4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on bHLH122 ox
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List of experiments correlated with "bHLH122 ox"  Help Download transcriptome of top 30
Score Experiment Correlation from
bHLH122 ox		 Correlation to
bHLH122 ox		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 bHLH122 ox 1.00 >More info 1.00 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
2 agb1 gpa1 -ABA LF -0.76 >More info -0.79 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
3 gpa1 -ABA LF -0.75 >More info -0.74 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
4 npr1 sni1 brca2a SA 0.75 >More info 0.73 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
5 SAM SE agl15 agl18 double mutant -0.73 >More info -0.73 >More info SAM SE Col Original data GEO bulk
6 agb1 -ABA LF -0.73 >More info -0.72 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
7 arp6-10 12 ºC 0.71 >More info 0.73 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
8 OsSAP11 expressing 0.71 >More info 0.71 >More info WT seedlings Original data GEO bulk
9 dark +H2O2 0.71 >More info 0.70 >More info dark 5 mM H2O2 seedling Original data GEO bulk
10 1 h Light Total RNA 0.70 >More info 0.70 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
11 Shoot -K -0.74 >More info -0.66 >More info Control-shoot Original data GEO bulk
12 K starvation (shoot) -0.74 >More info -0.66 >More info Ws (shoot) Original data GEO bulk
13 npr1 sni1 SA -0.68 >More info -0.71 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
14 Leafminer locally damaged thaliana seedlings -0.76 >More info -0.62 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
15 des1.1 -0.73 >More info -0.65 >More info Leaves-WT leaf Original data GEO bulk
16 atmyc2 Seedling BL 0.63 >More info 0.74 >More info WT Seedling BL Original data GEO bulk
17 cs26 long day -0.78 >More info -0.59 >More info Leaves-WT-LD leaf Original data GEO bulk
18 ein2-1 9 hpi A. brassicicola -0.76 >More info -0.60 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
19 flu over-tAPX -0.74 >More info -0.62 >More info WT Col Original data GEO bulk
20 mbd11 mutant thaliana 10-day-old seedling -0.70 >More info -0.65 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
21 4C 2h(SOIL) -0.56 >More info -0.79 >More info 4C 0h(SOIL) Original data GEO bulk
22 ago4-1 -0.73 >More info -0.62 >More info WT La-er whole plants Original data GEO bulk
23 Col-0 9 hpi A. brassicicola -0.70 >More info -0.65 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
24 gh3.5D uninoculated 0.71 >More info 0.64 >More info Col-0 48 hpi Original data GEO bulk
25 rosette Light Wounded -0.68 >More info -0.66 >More info rosette Light Control Original data GEO bulk
26 Col-0 +ABA LF -0.69 >More info -0.65 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
27 rosette leaves fdh -0.72 >More info -0.62 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
28 cs26 short-day 0.73 >More info 0.61 >More info Leaves-WT-SD leaf Original data GEO bulk
29 vtc2 mature somatic embryo -0.69 >More info -0.65 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
30 camta3-2 -0.63 >More info -0.70 >More info WT Original data GEO bulk
31 Elevated CO2 AMPLE N DAY -0.64 >More info -0.69 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
32 sfr6 drought 0.65 >More info 0.67 >More info WT drought All aerial tissue Original data GEO bulk
33 Atss3 Light4 0.69 >More info 0.63 >More info Atss3 Dark0.5 Original data GEO bulk
34 WT+chitooctaose -0.71 >More info -0.61 >More info WT+water chitooctaose seedlings Original data GEO bulk
35 Nicotinamide-77hr -0.73 >More info -0.58 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
36 flu dark 8hours/30 minute light -0.55 >More info -0.76 >More info col dark 8hours/30 minute light Original data GEO bulk
37 Leaf wounded -0.56 >More info -0.74 >More info Leaf control vegetative leaf Original data GEO bulk
38 abi1 hypocotyl -0.60 >More info -0.70 >More info Ler hypocotyl hypocotyl Original data GEO bulk
39 WT 3H Cold -0.55 >More info -0.74 >More info WT control Original data GEO bulk
40 pmr5 pmr6 -0.70 >More info -0.59 >More info Col-0 Original data GEO bulk
41 petiole in D -0.67 >More info -0.62 >More info petiole in WL petioles Original data GEO bulk
42 Col-Luc WT 3h antimycin A -0.75 >More info -0.54 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
43 CMV-WT -0.70 >More info -0.58 >More info Mock-At Aerial tissues Original data GEO bulk
44 Col-0 2HS -0.65 >More info -0.62 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
45 flu -0.69 >More info -0.58 >More info WT Col Original data GEO bulk
46 ataf1-1 mutant Col-0 Bgh inoculated -0.71 >More info -0.56 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
47 rosette Dark Wounded -0.62 >More info -0.64 >More info rosette Dark Control Original data GEO bulk
48 rrd2 IBA -0.61 >More info -0.65 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
49 WT drought -0.63 >More info -0.62 >More info WT control All aerial tissue Original data GEO bulk
50 35S:RPS4 eds1-2 2h 0.61 >More info 0.64 >More info 35S:RPS4 2h leaves Original data
51 seedlings protease IV -0.68 >More info -0.57 >More info seedlings nontreated control whole seedling Original data
52 GA -0.60 >More info -0.65 >More info none GA Rosette Original data GEO bulk
53 myb3 myb3r4d -0.69 >More info -0.56 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
54 leaf blade in D -0.65 >More info -0.60 >More info leaf blade in WL leaf blades Original data GEO bulk
55 myb61 xylem -0.62 >More info -0.62 >More info wt xylem xylem Original data GEO bulk
56 Cor hrpS 10h -0.75 >More info -0.49 >More info Mock 10h Cor hrpS Original data GEO bulk
57 pmr5 -0.63 >More info -0.60 >More info Col-0 Original data GEO bulk
58 12m.KCl -0.68 >More info -0.55 >More info To. KCl 14 day old Roots Original data GEO bulk
59 TA induced -0.62 >More info -0.60 >More info Methanol TA Suspension cells Original data GEO bulk
60 Nicotinamide-69hr -0.72 >More info -0.50 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
61 ex1 flu dark 8hours/30 minute light -0.46 >More info -0.76 >More info col dark 8hours/30 minute light Original data GEO bulk
62 Col-0 RNAi-MBS2/mbs1-1 HL 3h 0.58 >More info 0.63 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
63 35:SUB1C -0.67 >More info -0.54 >More info WT whole seedling Original data GEO bulk
64 rcf1-1 cold 24h -0.61 >More info -0.60 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
65 WT+H2O2 -0.70 >More info -0.51 >More info WT H2O2 Original data GEO bulk
66 aba1 hypocotyl -0.64 >More info -0.57 >More info Ler hypocotyl hypocotyl Original data GEO bulk
67 petiole in FRD -0.66 >More info -0.55 >More info petiole in WL petioles Original data GEO bulk
68 TNT-seedlings -0.56 >More info -0.64 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
69 chito-octamer -0.69 >More info -0.51 >More info Col Mock Original data GEO bulk
70 Col(gl) 0mM NaCl -0.57 >More info -0.63 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
71 bak1-3 +Pep2 2h -0.61 >More info -0.59 >More info WT +Pep2 2h Pep2 Original data GEO bulk
72 abi4-102 (II) -0.71 >More info -0.49 >More info Col (II) rosette Original data GEO bulk
73 Col(gl) leaf 0mM NaCl -0.57 >More info -0.63 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
74 ex2 flu dark 8hours/30 minute light -0.58 >More info -0.62 >More info col dark 8hours/30 minute light Original data GEO bulk
75 edr1 36 h powdery mildew -0.62 >More info -0.58 >More info Col-0 36 h powdery mildew Original data GEO bulk
76 CLO 4mM -0.65 >More info -0.54 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
77 shoot-10 μM DEX- 24hr -0.57 >More info -0.62 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
78 A. thaliana-A. lyrata hybrid 0.57 >More info 0.62 >More info A. thaliana mature leaves before flowering Original data GEO bulk
79 D2O -0.60 >More info -0.59 >More info H2O seedling Original data GEO bulk
80 col-5 hrpA 12h -0.58 >More info -0.61 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
81 M6PR transgenic 0mM NaCl -0.67 >More info -0.51 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
82 Selenate (root) -0.59 >More info -0.59 >More info Ws (root) Original data GEO bulk
83 Nicotinamide-53hr -0.74 >More info -0.44 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
84 Root Selenate -0.59 >More info -0.59 >More info Root control 40 micromolar selenate Root Original data GEO bulk
85 cpr5scv1 -0.55 >More info -0.62 >More info WT(COL) Original data GEO bulk
86 dde2-2 9 hpi A. brassicicola -0.68 >More info -0.49 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
87 mbd6 mutant thaliana 10-day-old seedling -0.62 >More info -0.55 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
88 low CO2 + light -0.62 >More info -0.55 >More info normal CO2 + light Original data GEO bulk
89 anac017-2 AntimycinA 3h 0.67 >More info 0.50 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
90 UV Stress 24 h (shoot) -0.52 >More info -0.65 >More info Stress mock 24 h (shoot) Original data Stress treatments
91 ORS1 induced -0.63 >More info -0.53 >More info mock-induced rosette leaves Original data GEO bulk
92 Col ozone 3h -0.63 >More info -0.53 >More info Col clean-air 3h ozone Original data GEO bulk
93 S15-118 -0.53 >More info -0.63 >More info wt Original data GEO bulk
94 WT AntimycinA 3h -0.68 >More info -0.48 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
95 leaf blade in FRD -0.62 >More info -0.54 >More info leaf blade in WL leaf blades Original data GEO bulk
96 CMV-A2b mutant -0.73 >More info -0.43 >More info Mock-At Aerial tissues Original data GEO bulk
97 stn7-1 0.70 >More info 0.45 >More info Col-0 rosette leaves Original data GEO bulk
98 P.p 10.5hai -0.70 >More info -0.45 >More info At-Control roots Original data GEO bulk
99 oas-a1.1 Cd 24h -0.58 >More info -0.57 >More info Cd 24h root Shoot Original data GEO bulk
100 SOS1 0mM NaCl -0.72 >More info -0.43 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
101 Cycloheximide 3 h -0.69 >More info -0.46 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
102 cpr5npr1svi1 -0.51 >More info -0.64 >More info WT(COL) Original data GEO bulk
103 FLIGHT TAGESB plate6 ROOTS -0.53 >More info -0.62 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
104 WT Shoot-Pi -0.68 >More info -0.47 >More info WT Shoot+Pi shoots Original data GEO bulk
105 roottip hypoxia pSHR 0.58 >More info 0.57 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
106 P35S:rGRF3 -0.73 >More info -0.42 >More info WS Original data GEO bulk
107 WT Col-0 Bgh inoculated -0.64 >More info -0.51 >More info WT Col-0 Un-inoculated Original data GEO bulk
108 HopZ1a treated -0.62 >More info -0.53 >More info col Original data GEO bulk
109 WT 2-4h Xanthomonas -0.64 >More info -0.50 >More info WT T0 Original data GEO bulk
110 OsRLCK253 expressing 0.52 >More info 0.62 >More info WT seedlings Original data GEO bulk
111 shoot control p35S -0.60 >More info -0.54 >More info shoot control total Original data GEO bulk
112 sid2-1 cold 0.58 >More info 0.56 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
113 1h +Pi 0.63 >More info 0.51 >More info 1h -Pi root Original data GEO bulk
114 low CO2 + dark -0.60 >More info -0.54 >More info normal CO2 + light Original data GEO bulk
115 edr1 18 h powdery mildew -0.59 >More info -0.55 >More info Col-0 18 h powdery mildew Original data GEO bulk
116 WT no Pi -0.70 >More info -0.44 >More info WT complete seedlings Original data
117 wavy -0.59 >More info -0.54 >More info WT Original data GEO bulk
118 Ws 100mM NaCl -0.53 >More info -0.60 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
119 Ws leaf 100mM NaCl -0.53 >More info -0.60 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
120 Col-0 48 hpi -0.52 >More info -0.61 >More info Col-0 uninoculated Original data GEO bulk
121 Col whole leaf 7dpi -0.58 >More info -0.55 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
122 seedlings-week-old RECA1-overexpressing
transgenic		 -0.60 >More info -0.53 >More info seedlings-week-old Col-0 seedlings Original data
123 Cor 10h -0.63 >More info -0.50 >More info Mock 10h Cor Original data GEO bulk
124 GiantCell Root 0.63 >More info 0.50 >More info Control Root laser captured giant cells Original data GEO bulk
125 tunicamycin 0.73 >More info 0.39 >More info DMF Original data GEO bulk
126 ceh1 mutant -0.51 >More info -0.61 >More info Parent line Original data
127 AtLysM RLK1 mutant chitooctaose 0.66 >More info 0.46 >More info WT chitooctaose Original data GEO bulk
128 Cd 24h root 0.60 >More info 0.52 >More info WT-Untreated Shoot Original data GEO bulk
129 oas-a1.1 shoot 0.59 >More info 0.53 >More info WT-Untreated Shoot Original data GEO bulk
130 M6PR transgenic leaf 0mM NaCl -0.50 >More info -0.62 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
131 Ler 10C long-day -0.55 >More info -0.56 >More info Ler 20C long-day seeds Original data GEO bulk
132 Col-0 under 4 days salt -0.67 >More info -0.44 >More info Col-0 under control 4 days salt treatment rosette Original data
133 tbf1-SA -0.58 >More info -0.53 >More info WT-SA 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
134 Fenclorim 24hr -0.72 >More info -0.39 >More info Acetone 24hr root Original data GEO bulk
135 IXB induced -0.59 >More info -0.52 >More info Methanol IXB Suspension cells Original data GEO bulk
136 SCR-GR Time 1H Dex -0.50 >More info -0.61 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
137 root longitudinal zone-1 low sulfur 0.61 >More info 0.50 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
138 col-5 DC3000 12h -0.52 >More info -0.59 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
139 GST 4 h (leaf) -0.57 >More info -0.54 >More info Mock 4 h (leaf) Original data Elicitor treatments
140 4C 1h -0.49 >More info -0.62 >More info 4C 0h Original data GEO bulk
141 35S::MBF1c -0.62 >More info -0.48 >More info control Original data GEO bulk
142 ein5-1 ski2-3 -0.60 >More info -0.50 >More info Col-0 aerial tissue Original data
143 vtc2 (I) -0.56 >More info -0.54 >More info Col (I) rosette Original data GEO bulk
144 downy mildew cotyledons late stage -0.70 >More info -0.40 >More info mock inoculated Cotyledons Original data GEO bulk
145 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight -0.57 >More info -0.53 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
146 WT 6H Cold -0.64 >More info -0.46 >More info WT control Original data GEO bulk
147 cpr5npr1 -0.49 >More info -0.61 >More info WT(COL) Original data GEO bulk
148 INA -0.45 >More info -0.65 >More info CK INA seedling Original data
149 35:SUB1A -0.68 >More info -0.41 >More info WT whole seedling Original data GEO bulk
150 +1.6 mM Tween 20 1 h. -0.64 >More info -0.45 >More info +distilled water 1 h. Original data GEO bulk
151 Protoplast Induced -0.46 >More info -0.63 >More info Uninduced Original data GEO bulk
152 HopZ1a treated ulp1c ulp1d -0.59 >More info -0.50 >More info col Original data GEO bulk
153 Flagellin 4 h (leaf) -0.61 >More info -0.48 >More info Mock 4 h (leaf) Original data Elicitor treatments
154 IRP1-OE-Ctrl--root -0.62 >More info -0.47 >More info COL-0-Ctrl--root root Original data
155 Elevated CO2 AMPLE N NIGHT -0.57 >More info -0.51 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
156 3x(p) -0.59 >More info -0.49 >More info 2x two week old seedlings Original data
157 OE-HRA1 NS  -0.67 >More info -0.41 >More info Col-0NS 2 h non-stress (2NS) 7-day-old seedlings Original data
158 aba2 1% sucrose 12-day-old -0.60 >More info -0.48 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
159 IMI 4mM -0.68 >More info -0.40 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
160 DC3000 7h -0.51 >More info -0.56 >More info Mock 7h DC3000 Original data GEO bulk
161 Col-0-3h IAA -0.73 >More info -0.34 >More info Col-0-0h IAA whole plant Original data GEO bulk
162 anti-sense for AtAOX1a -0.56 >More info -0.51 >More info WT Original data GEO bulk
163 ERF96OE -0.56 >More info -0.51 >More info WT leaf Original data
164 atmyc2 Seedling Dark -0.54 >More info -0.53 >More info WT Seedling Dark Original data GEO bulk
165 AgNO3 3 h -0.65 >More info -0.42 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
166 ulp1c ulp1d -0.64 >More info -0.43 >More info col Original data GEO bulk
167 myb61 cork -0.54 >More info -0.53 >More info wt cork cork Original data GEO bulk
168 roottip hypoxia pSCR 0.58 >More info 0.49 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
169 shoot hypoxia p35S -0.58 >More info -0.49 >More info shoot hypoxia total Original data GEO bulk
170 WT 3h -P -0.58 >More info -0.49 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
171 Col-0 C2H4 24h -0.57 >More info -0.50 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
172 Mutant iaa17-6 (IAA) -0.59 >More info -0.48 >More info Col (IAA) Original data GEO bulk
173 Nicotinamide-73hr -0.72 >More info -0.35 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
174 leaf chr11-1chr17-1 -0.60 >More info -0.47 >More info leaf Col-0 leaves Original data GEO bulk
175 aerial organ callus inducing medium 24h -0.49 >More info -0.58 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
176 Nicotinamide-85hr -0.72 >More info -0.34 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
177 arp6-10 2h 27 -degree-C 0.56 >More info 0.50 >More info Col-0 2h at 27 ºC whole seedlings Original data GEO bulk
178 Light -0.58 >More info -0.48 >More info Control Original data GEO bulk
179 atmyc2 Seedling BL+ABA 0.53 >More info 0.53 >More info WT Seedling BL+ABA Original data GEO bulk
180 seedling 12h after HZE WT -0.57 >More info -0.49 >More info seedling day 1 unirradiated WT 12h Original data
181 sfr3 cold -0.60 >More info -0.46 >More info WT-cold aerial tissues Original data GEO bulk
182 2 hr Hypoxia Total RNA -0.65 >More info -0.41 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
183 pepr1-1 Pepr2-3 +Pep2 2h 0.60 >More info 0.46 >More info WT +Pep2 2h Pep2 Original data GEO bulk
184 Shoot apex inflorescence (after bolting) 0.41 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
185 CDB1-Knockout 0.47 >More info 0.59 >More info WT Original data GEO bulk
186 Drought Stress 24 h (shoot) -0.51 >More info -0.54 >More info Stress mock 24 h (shoot) Original data Stress treatments
187 Te ozone -0.68 >More info -0.37 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
188 LTN008-2 aza-dc -0.68 >More info -0.37 >More info LTN012-2 Mock Original data
189 WT chitooctaose -0.61 >More info -0.44 >More info WT water Original data GEO bulk
190 Col-0-avrB-6h -0.55 >More info -0.50 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
191 Col leaf 100mM NaCl -0.49 >More info -0.56 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
192 Col leaf 100mM NaCl -0.49 >More info -0.56 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
193 Col 100mM NaCl -0.49 >More info -0.56 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
194 Wounding Stress3 h (shoot) -0.58 >More info -0.47 >More info Stress mock 3 h (shoot) Original data Stress treatments
195 1 h Light IP RNA 0.50 >More info 0.54 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
196 P.p 6hai -0.70 >More info -0.34 >More info At-Control roots Original data GEO bulk
197 Roots Cd 0.66 >More info 0.38 >More info Roots control Cd Root Original data GEO bulk
198 phr1 Root-Pi -0.75 >More info -0.29 >More info WT Root+Pi roots Original data GEO bulk
199 BLM+INA -0.61 >More info -0.43 >More info CK BLM and INA seedling Original data
200 35S:RPS4 eds1-2 8h 0.59 >More info 0.45 >More info 35S:RPS4 8h leaves Original data
201 root - 08% oxygen - 2h -0.46 >More info -0.58 >More info root - 21% oxygen - 2h Original data GEO bulk
202 WT-Dry -0.45 >More info -0.59 >More info WT-CK dehydration treatment 1h Original data
203 seedling 6h after HZE WT -0.54 >More info -0.49 >More info seedling day 1 unirradiated WT 6h Original data
204 GST NPP1 4 h (leaf) -0.56 >More info -0.47 >More info Mock 4 h (leaf) Original data Elicitor treatments
205 oas-a1.1 Cd 18h -0.54 >More info -0.49 >More info Cd 18h root Root Original data GEO bulk
206 P.p 2.5hai -0.66 >More info -0.37 >More info At-Control roots Original data GEO bulk
207 Red Light 4 h -0.52 >More info -0.51 >More info White Light 4 h Original data Light treatments
208 Col-0 (t-zeatin 3 h) 0.56 >More info 0.47 >More info Col-0 Original data Cytokinin treatment of seedlings
209 rosette leaves lcr -0.49 >More info -0.54 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
210 Laer Flg22 1h -0.65 >More info -0.37 >More info Laer Control leaf discs Original data GEO bulk
211 oligomycin 4 h -0.66 >More info -0.36 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
212 max4 hypocotyl -0.54 >More info -0.48 >More info wt hypocotyl hypocotyl Original data GEO bulk
213 Apex mir-3TCP 14DAS 0.61 >More info 0.41 >More info Apex Col 14DAS Original data GEO bulk
214 Leafminer systemically damaged thaliana seedlings -0.57 >More info -0.45 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
215 coi1-16 ein2 sid2 ctrl 0.63 >More info 0.39 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
216 root stele -S 0.53 >More info 0.49 >More info root stele pH5.7 Original data GEO bulk
217 Whole root - low pH 30min -0.51 >More info -0.51 >More info Whole root - Std pH 30min pH 4.6 for 30 min Original data GEO bulk
218 ga1-3 SCL3OE 0.60 >More info 0.42 >More info ga1-3 whole root Original data
219 bZIP1ko mutant N+Light+ -0.57 >More info -0.44 >More info WT-sib N+Light+ whole plant Original data GEO bulk
220 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark -0.53 >More info -0.48 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hMockDark 2 h mock dark seedling Original data
221 IRP1-OE-Fe--shoot -0.62 >More info -0.39 >More info COL-0-Fe--shoot shoot Original data
222 Laer Flg22+GA 1h -0.64 >More info -0.37 >More info Laer Control leaf discs Original data GEO bulk
223 tbf1-mock spray -0.54 >More info -0.47 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
224 abi4 vtc2 (I) -0.50 >More info -0.51 >More info Col (I) rosette Original data GEO bulk
225 tbf1-mock infiltration 0.57 >More info 0.44 >More info WT-mock infiltration water for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
226 camta3-1 -0.44 >More info -0.57 >More info WT Original data GEO bulk
227 mkk1/mkk2 control rep -0.43 >More info -0.58 >More info Col-0 Time 0 rep Original data GEO bulk
228 Atss3 Light1 0.48 >More info 0.53 >More info Atss3 Dark0.5 Original data GEO bulk
229 agb1 +ABA LF 0.36 >More info 0.65 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
230 Chitin -0.65 >More info -0.35 >More info Col C Original data GEO bulk
231 CT101 ozone -0.64 >More info -0.36 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
232 msh1 albino -0.52 >More info -0.48 >More info WT aerial part Original data GEO bulk
233 Col-0-1h IAA -0.74 >More info -0.26 >More info Col-0-0h IAA whole plant Original data GEO bulk
234 Mutant gh3.5-1D 0.68 >More info 0.32 >More info Col-0 Original data GEO bulk
235 35S:RPS4 eds1-2 24h 0.54 >More info 0.46 >More info 35S:RPS4 24h leaves Original data
236 Col-0-30min IAA -0.73 >More info -0.27 >More info Col-0-0h IAA whole plant Original data GEO bulk
237 30m light 0.56 >More info 0.44 >More info before light whole seedlings Original data GEO bulk
238 Chitosan 3h Treatment -0.64 >More info -0.36 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
239 S14-150 -0.39 >More info -0.61 >More info wt Original data GEO bulk
240 coi1-2 -0.53 >More info -0.46 >More info Col-0 mock Whole seedling Original data GEO bulk
241 nNOS-control -0.54 >More info -0.45 >More info WT-control leaf Original data
242 atmospheric CO2 high Mg shoot -0.66 >More info -0.33 >More info atmospheric CO2 normal Mg shoot Shoot Original data
243 WT NAA/flg 1h -0.58 >More info -0.41 >More info WT 0h Leaf tissue Original data GEO bulk
244 Col-0 ozone- (control genotype tga2 tag5 tga6) -0.62 >More info -0.37 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
245 hrcC -0.56 >More info -0.43 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
246 Bur-0-3h IAA -0.56 >More info -0.43 >More info Bur-0h IAA whole plant Original data GEO bulk
247 Col-0 low oxygen -0.50 >More info -0.49 >More info Col-0 Original data GEO bulk
248 WT resupplied Pi 4h -0.66 >More info -0.33 >More info WT complete seedlings Original data
249 WT light 0.50 >More info 0.49 >More info WT dark Original data GEO bulk
250 21h-DC3000 hrpA 0.56 >More info 0.43 >More info 21h-DC3000 leaves Original data GEO bulk
251 MPK6 ox Shoot Hypoxia -0.55 >More info -0.44 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
252 9 hr Hypoxia 1 hr recovery IP RNA -0.63 >More info -0.36 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
253 nNOS-drought -0.52 >More info -0.47 >More info WT-drought leaf Original data
254 roottip control pSCR 0.47 >More info 0.52 >More info roottip control total control roottip Original data GEO bulk
255 Col in Pi deficiency medium -0.47 >More info -0.52 >More info Col in control medium root Original data GEO bulk
256 total mRNA eif3k -0.46 >More info -0.53 >More info total mRNA WT aerial part Original data GEO bulk
257 aerial organ callus inducing medium 12 h -0.35 >More info -0.64 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
258 WT NAA/flg 2h -0.54 >More info -0.44 >More info WT 0h Leaf tissue Original data GEO bulk
259 whole roots 140 mM NaCl 30 minutes -0.55 >More info -0.43 >More info whole roots standard Original data GEO bulk
260 SCR-GR Time 12H Dex -0.54 >More info -0.44 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
261 ataf1-1 mutant Col-0 Un-inoculated 0.69 >More info 0.29 >More info WT Col-0 Un-inoculated Original data GEO bulk
262 bak1-3 +Pep2 10h -0.57 >More info -0.41 >More info WT +Pep2 10h Pep2 Original data GEO bulk
263 leaf13 -0.52 >More info -0.46 >More info unwounded leaves none Original data GEO bulk
264 WT flg22 2h -0.53 >More info -0.45 >More info WT 0h Leaf tissue Original data GEO bulk
265 8h-DC3000 avrRpm1 -0.57 >More info -0.41 >More info 8h-DC3000 leaves Original data GEO bulk
266 Col whole leaf 5dpi -0.47 >More info -0.51 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
267 gpa1 +ABA LF 0.42 >More info 0.56 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
268 WT cold -0.45 >More info -0.53 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
269 npr1 sni1 ssn2 SA 0.65 >More info 0.32 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
270 S58-2 -0.52 >More info -0.45 >More info wt Original data GEO bulk
271 Pto inoculated -0.52 >More info -0.45 >More info col Original data GEO bulk
272 efr-1 untreated 0.58 >More info 0.39 >More info WT untreated untreated Original data GEO bulk
273 Col-0 ozone -0.62 >More info -0.35 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
274 embryo proper linear-cotyledon 0.54 >More info 0.43 >More info whole seeds linear-cotyledon Original data GEO bulk
275 Atss3 Dark4 0.59 >More info 0.38 >More info Atss3 Dark0.5 Original data GEO bulk
276 bZIP1ko mutant N+Light- -0.55 >More info -0.42 >More info WT-sib N+Light- whole plant Original data GEO bulk
277 pvip1 pvip2 -0.46 >More info -0.51 >More info Col-0 whole rosettes Original data GEO bulk
278 HARAP aerobic 0.45 >More info 0.52 >More info WT aerobic aerobic Original data GEO bulk
279 Rsch 8h -0.47 >More info -0.50 >More info Rsch CA Leaves Original data
280 Laer pretreat GA+JA Flg22 0h -0.59 >More info -0.37 >More info Laer pretreat water control leaf discs Original data GEO bulk
281 axr2 0.60 >More info 0.36 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
282 SHR-GR Time 1H Dex -0.55 >More info -0.41 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
283 AFB1 flg22 2h -0.51 >More info -0.45 >More info WT 0h Leaf tissue Original data GEO bulk
284 Nicotinamide-49hr -0.65 >More info -0.31 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
285 Van SA -0.67 >More info -0.29 >More info Col-0 SA Original data GEO bulk
286 Col-0 shade -0.53 >More info -0.43 >More info Col-0 light seedlings Original data GEO bulk
287 GST-overexpression seedlings control -0.57 >More info -0.39 >More info WT seedlings control Seedlings Original data
288 bri1-116 0.23 >More info 0.73 >More info Col seedling Original data GEO bulk
289 EBE-XVE +estradiol 0.33 >More info 0.63 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
290 seed germinating in countinuous light 24h SL 0.29 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
291 Osmotic Stress 24 h (shoot) -0.51 >More info -0.44 >More info Stress mock 24 h (shoot) Original data Stress treatments
292 Col-0 ozone- (control genotype coi1-16 ein2 sid2) -0.62 >More info -0.33 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
293 cdkf:1-2 -0.57 >More info -0.38 >More info wt seedling young seedlings Original data GEO bulk
294 CMP 4hr -0.64 >More info -0.31 >More info Acetone 4hr root Original data GEO bulk
295 DFPM -0.54 >More info -0.41 >More info control Original data GEO bulk
296 K starvation (root) -0.58 >More info -0.37 >More info Ws (root) Original data GEO bulk
297 Root -K -0.58 >More info -0.37 >More info Control-root Original data GEO bulk
298 P.p 30hai -0.64 >More info -0.31 >More info At-Control roots Original data GEO bulk
299 sid2-2 9 hpi A. brassicicola -0.62 >More info -0.33 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
300 phyB mutant 22C 10hrs 0.50 >More info 0.45 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
301 miR393 0h 0.45 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
302 atr mock -0.68 >More info -0.26 >More info WT mock shoot apical meristem Original data
303 bri1-5 mutant 0.40 >More info 0.54 >More info WT 7 day-old whole seedlings Original data
304 AvrRpt2 Col-0 6hpi -0.60 >More info -0.34 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
305 Nicotinamide-89hr -0.71 >More info -0.23 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
306 pnp1-1 1wk +P -0.62 >More info -0.32 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
307 9 hr Hypoxia Total RNA -0.64 >More info -0.30 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
308 erf104-ko Flg22 4h -0.52 >More info -0.42 >More info erf104-ko H2O 4h Original data GEO bulk
309 Dark 6h ivd -0.51 >More info -0.43 >More info 0h ivd Original data
310 Seedling-HeatStressed TOTALmRNA -0.58 >More info -0.36 >More info Seedling-control TOTALmRNA seedling Original data
311 Salt Stress 24 h (root) -0.61 >More info -0.33 >More info Stress mock 24 h (root) Original data Stress treatments
312 toc1-1-89hr 0.41 >More info 0.53 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
313 cpr5 -0.44 >More info -0.50 >More info WT(COL) Original data GEO bulk
314 WT seedlings MV -0.55 >More info -0.38 >More info WT seedlings control Seedlings Original data GEO bulk
315 Mutant siz1-3 (Drought) -0.54 >More info -0.39 >More info Col-0 (Drought) Original data GEO bulk
316 Van -0.65 >More info -0.28 >More info Col-0 Original data GEO bulk
317 siz1-3 drought -0.54 >More info -0.39 >More info Col-0 drought Original data GEO bulk
318 3x(m) -0.37 >More info -0.56 >More info 2x two week old seedlings Original data
319 ebs Pool -0.61 >More info -0.32 >More info Ler Pool seedling Original data GEO bulk
320 Botrytis cinerea 48h -0.59 >More info -0.34 >More info control 48h Original data GEO bulk
321 Fenclorim 4hr -0.64 >More info -0.29 >More info Acetone 4hr root Original data GEO bulk
322 Bur-0-1h IAA -0.58 >More info -0.35 >More info Bur-0h IAA whole plant Original data GEO bulk
323 Got7 UV -0.32 >More info -0.61 >More info Got7 mock UV seedling Original data
324 opr3 JA 0.5 h -0.32 >More info -0.61 >More info opr3 0 h Original data GEO bulk
325 npr1-1 SA 0.55 >More info 0.37 >More info Col-0 SA complete seedling Original data
326 6h volatiles Sp. HRO-C48 -0.54 >More info -0.38 >More info 6h untreated whole seedling Original data GEO bulk
327 wrky33 Bc inoculation 14h -0.64 >More info -0.28 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
328 Col-0 37C -0.64 >More info -0.28 >More info Col-0 22C Original data GEO bulk
329 phr1 phl1 Root-Pi -0.56 >More info -0.36 >More info WT Shoot+Pi roots Original data GEO bulk
330 nia1nia2 -0.56 >More info -0.36 >More info Col-0 whole seedlings Original data GEO bulk
331 FLIGHT TAGES 2B plate6 HYPOCOTYLS -0.55 >More info -0.37 >More info GROUND CONTROL TAGES 2B plate6 HYPOCOTYLS plant tissue Original data
332 Mutant lwd1_lwd2 -0.58 >More info -0.34 >More info Wildtype for phy mutants Original data GEO bulk
333 axr1 hypocotyl -0.51 >More info -0.41 >More info wt hypocotyl hypocotyl Original data GEO bulk
334 Col-0 35S:MBS1 HL 3h 0.57 >More info 0.35 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
335 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 -0.58 >More info -0.34 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
336 gh3.5-1D 48 hpi -0.51 >More info -0.41 >More info Col-0 uninoculated Original data GEO bulk
337 root hypoxia total -0.57 >More info -0.35 >More info root control total Original data GEO bulk
338 mkk1/mkk2 24h BTH rep -0.42 >More info -0.50 >More info Col-0 24h BTH rep Original data GEO bulk
339 aba3-1 -0.41 >More info -0.51 >More info wt Original data GEO bulk
340 miR393 flg22 1h -0.51 >More info -0.40 >More info WT 0h Leaf tissue Original data GEO bulk
341 FLIGHT TAGESB plate -0.65 >More info -0.26 >More info GROUND CONTROL TAGESB plate Original data
342 mkk2 24h BTH rep -0.38 >More info -0.53 >More info Col-0 24h BTH rep Original data GEO bulk
343 ice1 control -0.58 >More info -0.33 >More info WT control Original data GEO bulk
344 root protoplasts 40 mM NaCl -0.50 >More info -0.41 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
345 hrpA fliC 7h -0.58 >More info -0.33 >More info Mock 7h hrpA fliC Original data GEO bulk
346 SLWF infested -0.57 >More info -0.34 >More info SLWF uninfested rosette tissue Original data GEO bulk
347 CMP 24hr -0.56 >More info -0.34 >More info Acetone 24hr root Original data GEO bulk
348 WT Bc inoculation 14h -0.63 >More info -0.27 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
349 Atss3 Dark8 0.55 >More info 0.35 >More info Atss3 Dark0.5 Original data GEO bulk
350 WT flg22 1h -0.55 >More info -0.35 >More info WT 0h Leaf tissue Original data GEO bulk
351 WT Shoot Hypoxia -0.50 >More info -0.40 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
352 Nicotinamide-57hr -0.66 >More info -0.24 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
353 amiRAP aerobic 0.38 >More info 0.52 >More info WT aerobic aerobic Original data GEO bulk
354 9 hr Hypoxia 1 hr recovery Total RNA -0.60 >More info -0.30 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
355 tZ 0.58 >More info 0.32 >More info DMSO--WT trans-zeatin roots Original data GEO bulk
356 Bur-0-30min IAA -0.55 >More info -0.34 >More info Bur-0h IAA whole plant Original data GEO bulk
357 Laer Flg22+GA 2h -0.54 >More info -0.35 >More info Laer Control leaf discs Original data GEO bulk
358 Leaf systemic -0.52 >More info -0.37 >More info Leaf control vegetative leaf Original data GEO bulk
359 rao2 H2O2 3h 0.51 >More info 0.38 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
360 AFB1 flg22 1h -0.50 >More info -0.39 >More info WT 0h Leaf tissue Original data GEO bulk
361 vte2 leaves 48h LT -0.54 >More info -0.35 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
362 phyB mutant 16C 10hrs 0.38 >More info 0.51 >More info 16C 10h whole plant excluding roots Original data GEO bulk
363 afb3-1 2h KCl 0.60 >More info 0.29 >More info Ws 2h KCl 2 hours of 5 mM KCl Arabidopsis root Original data GEO bulk
364 mbd4 mutant thaliana 10-day-old seedling -0.54 >More info -0.34 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
365 ft-1 10C long-day 0.54 >More info 0.34 >More info Ler 10C long-day seeds Original data GEO bulk
366 Mutant arf2-6 0.62 >More info 0.26 >More info Col Original data GEO bulk
367 P35S:rGRF1 0.58 >More info 0.30 >More info Col-0 Original data GEO bulk
368 gun1gun5 far-red pretreated 0.54 >More info 0.33 >More info WT far-red pretreated Original data GEO bulk
369 whole roots 140 mM NaCl 1 hour -0.51 >More info -0.36 >More info whole roots standard Original data GEO bulk
370 sav1-1 light -0.51 >More info -0.36 >More info Col-0 light seedlings Original data GEO bulk
371 root Dosed gold -0.59 >More info -0.28 >More info root No gold .125 mM gold 24 h roots Original data
372 Light 3day wt 0.66 >More info 0.21 >More info 0h wt Original data
373 Laer Flg22 2h -0.52 >More info -0.35 >More info Laer Control leaf discs Original data GEO bulk
374 coi1-16 ein2 sid2 ozone -0.60 >More info -0.27 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
375 0.125 mM gold 24 h -0.59 >More info -0.28 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
376 Aerobic e1 ate2 -0.50 >More info -0.37 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
377 gun4-1 -0.52 >More info -0.34 >More info WT Col-0 seedling Original data GEO bulk
378 Ambient CO2 LIMITING N DAY -0.51 >More info -0.35 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
379 hai1-2 -0.54 >More info -0.31 >More info control control whole seedlings Original data GEO bulk
380 mutant acs2B (single mutant) 0.52 >More info 0.33 >More info col control (single mutant) Original data GEO bulk
381 wnk8-2 untreated 0.52 >More info 0.33 >More info Col-0 untreated seedlings Original data GEO bulk
382 Laer pretreat JA Flg22 1h -0.64 >More info -0.21 >More info Laer pretreat water control leaf discs Original data GEO bulk
383 pho1 -0.57 >More info -0.28 >More info Col2WT Original data GEO bulk
384 msg2 0.60 >More info 0.25 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
385 SCR 96hr-S 0.50 >More info 0.35 >More info SCR 0hr endodermis Original data
386 Imbibed 1 h (seed) -0.35 >More info -0.50 >More info Dry seed Original data Time course of early seed germination
387 Elevated CO2 fully expanded leaf -0.53 >More info -0.31 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
388 rsa3-1 Na 24h -0.51 >More info -0.33 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
389 9 hr Hypoxia IP RNA -0.56 >More info -0.28 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
390 root longitudinal zone-3 low sulfur 0.60 >More info 0.24 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
391 irradiated leaf (cmt 5d) -0.57 >More info -0.27 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
392 GiantCell Root 0.63 >More info 0.21 >More info Control Root laser captured giant cells Original data GEO bulk
393 Nicotinamide-81hr -0.70 >More info -0.14 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
394 vte1-1 3d vernalization 0.53 >More info 0.30 >More info WT 3d vernalization Original data GEO bulk
395 Laer pretreat GA+JA Flg22 1h -0.50 >More info -0.33 >More info Laer pretreat water control leaf discs Original data GEO bulk
396 root cells endodermis and quiescent center -Fe -0.55 >More info -0.28 >More info whole roots standard Original data GEO bulk
397 3m.KNO3 -0.50 >More info -0.33 >More info To. KNO3 14 day old Roots Original data GEO bulk
398 atmospheric CO2 low Mg shoot -0.54 >More info -0.29 >More info atmospheric CO2 normal Mg shoot Shoot Original data
399 Lipopolysaccaride4 h (leaf) -0.51 >More info -0.32 >More info Mock 4 h (leaf) Original data Elicitor treatments
400 Col 8h -0.51 >More info -0.32 >More info Col CA Leaves Original data
401 aerial organ callus inducing medium 48 h -0.30 >More info -0.53 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
402 triploid female excess 0.33 >More info 0.50 >More info tetraploid Original data GEO bulk
403 3m.KCl -0.57 >More info -0.26 >More info To. KCl 14 day old Roots Original data GEO bulk
404 seedlings +5AC -0.57 >More info -0.26 >More info control seedlings 10-day old whole seedling Original data GEO bulk
405 IAA/inhibitor A Treated -0.56 >More info -0.26 >More info IAA Treated Original data GEO bulk
406 root callus inducing medium 96 h 0.62 >More info 0.20 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
407 upf3 -0.53 >More info -0.29 >More info WT whole plant Original data GEO bulk
408 AtMinD1 Prolonged-induction -0.26 >More info -0.56 >More info Control whole plant Original data GEO bulk
409 Rose Bengal 0.5 uM -0.28 >More info -0.54 >More info Control RB and PER Rose Bengal Original data
410 gai MeJA 1h 0.64 >More info 0.17 >More info Laer MeJA 1h leaf discs Original data GEO bulk
411 KAN1-GR 60min -0.51 >More info -0.30 >More info KAN1-GR 0min Original data GEO bulk
412 WT 1wk -P -0.61 >More info -0.20 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
413 JMJ24-IBM1 double knockout 0.51 >More info 0.30 >More info WT Original data GEO bulk
414 mutant acs4A (single mutant) 0.51 >More info 0.30 >More info col control (single mutant) Original data GEO bulk
415 21h-DC3000 avrRpm1 0.51 >More info 0.30 >More info 21h-DC3000 leaves Original data GEO bulk
416 Seedling-HeatStressed POLYSOMESmRNA -0.51 >More info -0.30 >More info Seedling-control POLYSOMESmRNA seedling Original data
417 ARR22-ox (t-zeatin 3 h) -0.55 >More info -0.26 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
418 C24 ozone -0.59 >More info -0.22 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
419 gai Control -0.60 >More info -0.21 >More info Laer Control leaf discs Original data GEO bulk
420 Shoot submergence 24h -0.23 >More info -0.58 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
421 P. infestans 6 h (leaf) -0.65 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
422 SAM SE 35S:AGL15 -0.56 >More info -0.24 >More info SAM SE Col Original data GEO bulk
423 F1 whole seedlings root -0.55 >More info -0.25 >More info Col whole seedlings root Seedlings Original data GEO bulk
424 root callus inducing medium 48 h 0.60 >More info 0.20 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
425 KAN1-GR 30min -0.53 >More info -0.27 >More info KAN1-GR 0min Original data GEO bulk
426 WT Root-Pi -0.65 >More info -0.14 >More info WT Root+Pi roots Original data GEO bulk
427 myb50 xylem -0.59 >More info -0.20 >More info wt xylem xylem Original data GEO bulk
428 ckh1 CK200 -0.51 >More info -0.28 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
429 Laer pretreat GA Flg22 0h -0.57 >More info -0.22 >More info Laer pretreat water control leaf discs Original data GEO bulk
430 vtc2-1 0.58 >More info 0.21 >More info Col-0 whole plant Original data GEO bulk
431 rGRF -0.22 >More info -0.57 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
432 A2hsfa1-ox in quadruple mutant 0.58 >More info 0.20 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
433 Bay-0-30min IAA -0.53 >More info -0.25 >More info Bay-0-0h IAA whole plant Original data GEO bulk
434 NJ15 -0.62 >More info -0.16 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
435 vtc2 day 7 induction 0.53 >More info 0.25 >More info WT day 7 induction day 7 induction of somatic embryogenesis Original data GEO bulk
436 atr zebularine -0.62 >More info -0.16 >More info WT zebularine shoot apical meristem Original data
437 treated group -0.26 >More info -0.52 >More info Control group Original data
438 root callus inducing medium 24h 0.57 >More info 0.21 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
439 Shoot P recovery -0.55 >More info -0.22 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
440 SA 4mM -0.64 >More info -0.13 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
441 ABA JA 24h -0.19 >More info -0.58 >More info EtOH 24h 24hr Original data GEO bulk
442 camta1/3 warm -0.27 >More info -0.50 >More info WT warm entire aerial part Original data GEO bulk
443 til1-1 22C -0.55 >More info -0.21 >More info Col-0 22C Original data GEO bulk
444 root callus inducing medium 12 h 0.54 >More info 0.21 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
445 8hr-pH4.5 -0.51 >More info -0.24 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
446 spx1 spx2 no Pi -0.61 >More info -0.14 >More info WT no Pi seedlings Original data
447 toc1-1-77hr -0.53 >More info -0.22 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
448 grf1/grf2/grf3 -0.54 >More info -0.21 >More info WS Original data GEO bulk
449 IAA 0.5 h -0.54 >More info -0.21 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
450 safener treated -0.52 >More info -0.23 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
451 R. solani AG8 -0.51 >More info -0.24 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
452 nia1nia2noa1-2 -0.53 >More info -0.22 >More info Col-0 whole seedlings Original data GEO bulk
453 Col upon hypoxia 6 hrs -0.53 >More info -0.21 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
454 SA -0.50 >More info -0.24 >More info WT mock Whole seedling Original data GEO bulk
455 hsfa2 KO 0.50 >More info 0.24 >More info WT (Col-0) whole seedling Original data GEO bulk
456 FLIGHT TAGESB plate6 SHOOTS -0.56 >More info -0.18 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
457 4x -0.54 >More info -0.19 >More info 2x two week old seedlings Original data
458 5-Triiodobenzoic acid3 h -0.53 >More info -0.20 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
459 mkk1 24h BTH rep -0.18 >More info -0.55 >More info Col-0 24h BTH rep Original data GEO bulk
460 Col-0 V. longisporum-inoculated 48 hpi -0.54 >More info -0.18 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
461 rdr6-15 0.63 >More info 0.09 >More info Col-0 Original data GEO bulk
462 cys-c1 root 0.54 >More info 0.17 >More info Root-WT roots Original data GEO bulk
463 psad1-1 stn7-1 0.55 >More info 0.16 >More info Col-0 rosette leaves Original data GEO bulk
464 Cold Stress 24 h (root) -0.54 >More info -0.17 >More info Stress mock 24 h (root) Original data Stress treatments
465 arf2 brz 0.55 >More info 0.16 >More info arf2 mock Original data GEO bulk
466 Ambient CO2 leaf primordia 0.52 >More info 0.19 >More info Control for tissue data leaf primordia Original data
467 C24 24h cold 0.51 >More info 0.20 >More info Col 24h cold leaf Original data GEO bulk
468 axr2-BR 0.52 >More info 0.19 >More info BR BR dark-grown seedlings Original data GEO bulk
469 WT (Col-0) inflorescence drought day 4 -0.50 >More info -0.21 >More info WT (Col-0) inflorescence well-watered day 4 Unopen flower buds Original data GEO bulk
470 6h +Pi 0.50 >More info 0.21 >More info 6h -Pi root Original data GEO bulk
471 Mutant iaa17-6 -0.20 >More info -0.51 >More info Col Original data GEO bulk
472 Shoot dark control 7h -0.13 >More info -0.58 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
473 1.5 hr ammonium -0.53 >More info -0.17 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
474 spx1 spx2 complete -0.51 >More info -0.19 >More info WT complete seedlings Original data
475 OE-HRA1 2HS  -0.58 >More info -0.11 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
476 calcicole ecotype Cal-0 -0.59 >More info -0.10 >More info Col-4 1 mM CaCl2 Original data GEO bulk
477 expressing C2 Mock 0.51 >More info 0.17 >More info LUC2C Original data GEO bulk
478 Col BTH 0.01 >More info 0.67 >More info Col rosettes Original data GEO bulk
479 del1-1 5dpi -0.54 >More info -0.13 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
480 cat2-hCO2 0.54 >More info 0.13 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
481 ein3 eil1 JA -0.54 >More info -0.13 >More info JA Whole seedling Original data GEO bulk
482 C24 UV1 0.54 >More info 0.13 >More info C24 mock UV seedling Original data
483 agb1 gpa1 +ABA LF 0.14 >More info 0.53 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
484 Nicotinamide-65hr -0.56 >More info -0.10 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
485 elevated CO2 high Mg shoot 0.50 >More info 0.15 >More info atmospheric CO2 high Mg shoot Shoot Original data
486 irradiated leaf (WT 1d) -0.58 >More info -0.07 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
487 HairpinZ 4 h (leaf) -0.61 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
488 hai1-2 low water potential -0.53 >More info -0.11 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
489 CCA1-ox 6am non-polysomal 0.13 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
490 gpa1-4/agb1-2 ozone 2d 0.06 >More info 0.58 >More info Col ozone 2d ozone Original data GEO bulk
491 AsAKiin11 T3 0.54 >More info 0.09 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
492 DUO1 induced 6h 0.51 >More info 0.12 >More info 6hr-not-induced whole plant Original data GEO bulk
493 Col-0 INA 6d -0.12 >More info -0.51 >More info Col-0 MOCK 6d Original data GEO bulk
494 35S::PI ap3-3 35S::AP-GR +DEX -0.06 >More info -0.55 >More info 0hr DEX Original data GEO bulk
495 Shoot dark control 24h -0.03 >More info -0.56 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
496 cngc1-3 -0.09 >More info -0.50 >More info Col-0 root Original data GEO bulk
497 wrky33 mock -0.53 >More info -0.04 >More info WT mock 14 hour mock control leaves Original data
498 IAA 1 h -0.51 >More info -0.05 >More info Mock 1 h Original data Basic hormone treatment of seedlings
499 php -0.50 >More info -0.06 >More info WT Original data GEO bulk
500 2hr continuous KNO3 PrR cell -0.51 >More info -0.03 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
501 WT roots - Fe -0.60 >More info 0.06 >More info WT roots + Fe Roots Original data GEO bulk
502 cat2-2; harvested 8h continiously maintained in
high CO2;		 0.52 >More info 0.02 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
503 CLV3n cells -0.59 >More info 0.05 >More info Protoplast Induced Original data GEO bulk
504 arr10 arr12 0.60 >More info -0.07 >More info DMSO--WT DMSO roots Original data GEO bulk
505 penta MeJA 1h -0.56 >More info 0.03 >More info Laer MeJA 1h leaf discs Original data GEO bulk
506 lug3 leaves -0.54 >More info 0.02 >More info WT-leaves matured rosette leaves Original data GEO bulk
507 E.orontii Infection 3 day 0.11 >More info -0.63 >More info Uninfection 3 day Original data Elicitor treatments
508 siliques AtHb1 control -0.02 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
509 light 0.66 >More info -0.18 >More info dark light seedling Original data GEO bulk
510 seedling 24h after HZE WT -0.55 >More info 0.08 >More info seedling day 2 unirradiated WT 24h Original data
511 46T-CK 0.59 >More info -0.12 >More info WT-CK none Original data
512 msh1 recA3 untreated 0.51 >More info -0.09 >More info WT untreated above-ground parts Original data GEO bulk
513 irradiated leaf (WT 5d) -0.59 >More info 0.17 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
514 IAA7mII over-expressor IAA Treated -0.28 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
515 Nicotinamide-61hr -0.54 >More info 0.14 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
516 M6PR transgenic 100mM NaCl -0.56 >More info 0.17 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
517 WT NAA 1h -0.52 >More info 0.14 >More info WT 0h Leaf tissue Original data GEO bulk
518 ABA SA 24h 0.15 >More info -0.52 >More info EtOH 24h 24hr Original data GEO bulk
519 root - 04% oxygen - 2h 0.14 >More info -0.50 >More info root - 21% oxygen - 2h Original data GEO bulk
520 Mh0 UV 0.53 >More info -0.18 >More info Mh0 mock UV seedling Original data
521 ABA 0.5 h -0.51 >More info 0.17 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
522 Laer pretreat GA Flg22 1h -0.39 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
523 root cells cortex -Fe -0.54 >More info 0.26 >More info whole roots standard Original data GEO bulk
524 0h hml -0.52 >More info 0.25 >More info 0h wt Original data
525 epiF3 0.53 >More info -0.26 >More info WT Col-0 aerial part Original data
526 Atwrky63 0.51 >More info -0.26 >More info Col0 none leaf Original data GEO bulk
527 Heat shock optimum -0.44 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
528 Leafminer damaged seedlings -0.76 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
529 root - 08% oxygen - 30min 0.37 >More info -0.57 >More info root - 21% oxygen - 30min Original data GEO bulk
530 Light 3day hml 0.58 >More info -0.43 >More info 0h hml Original data
531 Col0-PsmES4326-24hpi -0.63 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk