4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on Whole root - S 48H
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "Whole root - S 48H"  Help Download transcriptome of top 30
Score Experiment Correlation from
Whole root - S 48H		 Correlation to
Whole root - S 48H		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Whole root - S 48H 1.00 >More info 1.00 >More info Whole root - S 0H Original data GEO bulk
2 Whole root - S 72H 0.95 >More info 0.96 >More info Whole root - S 0H Original data GEO bulk
3 Whole root - S 24H 0.95 >More info 0.95 >More info Whole root - S 0H Original data GEO bulk
4 Whole root - S 12H 0.91 >More info 0.90 >More info Whole root - S 0H Original data GEO bulk
5 Whole root - S 3H 0.81 >More info 0.89 >More info Whole root - S 0H Original data GEO bulk
6 seedling -S Exp 0.80 >More info 0.86 >More info seedling FN Exp seedling Original data
7 -Sulfate 24 h 0.72 >More info 0.84 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
8 Ibuprofen 3 h 0.52 >More info 0.70 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
9 plant (Col-0) 4h phytoprostane A1 0.58 >More info 0.54 >More info plant (tga2-5-6) 4h control Original data GEO bulk
10 6-trichlorophenoxyacetic acid 3 h 0.43 >More info 0.68 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
11 ARR22-ox 0.58 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
12 tetraploid -0.42 >More info -0.61 >More info diploid Original data GEO bulk
13 (Ws-2)+100 uM As 0.61 >More info 0.41 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
14 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.59 >More info 0.43 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
15 seedling h S Exp -0.46 >More info -0.56 >More info seedling -S Exp seedling Original data
16 oas-a1.1 root 0.33 >More info 0.68 >More info WT-Untreated Root Original data GEO bulk
17 Seedling KUA1-IOX est 0.56 >More info 0.44 >More info Seedling KUA1-IOX mock Original data
18 5-Triiodobenzoic acid3 h 0.57 >More info 0.43 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
19 nia1nia2noa1-2 0.55 >More info 0.45 >More info Col-0 whole seedlings Original data GEO bulk
20 P-chlorophenoxy- isobutyric acid 3 h 0.34 >More info 0.66 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
21 -Sulfate 2 h 0.45 >More info 0.55 >More info Mock 2 h (1500uM sulfate) Original data Response to sulfate limitation
22 Whole root - low pH 6H 0.61 >More info 0.38 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
23 Phytoprostane A1 4 h 0.54 >More info 0.45 >More info Col-0 Original data GEO bulk
24 G3P 0.38 >More info 0.61 >More info Mock distal leaves Original data GEO bulk
25 Mutant axr3-1 0.52 >More info 0.46 >More info Col Original data GEO bulk
26 2hr continuous KNO3 PeR cell -0.40 >More info -0.58 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
27 seedling 24h after Gamma atm-1 0.41 >More info 0.57 >More info seedling day 2 unirradiated atm-1 24h Original data
28 root epidermis and lateral root cap pH4.6 0.58 >More info 0.39 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
29 Mutant axr3-1 (IAA) 0.43 >More info 0.53 >More info Col (IAA) Original data GEO bulk
30 3x(p) -0.29 >More info -0.67 >More info 2x two week old seedlings Original data
31 seedling 24h after Gamma WT 0.42 >More info 0.53 >More info seedling day 2 unirradiated WT 24h Original data
32 cop1 Seedling BL+ABA 0.58 >More info 0.36 >More info WT Seedling BL+ABA Original data GEO bulk
33 cell culture 4 h phytoprostane A1 0.59 >More info 0.35 >More info cell culture 4 h control Original data GEO bulk
34 root longitudinal zone-3 pH 4.6 0.43 >More info 0.51 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
35 Whole root - low pH 24H 0.53 >More info 0.40 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
36 ga1-3 scl3-1 0.37 >More info 0.56 >More info ga1-3 whole root Original data
37 inhibitor B Treated 0.60 >More info 0.33 >More info Negative Control Original data GEO bulk
38 nia1nia2 0.53 >More info 0.39 >More info Col-0 whole seedlings Original data GEO bulk
39 Hydrogen Peroxide 500 uM 0.38 >More info 0.54 >More info Control RB and PER Hydrogen Peroxide Original data
40 essp4/sdg8-5 mutant 0.63 >More info 0.29 >More info wild type leaf Original data GEO bulk
41 ahg2-1 0.50 >More info 0.42 >More info WT (Col) control Original data GEO bulk
42 ahg2-1sid2-2 0.39 >More info 0.52 >More info WT (Col) control Original data GEO bulk
43 Tsu-1 -Fe 24h 0.40 >More info 0.51 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
44 Tsu -Fe 24h Roots 0.40 >More info 0.51 >More info Tsu +Fe 24h Roots Original data GEO bulk
45 Day Time Treatment 0.40 >More info 0.51 >More info Day Time Control 1hr white light pulse aerial rosette Original data
46 Chemically 0.35 >More info 0.56 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
47 Fenclorim 24hr 0.62 >More info 0.28 >More info Acetone 24hr root Original data GEO bulk
48 Selenate (shoot) 0.36 >More info 0.53 >More info Ws (shoot) Original data GEO bulk
49 Shoot Selenate 0.36 >More info 0.53 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
50 bbx24 in Simulated Shade -0.37 >More info -0.51 >More info WT in simulated shade shade seedling Original data
51 Glyphosate EC50 0.32 >More info 0.55 >More info Carrier (Glyphosate) Original data GEO bulk
52 6h volatiles Sp. HRO-C48 -0.64 >More info -0.23 >More info 6h untreated whole seedling Original data GEO bulk
53 Selenate (root) 0.70 >More info 0.17 >More info Ws (root) Original data GEO bulk
54 Root Selenate 0.70 >More info 0.17 >More info Root control 40 micromolar selenate Root Original data GEO bulk
55 COL-0-Fe--root 0.52 >More info 0.35 >More info COL-0-Ctrl--root root Original data
56 cat2-2; 8h switch to ambient CO2 concentrations; 0.27 >More info 0.60 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
57 ptpks2 0.19 >More info 0.67 >More info Col-WT leaves Original data GEO bulk
58 Mutant tga2_5_6 -0.36 >More info -0.50 >More info Col-0 Original data GEO bulk
59 plant (tga2-5-6) 4h control -0.36 >More info -0.50 >More info plant (Col-0) 4h control Original data GEO bulk
60 35S::PI ap3-3 35S::AP-GR +DEX 0.30 >More info 0.55 >More info 0hr DEX Original data GEO bulk
61 Laer pretreat JA Flg22 0h 0.35 >More info 0.50 >More info Laer pretreat water control leaf discs Original data GEO bulk
62 plant (tga2-5-6) 4h phytoprostane A1 0.64 >More info 0.20 >More info plant (tga2-5-6) 4h control Original data GEO bulk
63 root cells stele 140mM NaCl 3 hours 0.62 >More info 0.22 >More info root cells stele standard 1 hour root cells stele Original data
64 T8 leaf-drought 0.52 >More info 0.31 >More info T8 leaf-well watered Original data GEO bulk
65 sdg8-2 mutant 0.54 >More info 0.29 >More info wild type leaf Original data GEO bulk
66 ANAC102 over-expressor 0.31 >More info 0.52 >More info C24 Original data GEO bulk
67 mp-B4149 mutant IAA 0.60 >More info 0.23 >More info GR-bdl IAA Original data GEO bulk
68 Pseudomonas -0.31 >More info -0.51 >More info Control pseudomonas treated whole seedling Original data GEO bulk
69 IAA7mII over-expressor IAA Treated 0.13 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
70 bri1-116 0.08 >More info 0.73 >More info Col seedling Original data GEO bulk
71 Mutant nph4-1_arf19-1 0.56 >More info 0.24 >More info Col Original data GEO bulk
72 HRE1-RNAi20 hypoxia 6 hrs -0.25 >More info -0.55 >More info Col upon hypoxia 6 hrs hypoxia seedling roots Original data GEO bulk
73 seed germinating in countinuous light 24h SL 0.13 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
74 Heat shock optimum 0.14 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
75 4x -0.25 >More info -0.54 >More info 2x two week old seedlings Original data
76 gapcp1gapcp2 0.50 >More info 0.28 >More info WT Original data GEO bulk
77 JA 0.58 >More info 0.20 >More info Col-0 mock Whole seedling Original data GEO bulk
78 myb61 xylem -0.23 >More info -0.55 >More info wt xylem xylem Original data GEO bulk
79 root cells epidermis 140mM NaCl 3 hours 0.54 >More info 0.23 >More info root cells epidermis standard 1 hour root cells epidermis Original data
80 Fenclorim 4hr 0.56 >More info 0.21 >More info Acetone 4hr root Original data GEO bulk
81 3x(m) -0.11 >More info -0.66 >More info 2x two week old seedlings Original data
82 root cells cortex 140mM NaCl 3 hours 0.59 >More info 0.17 >More info root cells cortex standard 1 hour root cells cortex Original data
83 sicy-192 gun1-101 cotyledons 0.54 >More info 0.20 >More info WT cotyledons cotyledons Original data
84 GA4 3 h (ga1 seed) 0.53 >More info 0.20 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
85 Col0-PsmES4326-24hpi 0.12 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
86 ubc13A -Fe -0.53 >More info -0.19 >More info Col -Fe root Original data GEO bulk
87 atmyc2 Seedling BL 0.11 >More info 0.61 >More info WT Seedling BL Original data GEO bulk
88 Night Time Treatment 0.22 >More info 0.50 >More info Night Time Control 1hr white light pulse aerial rosette Original data
89 Laer pretreat GA Flg22 1h -0.00 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
90 root Dosed gold 0.54 >More info 0.16 >More info root No gold .125 mM gold 24 h roots Original data
91 0.125 mM gold 24 h 0.54 >More info 0.16 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
92 short 10-degree- 0.15 >More info 0.55 >More info control short Original data GEO bulk
93 WT (Col) glucose 0.17 >More info 0.52 >More info WT (Col) glucose seedlings Original data GEO bulk
94 gun1-1 -lincomycin -0.08 >More info -0.61 >More info Col-0 -lincomycin Original data GEO bulk
95 whole roots 140 mM NaCl 4 hour 0.50 >More info 0.15 >More info whole roots standard Original data GEO bulk
96 Leafminer damaged seedlings 0.09 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
97 Blue Light 45 min -0.06 >More info -0.59 >More info White Light 45min Original data Light treatments
98 root cells stele 140mM NaCl 1 hour 0.54 >More info 0.10 >More info root cells stele standard 1 hour root cells stele Original data
99 Shoot apex inflorescence (after bolting) -0.01 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
100 triploid female excess 0.14 >More info 0.50 >More info tetraploid Original data GEO bulk
101 aux1 mutant roots air -0.53 >More info -0.10 >More info roots IAA Original data GEO bulk
102 root longitudinal zone-2 pH 4.6 0.10 >More info 0.52 >More info root longitudinal zone-2 pH 5.7 Original data GEO bulk
103 35S::RSL4 -0.64 >More info 0.06 >More info Col-0 Control root Original data GEO bulk
104 Col-0 0h NAA 0.56 >More info 0.01 >More info Col-0 6h MOCK Original data GEO bulk
105 DUO1 induced 24h 0.52 >More info 0.05 >More info 24hr-not-induced whole plant Original data GEO bulk
106 short 12-degree- -0.02 >More info 0.56 >More info control short Original data GEO bulk
107 SA 24h 0.06 >More info -0.56 >More info EtOH 24h 24hr Original data GEO bulk
108 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
109 ein2 1% sucrose 14-day-old 0.57 >More info -0.07 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
110 siliques AtHb1 control -0.05 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
111 nas4x leaves + Fe -0.50 >More info 0.08 >More info WT leaves + Fe Leaves Original data GEO bulk
112 Col BTH -0.28 >More info 0.67 >More info Col rosettes Original data GEO bulk
113 WT 3H Cold 0.37 >More info -0.55 >More info WT control Original data GEO bulk