas-a1.1 Cd 18h -0.11 >More info -0.58 >More info Cd 18h root Root Original data GEO bulk
148 chito-tetramer -0.19 >More info -0.50 >More info Col Mock Original data GEO bulk
149 16h Col-0 -0.18 >More info -0.50 >More info 00h Col-0 Original data GEO bulk
150 GA -0.10 >More info -0.57 >More info none GA Rosette Original data GEO bulk
151 phyB mutant 22C 10hrs 0.13 >More info 0.53 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
152 WT Na2S 0.11 >More info 0.55 >More info WT water Na2S leaf Original data GEO bulk
153 OsRLCK253 expressing 0.08 >More info 0.58 >More info WT seedlings Original data GEO bulk
154 60m light 0.13 >More info 0.52 >More info before light whole seedlings Original data GEO bulk
155 toc1-1-77hr -0.12 >More info -0.53 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
156 WT+chitooctaose -0.09 >More info -0.56 >More info WT+water chitooctaose seedlings Original data GEO bulk
157 opr3 OPDA 0.5 h -0.04 >More info -0.61 >More info opr3 0 h Original data GEO bulk
158 Elevated CO2 AMPLE N NIGHT -0.09 >More info -0.54 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
159 CCA1-ox 6am non-polysomal 0.11 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
160 control leaf (cmt 5d) 0.07 >More info 0.54 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
161 abi1 hypocotyl -0.04 >More info -0.56 >More info Ler hypocotyl hypocotyl Original data GEO bulk
162 CDB1-Knockout -0.07 >More info 0.66 >More info WT Original data GEO bulk
163 CMV-WT -0.09 >More info -0.50 >More info Mock-At Aerial tissues Original data GEO bulk
164 bak1-3 +Pep2 2h 0.01 >More info -0.60 >More info WT +Pep2 2h Pep2 Original data GEO bulk
165 3x(p) -0.09 >More info -0.50 >More info 2x two week old seedlings Original data
166 dde2-2 24hpi A. brassicicola 0.06 >More info 0.52 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
167 triploid female excess 0.04 >More info 0.52 >More info tetraploid Original data GEO bulk
168 WT 3h -P 0.11 >More info -0.66 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
169 aba2 1% sucrose 12-day-old 0.06 >More info -0.60 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
170 bri1-116 -0.19 >More info 0.73 >More info Col seedling Original data GEO bulk
171 Red Light 4 h 0.04 >More info -0.58 >More info White Light 4 h Original data Light treatments
172 eds16 whole leaf 1dpi 0.00 >More info 0.53 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
173 Laer pretreat GA Flg22 1h -0.18 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
174 siliques AtHb1 control 0.00 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
175 rosette Dark Wounded 0.52 >More info -0.01 >More info rosette Dark Control Original data GEO bulk
176 Shoot apex inflorescence (after bolting) -0.14 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
177 Protoplast Induced -0.01 >More info -0.50 >More info Uninduced Original data GEO bulk
178 camta1-2 0.03 >More info -0.53 >More info Col-0-WT Original data GEO bulk
179 Mutant lwd1_lwd2 0.07 >More info -0.56 >More info Wildtype for phy mutants Original data GEO bulk
180 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.07 >More info -0.56 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
181 flu dark 8hours/30 minute light 0.15 >More info -0.64 >More info col dark 8hours/30 minute light Original data GEO bulk
182 xyl-grown cell culture- 1h 1mM Suc -0.01 >More info 0.50 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
183 TNT-seedlings 0.04 >More info -0.52 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
184 abi4 vtc2 (I) 0.10 >More info -0.54 >More info Col (I) rosette Original data GEO bulk
185 Elevated CO2 AMPLE N DAY 0.07 >More info -0.51 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
186 Shoot -K 0.52 >More info -0.10 >More info Control-shoot Original data GEO bulk
187 K starvation (shoot) 0.52 >More info -0.10 >More info Ws (shoot) Original data GEO bulk
188 rosette Light Wounded 0.53 >More info -0.13 >More info rosette Light Control Original data GEO bulk
189 ani1 T0.5 -0.11 >More info 0.50 >More info WT T0.5 root tissue Original data GEO bulk
190 P.syringae vir 4 h (leaf) 0.18 >More info -0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
191 Col BTH -0.37 >More info 0.67 >More info Col rosettes Original data GEO bulk
192 bHLH122 ox -0.26 >More info 0.53 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk