4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on gh3.5-1D 48 hpi
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List of experiments correlated with "gh3.5-1D 48 hpi"  Help Download transcriptome of top 30
Score Experiment Correlation from
gh3.5-1D 48 hpi		 Correlation to
gh3.5-1D 48 hpi		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 gh3.5-1D 48 hpi 1.00 >More info 1.00 >More info Col-0 uninoculated Original data GEO bulk
2 Mutant gh3.5-1D (AvrRpt2) 0.84 >More info 0.92 >More info Col-0 (AvrRpt2) Original data GEO bulk
3 Col-0 48 hpi 0.84 >More info 0.88 >More info Col-0 uninoculated Original data GEO bulk
4 del1-1 mutant 5d uninfected 0.79 >More info 0.88 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
5 Shoot -Cs 0.74 >More info 0.89 >More info Control-shoot Original data GEO bulk
6 IMI 4mM 0.80 >More info 0.83 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
7 cpr5scv1 0.77 >More info 0.85 >More info WT(COL) Original data GEO bulk
8 SLWF infested 0.79 >More info 0.83 >More info SLWF uninfested rosette tissue Original data GEO bulk
9 Botrytis cinerea 48h 0.79 >More info 0.82 >More info control 48h Original data GEO bulk
10 ice1 control 0.76 >More info 0.84 >More info WT control Original data GEO bulk
11 cpr5 0.78 >More info 0.81 >More info WT(COL) Original data GEO bulk
12 35S:RPS4 eds1-2 24h -0.79 >More info -0.80 >More info 35S:RPS4 24h leaves Original data
13 Col ozone 2d 0.78 >More info 0.81 >More info Col clean-air 2d ozone Original data GEO bulk
14 dor drought 0.74 >More info 0.85 >More info WT drought Original data GEO bulk
15 mkk1/mkk2 24h BTH rep 0.79 >More info 0.79 >More info Col-0 24h BTH rep Original data GEO bulk
16 CMV-WT 0.78 >More info 0.79 >More info Mock-At Aerial tissues Original data GEO bulk
17 cpr5npr1 0.77 >More info 0.80 >More info WT(COL) Original data GEO bulk
18 HopZ1a treated ulp1c ulp1d 0.79 >More info 0.78 >More info col Original data GEO bulk
19 pvip1 pvip2 0.79 >More info 0.78 >More info Col-0 whole rosettes Original data GEO bulk
20 HopZ1a treated 0.78 >More info 0.79 >More info col Original data GEO bulk
21 RPL18 TuMV inoculated total RNA 0.75 >More info 0.82 >More info mock inoculated total RNA PO Original data GEO bulk
22 Col-0 under 4 days salt 0.76 >More info 0.79 >More info Col-0 under control 4 days salt treatment rosette Original data
23 S58-2 0.75 >More info 0.80 >More info wt Original data GEO bulk
24 Elevated CO2 AMPLE N DAY 0.74 >More info 0.81 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
25 ice1 6H Cold 0.73 >More info 0.82 >More info WT 6H Cold Original data GEO bulk
26 cpr5npr1svi1 0.73 >More info 0.82 >More info WT(COL) Original data GEO bulk
27 RPL18 TuMV inoculated polysomal RNA 0.75 >More info 0.79 >More info mock inoculated polysomal RNA PO Original data GEO bulk
28 Leafminer locally damaged thaliana seedlings 0.78 >More info 0.75 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
29 mkk1/mkk2 control rep 0.78 >More info 0.75 >More info Col-0 Time 0 rep Original data GEO bulk
30 Osmotic Stress 24 h (shoot) 0.77 >More info 0.75 >More info Stress mock 24 h (shoot) Original data Stress treatments
31 Col whole leaf 5dpi 0.72 >More info 0.80 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
32 B.cinerea 18 h infection 0.78 >More info 0.74 >More info Mock 18 h Original data Botrytis cinerea infection
33 Botrytis cinerea 18h 0.78 >More info 0.74 >More info control 18h Original data GEO bulk
34 Pto inoculated 0.77 >More info 0.74 >More info col Original data GEO bulk
35 smg7b-1 0.75 >More info 0.76 >More info WT whole plant Original data GEO bulk
36 CMP 24hr 0.75 >More info 0.75 >More info Acetone 24hr root Original data GEO bulk
37 WT-SA 0.73 >More info 0.76 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
38 OH1 0.74 >More info 0.75 >More info Col-0 leaves Original data GEO bulk
39 abi4 vtc2 (I) 0.72 >More info 0.77 >More info Col (I) rosette Original data GEO bulk
40 vtc2 (I) 0.69 >More info 0.79 >More info Col (I) rosette Original data GEO bulk
41 upf3 0.77 >More info 0.71 >More info WT whole plant Original data GEO bulk
42 edr1 18 h powdery mildew 0.72 >More info 0.76 >More info Col-0 18 h powdery mildew Original data GEO bulk
43 treated group 0.72 >More info 0.75 >More info Control group Original data
44 AvrRpt2 Col-0 6hpi 0.75 >More info 0.72 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
45 pmr5 pmr6 0.72 >More info 0.75 >More info Col-0 Original data GEO bulk
46 Cor 10h 0.72 >More info 0.75 >More info Mock 10h Cor Original data GEO bulk
47 Sulfometuron EC50 0.78 >More info 0.69 >More info Carrier Original data GEO bulk
48 Col whole leaf 7dpi 0.67 >More info 0.79 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
49 ceh1 mutant 0.74 >More info 0.72 >More info Parent line Original data
50 IRP1-OE-Fe--shoot 0.70 >More info 0.76 >More info COL-0-Fe--shoot shoot Original data
51 Col-0 9 hpi A. brassicicola 0.71 >More info 0.75 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
52 WT-NOCO2 INFECTED 0.71 >More info 0.75 >More info WT-MOCK Original data GEO bulk
53 cpr5 0.72 >More info 0.74 >More info WT seedling Original data GEO bulk
54 col-5 hrpA 12h 0.70 >More info 0.76 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
55 ataf1-1 mutant Col-0 Bgh inoculated 0.72 >More info 0.74 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
56 aox1a(line) MLD stressed 0.75 >More info 0.70 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
57 bak1-3 +Pep2 10h 0.71 >More info 0.73 >More info WT +Pep2 10h Pep2 Original data GEO bulk
58 eds16 whole leaf 5dpi -0.67 >More info -0.77 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
59 WT powdery mildew 0.68 >More info 0.76 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
60 Col-0-avrB-6h 0.69 >More info 0.75 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
61 PAHs stress 0.73 >More info 0.71 >More info exp control phenanthrene whole plants Original data GEO bulk
62 Elevated CO2 AMPLE N NIGHT 0.63 >More info 0.80 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
63 penta Alternaria 3dpi 0.77 >More info 0.66 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
64 SA 4mM 0.78 >More info 0.65 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
65 hrpA 7h 0.71 >More info 0.72 >More info Mock 7h hrpA Original data GEO bulk
66 8h-DC3000 avrRpm1 0.70 >More info 0.73 >More info 8h-DC3000 leaves Original data GEO bulk
67 35S:RPS4 eds1-2 8h -0.71 >More info -0.72 >More info 35S:RPS4 8h leaves Original data
68 DC3000 24h 0.70 >More info 0.73 >More info Mock 24h DC3000 Original data GEO bulk
69 ice1 24H Cold 0.66 >More info 0.76 >More info WT 24H Cold Original data GEO bulk
70 GST NPP1 4 h (leaf) 0.70 >More info 0.72 >More info Mock 4 h (leaf) Original data Elicitor treatments
71 sni1 0.64 >More info 0.78 >More info WT Original data GEO bulk
72 Cor hrpS 10h 0.73 >More info 0.69 >More info Mock 10h Cor hrpS Original data GEO bulk
73 flu over-tAPX 0.66 >More info 0.75 >More info WT Col Original data GEO bulk
74 PBZ 0.69 >More info 0.72 >More info none PBZ Rosette Original data GEO bulk
75 ein2-1 9 hpi A. brassicicola 0.70 >More info 0.71 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
76 rpoTmp(line) MLD stressed 0.71 >More info 0.70 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
77 Fenclorim 4hr 0.69 >More info 0.72 >More info Acetone 4hr root Original data GEO bulk
78 DC3000 2 h (leaf) 0.69 >More info 0.71 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
79 Flagellin 4 h (leaf) 0.69 >More info 0.71 >More info Mock 4 h (leaf) Original data Elicitor treatments
80 Col0-PsmES4326-24hpi 0.79 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
81 Col-0 INA 48h 0.64 >More info 0.75 >More info Col-0 MOCK 48h Original data GEO bulk
82 hrcC 0.67 >More info 0.72 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
83 S15-118 0.66 >More info 0.73 >More info wt Original data GEO bulk
84 ice1 3H Cold 0.70 >More info 0.69 >More info WT 3H Cold Original data GEO bulk
85 Laer treat paclobutrazol (PAC) 0.70 >More info 0.69 >More info Laer Control leaf discs Original data GEO bulk
86 E.coli TUV86 2 fliC 7h 0.70 >More info 0.68 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
87 CMP 4hr 0.67 >More info 0.71 >More info Acetone 4hr root Original data GEO bulk
88 npr1-3 DCA 48h 0.65 >More info 0.73 >More info npr1-3 MOCK 48h Original data GEO bulk
89 seedlings-week-old RECA1-overexpressing
transgenic		 0.64 >More info 0.74 >More info seedlings-week-old Col-0 seedlings Original data
90 Shoot -K 0.72 >More info 0.66 >More info Control-shoot Original data GEO bulk
91 col-5 DC3000 12h 0.68 >More info 0.70 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
92 K starvation (shoot) 0.72 >More info 0.66 >More info Ws (shoot) Original data GEO bulk
93 flu 0.66 >More info 0.71 >More info WT Col Original data GEO bulk
94 smg5-2 0.73 >More info 0.64 >More info WT whole plant Original data GEO bulk
95 Mature callus 0.69 >More info 0.68 >More info Young callus hypocotyls Original data GEO bulk
96 UV Stress 24 h (shoot) 0.61 >More info 0.76 >More info Stress mock 24 h (shoot) Original data Stress treatments
97 DFPM 0.67 >More info 0.70 >More info control Original data GEO bulk
98 CLO 4mM 0.76 >More info 0.60 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
99 sid2 -0.62 >More info -0.74 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
100 pmr5 0.66 >More info 0.70 >More info Col-0 Original data GEO bulk
101 Col BTH 0.68 >More info 0.67 >More info Col rosettes Original data GEO bulk
102 E.coli 0157 H7 7h 0.69 >More info 0.66 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
103 toc1-1-77hr 0.69 >More info 0.66 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
104 GST 4 h (leaf) 0.59 >More info 0.76 >More info Mock 4 h (leaf) Original data Elicitor treatments
105 ASL9-ox -0.71 >More info -0.64 >More info WT aerial parts of seedlings Original data GEO bulk
106 Leafminer damaged seedlings 0.78 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
107 Lipopolysaccaride4 h (leaf) 0.66 >More info 0.68 >More info Mock 4 h (leaf) Original data Elicitor treatments
108 aba3-1 0.59 >More info 0.75 >More info wt Original data GEO bulk
109 cat2-2; 8h switch to ambient CO2 concentrations; 0.73 >More info 0.61 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
110 Cor 24h 0.60 >More info 0.74 >More info Mock 24h Cor Original data GEO bulk
111 Col-0 SA 0.57 >More info 0.77 >More info Col-0 Original data GEO bulk
112 WT Col-0 Bgh inoculated 0.63 >More info 0.71 >More info WT Col-0 Un-inoculated Original data GEO bulk
113 npr1-1 SA -0.68 >More info -0.65 >More info Col-0 SA complete seedling Original data
114 WT +elf18 10h 0.66 >More info 0.67 >More info WT untreated elf18 Original data GEO bulk
115 erf104-ko Flg22 4h 0.63 >More info 0.70 >More info erf104-ko H2O 4h Original data GEO bulk
116 pepr1-1 Pepr2-3 +Pep2 2h -0.63 >More info -0.70 >More info WT +Pep2 2h Pep2 Original data GEO bulk
117 hrpA fliC 7h 0.72 >More info 0.61 >More info Mock 7h hrpA fliC Original data GEO bulk
118 efr-1 +elf18 10h -0.65 >More info -0.68 >More info WT +elf18 10h elf18 Original data GEO bulk
119 camta1/2/3 warm 0.65 >More info 0.68 >More info WT warm entire aerial part Original data GEO bulk
120 cop1 Seedling BL 0.66 >More info 0.67 >More info WT Seedling BL Original data GEO bulk
121 csn5 (csn5a-2 csn5b) light 0.72 >More info 0.61 >More info WT light Original data GEO bulk
122 Col whole leaf amplified 5 dpi 0.61 >More info 0.72 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
123 ABA DFPM 0.67 >More info 0.66 >More info control Original data GEO bulk
124 gh3.5D uninoculated -0.62 >More info -0.71 >More info Col-0 48 hpi Original data GEO bulk
125 LTN008-2 aza-dc 0.72 >More info 0.60 >More info LTN012-2 Mock Original data
126 Fenclorim 24hr 0.67 >More info 0.64 >More info Acetone 24hr root Original data GEO bulk
127 rosette leaves fdh 0.59 >More info 0.72 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
128 camta1/3 warm 0.55 >More info 0.76 >More info WT warm entire aerial part Original data GEO bulk
129 A. thaliana-A. lyrata hybrid -0.62 >More info -0.69 >More info A. thaliana mature leaves before flowering Original data GEO bulk
130 Glyphosate EC50 0.66 >More info 0.65 >More info Carrier (Glyphosate) Original data GEO bulk
131 sid2-1 cold -0.57 >More info -0.74 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
132 mpk6-ko Flg22 4h 0.61 >More info 0.70 >More info mpk6-ko H2O 4h Original data GEO bulk
133 edr1 36 h powdery mildew 0.64 >More info 0.66 >More info Col-0 36 h powdery mildew Original data GEO bulk
134 sfr3 cold 0.61 >More info 0.69 >More info WT cold All aerial tissue Original data GEO bulk
135 P.syringae AvrRpt2 4 h (leaf) 0.70 >More info 0.60 >More info Mock 4 h (leaf) Original data Elicitor treatments
136 atmyc2 cop1 Seedling BL 0.57 >More info 0.73 >More info WT Seedling BL Original data GEO bulk
137 Phaseolicola 2 h (leaf) 0.65 >More info 0.64 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
138 AvrRpm1 2 h (leaf) 0.60 >More info 0.69 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
139 Ws 100mM NaCl 0.61 >More info 0.68 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
140 Ws leaf 100mM NaCl 0.61 >More info 0.68 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
141 Dark 3day ivd 0.69 >More info 0.60 >More info 0h ivd Original data
142 Te ozone 0.70 >More info 0.59 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
143 ERF96OE 0.65 >More info 0.64 >More info WT leaf Original data
144 aerial organ callus inducing medium 48 h 0.65 >More info 0.64 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
145 4d red light grown hmr-5 seedlings 0.69 >More info 0.60 >More info 4d red light grown WT(Col-0) seedlings Original data
146 wrky33 Bc inoculation 14h 0.72 >More info 0.56 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
147 anac017-2 AntimycinA 3h -0.62 >More info -0.66 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
148 bZIP1ko mutant N+Light- 0.55 >More info 0.73 >More info WT-sib N+Light- whole plant Original data GEO bulk
149 ced1 -0.64 >More info -0.64 >More info WT PEG 6hr seedlings Original data GEO bulk
150 Salt Stress 24 h (shoot) 0.62 >More info 0.65 >More info Stress mock 24 h (shoot) Original data Stress treatments
151 camta3-2 0.56 >More info 0.71 >More info WT Original data GEO bulk
152 pho1 0.70 >More info 0.57 >More info Col2WT Original data GEO bulk
153 msh1 albino 0.61 >More info 0.66 >More info WT aerial part Original data GEO bulk
154 20d after anthesis 0.66 >More info 0.61 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
155 albino Ds13-2198-1 -0.68 >More info -0.59 >More info control Original data GEO bulk
156 pnp1-1 3h +P 0.70 >More info 0.57 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
157 rosettes WT drought 0.70 >More info 0.57 >More info rosettes WT watered Original data GEO bulk
158 Myzus persicae saliva 0.67 >More info 0.60 >More info Control Original data GEO bulk
159 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.71 >More info 0.56 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
160 CAX1/CAX3 mutant 0.58 >More info 0.69 >More info Col whole plant Original data GEO bulk
161 aphid saliva treated 0.67 >More info 0.60 >More info control aphid saliva treated leaves Original data GEO bulk
162 vtc1 (II) 0.65 >More info 0.62 >More info Col (II) rosette Original data GEO bulk
163 low water potential 0.68 >More info 0.59 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
164 35S::ERF104 Flg22 4h 0.61 >More info 0.66 >More info 35S::ERF104 H2O 4h Original data GEO bulk
165 WT AntimycinA 3h 0.61 >More info 0.66 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
166 WT 2-4h Xanthomonas 0.55 >More info 0.71 >More info WT T0 Original data GEO bulk
167 mil4 BTH 0.64 >More info 0.62 >More info Col BTH rosettes Original data GEO bulk
168 WT cold 0.61 >More info 0.65 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
169 D2O 0.61 >More info 0.65 >More info H2O seedling Original data GEO bulk
170 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.69 >More info 0.57 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
171 mkk2 24h BTH rep 0.57 >More info 0.68 >More info Col-0 24h BTH rep Original data GEO bulk
172 csn3-1 light 0.68 >More info 0.57 >More info WT light Original data GEO bulk
173 pad4-PsmES4326-24hpi -0.63 >More info -0.62 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
174 vte2-1 3d vernalization 0.56 >More info 0.69 >More info WT 3d vernalization Original data GEO bulk
175 coi1-16 ein2 sid2 ctrl -0.68 >More info -0.57 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
176 pmr4-1 powdery mildew 0.50 >More info 0.75 >More info WT powdery mildew uninoculated Original data GEO bulk
177 upf1 0.68 >More info 0.56 >More info WT whole plant Original data GEO bulk
178 Primisulfuron EC50 0.61 >More info 0.63 >More info Carrier (primisulfuron) Original data GEO bulk
179 rosettes drought 0.65 >More info 0.59 >More info rosettes watered Original data GEO bulk
180 WT Bc inoculation 14h 0.69 >More info 0.55 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
181 35S::PI ap3-3 35S::AP-GR +DEX 0.54 >More info 0.70 >More info 0hr DEX Original data GEO bulk
182 Mutant siz1-3 0.59 >More info 0.65 >More info Col-0 Original data GEO bulk
183 Col-O high light 0.59 >More info 0.65 >More info Col-O bule light Original data GEO bulk
184 WT in -N 0.62 >More info 0.62 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
185 siz1-3 control 0.59 >More info 0.65 >More info Col-0 control Original data GEO bulk
186 Col-0 C2H4 24h 0.65 >More info 0.59 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
187 toc1-1-49hr 0.56 >More info 0.67 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
188 scrm-D 0.65 >More info 0.58 >More info Col-0 WT whole seedling Original data GEO bulk
189 low CO2 + light 0.58 >More info 0.65 >More info normal CO2 + light Original data GEO bulk
190 Mutant siz1-3 (Drought) 0.61 >More info 0.62 >More info Col-0 (Drought) Original data GEO bulk
191 AgNO3 3 h 0.59 >More info 0.64 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
192 siz1-3 drought 0.61 >More info 0.62 >More info Col-0 drought Original data GEO bulk
193 camta1/2/3 24h cold 0.59 >More info 0.63 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
194 lht1 PstDC3000 48h 0.65 >More info 0.57 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
195 aerial organ callus inducing medium 96 h 0.63 >More info 0.59 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
196 abi4-102 (I) 0.58 >More info 0.63 >More info Col (I) rosette Original data GEO bulk
197 Col-0 flu HL 3h 0.64 >More info 0.57 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
198 pnp1-1 1wk +P 0.65 >More info 0.56 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
199 Col-0 ozone 0.69 >More info 0.52 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
200 pmr4-1 control 0.58 >More info 0.63 >More info WT control uninoculated Original data GEO bulk
201 coi1-2 0.52 >More info 0.68 >More info Col-0 mock Whole seedling Original data GEO bulk
202 Imidazolinone EC50 0.61 >More info 0.59 >More info Carrier (Imidazolinone) Original data GEO bulk
203 Seedling KUA1-IOX est 0.50 >More info 0.70 >More info Seedling KUA1-IOX mock Original data
204 Pst-DC3000(avrRpm1)-4hpi 0.62 >More info 0.58 >More info Pst-DC3000-4hpi Original data GEO bulk
205 WT 1wk -P 0.62 >More info 0.58 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
206 apk1 apk2 0.63 >More info 0.57 >More info Col0-control whole rosette Original data GEO bulk
207 cs26 short-day -0.51 >More info -0.69 >More info Leaves-WT-SD leaf Original data GEO bulk
208 WT +Pep2 10h 0.58 >More info 0.62 >More info WT untreated Pep2 Original data GEO bulk
209 aerial organ callus inducing medium 12 h 0.53 >More info 0.66 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
210 wavy 0.53 >More info 0.66 >More info WT Original data GEO bulk
211 SOS1 0mM NaCl 0.59 >More info 0.60 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
212 nhx5-1/nhx6 0.56 >More info 0.63 >More info WT Rosette leaf Original data GEO bulk
213 Col whole leaf 5 dpi 0.54 >More info 0.65 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
214 ulp1c ulp1d +Pto 0.58 >More info 0.61 >More info ulp1c ulp1d mock Original data GEO bulk
215 UV 0.67 >More info 0.52 >More info WT aerial region Original data GEO bulk
216 Laer Flg22 2h 0.60 >More info 0.59 >More info Laer Control leaf discs Original data GEO bulk
217 anac017-2 H2O2 3h -0.61 >More info -0.58 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
218 toc1-1-53hr 0.57 >More info 0.62 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
219 bio4-1 mutant watered00µM biotin leaves -0.44 >More info -0.75 >More info bio4-1 mutant leaves leaves Original data GEO bulk
220 Tsu -Fe 48h Shoots 0.62 >More info 0.56 >More info Tsu +Fe 24h Shoots Original data GEO bulk
221 ARR22-ox (t-zeatin 3 h) 0.67 >More info 0.51 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
222 WT +elf18 2h 0.50 >More info 0.67 >More info WT untreated elf18 Original data GEO bulk
223 camta2/3 warm 0.53 >More info 0.64 >More info WT warm entire aerial part Original data GEO bulk
224 Col leaves 48h LT 0.57 >More info 0.60 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
225 Col-0 INA 6d 0.56 >More info 0.61 >More info Col-0 MOCK 6d Original data GEO bulk
226 21h-DC3000 avrRpm1 -0.56 >More info -0.61 >More info 21h-DC3000 leaves Original data GEO bulk
227 aerial organ callus inducing medium 24h 0.56 >More info 0.61 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
228 Chitosan 3h Treatment 0.61 >More info 0.56 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
229 Laer pretreat GA Flg22 1h 0.46 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
230 CT101 ozone 0.64 >More info 0.52 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
231 irradiated leaf (WT 1d) 0.62 >More info 0.54 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
232 bio4-1 mutant leaves 0.52 >More info 0.64 >More info WT leaves leaves Original data GEO bulk
233 WT resupplied Pi 4h 0.60 >More info 0.56 >More info WT complete seedlings Original data
234 Triazolopyrimidine EC50 0.60 >More info 0.56 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
235 rosettes myoox drought 0.69 >More info 0.47 >More info rosettes myoox watered Original data GEO bulk
236 pepr1-1 Pepr2-3 +Pep2 10h -0.59 >More info -0.57 >More info WT +Pep2 10h Pep2 Original data GEO bulk
237 rosette leaves lcr 0.46 >More info 0.70 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
238 +1.6 mM Tween 20 1 h. 0.43 >More info 0.73 >More info +distilled water 1 h. Original data GEO bulk
239 RRE2 Chitin 0.56 >More info 0.59 >More info Chitin Original data GEO bulk
240 shoots bhlh100/101 0uM Fe 0.64 >More info 0.51 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
241 overexpresser LBD38 in -N -0.60 >More info -0.55 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
242 ein5-1 ski2-3 0.63 >More info 0.52 >More info Col-0 aerial tissue Original data
243 Col-Luc WT 3h antimycin A 0.57 >More info 0.58 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
244 atmospheric CO2 low Mg shoot 0.65 >More info 0.50 >More info atmospheric CO2 normal Mg shoot Shoot Original data
245 AFB1 0h 0.56 >More info 0.58 >More info Col 0h Leaf Original data GEO bulk
246 Elevated CO2 fully expanded leaf 0.65 >More info 0.49 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
247 brm-101 0.53 >More info 0.61 >More info Ler Original data GEO bulk
248 atgsnor1-1 -0.60 >More info -0.54 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
249 anac017-1 H2O2 3h -0.56 >More info -0.58 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
250 seedlings protease IV 0.53 >More info 0.61 >More info seedlings nontreated control whole seedling Original data
251 safener treated 0.52 >More info 0.62 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
252 nia1nia2 0.56 >More info 0.58 >More info Col-0 whole seedlings Original data GEO bulk
253 Heat shock optimum 0.49 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
254 rosette Dark Wounded 0.45 >More info 0.68 >More info rosette Dark Control Original data GEO bulk
255 gun1gun5 far-red pretreated -0.55 >More info -0.58 >More info WT far-red pretreated Original data GEO bulk
256 Leafminer systemically damaged thaliana seedlings 0.54 >More info 0.59 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
257 6h +Pi -0.52 >More info -0.61 >More info 6h -Pi root Original data GEO bulk
258 BLM+INA 0.52 >More info 0.60 >More info CK BLM and INA seedling Original data
259 TNT-seedlings 0.50 >More info 0.62 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
260 cs26 long day 0.55 >More info 0.56 >More info Leaves-WT-LD leaf Original data GEO bulk
261 DC3000 7h 0.54 >More info 0.57 >More info Mock 7h DC3000 Original data GEO bulk
262 8hr-pH4.5 0.54 >More info 0.57 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
263 WT no Pi 0.58 >More info 0.53 >More info WT complete seedlings Original data
264 nhx5-2/nhx6 0.51 >More info 0.59 >More info WT Rosette leaf Original data GEO bulk
265 over-tAPX -0.56 >More info -0.54 >More info WT Col Original data GEO bulk
266 OE WRKY63.3 high light 0.50 >More info 0.60 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
267 Cold Stress 24 h (shoot) 0.49 >More info 0.61 >More info Stress mock 24 h (shoot) Original data Stress treatments
268 oas-a1.1 Cd 18h 0.42 >More info 0.68 >More info Cd 18h root Root Original data GEO bulk
269 lht1 untreated 0.56 >More info 0.53 >More info WT untreated untreated leaf Original data GEO bulk
270 coi1-16 ein2 sid2 ozone 0.65 >More info 0.44 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
271 Atss3 Light4 -0.51 >More info -0.58 >More info Atss3 Dark0.5 Original data GEO bulk
272 tor mutant glucose 0.57 >More info 0.52 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
273 Light 3day wt -0.48 >More info -0.61 >More info 0h wt Original data
274 M6PR transgenic 0mM NaCl 0.52 >More info 0.56 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
275 Nicotinamide-53hr 0.55 >More info 0.53 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
276 Leaf GLU1-KO 0.59 >More info 0.49 >More info Leaf Col(0) rosette leaves Original data GEO bulk
277 C24 ozone 0.62 >More info 0.46 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
278 OE WRKY40.4 high light 0.50 >More info 0.58 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
279 gpa1-4/agb1-2 ozone 2d -0.54 >More info -0.54 >More info Col ozone 2d ozone Original data GEO bulk
280 Col-0 leaf drought 0.53 >More info 0.55 >More info Col-0 leaf water leaf Original data GEO bulk
281 Col-0 Flg22 4h 0.45 >More info 0.63 >More info Col-0 H2O 4h Original data GEO bulk
282 Compost 0.49 >More info 0.59 >More info Perlite Compost Original data GEO bulk
283 dde2-2 9 hpi A. brassicicola 0.52 >More info 0.55 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
284 arf2 brz -0.53 >More info -0.54 >More info arf2 mock Original data GEO bulk
285 Drought Stress 24 h (shoot) 0.50 >More info 0.57 >More info Stress mock 24 h (shoot) Original data Stress treatments
286 aox1a(line) untreated -0.58 >More info -0.49 >More info WT(Col0) untreated (control aox1a) leaf Original data
287 Dark 2day hml 0.58 >More info 0.49 >More info 0h hml Original data
288 pnp1-1 3h -P 0.57 >More info 0.50 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
289 leaf13 0.50 >More info 0.57 >More info unwounded leaves none Original data GEO bulk
290 CHLM overexpression -0.50 >More info -0.57 >More info Col-0 estr green tissue Original data GEO bulk
291 IRP1-OE-Ctrl--shoot 0.60 >More info 0.47 >More info COL-0-Ctrl--shoot shoot Original data
292 eds16 whole leaf 0h UI -0.35 >More info -0.72 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
293 Col-0 DCA 48h 0.37 >More info 0.70 >More info Col-0 MOCK 48h Original data GEO bulk
294 12h-DC3000 avrRpm1 0.49 >More info 0.58 >More info 12h-DC3000 leaves Original data GEO bulk
295 mbd6 mutant thaliana 10-day-old seedling 0.52 >More info 0.54 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
296 WT 1mM phosphate 8 hours. -0.54 >More info -0.52 >More info WT control (not supplemented). Original data
297 oas-a1.1 Cd 24h 0.44 >More info 0.62 >More info Cd 24h root Shoot Original data GEO bulk
298 toc1-1-57hr 0.49 >More info 0.57 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
299 oligomycin 4 h 0.52 >More info 0.53 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
300 del1-1 5dpi 0.67 >More info 0.38 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
301 Dark 3day hml 0.56 >More info 0.49 >More info 0h hml Original data
302 24h +Pi -0.53 >More info -0.52 >More info 24h -Pi root Original data GEO bulk
303 Dark 2day wt 0.56 >More info 0.49 >More info 0h wt Original data
304 Salt Stress 24 h (root) 0.55 >More info 0.50 >More info Stress mock 24 h (root) Original data Stress treatments
305 miR393 0h -0.37 >More info -0.68 >More info WT 0h Leaf tissue Original data GEO bulk
306 WT 3h -P 0.45 >More info 0.60 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
307 1 h Light IP RNA -0.49 >More info -0.56 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
308 WT H2O2 3h 0.46 >More info 0.59 >More info WT water 3h 3h_H2O2 Original data GEO bulk
309 AsAKiin11 T2 0.49 >More info 0.56 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
310 cat2-hCO2 -0.58 >More info -0.47 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
311 Col-0 drought 0.58 >More info 0.47 >More info Col-0 control Original data GEO bulk
312 shoot-10 μM DEX- 6 hr 0.47 >More info 0.58 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
313 spx1 spx2 complete 0.55 >More info 0.49 >More info WT complete seedlings Original data
314 irradiated leaf (cmt 1d) 0.62 >More info 0.42 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
315 Nicotinamide-49hr 0.54 >More info 0.50 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
316 Mutant coi1(leaf) -0.54 >More info -0.50 >More info Col-0 (leaf) Original data GEO bulk
317 Dark 6h ivd 0.49 >More info 0.55 >More info 0h ivd Original data
318 toc1-1-73hr 0.43 >More info 0.61 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
319 R. solani AG8 0.47 >More info 0.57 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
320 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.48 >More info 0.56 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
321 SA 0.50 >More info 0.53 >More info WT mock Whole seedling Original data GEO bulk
322 atmospheric CO2 high Mg shoot 0.58 >More info 0.45 >More info atmospheric CO2 normal Mg shoot Shoot Original data
323 Mutant gh3.5-1D 0.42 >More info 0.61 >More info Col-0 Original data GEO bulk
324 rosette leaves bdg 0.43 >More info 0.60 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
325 leaf blade in D 0.45 >More info 0.58 >More info leaf blade in WL leaf blades Original data GEO bulk
326 R. solani AG2-1 0.53 >More info 0.49 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
327 35:SUB1A 0.57 >More info 0.45 >More info WT whole seedling Original data GEO bulk
328 35S-MIF1 light grown 0.62 >More info 0.40 >More info Light-grown WT control Original data GEO bulk
329 T6 leaf-drought 0.47 >More info 0.55 >More info T6 leaf-well watered Original data GEO bulk
330 0.125 mM gold 24 h 0.47 >More info 0.55 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
331 S14-150 0.49 >More info 0.53 >More info wt Original data GEO bulk
332 9 hr Hypoxia IP RNA 0.46 >More info 0.56 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
333 root Dosed gold 0.47 >More info 0.55 >More info root No gold .125 mM gold 24 h roots Original data
334 Dark 3day wt 0.54 >More info 0.47 >More info 0h wt Original data
335 SPT4-R3 seedlings0 DAS 0.52 >More info 0.49 >More info Col-0 seedlings0 DAS seedlings Original data
336 tt4 0.50 >More info 0.51 >More info Col-0 aerial part Original data
337 WT Shoot-Pi 0.57 >More info 0.44 >More info WT Shoot+Pi shoots Original data GEO bulk
338 Nicotinamide-73hr 0.54 >More info 0.47 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
339 M6PR transgenic leaf 100mM NaCl -0.44 >More info -0.57 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
340 WT 24H Cold 0.46 >More info 0.55 >More info WT control Original data GEO bulk
341 Mutant cry1 (High Light) -0.57 >More info -0.43 >More info Col-0 (High Light) Original data GEO bulk
342 Laer Flg22+GA 2h 0.52 >More info 0.48 >More info Laer Control leaf discs Original data GEO bulk
343 abh1 -ABA 0.60 >More info 0.40 >More info Col-0 -ABA Original data GEO bulk
344 ARR21C-ox 0.59 >More info 0.41 >More info Col-0 Original data ARR21C overexpression
345 WT flg22 2h 0.51 >More info 0.49 >More info WT 0h Leaf tissue Original data GEO bulk
346 cry1 high light -0.57 >More info -0.43 >More info Col-O high light Original data GEO bulk
347 T8 leaf-drought 0.46 >More info 0.54 >More info T8 leaf-well watered Original data GEO bulk
348 Col laser microdissected 5 dpi 0.42 >More info 0.58 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
349 sex1-3 0.44 >More info 0.56 >More info Col-WT leaves Original data GEO bulk
350 P.p 30hai 0.45 >More info 0.55 >More info At-Control roots Original data GEO bulk
351 lug3 leaves -0.48 >More info -0.52 >More info WT-leaves matured rosette leaves Original data GEO bulk
352 myb3 myb3r4d 0.45 >More info 0.55 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
353 MIL4 ox BTH 0.47 >More info 0.53 >More info Col BTH Original data GEO bulk
354 aox1a:rpoTmp untreated 0.43 >More info 0.57 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
355 Phytoprostane A1 4 h 0.52 >More info 0.47 >More info Col-0 Original data GEO bulk
356 seedlings +5AC 0.54 >More info 0.45 >More info control seedlings 10-day old whole seedling Original data GEO bulk
357 apum23 0.53 >More info 0.46 >More info WT (Col-3) aerial parts Original data GEO bulk
358 35S-MIF1 dark grown 0.54 >More info 0.45 >More info Dark-grown WT control Original data GEO bulk
359 SCR-GR Time 1H Dex 0.43 >More info 0.56 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
360 Shoot submergence 24h 0.46 >More info 0.53 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
361 A6 mutant 0.41 >More info 0.58 >More info WT rosette leaves Rosette leaves Original data GEO bulk
362 GO5; 8h switch to ambient CO2 concentrations; 0.45 >More info 0.54 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
363 WT leaf-drought 0.50 >More info 0.48 >More info WT leaf-well watered Original data GEO bulk
364 NAA -AA 0.51 >More info 0.47 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
365 C2 leaf-drought 0.56 >More info 0.42 >More info C2 leaf-well watered Original data GEO bulk
366 scrm-D:mute 0.54 >More info 0.44 >More info Col-0 WT whole seedling Original data GEO bulk
367 gai Control 0.53 >More info 0.45 >More info Laer Control leaf discs Original data GEO bulk
368 Tsu -Fe 24h Shoots 0.56 >More info 0.42 >More info Tsu +Fe 24h Shoots Original data GEO bulk
369 sid2-2 9 hpi A. brassicicola 0.55 >More info 0.43 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
370 csn4-1 dark 0.60 >More info 0.38 >More info WT light Original data GEO bulk
371 eds16 whole leaf 7dpi -0.37 >More info -0.61 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
372 FOX line K16331 0.44 >More info 0.54 >More info empty vector control (T3) FOX lines Original data GEO bulk
373 siliques AtHb1 control 0.46 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
374 nas4x leaves - Fe -0.44 >More info -0.54 >More info WT leaves - Fe Leaves Original data GEO bulk
375 16h Col-0 0.37 >More info 0.61 >More info 00h Col-0 Original data GEO bulk
376 sfr2 control -0.46 >More info -0.52 >More info WT control All aerial tissue Original data GEO bulk
377 Laer pretreat GA Flg22 2h 0.53 >More info 0.44 >More info Laer pretreat water control leaf discs Original data GEO bulk
378 8-DAC chr11-1chr17-1 0.53 >More info 0.44 >More info 8-DAC Col-0 leaf explants Original data
379 Nicotinamide-69hr 0.51 >More info 0.46 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
380 leaf chr11-1chr17-1 0.54 >More info 0.43 >More info leaf Col-0 leaves Original data GEO bulk
381 JA 0.46 >More info 0.51 >More info Col-0 mock Whole seedling Original data GEO bulk
382 amiR-tor induced 6d 0.37 >More info 0.60 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
383 WT+H2O2 0.40 >More info 0.56 >More info WT H2O2 Original data GEO bulk
384 col-5 hrpA 2h 0.54 >More info 0.42 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
385 rosettes atx drought 0.55 >More info 0.41 >More info rosettes atx watered Original data GEO bulk
386 WT +Pep2 2h 0.61 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
387 rosette Light Wounded 0.35 >More info 0.61 >More info rosette Light Control Original data GEO bulk
388 Col leaf 100mM NaCl 0.42 >More info 0.54 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
389 miR393 flg22 2h 0.41 >More info 0.55 >More info WT 0h Leaf tissue Original data GEO bulk
390 Col leaf 100mM NaCl 0.42 >More info 0.54 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
391 Col 100mM NaCl 0.42 >More info 0.54 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
392 12h Col-0 0.37 >More info 0.59 >More info 00h Col-0 Original data GEO bulk
393 Constans-mutant 0.53 >More info 0.42 >More info Col control above-ground whole plant Original data GEO bulk
394 Nicotinamide-81hr 0.52 >More info 0.43 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
395 penta Control 0.62 >More info 0.33 >More info Laer Control leaf discs Original data GEO bulk
396 Got7 UV 0.38 >More info 0.57 >More info Got7 mock UV seedling Original data
397 npr1-PsmES4326-24hpi -0.43 >More info -0.52 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
398 gpa1 -ABA GC -0.34 >More info -0.61 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
399 Starch sheath 5 days MS incubation 0.45 >More info 0.50 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
400 Col ozone 3h 0.37 >More info 0.58 >More info Col clean-air 3h ozone Original data GEO bulk
401 Time-0 chr11-1chr17-1 -0.42 >More info -0.53 >More info Time-0 Col-0 leaf explants Original data
402 root endodermis and quiescent center 40 mM NaCl 0.38 >More info 0.56 >More info root endodermis and quiescent center Original data GEO bulk
403 CMV-A2b mutant 0.63 >More info 0.31 >More info Mock-At Aerial tissues Original data GEO bulk
404 plant (tga2-5-6) 4h phytoprostane A1 0.53 >More info 0.41 >More info plant (tga2-5-6) 4h control Original data GEO bulk
405 Atss3 Light1 -0.33 >More info -0.61 >More info Atss3 Dark0.5 Original data GEO bulk
406 Shoot dark control 7h 0.41 >More info 0.53 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
407 WT 6H Cold 0.35 >More info 0.59 >More info WT control Original data GEO bulk
408 sta1 0.54 >More info 0.39 >More info WT Original data GEO bulk
409 stn7-1 -0.38 >More info -0.55 >More info Col-0 rosette leaves Original data GEO bulk
410 20h Col-0 0.37 >More info 0.56 >More info 00h Col-0 Original data GEO bulk
411 rcf1-1 cold 24h 0.52 >More info 0.41 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
412 sav1-1 light 0.43 >More info 0.50 >More info Col-0 light seedlings Original data GEO bulk
413 seedling 1.5h after HZE atm-1 0.43 >More info 0.50 >More info seedling day 1 unirradiated atm-1 1.5h Original data
414 vte2 leaves 48h LT 0.53 >More info 0.39 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
415 chito-octamer 0.37 >More info 0.55 >More info Col Mock Original data GEO bulk
416 Differentiation 12h 0.50 >More info 0.42 >More info Differentiation 0h leaves Original data
417 bHLH122 ox -0.41 >More info -0.51 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
418 HSP90 Reduced RNAi-B1 0.41 >More info 0.51 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
419 RRE1 Chitin 0.51 >More info 0.40 >More info Chitin Original data GEO bulk
420 ataf1-1 mutant Col-0 Un-inoculated -0.53 >More info -0.38 >More info WT Col-0 Un-inoculated Original data GEO bulk
421 eds16 whole leaf 6hpi -0.38 >More info -0.53 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
422 ABA SA 24h 0.39 >More info 0.52 >More info EtOH 24h 24hr Original data GEO bulk
423 08h Col-0 0.36 >More info 0.55 >More info 00h Col-0 Original data GEO bulk
424 rsa3-1 Na 24h 0.25 >More info 0.66 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
425 pnp1-1 1wk -P 0.59 >More info 0.32 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
426 ABA JA 24h 0.30 >More info 0.61 >More info EtOH 24h 24hr Original data GEO bulk
427 seedling 6h after HZE WT 0.34 >More info 0.56 >More info seedling day 1 unirradiated WT 6h Original data
428 Nicotinamide-93hr 0.51 >More info 0.39 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
429 WT light -0.50 >More info -0.40 >More info WT dark Original data GEO bulk
430 WT+chitooctaose 0.27 >More info 0.63 >More info WT+water chitooctaose seedlings Original data GEO bulk
431 root stele 40 mM NaCls 0.36 >More info 0.54 >More info root stele Original data GEO bulk
432 Col-0 V. longisporum-inoculated 48 hpi 0.37 >More info 0.53 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
433 ex1ex2flu dark 8hours/30 minute light -0.59 >More info -0.31 >More info col dark 8hours/30 minute light Original data GEO bulk
434 seedling 12h after HZE atm-1 0.30 >More info 0.60 >More info seedling day 1 unirradiated atm-1 12h Original data
435 WT cold 12 h 0.34 >More info 0.55 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
436 Laer Flg22 1h 0.50 >More info 0.39 >More info Laer Control leaf discs Original data GEO bulk
437 plant (tga2-5-6) 4h OPDA 0.53 >More info 0.36 >More info plant (tga2-5-6) 4h control Original data GEO bulk
438 clf-28 swn-7 0.53 >More info 0.36 >More info Col whole plant Original data GEO bulk
439 9 hr Hypoxia 1 hr recovery IP RNA 0.38 >More info 0.51 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
440 des1 water 0.56 >More info 0.32 >More info WT water water leaf Original data GEO bulk
441 cell culture 4 h phytoprostane A1 0.35 >More info 0.52 >More info cell culture 4 h control Original data GEO bulk
442 miR 0h 0.30 >More info 0.56 >More info Col 0h Leaf Original data GEO bulk
443 Shoot dark control 24h 0.33 >More info 0.53 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
444 GO5; 0h switch to ambient CO2 concentrations; -0.59 >More info -0.27 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
445 downy mildew cotyledons late stage 0.59 >More info 0.27 >More info mock inoculated Cotyledons Original data GEO bulk
446 seedling 12h after HZE WT 0.25 >More info 0.61 >More info seedling day 1 unirradiated WT 12h Original data
447 phr1 phl1 Root-Pi 0.52 >More info 0.33 >More info WT Shoot+Pi roots Original data GEO bulk
448 Cycloheximide 3 h 0.33 >More info 0.52 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
449 chito-tetramer 0.32 >More info 0.52 >More info Col Mock Original data GEO bulk
450 GA 0.31 >More info 0.53 >More info none GA Rosette Original data GEO bulk
451 Cs shoot -0.19 >More info -0.65 >More info control shoot Original data GEO bulk
452 WT 3H Cold 0.14 >More info 0.70 >More info WT control Original data GEO bulk
453 AtMYB30-ox 90-105 min Xanthomonas 0.52 >More info 0.30 >More info WT 90-105 min Xanthomonas Original data GEO bulk
454 Col in Pi deficiency medium 0.19 >More info 0.63 >More info Col in control medium root Original data GEO bulk
455 ORS1 induced 0.29 >More info 0.53 >More info mock-induced rosette leaves Original data GEO bulk
456 root protophloem 40 mM NaCl 0.32 >More info 0.50 >More info root protophloem Original data GEO bulk
457 eif3h 0.58 >More info 0.24 >More info WT Original data GEO bulk
458 hira-root -0.29 >More info -0.52 >More info WT-root root Original data
459 Atwrky63 -0.60 >More info -0.20 >More info Col0 none leaf Original data GEO bulk
460 mbd4 mutant thaliana 10-day-old seedling 0.52 >More info 0.28 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
461 DC3000 hrcC 2 h (leaf) 0.30 >More info 0.50 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
462 npr1-3 MOCK 48h -0.20 >More info -0.60 >More info Col-0 MOCK 48h Original data GEO bulk
463 IAA7mII over-expressor IAA Treated 0.11 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
464 OE-HRA1 2HS  0.50 >More info 0.29 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
465 hst5 0.27 >More info 0.52 >More info Col-0 Original data GEO bulk
466 amiRAP hypoxic -0.29 >More info -0.50 >More info hypoxic hypoxia Original data GEO bulk
467 seedling 6h after HZE atm-1 0.27 >More info 0.52 >More info seedling day 1 unirradiated atm-1 6h Original data
468 SA Treated 0.71 >More info 0.08 >More info Water Original data GEO bulk
469 Col-0 24hpi A. brassicicola 0.76 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
470 OE-HRA1 NS  0.50 >More info 0.28 >More info Col-0NS 2 h non-stress (2NS) 7-day-old seedlings Original data
471 E.orontii Infection 3 day 0.15 >More info 0.63 >More info Uninfection 3 day Original data Elicitor treatments
472 RGA-GR-DEX 0.25 >More info 0.53 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
473 npr1 0.20 >More info 0.58 >More info WT(COL) Original data GEO bulk
474 35S:RPS4 eds1-2 2h -0.16 >More info -0.62 >More info 35S:RPS4 2h leaves Original data
475 seedling 12h after Gamma atm-1 0.20 >More info 0.58 >More info seedling day 1 unirradiated atm-1 12h Original data
476 AtMYB30-ox 2-4h Xanthomonas 0.64 >More info 0.13 >More info WT 2-4h Xanthomonas Original data GEO bulk
477 A. thaliana-A. halleri hybrid -0.50 >More info -0.27 >More info A. thaliana mature leaves before flowering Original data GEO bulk
478 Ambient CO2 LIMITING N DAY 0.51 >More info 0.26 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
479 long 14-degree- 0.50 >More info 0.26 >More info control long Original data GEO bulk
480 vte2 leaves 120h LT 0.72 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
481 agb1 gpa1 -ABA GC -0.25 >More info -0.51 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
482 opr3 OPDA 2 h 0.06 >More info 0.70 >More info opr3 0 h Original data GEO bulk
483 3x(p) 0.25 >More info 0.51 >More info 2x two week old seedlings Original data
484 GST-overexpression seedlings control 0.57 >More info 0.18 >More info WT seedlings control Seedlings Original data
485 phyB mutant 22C 10hrs -0.25 >More info -0.50 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
486 camta1-2 0.16 >More info 0.59 >More info Col-0-WT Original data GEO bulk
487 CeO2 germinant -0.23 >More info -0.52 >More info Millipore Water germinant CeO2 seedling Original data
488 rpl24 total 0.50 >More info 0.24 >More info WT total seedling shoot/aerial seedling Original data
489 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.62 >More info -0.12 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
490 Mutant sav3-2 (SH) 0.24 >More info 0.50 >More info Col-0 (SH) Original data GEO bulk
491 35SAvr 0.19 >More info 0.55 >More info Ecotype Col Original data GEO bulk
492 JA 3h 0.13 >More info 0.61 >More info EtOH 3h 3hr Original data GEO bulk
493 sav3-2 shade 0.24 >More info 0.50 >More info Col-0 shade seedlings Original data GEO bulk
494 35S:RPS4 rrs1-11 T0 0.20 >More info 0.54 >More info 35S:RPS4 T0 leaves Original data
495 WT NAA 2h -0.11 >More info -0.62 >More info WT 0h Leaf tissue Original data GEO bulk
496 eif3h non-polysome 0.54 >More info 0.18 >More info WT non-polysome Original data GEO bulk
497 ABA 1 h 0.22 >More info 0.50 >More info Mock 1 h Original data Basic hormone treatment of seedlings
498 4C 2h(SOIL) 0.20 >More info 0.52 >More info 4C 0h(SOIL) Original data GEO bulk
499 light -0.53 >More info -0.18 >More info dark light seedling Original data GEO bulk
500 Protoplast Induced 0.10 >More info 0.60 >More info Uninduced Original data GEO bulk
501 ex1 flu dark 8hours/30 minute light -0.53 >More info -0.16 >More info col dark 8hours/30 minute light Original data GEO bulk
502 eif3h polysome 0.52 >More info 0.17 >More info WT polysome Original data GEO bulk
503 Col-0 +lincomycin 0.16 >More info 0.53 >More info Col-0 -lincomycin Original data GEO bulk
504 FLIGHT TAGESB plate6 ROOTS 0.07 >More info 0.62 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
505 SA 3h 0.17 >More info 0.50 >More info EtOH 3h 3hr Original data GEO bulk
506 OE WRKY63.3 0.11 >More info 0.56 >More info OE WRKY40.4 none leaf Original data GEO bulk
507 HairpinZ 4 h (leaf) 0.69 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
508 Col PSTDC3000 24h 0.78 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
509 ein2 0.63 >More info 0.02 >More info Col-0 Leaves Original data GEO bulk
510 pvip1 pvip2 seedling 0.66 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
511 Mutant lwd1_lwd2 0.10 >More info 0.54 >More info Wildtype for phy mutants Original data GEO bulk
512 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.10 >More info 0.54 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
513 t-zeatin 0.5 h -0.10 >More info -0.53 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
514 bri1-116 -0.10 >More info 0.73 >More info Col seedling Original data GEO bulk
515 Shoot P recovery 0.51 >More info 0.11 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
516 WT roots - Fe 0.52 >More info 0.08 >More info WT roots + Fe Roots Original data GEO bulk
517 amiRAP aerobic -0.05 >More info -0.52 >More info WT aerobic aerobic Original data GEO bulk
518 Whole root - low pH 1H 0.07 >More info 0.50 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
519 seedling 12h after Gamma WT 0.07 >More info 0.50 >More info seedling day 1 unirradiated WT 12h Original data
520 P. infestans 6 h (leaf) 0.72 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
521 NahG 0.51 >More info 0.05 >More info Col-0 Leaves Original data GEO bulk
522 myb61 xylem -0.01 >More info 0.55 >More info wt xylem xylem Original data GEO bulk
523 Shoot submergence 7h 0.53 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
524 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
525 Dark 2day ivd 0.51 >More info -0.01 >More info 0h ivd Original data
526 opr3 JA 0.5 h -0.08 >More info 0.57 >More info opr3 0 h Original data GEO bulk
527 seed germinating in countinuous light 24h SL -0.19 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
528 agb1 -ABA GC 0.14 >More info -0.61 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
529 opr3 OPDA 0.5 h -0.14 >More info 0.54 >More info opr3 0 h Original data GEO bulk
530 Leaf wounded -0.14 >More info 0.53 >More info Leaf control vegetative leaf Original data GEO bulk
531 Shoot apex inflorescence (after bolting) -0.29 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
532 G3P 0.57 >More info -0.21 >More info Mock distal leaves Original data GEO bulk
533 Light 3day hml -0.32 >More info 0.51 >More info 0h hml Original data