4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Pseudomonas
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List of experiments correlated with "Pseudomonas"  Help Download transcriptome of top 30
Score Experiment Correlation from
Pseudomonas		 Correlation to
Pseudomonas		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Pseudomonas 1.00 >More info 1.00 >More info Control pseudomonas treated whole seedling Original data GEO bulk
2 sid2 0.89 >More info 0.82 >More info Col rosettes Original data GEO bulk
3 mil4 sid2 0.87 >More info 0.80 >More info Col rosettes Original data GEO bulk
4 mil4 0.86 >More info 0.79 >More info Col rosettes Original data GEO bulk
5 MYB12OX/tt4 0.83 >More info 0.80 >More info Col-0 aerial part Original data
6 Shoot dark control 7h 0.83 >More info 0.79 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
7 Shoot dark control 24h 0.82 >More info 0.77 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
8 pap1-D/tt4 0.83 >More info 0.76 >More info Col-0 aerial part Original data
9 WOX1-1 0.84 >More info 0.74 >More info Col-0 aerial part Original data
10 tt4 0.81 >More info 0.77 >More info Col-0 aerial part Original data
11 MIL4 ox 0.82 >More info 0.72 >More info Col Original data GEO bulk
12 Day Time Treatment -0.78 >More info -0.74 >More info Day Time Control 1hr white light pulse aerial rosette Original data
13 Shoot submergence 24h 0.80 >More info 0.72 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
14 low CO2 + dark 0.74 >More info 0.74 >More info normal CO2 + light Original data GEO bulk
15 M6PR transgenic leaf 0mM NaCl 0.76 >More info 0.72 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
16 12h volatiles Sm. R3089 0.72 >More info 0.75 >More info 12h untreated whole seedling Original data GEO bulk
17 WT hypoxia 0.77 >More info 0.69 >More info WT normoxia whole rosette Original data
18 6h volatiles Sm. R3089 0.69 >More info 0.77 >More info 6h untreated whole seedling Original data GEO bulk
19 seedling 1.5h after HZE atm-1 0.74 >More info 0.72 >More info seedling day 1 unirradiated atm-1 1.5h Original data
20 shl-2 Pool 0.73 >More info 0.72 >More info Ler Pool seedling Original data GEO bulk
21 leaf blade in D 0.73 >More info 0.68 >More info leaf blade in WL leaf blades Original data GEO bulk
22 Night Time Treatment -0.74 >More info -0.66 >More info Night Time Control 1hr white light pulse aerial rosette Original data
23 Atss3 Light4 -0.71 >More info -0.68 >More info Atss3 Dark0.5 Original data GEO bulk
24 pap1-D 0.79 >More info 0.60 >More info Col-0 aerial part Original data
25 Col(gl) 0mM NaCl 0.71 >More info 0.67 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
26 WT (Col) glucose -0.69 >More info -0.69 >More info WT (Col) glucose seedlings Original data GEO bulk
27 TaFLS overexpression line (OE2) 0.72 >More info 0.66 >More info Col-0 Rosette leaves Original data
28 Col(gl) leaf 0mM NaCl 0.71 >More info 0.67 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
29 mkk2 control rep 0.68 >More info 0.70 >More info Col-0 Time 0 rep Original data GEO bulk
30 petiole in D 0.71 >More info 0.65 >More info petiole in WL petioles Original data GEO bulk
31 camta1-2 0.61 >More info 0.74 >More info Col-0-WT Original data GEO bulk
32 Col(gl) leaf 100mM NaCl 0.76 >More info 0.58 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
33 1 h Light Total RNA -0.72 >More info -0.62 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
34 Col(gl) 100mM NaCl 0.76 >More info 0.58 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
35 mutant acs2C (single mutant) 0.76 >More info 0.57 >More info col control (single mutant) Original data GEO bulk
36 seedling 1.5h after HZE WT 0.71 >More info 0.62 >More info seedling day 1 unirradiated WT 1.5h Original data
37 mutant acs9B (single mutant) 0.77 >More info 0.55 >More info col control (single mutant) Original data GEO bulk
38 Nicotinamide-73hr 0.68 >More info 0.64 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
39 sex1-3 0.63 >More info 0.69 >More info Col-WT leaves Original data GEO bulk
40 Dark 6h ivd 0.71 >More info 0.61 >More info 0h ivd Original data
41 leaf blade in FRD 0.70 >More info 0.61 >More info leaf blade in WL leaf blades Original data GEO bulk
42 Dark 1day hml 0.77 >More info 0.53 >More info 0h hml Original data
43 Col-0 DEX Shade 0.74 >More info 0.56 >More info Col-0 DEX WL seedlings Original data
44 Root submergence 7h 0.66 >More info 0.64 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
45 Col BTH 0.62 >More info 0.67 >More info Col rosettes Original data GEO bulk
46 Root dark control 7h 0.66 >More info 0.63 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
47 seedling 24h after Gamma WT -0.64 >More info -0.65 >More info seedling day 2 unirradiated WT 24h Original data
48 seedling 24h after Gamma atm-1 -0.62 >More info -0.67 >More info seedling day 2 unirradiated atm-1 24h Original data
49 Dark 1day ivd 0.77 >More info 0.51 >More info 0h ivd Original data
50 Col-0 C2H4 24h 0.70 >More info 0.58 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
51 petiole in FRD 0.67 >More info 0.60 >More info petiole in WL petioles Original data GEO bulk
52 Dark 6h hml 0.76 >More info 0.49 >More info 0h hml Original data
53 60m light -0.57 >More info -0.68 >More info before light whole seedlings Original data GEO bulk
54 mkk2 24h BTH rep 0.69 >More info 0.55 >More info Col-0 24h BTH rep Original data GEO bulk
55 Col-0 WT HL 3h -0.64 >More info -0.60 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
56 M6PR transgenic 0mM NaCl 0.70 >More info 0.54 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
57 fls1-3 0.69 >More info 0.55 >More info Col-0 Rosette leaves Original data
58 det2 light-dark 0.76 >More info 0.48 >More info det2 light light-dark Original data GEO bulk
59 Dark 1day wt 0.75 >More info 0.49 >More info 0h wt Original data
60 4d red light grown hmr-5 seedlings 0.65 >More info 0.59 >More info 4d red light grown WT(Col-0) seedlings Original data
61 mil4 BTH 0.72 >More info 0.51 >More info Col BTH rosettes Original data GEO bulk
62 Root submergence 24h 0.62 >More info 0.61 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
63 Cd 18h root -0.65 >More info -0.57 >More info WT-Untreated Root Original data GEO bulk
64 Root dark control 24h 0.62 >More info 0.60 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
65 Dark 6h wt 0.73 >More info 0.49 >More info 0h wt Original data
66 arr10 arr12 -0.72 >More info -0.49 >More info WT Original data GEO bulk
67 Cocultivation 8 hrs leaf 0.68 >More info 0.52 >More info Mock cocultivation 8 hrs leaf Leaf Original data
68 Heat shock optimum 0.55 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
69 Dark 3day hml 0.73 >More info 0.47 >More info 0h hml Original data
70 Nicotinamide-69hr 0.63 >More info 0.57 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
71 Nicotinamide-93hr 0.64 >More info 0.55 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
72 Dark 2day wt 0.73 >More info 0.46 >More info 0h wt Original data
73 1 h Light IP RNA -0.64 >More info -0.54 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
74 04h Col-0 -0.63 >More info -0.55 >More info 00h Col-0 Original data GEO bulk
75 mkk1 24h BTH rep 0.67 >More info 0.51 >More info Col-0 24h BTH rep Original data GEO bulk
76 Dark 3day wt 0.71 >More info 0.47 >More info 0h wt Original data
77 WT cold -0.61 >More info -0.57 >More info WT control All aerial tissue Original data GEO bulk
78 root - 01% oxygen - 2h 0.46 >More info 0.72 >More info root - 21% oxygen - 2h Original data GEO bulk
79 Atss3 Light1 -0.55 >More info -0.62 >More info Atss3 Dark0.5 Original data GEO bulk
80 Dark 3day ivd 0.71 >More info 0.46 >More info 0h ivd Original data
81 detached inflorescences 24h 0.66 >More info 0.51 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
82 sfr6 control -0.73 >More info -0.44 >More info WT control All aerial tissue Original data GEO bulk
83 oas-a1.1 root -0.55 >More info -0.62 >More info WT-Untreated Root Original data GEO bulk
84 Nicotinamide-49hr 0.64 >More info 0.52 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
85 Col-0 low oxygen 0.64 >More info 0.52 >More info Col-0 Original data GEO bulk
86 Seedling-HeatStressed TOTALmRNA 0.60 >More info 0.56 >More info Seedling-control TOTALmRNA seedling Original data
87 Mutant lwd1_lwd2 0.44 >More info 0.72 >More info Wildtype for phy mutants Original data GEO bulk
88 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.44 >More info 0.72 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
89 low CO2 + light 0.62 >More info 0.53 >More info normal CO2 + light Original data GEO bulk
90 Dark 2day hml 0.71 >More info 0.44 >More info 0h hml Original data
91 COL-0-Fe--shoot -0.74 >More info -0.41 >More info COL-0-Ctrl--shoot shoot Original data
92 WT-Dry -0.62 >More info -0.52 >More info WT-CK dehydration treatment 1h Original data
93 phyABDE Rc50 -0.59 >More info -0.55 >More info phyABDE Dark red light whole seedling Original data GEO bulk
94 24h volatiles Sm. R3089 0.52 >More info 0.62 >More info 24h untreated whole seedling Original data GEO bulk
95 ebs Pool 0.69 >More info 0.44 >More info Ler Pool seedling Original data GEO bulk
96 30m light -0.49 >More info -0.64 >More info before light whole seedlings Original data GEO bulk
97 pGL1::GL1-GR Dex 24hours 0.58 >More info 0.54 >More info pGL1::GL1-GR mock 24hours Original data GEO bulk
98 PRR5-VP 12h light on -0.50 >More info -0.62 >More info WT 12h light on whole plant Original data GEO bulk
99 Whole root - S 3H -0.62 >More info -0.50 >More info Whole root - S 0H Original data GEO bulk
100 sfr2 control -0.80 >More info -0.32 >More info WT control All aerial tissue Original data GEO bulk
101 AmGSTF1 expressor 0.55 >More info 0.56 >More info WT leaf tissue Original data GEO bulk
102 mbd4 mutant thaliana 10-day-old seedling 0.62 >More info 0.49 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
103 ga1-3 scl3-1 -0.64 >More info -0.46 >More info ga1-3 whole root Original data
104 Col-0 +lincomycin 0.59 >More info 0.51 >More info Col-0 -lincomycin Original data GEO bulk
105 Light 4h steady-state -0.63 >More info -0.47 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
106 camta1 leaf water 0.58 >More info 0.52 >More info Col-0 leaf water leaf Original data GEO bulk
107 ptpks2 -0.33 >More info -0.77 >More info Col-WT leaves Original data GEO bulk
108 WT Root Hypoxia 0.40 >More info 0.70 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
109 mkk1/mkk2 24h BTH rep 0.63 >More info 0.46 >More info Col-0 24h BTH rep Original data GEO bulk
110 CBF3 0mM NaCl 0.62 >More info 0.47 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
111 aerial organ callus inducing medium 12 h 0.52 >More info 0.57 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
112 gun5 norflurazon 0.61 >More info 0.48 >More info gun5 control Original data GEO bulk
113 Whole root - S 12H -0.58 >More info -0.51 >More info Whole root - S 0H Original data GEO bulk
114 Seedling-HeatStressed POLYSOMESmRNA 0.59 >More info 0.49 >More info Seedling-control POLYSOMESmRNA seedling Original data
115 MYB12OX 0.68 >More info 0.40 >More info Col-0 aerial part Original data
116 tmm1-inflorescence-tips -0.49 >More info -0.59 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
117 Light 4h polysome-bound -0.63 >More info -0.44 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
118 mkk1/mkk2 control rep 0.63 >More info 0.44 >More info Col-0 Time 0 rep Original data GEO bulk
119 Laer pretreat GA Flg22 1h 0.36 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
120 max3GR24 (1 uM) -0.57 >More info -0.49 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
121 essp3/brm5 mutant -0.62 >More info -0.44 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
122 green tissue gl3 egl3 0.67 >More info 0.39 >More info green tissue WT L. er Original data GEO bulk
123 E.orontii Infection 3 day 0.53 >More info 0.52 >More info Uninfection 3 day Original data Elicitor treatments
124 mutant acs1A (single mutant) 0.73 >More info 0.32 >More info col control (single mutant) Original data GEO bulk
125 IRP1-OE-Ctrl--shoot -0.74 >More info -0.31 >More info COL-0-Ctrl--shoot shoot Original data
126 Col0-PsmES4326-24hpi 0.44 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
127 E.orontii Infection 6 h 0.56 >More info 0.48 >More info Uninfection 6 h Original data Elicitor treatments
128 OsRLCK253 expressing -0.54 >More info -0.50 >More info WT seedlings Original data GEO bulk
129 exo70A1 0.63 >More info 0.41 >More info Col-0 whole plant Original data GEO bulk
130 35S:GIF 0.65 >More info 0.39 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
131 seedling mSPL13 0.60 >More info 0.44 >More info seedling Col-0 Original data GEO bulk
132 sfr3 control -0.58 >More info -0.45 >More info WT control All aerial tissue Original data GEO bulk
133 Dark 4 h pls UV-AB 5min -0.57 >More info -0.46 >More info Dark 4 h Original data Light treatments
134 Nicotinamide-77hr 0.55 >More info 0.47 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
135 35S::MBF1c 0.54 >More info 0.48 >More info control Original data GEO bulk
136 gun4-1 0.60 >More info 0.42 >More info WT Col-0 seedling Original data GEO bulk
137 aba2 1% sucrose 12-day-old 0.62 >More info 0.40 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
138 rosette leaves lcr 0.55 >More info 0.47 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
139 WT Red light 18h -0.53 >More info -0.47 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
140 Col-0 Mock Shade 0.71 >More info 0.29 >More info Col-0 Mock WL seedlings Original data
141 mkk1 control rep 0.59 >More info 0.41 >More info Col-0 Time 0 rep Original data GEO bulk
142 24h light (+Lincomycin) 0.58 >More info 0.42 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
143 Red Light 4 h 0.42 >More info 0.58 >More info White Light 4 h Original data Light treatments
144 gapcp1gapcp2 -0.66 >More info -0.33 >More info WT Original data GEO bulk
145 phyB mutant 16C 10hrs -0.73 >More info -0.26 >More info 16C 10h whole plant excluding roots Original data GEO bulk
146 Col-0 norflurazon 0.62 >More info 0.37 >More info Col-0 control Original data GEO bulk
147 MIL4 ox BTH 0.58 >More info 0.41 >More info Col BTH Original data GEO bulk
148 WT drought -0.51 >More info -0.47 >More info WT control All aerial tissue Original data GEO bulk
149 sim smr1 0.62 >More info 0.36 >More info WT seedling Original data GEO bulk
150 Genotoxic Stress 3 h (shoot) -0.66 >More info -0.32 >More info Stress mock 3 h (shoot) Original data Stress treatments
151 toc1-1-77hr 0.39 >More info 0.59 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
152 essp4/sdg8-5 mutant -0.61 >More info -0.36 >More info wild type leaf Original data GEO bulk
153 gun1gun5 drak pretreated 0.56 >More info 0.41 >More info WT drak pretreated Original data GEO bulk
154 Mutant lfy-12(shoot apex) -0.53 >More info -0.44 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
155 sdg8-2 mutant -0.59 >More info -0.38 >More info wild type leaf Original data GEO bulk
156 ced1 -0.54 >More info -0.43 >More info WT PEG 6hr seedlings Original data GEO bulk
157 root - 04% oxygen - 2h 0.23 >More info 0.74 >More info root - 21% oxygen - 2h Original data GEO bulk
158 roottip hypoxia total 0.39 >More info 0.58 >More info roottip control total Original data GEO bulk
159 Aerobic prt6 0.40 >More info 0.57 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
160 0.2µM SMX -0.32 >More info -0.65 >More info control Whole seedling Original data GEO bulk
161 RGA-GR-DEX 0.57 >More info 0.39 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
162 Col leaf 100mM NaCl 0.52 >More info 0.43 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
163 Col leaf 100mM NaCl 0.52 >More info 0.43 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
164 Col 100mM NaCl 0.52 >More info 0.43 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
165 erf104-ko H2O 4h -0.60 >More info -0.35 >More info Col-0 H2O 4h Original data GEO bulk
166 Heat shock 20%Inhibition 0.52 >More info 0.43 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
167 PNO8 12 h 0.38 >More info 0.57 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
168 seedling SPL13 0.59 >More info 0.35 >More info seedling Col-0 Original data GEO bulk
169 Te 1d 0.52 >More info 0.42 >More info Te CA Leaves Original data
170 tumour 0.51 >More info 0.43 >More info non-tumor tumour Original data GEO bulk
171 Col-0 shade 0.52 >More info 0.42 >More info Col-0 light seedlings Original data GEO bulk
172 estradiole-induced ANAC059 -0.33 >More info -0.61 >More info transgenic (empty vector inducible system) Original data GEO bulk
173 WT salt 12 h -0.56 >More info -0.37 >More info WT salt 0 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
174 npr1 sni1 ssn2 -0.57 >More info -0.36 >More info npr1 sni1 water water seedling Original data GEO bulk
175 Nicotinamide-53hr 0.52 >More info 0.41 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
176 Rsch 3d 0.50 >More info 0.43 >More info Rsch CA Leaves Original data
177 gai Flg22 2h 0.52 >More info 0.41 >More info Laer Flg22 2h leaf discs Original data GEO bulk
178 seedlings by volatiles from leafminer damaged
Lima bean 48h		 -0.51 >More info -0.42 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
179 cpr5 sim smr1 0.63 >More info 0.30 >More info WT seedling Original data GEO bulk
180 rGRF3x35S:GIF 0.54 >More info 0.38 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
181 spch 0.54 >More info 0.38 >More info Col-0 WT whole seedling Original data GEO bulk
182 toc1-1-53hr 0.38 >More info 0.54 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
183 edr1 36 h powdery mildew 0.58 >More info 0.34 >More info Col-0 36 h powdery mildew Original data GEO bulk
184 Mutant ag-12(shoot apex) -0.50 >More info -0.42 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
185 WT (Col-0) inflorescence drought day 3 -0.59 >More info -0.33 >More info WT (Col-0) inflorescence well-watered day 3 Unopen flower buds Original data GEO bulk
186 csn3-1 dark -0.57 >More info -0.35 >More info WT dark Original data GEO bulk
187 elf3-7-16ºC -0.42 >More info -0.50 >More info WT-16ºC Original data GEO bulk
188 ANOXIA 0.42 >More info 0.50 >More info ANOXIA+SUCROSE Original data GEO bulk
189 toc1-1-89hr -0.39 >More info -0.52 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
190 cngc4 0.36 >More info 0.55 >More info Ws-2 Seedlings Original data GEO bulk
191 pnp1-1 3h +P 0.58 >More info 0.33 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
192 ADD3 -0.52 >More info -0.38 >More info WT aerial part Original data GEO bulk
193 AtLysM RLK1 mutant water -0.55 >More info -0.35 >More info WT water Original data GEO bulk
194 WT resupplied Pi 4h -0.51 >More info -0.39 >More info WT complete seedlings Original data
195 miR mutant (higher order mutant) 0.58 >More info 0.32 >More info col control (higher order mutant) Original data GEO bulk
196 6h volatiles Sp. HRO-C48 0.67 >More info 0.22 >More info 6h untreated whole seedling Original data GEO bulk
197 cpr5scv1 0.50 >More info 0.39 >More info WT(COL) Original data GEO bulk
198 hepta mutant (higher order mutant) 0.54 >More info 0.35 >More info col control (higher order mutant) Original data GEO bulk
199 aerial organ callus inducing medium 48 h 0.52 >More info 0.37 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
200 phr1 phl1 Shoot-Pi 0.57 >More info 0.32 >More info WT Shoot-Pi shoots Original data GEO bulk
201 FLIGHT TAGESB plate6 SHOOTS 0.54 >More info 0.34 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
202 Whole root - S 24H -0.53 >More info -0.35 >More info Whole root - S 0H Original data GEO bulk
203 CHLM overexpression -0.50 >More info -0.38 >More info Col-0 estr green tissue Original data GEO bulk
204 aerial organ callus inducing medium 96 h 0.52 >More info 0.36 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
205 short 17-degree- -0.11 >More info -0.77 >More info control short Original data GEO bulk
206 Dark 4 h pls RedLight 1min -0.57 >More info -0.31 >More info Dark 4 h Original data Light treatments
207 spx1 spx2 complete -0.54 >More info -0.33 >More info WT complete seedlings Original data
208 psad1-1 stn7-1 0.50 >More info 0.37 >More info Col-0 rosette leaves Original data GEO bulk
209 OsSAP11 expressing -0.52 >More info -0.35 >More info WT seedlings Original data GEO bulk
210 csn4-1 mutant -0.53 >More info -0.33 >More info WT dark Original data GEO bulk
211 Ws 100mM NaCl 0.51 >More info 0.35 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
212 Col-0 DCA 6d 0.64 >More info 0.22 >More info Col-0 MOCK 6d Original data GEO bulk
213 cpr5npr1 0.50 >More info 0.36 >More info WT(COL) Original data GEO bulk
214 Ws leaf 100mM NaCl 0.51 >More info 0.35 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
215 Nicotinamide-65hr 0.51 >More info 0.35 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
216 G3P -0.36 >More info -0.50 >More info Mock distal leaves Original data GEO bulk
217 csn5 (csn5a-2 csn5b) dark -0.54 >More info -0.31 >More info WT dark Original data GEO bulk
218 WT 1wk -P -0.54 >More info -0.31 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
219 light -0.67 >More info -0.18 >More info dark light seedling Original data GEO bulk
220 root hypoxia total 0.32 >More info 0.53 >More info root control total Original data GEO bulk
221 ein2 1% sucrose 14-day-old -0.61 >More info -0.24 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
222 ABA 3h -0.50 >More info -0.34 >More info EtOH 3h 3hr Original data GEO bulk
223 Leafminer damaged seedlings 0.28 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
224 UV Stress 24 h (shoot) 0.58 >More info 0.26 >More info Stress mock 24 h (shoot) Original data Stress treatments
225 vte1-1 3d vernalization -0.61 >More info -0.22 >More info WT 3d vernalization Original data GEO bulk
226 Whole root - S 48H -0.51 >More info -0.31 >More info Whole root - S 0H Original data GEO bulk
227 rGRF 0.53 >More info 0.29 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
228 Heat 2 days recovery 0.51 >More info 0.31 >More info Mock 2 days recovery seedling Original data GEO bulk
229 4h decapitation -0.27 >More info -0.55 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
230 agb1 -ABA LF 0.27 >More info 0.55 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
231 WT Shoot Hypoxia 0.20 >More info 0.62 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
232 nbp35-3/- 0.69 >More info 0.13 >More info WT whole seedling Original data GEO bulk
233 ABA control 0.13 >More info 0.69 >More info No ABA control Original data GEO bulk
234 Shoot submergence 7h 0.81 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
235 gun1-9 norflurazon 0.51 >More info 0.29 >More info gun1-9 control Original data GEO bulk
236 xyl-grown cell culture- 1h 1mM Glc -0.54 >More info -0.26 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
237 anac017-2 AntimycinA 3h -0.50 >More info -0.30 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
238 gabaculin 0.53 >More info 0.27 >More info WT Col-0 seedling Original data GEO bulk
239 phyB mutant 16C 4hrs 0.76 >More info 0.04 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
240 WT seedlings NaCl -0.51 >More info -0.28 >More info WT seedlings control Seedlings Original data GEO bulk
241 CT101 ozone 0.54 >More info 0.24 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
242 npr1 0.51 >More info 0.27 >More info WT(COL) Original data GEO bulk
243 Col-0 mbs1-1 HL 0h -0.56 >More info -0.21 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
244 Col-0 INA 48h -0.26 >More info -0.51 >More info Col-0 MOCK 48h Original data GEO bulk
245 IAA7mII over-expressor IAA Treated 0.08 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
246 hexa mutant (higher order mutant) 0.50 >More info 0.26 >More info col control (higher order mutant) Original data GEO bulk
247 shoot-10 μM DEX- 6 hr 0.51 >More info 0.25 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
248 cct-1 mutant 9-day-old seedlings above-ground
portions		 -0.50 >More info -0.26 >More info WT 7-day-old seedlings above-ground portions seedling Original data
249 Shoot apex inflorescence (after bolting) 0.11 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
250 root - 08% oxygen - 2h 0.02 >More info 0.74 >More info root - 21% oxygen - 2h Original data GEO bulk
251 Dry midnight -0.55 >More info -0.20 >More info Wet midnight water-limited whole rosette Original data GEO bulk
252 Aerobic e1 ate2 0.12 >More info 0.63 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
253 scrm-D 0.52 >More info 0.22 >More info Col-0 WT whole seedling Original data GEO bulk
254 cs26 short-day -0.50 >More info -0.24 >More info Leaves-WT-SD leaf Original data GEO bulk
255 root cap pGL2 8h BL 0.50 >More info 0.24 >More info root cap pGL2 0h BL brassinosteroid root Original data
256 seedling 3h after HZE WT 0.72 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
257 Dark 2day ivd 0.74 >More info -0.01 >More info 0h ivd Original data
258 rdo3 siliques 0.52 >More info 0.21 >More info WT Ler siliques Original data GEO bulk
259 Laer treat paclobutrazol (PAC) 0.54 >More info 0.19 >More info Laer Control leaf discs Original data GEO bulk
260 L2.4 mutant -0.57 >More info -0.15 >More info Wt Original data GEO bulk
261 elevated CO2 low Mg shoot -0.61 >More info -0.10 >More info atmospheric CO2 low Mg shoot Shoot Original data
262 control leaf (cmt 5d) -0.18 >More info -0.52 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
263 npr1 sni1 SA 0.56 >More info 0.13 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
264 seed germinating in countinuous light 24h SL 0.02 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
265 Cs root -0.13 >More info -0.56 >More info control root Original data GEO bulk
266 pXVE:HA-EDM2-a untreated 0.50 >More info 0.19 >More info Col-0 untreated seedlings Original data GEO bulk
267 rli -0.51 >More info -0.18 >More info WT whole plant Original data GEO bulk
268 short 12-degree- -0.18 >More info -0.51 >More info control short Original data GEO bulk
269 Apex mir-319b 17DAS -0.54 >More info -0.13 >More info Apex Col 14DAS Original data GEO bulk
270 ahg2-1sid2-2 -0.65 >More info -0.01 >More info WT (Col) control Original data GEO bulk
271 CAX1/CAX3 mutant 0.50 >More info 0.16 >More info Col whole plant Original data GEO bulk
272 gpa1 -ABA GC -0.12 >More info -0.54 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
273 10min Reillumination IP RNA 0.15 >More info 0.51 >More info 1h Dark IP RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
274 bri1-116 -0.07 >More info 0.73 >More info Col seedling Original data GEO bulk
275 pif4pif5 mut 1h FR -0.52 >More info -0.12 >More info WT 1h FR Original data GEO bulk
276 mutant acs4A (single mutant) 0.50 >More info 0.14 >More info col control (single mutant) Original data GEO bulk
277 Light 3day wt -0.51 >More info -0.13 >More info 0h wt Original data
278 Mock pft1 leaf -0.61 >More info -0.03 >More info Mock Col-0 leaf water leaf Original data GEO bulk
279 Constans-mutant 0.50 >More info 0.13 >More info Col control above-ground whole plant Original data GEO bulk
280 siliques AtHb1 control 0.11 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
281 roots ethylene 0.10 >More info 0.51 >More info roots air Original data GEO bulk
282 root - 04% oxygen - 48h -0.07 >More info 0.67 >More info root - 21% oxygen - 48h Original data GEO bulk
283 hen1 -0.51 >More info -0.07 >More info Ler Original data GEO bulk
284 ceh1 mutant 0.55 >More info 0.03 >More info Parent line Original data
285 Oxidative Stress 3 h (shoot) -0.62 >More info 0.06 >More info Stress mock 3 h (shoot) Original data Stress treatments
286 root - 01% oxygen - 30min 0.04 >More info 0.52 >More info root - 21% oxygen - 30min Original data GEO bulk
287 Col-0 wt Hypoxic -0.09 >More info 0.65 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
288 gpa1 -ABA LF 0.59 >More info -0.04 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
289 root - 04% oxygen - 30min -0.03 >More info 0.57 >More info root - 21% oxygen - 30min Original data GEO bulk
290 CCA1-ox 6am non-polysomal 0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
291 35S::Zat12 -0.04 >More info 0.53 >More info WT Original data GEO bulk
292 20m.KCl 0.17 >More info -0.65 >More info To. KCl 14 day old Roots Original data GEO bulk
293 R. solani AG2-1 -0.51 >More info 0.05 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
294 root - 08% oxygen - 30min -0.25 >More info 0.71 >More info root - 21% oxygen - 30min Original data GEO bulk
295 4d red light grown hmr-22 seedlings 0.66 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
296 P.syringae vir 4 h (leaf) -0.11 >More info 0.55 >More info Mock 4 h (leaf) Original data Elicitor treatments
297 shoots bhlh100/101 100uM Fe 0.60 >More info -0.16 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
298 ahg2-1 -0.55 >More info 0.13 >More info WT (Col) control Original data GEO bulk
299 ACN1-2 0.12 >More info -0.52 >More info col-7 Original data GEO bulk
300 Lip0 UV 0.15 >More info -0.52 >More info Lip0 mock UV seedling Original data
301 bak1-3 untreated -0.13 >More info 0.50 >More info WT untreated untreated Original data GEO bulk
302 ARR22-ox -0.56 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings