4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on rosette leaves lcr
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List of experiments correlated with "rosette leaves lcr"  Help Download transcriptome of top 30
Score Experiment Correlation from
rosette leaves lcr		 Correlation to
rosette leaves lcr		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 rosette leaves lcr 1.00 >More info 1.00 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
2 rosette leaves bdg 0.87 >More info 0.91 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
3 rosette leaves fdh 0.88 >More info 0.85 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
4 Ws 100mM NaCl 0.77 >More info 0.72 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
5 Ws leaf 100mM NaCl 0.77 >More info 0.72 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
6 Col leaf 100mM NaCl 0.69 >More info 0.70 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
7 Col leaf 100mM NaCl 0.69 >More info 0.70 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
8 Col 100mM NaCl 0.69 >More info 0.70 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
9 +1.6 mM Tween 20 1 h. 0.51 >More info 0.84 >More info +distilled water 1 h. Original data GEO bulk
10 Atss3 Light4 -0.70 >More info -0.64 >More info Atss3 Dark0.5 Original data GEO bulk
11 Leafminer locally damaged thaliana seedlings 0.71 >More info 0.62 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
12 P.syringae vir 4 h (leaf) 0.64 >More info 0.69 >More info Mock 4 h (leaf) Original data Elicitor treatments
13 Lipopolysaccaride4 h (leaf) 0.64 >More info 0.66 >More info Mock 4 h (leaf) Original data Elicitor treatments
14 M6PR transgenic leaf 0mM NaCl 0.56 >More info 0.74 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
15 Te 1d 0.61 >More info 0.67 >More info Te CA Leaves Original data
16 Col-0-avrB-6h 0.66 >More info 0.62 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
17 HopZ1a treated ulp1c ulp1d 0.71 >More info 0.57 >More info col Original data GEO bulk
18 treated group 0.69 >More info 0.58 >More info Control group Original data
19 Leafminer damaged seedlings 0.71 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
20 aerial organ callus inducing medium 12 h 0.63 >More info 0.62 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
21 scrm-D 0.74 >More info 0.51 >More info Col-0 WT whole seedling Original data GEO bulk
22 shoot-10 μM DEX- 6 hr 0.61 >More info 0.63 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
23 GST 4 h (leaf) 0.58 >More info 0.66 >More info Mock 4 h (leaf) Original data Elicitor treatments
24 Heat shock optimum 0.59 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
25 aerial organ callus inducing medium 48 h 0.76 >More info 0.47 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
26 leaf blade in D 0.54 >More info 0.68 >More info leaf blade in WL leaf blades Original data GEO bulk
27 Nicotinamide-93hr 0.58 >More info 0.64 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
28 tt4 0.60 >More info 0.62 >More info Col-0 aerial part Original data
29 Pto inoculated 0.70 >More info 0.51 >More info col Original data GEO bulk
30 HopZ1a treated 0.69 >More info 0.52 >More info col Original data GEO bulk
31 8h-DC3000 avrRpm1 0.56 >More info 0.64 >More info 8h-DC3000 leaves Original data GEO bulk
32 rosette Light Wounded 0.60 >More info 0.60 >More info rosette Light Control Original data GEO bulk
33 Col-0 DCA 6d 0.50 >More info 0.69 >More info Col-0 MOCK 6d Original data GEO bulk
34 Col-0 9 hpi A. brassicicola 0.60 >More info 0.59 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
35 Flagellin 4 h (leaf) 0.63 >More info 0.56 >More info Mock 4 h (leaf) Original data Elicitor treatments
36 Atss3 Light1 -0.56 >More info -0.62 >More info Atss3 Dark0.5 Original data GEO bulk
37 12h-DC3000 avrRpm1 0.55 >More info 0.62 >More info 12h-DC3000 leaves Original data GEO bulk
38 WT cold 0.64 >More info 0.53 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
39 Col-0 under 4 days salt 0.68 >More info 0.48 >More info Col-0 under control 4 days salt treatment rosette Original data
40 petiole in FRD 0.52 >More info 0.64 >More info petiole in WL petioles Original data GEO bulk
41 petiole in D 0.51 >More info 0.65 >More info petiole in WL petioles Original data GEO bulk
42 low CO2 + dark 0.64 >More info 0.52 >More info normal CO2 + light Original data GEO bulk
43 wt systemic wounding 0.62 >More info 0.54 >More info wt control leaves Original data GEO bulk
44 gh3.5-1D 48 hpi 0.70 >More info 0.46 >More info Col-0 uninoculated Original data GEO bulk
45 mkk1/mkk2 24h BTH rep 0.69 >More info 0.46 >More info Col-0 24h BTH rep Original data GEO bulk
46 leaf blade in FRD 0.53 >More info 0.62 >More info leaf blade in WL leaf blades Original data GEO bulk
47 flu over-tAPX 0.59 >More info 0.56 >More info WT Col Original data GEO bulk
48 ORS1 induced 0.49 >More info 0.66 >More info mock-induced rosette leaves Original data GEO bulk
49 M6PR transgenic 0mM NaCl 0.56 >More info 0.58 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
50 pnp1-1 3h +P 0.68 >More info 0.46 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
51 WT hypoxia 0.52 >More info 0.62 >More info WT normoxia whole rosette Original data
52 ERF96OE 0.62 >More info 0.52 >More info WT leaf Original data
53 aerial organ callus inducing medium 24h 0.64 >More info 0.50 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
54 CMV-WT 0.70 >More info 0.44 >More info Mock-At Aerial tissues Original data GEO bulk
55 Dex-rga(delta17) 4h GA4 -0.45 >More info -0.69 >More info Vector 4h GA4 shoots Original data GEO bulk
56 Col(gl) leaf 0mM NaCl 0.46 >More info 0.67 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
57 Col(gl) 0mM NaCl 0.46 >More info 0.67 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
58 CBF3 0mM NaCl 0.51 >More info 0.62 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
59 cpr5scv1 0.59 >More info 0.54 >More info WT(COL) Original data GEO bulk
60 Rsch 3d 0.52 >More info 0.61 >More info Rsch CA Leaves Original data
61 anti-sense for AtAOX1a 0.52 >More info 0.61 >More info WT Original data GEO bulk
62 Cold Stress 24 h (shoot) 0.60 >More info 0.53 >More info Stress mock 24 h (shoot) Original data Stress treatments
63 sid2-2 9 hpi A. brassicicola 0.59 >More info 0.54 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
64 ceh1 mutant 0.58 >More info 0.54 >More info Parent line Original data
65 Te 3d 0.51 >More info 0.61 >More info Te CA Leaves Original data
66 sfr2 control -0.55 >More info -0.57 >More info WT control All aerial tissue Original data GEO bulk
67 aerial organ callus inducing medium 96 h 0.67 >More info 0.44 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
68 ice1 control 0.60 >More info 0.51 >More info WT control Original data GEO bulk
69 MYB12OX/tt4 0.52 >More info 0.59 >More info Col-0 aerial part Original data
70 1 h Light IP RNA -0.53 >More info -0.57 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
71 pap1-D/tt4 0.60 >More info 0.50 >More info Col-0 aerial part Original data
72 Col0-PsmES4326-24hpi 0.49 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
73 SA 4mM 0.46 >More info 0.63 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
74 AFB1 0h 0.56 >More info 0.52 >More info Col 0h Leaf Original data GEO bulk
75 rosette Dark Wounded 0.63 >More info 0.45 >More info rosette Dark Control Original data GEO bulk
76 flu 0.61 >More info 0.47 >More info WT Col Original data GEO bulk
77 AvrRpt2 Col-0 6hpi 0.77 >More info 0.31 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
78 Shoot dark control 7h 0.56 >More info 0.52 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
79 cpr5npr1svi1 0.53 >More info 0.55 >More info WT(COL) Original data GEO bulk
80 WT 3H Cold 0.43 >More info 0.65 >More info WT control Original data GEO bulk
81 ga1-3 1h GA4 -0.62 >More info -0.45 >More info ga1-3 1h water shoots Original data GEO bulk
82 WT 2-4h Xanthomonas 0.41 >More info 0.66 >More info WT T0 Original data GEO bulk
83 cpr5npr1 0.57 >More info 0.50 >More info WT(COL) Original data GEO bulk
84 GST NPP1 4 h (leaf) 0.54 >More info 0.52 >More info Mock 4 h (leaf) Original data Elicitor treatments
85 Col-0 48 hpi 0.57 >More info 0.49 >More info Col-0 uninoculated Original data GEO bulk
86 anac017-2 AntimycinA 3h -0.60 >More info -0.46 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
87 Osmotic Stress 24 h (shoot) 0.61 >More info 0.44 >More info Stress mock 24 h (shoot) Original data Stress treatments
88 SOS1 0mM NaCl 0.59 >More info 0.46 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
89 Cd 24h root -0.68 >More info -0.37 >More info WT-Untreated Shoot Original data GEO bulk
90 ice1 6H Cold 0.49 >More info 0.56 >More info WT 6H Cold Original data GEO bulk
91 ASL9-ox -0.69 >More info -0.36 >More info WT aerial parts of seedlings Original data GEO bulk
92 Nicotinamide-69hr 0.47 >More info 0.58 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
93 vte2-1 3d vernalization 0.55 >More info 0.49 >More info WT 3d vernalization Original data GEO bulk
94 vte2 leaves 0h LT -0.58 >More info -0.46 >More info Col leaves 0h LT h 9-11th adult leaves Original data
95 shoots bhlh100/101 0uM Fe 0.66 >More info 0.37 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
96 cpr5 0.60 >More info 0.43 >More info WT(COL) Original data GEO bulk
97 bHLH122 ox -0.54 >More info -0.49 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
98 TNT-seedlings 0.38 >More info 0.65 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
99 del1-1 mutant 5d uninfected 0.45 >More info 0.58 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
100 pmr5 pmr6 0.56 >More info 0.46 >More info Col-0 Original data GEO bulk
101 ein2-1 9 hpi A. brassicicola 0.51 >More info 0.51 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
102 ataf1-1 mutant Col-0 Bgh inoculated 0.52 >More info 0.50 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
103 Pseudomonas 0.47 >More info 0.55 >More info Control pseudomonas treated whole seedling Original data GEO bulk
104 cat2-2; 8h switch to ambient CO2 concentrations; 0.50 >More info 0.51 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
105 WT Seedling BL+ABA 0.69 >More info 0.32 >More info WT Seedling BL Original data GEO bulk
106 seedlings protease IV 0.51 >More info 0.50 >More info seedlings nontreated control whole seedling Original data
107 low CO2 + light 0.53 >More info 0.48 >More info normal CO2 + light Original data GEO bulk
108 pepr1-1 Pepr2-3 +Pep2 2h -0.51 >More info -0.50 >More info WT +Pep2 2h Pep2 Original data GEO bulk
109 Nicotinamide-65hr 0.52 >More info 0.49 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
110 Col-0 C2H4 24h 0.54 >More info 0.47 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
111 Chitosan 3h Treatment 0.53 >More info 0.48 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
112 Rsch 1d 0.45 >More info 0.56 >More info Rsch CA Leaves Original data
113 Nicotinamide-49hr 0.51 >More info 0.49 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
114 sid2-avrB-6h 0.50 >More info 0.50 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
115 Wounding Stress3 h (shoot) 0.50 >More info 0.50 >More info Stress mock 3 h (shoot) Original data Stress treatments
116 Nicotinamide-73hr 0.44 >More info 0.56 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
117 WT 6H Cold 0.41 >More info 0.59 >More info WT control Original data GEO bulk
118 E.coli TUV86 2 fliC 7h 0.44 >More info 0.56 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
119 Col BTH 0.33 >More info 0.67 >More info Col rosettes Original data GEO bulk
120 Elevated CO2 AMPLE N NIGHT 0.46 >More info 0.54 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
121 Salt Stress 24 h (shoot) 0.66 >More info 0.33 >More info Stress mock 24 h (shoot) Original data Stress treatments
122 Shoot dark control 24h 0.51 >More info 0.48 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
123 Myzus persicae saliva 0.51 >More info 0.48 >More info Control Original data GEO bulk
124 aphid saliva treated 0.51 >More info 0.48 >More info control aphid saliva treated leaves Original data GEO bulk
125 Te ozone 0.66 >More info 0.33 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
126 ice1 24H Cold 0.48 >More info 0.51 >More info WT 24H Cold Original data GEO bulk
127 col-5 hrpA 12h 0.47 >More info 0.52 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
128 ein5-1 ski2-3 0.55 >More info 0.43 >More info Col-0 aerial tissue Original data
129 root protophloem 40 mM NaCl 0.52 >More info 0.46 >More info root protophloem Original data GEO bulk
130 30m light -0.26 >More info -0.72 >More info before light whole seedlings Original data GEO bulk
131 ckh2 CK25 0.42 >More info 0.56 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
132 shoot-10 μM DEX- 12 hr 0.41 >More info 0.57 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
133 A2hsfa1-ox in quadruple mutant -0.53 >More info -0.44 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
134 Pst-DC3000(avrRpm1)-4hpi 0.50 >More info 0.47 >More info Pst-DC3000-4hpi Original data GEO bulk
135 frb1 mutant 0.54 >More info 0.43 >More info WT whole seedling Original data GEO bulk
136 D2O 0.57 >More info 0.40 >More info H2O seedling Original data GEO bulk
137 Col in Pi deficiency medium 0.28 >More info 0.68 >More info Col in control medium root Original data GEO bulk
138 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.60 >More info 0.36 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
139 Elevated CO2 AMPLE N DAY 0.60 >More info 0.36 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
140 sfr6 control -0.52 >More info -0.44 >More info WT control All aerial tissue Original data GEO bulk
141 gun1gun5 far-red pretreated -0.59 >More info -0.37 >More info WT far-red pretreated Original data GEO bulk
142 ARR22-ox (t-zeatin 3 h) 0.64 >More info 0.32 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
143 Col 3d 0.44 >More info 0.52 >More info Col CA Leaves Original data
144 WT 3h -P 0.56 >More info 0.39 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
145 CT101 ozone 0.60 >More info 0.35 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
146 FOX line K16331 0.61 >More info 0.34 >More info empty vector control (T3) FOX lines Original data GEO bulk
147 Dark 6h hml 0.62 >More info 0.33 >More info 0h hml Original data
148 anac017-2 H2O2 3h -0.60 >More info -0.35 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
149 Dark 6h wt 0.62 >More info 0.33 >More info 0h wt Original data
150 fls1-3 0.38 >More info 0.56 >More info Col-0 Rosette leaves Original data
151 WT Bc inoculation 14h 0.57 >More info 0.37 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
152 Mutant gh3.5-1D (AvrRpt2) 0.57 >More info 0.37 >More info Col-0 (AvrRpt2) Original data GEO bulk
153 Col-0 ozone 0.59 >More info 0.35 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
154 edr1 36 h powdery mildew 0.50 >More info 0.44 >More info Col-0 36 h powdery mildew Original data GEO bulk
155 4C 2h(SOIL) 0.23 >More info 0.71 >More info 4C 0h(SOIL) Original data GEO bulk
156 ice1 3H Cold 0.51 >More info 0.42 >More info WT 3H Cold Original data GEO bulk
157 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.59 >More info 0.34 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
158 35S:RPS4 eds1-2 24h -0.57 >More info -0.36 >More info 35S:RPS4 24h leaves Original data
159 abi4 vtc2 (I) 0.52 >More info 0.41 >More info Col (I) rosette Original data GEO bulk
160 OsRLCK253 expressing -0.30 >More info -0.63 >More info WT seedlings Original data GEO bulk
161 4C 24h(SOIL) 0.55 >More info 0.37 >More info 4C 0h(SOIL) Original data GEO bulk
162 1 h Light Total RNA -0.38 >More info -0.54 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
163 gpa1-4/agb1-2 ozone 2d -0.39 >More info -0.53 >More info Col ozone 2d ozone Original data GEO bulk
164 seedlings-week-old RECA1-overexpressing
transgenic		 0.39 >More info 0.53 >More info seedlings-week-old Col-0 seedlings Original data
165 camta1 leaf water 0.50 >More info 0.42 >More info Col-0 leaf water leaf Original data GEO bulk
166 WT AntimycinA 3h 0.57 >More info 0.35 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
167 S58-2 0.54 >More info 0.37 >More info wt Original data GEO bulk
168 cop1 Seedling BL 0.52 >More info 0.39 >More info WT Seedling BL Original data GEO bulk
169 6h +Pi -0.51 >More info -0.40 >More info 6h -Pi root Original data GEO bulk
170 camta1-2 0.37 >More info 0.54 >More info Col-0-WT Original data GEO bulk
171 4C 7d(SOIL) 0.57 >More info 0.34 >More info 4C 0h(SOIL) Original data GEO bulk
172 tunicamycin -0.34 >More info -0.56 >More info DMF Original data GEO bulk
173 WOX1-1 0.38 >More info 0.52 >More info Col-0 aerial part Original data
174 Te 8h 0.37 >More info 0.53 >More info Te CA Leaves Original data
175 Dark 2day hml 0.58 >More info 0.32 >More info 0h hml Original data
176 Dark 3day ivd 0.56 >More info 0.33 >More info 0h ivd Original data
177 hsfa1 quadruple mutant 0.55 >More info 0.34 >More info WT (Col-0) whole seedling Original data GEO bulk
178 cdkf:1-2 0.54 >More info 0.35 >More info wt seedling young seedlings Original data GEO bulk
179 Nicotinamide-89hr 0.50 >More info 0.39 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
180 mkk1/mkk2 control rep 0.50 >More info 0.39 >More info Col-0 Time 0 rep Original data GEO bulk
181 siliques AtHb1 control 0.37 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
182 aba3-1 0.39 >More info 0.50 >More info wt Original data GEO bulk
183 E.coli 0157 H7 7h 0.32 >More info 0.57 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
184 pnp1-1 1wk +P 0.53 >More info 0.35 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
185 coi1-16 ein2 sid2 ctrl -0.50 >More info -0.38 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
186 4d red light grown hmr-5 seedlings 0.53 >More info 0.34 >More info 4d red light grown WT(Col-0) seedlings Original data
187 Leaf GLU1-KO 0.51 >More info 0.36 >More info Leaf Col(0) rosette leaves Original data GEO bulk
188 upf3 0.52 >More info 0.35 >More info WT whole plant Original data GEO bulk
189 Rsch 8h 0.29 >More info 0.58 >More info Rsch CA Leaves Original data
190 Col-0 flu HL 3h 0.53 >More info 0.33 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
191 Col-0 +lincomycin 0.34 >More info 0.52 >More info Col-0 -lincomycin Original data GEO bulk
192 shl-2 Pool 0.30 >More info 0.56 >More info Ler Pool seedling Original data GEO bulk
193 npr1 sni1 SA 0.51 >More info 0.35 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
194 Laer pretreat GA Flg22 1h 0.15 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
195 Col ozone 3h 0.26 >More info 0.60 >More info Col clean-air 3h ozone Original data GEO bulk
196 Dark 3day hml 0.52 >More info 0.33 >More info 0h hml Original data
197 dor drought 0.54 >More info 0.31 >More info WT drought Original data GEO bulk
198 atmospheric CO2 low Mg shoot 0.51 >More info 0.34 >More info atmospheric CO2 normal Mg shoot Shoot Original data
199 4C 1h 0.15 >More info 0.70 >More info 4C 0h Original data GEO bulk
200 Dark 2day wt 0.52 >More info 0.32 >More info 0h wt Original data
201 hrpA 7h 0.33 >More info 0.51 >More info Mock 7h hrpA Original data GEO bulk
202 sta1 0.53 >More info 0.30 >More info WT Original data GEO bulk
203 SLWF infested 0.50 >More info 0.33 >More info SLWF uninfested rosette tissue Original data GEO bulk
204 hsfa1 quadruple mutant heat shock 0.57 >More info 0.26 >More info WT (Col-0) heat shock whole seedling Original data GEO bulk
205 IMI 4mM 0.58 >More info 0.25 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
206 mkk2 24h BTH rep 0.22 >More info 0.61 >More info Col-0 24h BTH rep Original data GEO bulk
207 root stele 40 mM NaCls 0.55 >More info 0.27 >More info root stele Original data GEO bulk
208 Col-0-3h IAA 0.54 >More info 0.28 >More info Col-0-0h IAA whole plant Original data GEO bulk
209 Total RNA csp1 cold 0.29 >More info 0.53 >More info Total RNA csp1 12h cold (4C) rosettes Original data GEO bulk
210 PRR5-VP 12h light on -0.52 >More info -0.29 >More info WT 12h light on whole plant Original data GEO bulk
211 scrm-D:mute 0.55 >More info 0.26 >More info Col-0 WT whole seedling Original data GEO bulk
212 60m light -0.15 >More info -0.66 >More info before light whole seedlings Original data GEO bulk
213 seed germinating in countinuous light 24h SL 0.14 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
214 RPL18 TuMV inoculated total RNA 0.50 >More info 0.30 >More info mock inoculated total RNA PO Original data GEO bulk
215 nia1nia2 0.51 >More info 0.29 >More info Col-0 whole seedlings Original data GEO bulk
216 CLO 4mM 0.56 >More info 0.23 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
217 Mutant iaa17-6 (IAA) 0.52 >More info 0.26 >More info Col (IAA) Original data GEO bulk
218 Col-0 drought 0.53 >More info 0.25 >More info Col-0 control Original data GEO bulk
219 vte2-1 1d vernalization 0.28 >More info 0.50 >More info WT 1d vernalization Original data GEO bulk
220 NAA -AA 0.55 >More info 0.22 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
221 exo70A1 0.53 >More info 0.24 >More info Col-0 whole plant Original data GEO bulk
222 opr3 JA 0.5 h 0.14 >More info 0.63 >More info opr3 0 h Original data GEO bulk
223 Dex-rga(delta17) 2h GA4 -0.25 >More info -0.52 >More info Vector 4h GA4 shoots Original data GEO bulk
224 Col-0 Mock Shade 0.53 >More info 0.23 >More info Col-0 Mock WL seedlings Original data
225 vte2 leaves 48h LT 0.55 >More info 0.21 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
226 Got7 UV 0.22 >More info 0.54 >More info Got7 mock UV seedling Original data
227 IXB induced 0.23 >More info 0.53 >More info Methanol IXB Suspension cells Original data GEO bulk
228 Col-O high light 0.53 >More info 0.22 >More info Col-O bule light Original data GEO bulk
229 6h volatiles Sm. R3089 0.09 >More info 0.66 >More info 6h untreated whole seedling Original data GEO bulk
230 Dry midnight -0.53 >More info -0.21 >More info Wet midnight water-limited whole rosette Original data GEO bulk
231 AVG 3 h -0.24 >More info -0.50 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
232 npr1-3 MOCK 48h -0.11 >More info -0.63 >More info Col-0 MOCK 48h Original data GEO bulk
233 WT Na2S -0.20 >More info -0.54 >More info WT water Na2S leaf Original data GEO bulk
234 FLIGHT TAGESB plate6 ROOTS 0.16 >More info 0.58 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
235 shoots WT 0uM Fe 0.52 >More info 0.21 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
236 FarRed Light 45min 0.07 >More info 0.66 >More info White Light 45min Original data Light treatments
237 TA induced 0.14 >More info 0.59 >More info Methanol TA Suspension cells Original data GEO bulk
238 bri1-116 0.00 >More info 0.73 >More info Col seedling Original data GEO bulk
239 iron minus 24h -0.16 >More info -0.56 >More info iron +24h root Original data GEO bulk
240 seedlings +5AC 0.51 >More info 0.21 >More info control seedlings 10-day old whole seedling Original data GEO bulk
241 myb61 xylem 0.15 >More info 0.57 >More info wt xylem xylem Original data GEO bulk
242 triploid female excess -0.08 >More info -0.64 >More info tetraploid Original data GEO bulk
243 Night Time Treatment -0.10 >More info -0.62 >More info Night Time Control 1hr white light pulse aerial rosette Original data
244 3x(p) 0.13 >More info 0.59 >More info 2x two week old seedlings Original data
245 DUO1 induced 6h -0.67 >More info -0.04 >More info 6hr-not-induced whole plant Original data GEO bulk
246 35S:RPS4 rrs1-11 2h 0.52 >More info 0.19 >More info 35S:RPS4 2h leaves Original data
247 seedling 24h after Gamma atm-1 -0.21 >More info -0.50 >More info seedling day 2 unirradiated atm-1 24h Original data
248 opr3 OPDA 2 h 0.18 >More info 0.52 >More info opr3 0 h Original data GEO bulk
249 oas-a1.1 root -0.13 >More info -0.55 >More info WT-Untreated Root Original data GEO bulk
250 JA 3h 0.16 >More info 0.52 >More info EtOH 3h 3hr Original data GEO bulk
251 Col-0 shade 0.14 >More info 0.54 >More info Col-0 light seedlings Original data GEO bulk
252 CCA1-ox 6am non-polysomal 0.17 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
253 FLIGHT TAGESB plate 0.54 >More info 0.13 >More info GROUND CONTROL TAGESB plate Original data
254 coi1 -0.03 >More info -0.64 >More info Col-0 Leaves Original data GEO bulk
255 wrky33 mock 0.52 >More info 0.14 >More info WT mock 14 hour mock control leaves Original data
256 short 10-degree- 0.56 >More info 0.09 >More info control short Original data GEO bulk
257 Col-0-1h IAA 0.50 >More info 0.15 >More info Col-0-0h IAA whole plant Original data GEO bulk
258 Imbibed 1 h (seed) 0.03 >More info 0.62 >More info Dry seed Original data Time course of early seed germination
259 WT zebularine 5d -0.53 >More info -0.11 >More info WT mock 5d shoot apical meristem Original data
260 nhx6 0.54 >More info 0.10 >More info WT Rosette leaf Original data GEO bulk
261 myb61 cork 0.10 >More info 0.54 >More info wt cork cork Original data GEO bulk
262 35:SUB1A 0.54 >More info 0.09 >More info WT whole seedling Original data GEO bulk
263 siliques WT hypoxia 0.60 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
264 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.51 >More info -0.09 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
265 Mutant lwd1_lwd2 0.08 >More info 0.52 >More info Wildtype for phy mutants Original data GEO bulk
266 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.08 >More info 0.52 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
267 root longitudinal zone-1 -Fe -0.09 >More info -0.50 >More info root longitudinal zone-1 standard Original data GEO bulk
268 HairpinZ 4 h (leaf) 0.61 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
269 Heat shock 20%Inhibition 0.50 >More info 0.07 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
270 low water potential 0.51 >More info 0.06 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
271 24h volatiles Sm. R3089 0.04 >More info 0.53 >More info 24h untreated whole seedling Original data GEO bulk
272 pvip1 pvip2 seedling 0.59 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
273 Root wt CLE10 -0.01 >More info 0.58 >More info Root wt CLE25 root tip Original data GEO bulk
274 Mutant cry1 (High Light) -0.66 >More info 0.11 >More info Col-0 (High Light) Original data GEO bulk
275 Dark 2day ivd 0.56 >More info -0.01 >More info 0h ivd Original data
276 cry1 high light -0.66 >More info 0.11 >More info Col-O high light Original data GEO bulk
277 Shoot submergence 7h 0.54 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
278 Al treated -0.00 >More info 0.54 >More info control Original data GEO bulk
279 Col-0 24hpi A. brassicicola 0.51 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
280 IAA 0.5 h -0.01 >More info 0.54 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
281 P.syringae AvrRpt2 4 h (leaf) 0.58 >More info -0.05 >More info Mock 4 h (leaf) Original data Elicitor treatments
282 IAA7mII over-expressor IAA Treated -0.16 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
283 35S-MIF1 light grown 0.51 >More info 0.01 >More info Light-grown WT control Original data GEO bulk
284 tetraploid -0.07 >More info 0.56 >More info diploid Original data GEO bulk
285 Red/FR Light45min 0.03 >More info -0.52 >More info FarRed Light 45min Original data Light treatments
286 Constans-mutant 0.55 >More info -0.07 >More info Col control above-ground whole plant Original data GEO bulk
287 3x(m) -0.16 >More info 0.64 >More info 2x two week old seedlings Original data
288 downy mildew cotyledons late stage 0.57 >More info -0.10 >More info mock inoculated Cotyledons Original data GEO bulk
289 CeO2 germinant 0.10 >More info -0.54 >More info Millipore Water germinant CeO2 seedling Original data
290 P. infestans 6 h (leaf) 0.59 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
291 Shoot apex inflorescence (after bolting) -0.23 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
292 Leaf wounded -0.15 >More info 0.52 >More info Leaf control vegetative leaf Original data GEO bulk
293 Polysomal RNA 35S:AtCSP1-FH1 -0.18 >More info 0.51 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk