4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on ahg2-1
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "ahg2-1"  Help Download transcriptome of top 30
Score Experiment Correlation from
ahg2-1		 Correlation to
ahg2-1		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 ahg2-1 1.00 >More info 1.00 >More info WT (Col) control Original data GEO bulk
2 ahg2-1sid2-2 0.89 >More info 0.93 >More info WT (Col) control Original data GEO bulk
3 ahg2-1abi1-1 0.83 >More info 0.55 >More info WT (Col) control Original data GEO bulk
4 msh1 recA3 untreated 0.61 >More info 0.69 >More info WT untreated above-ground parts Original data GEO bulk
5 COL-0-Fe--shoot 0.47 >More info 0.77 >More info COL-0-Ctrl--shoot shoot Original data
6 cdpk6-yfp 0.56 >More info 0.64 >More info Kan seedlings Original data GEO bulk
7 Tsu -Fe 24h Roots 0.56 >More info 0.61 >More info Tsu +Fe 24h Roots Original data GEO bulk
8 Tsu-1 -Fe 24h 0.56 >More info 0.61 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
9 gapcp1gapcp2 0.54 >More info 0.60 >More info WT Original data GEO bulk
10 sta1 0.49 >More info 0.64 >More info WT Original data GEO bulk
11 root - 01% oxygen - 48h 0.50 >More info 0.62 >More info root - 21% oxygen - 48h Original data GEO bulk
12 Col-0 wt Hypoxic 0.53 >More info 0.59 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
13 toc1-1-85hr 0.42 >More info 0.68 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
14 TNT-seedlings 0.41 >More info 0.67 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
15 seedling 24h after Gamma WT 0.44 >More info 0.64 >More info seedling day 2 unirradiated WT 24h Original data
16 tfl1-1-16ºC -0.54 >More info -0.53 >More info WT-16ºC Original data GEO bulk
17 seedling 24h after Gamma atm-1 0.39 >More info 0.68 >More info seedling day 2 unirradiated atm-1 24h Original data
18 root endodermis and quiescent center pH4.6 0.50 >More info 0.55 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
19 msh1 recA3 heat shock 0.61 >More info 0.43 >More info WT heat shock above-ground parts Original data GEO bulk
20 root longitudinal zone-2 -Fe 0.38 >More info 0.66 >More info root longitudinal zone-2 standard Original data GEO bulk
21 35S::PI ap3-3 35S::AP-GR +DEX 0.55 >More info 0.48 >More info 0hr DEX Original data GEO bulk
22 root cortex pH4.6 0.52 >More info 0.51 >More info root cortex pH5.7 Original data GEO bulk
23 L2.4 mutant 0.45 >More info 0.58 >More info Wt Original data GEO bulk
24 pnp1-1 1wk -P 0.53 >More info 0.49 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
25 35S::MBF1c -0.39 >More info -0.63 >More info control Original data GEO bulk
26 Selenate (shoot) 0.53 >More info 0.48 >More info Ws (shoot) Original data GEO bulk
27 inhibitor B Treated 0.59 >More info 0.42 >More info Negative Control Original data GEO bulk
28 Shoot Selenate 0.53 >More info 0.48 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
29 COL-0-Fe--root 0.49 >More info 0.52 >More info COL-0-Ctrl--root root Original data
30 root epidermis and lateral root cap pH4.6 0.50 >More info 0.50 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
31 Col-0 (t-zeatin 3 h) 0.41 >More info 0.58 >More info Col-0 Original data Cytokinin treatment of seedlings
32 AtLysM RLK1 mutant water 0.48 >More info 0.51 >More info WT water Original data GEO bulk
33 toc1-1-81hr 0.41 >More info 0.57 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
34 aox1a:rpoTmp MLD stressed 0.42 >More info 0.56 >More info WT(Col0) MLD stressed (control aox1a:rpoTmp) leaf Original data
35 red illumination +lincomycin 0.28 >More info 0.68 >More info red illumination -lincomycin Original data GEO bulk
36 Shoot apex inflorescence (after bolting) 0.31 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
37 Whole root - low pH 24H 0.59 >More info 0.36 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
38 E2Fa-Dpa 0.54 >More info 0.40 >More info WT Original data GEO bulk
39 Whole root - low pH 12H 0.55 >More info 0.39 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
40 low CO2 + dark -0.27 >More info -0.67 >More info normal CO2 + light Original data GEO bulk
41 Whole root - S 12H 0.42 >More info 0.52 >More info Whole root - S 0H Original data GEO bulk
42 bri1-116 0.20 >More info 0.73 >More info Col seedling Original data GEO bulk
43 Chemically 0.29 >More info 0.64 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
44 Whole root - S 48H 0.42 >More info 0.50 >More info Whole root - S 0H Original data GEO bulk
45 Mutant axr3-1 0.37 >More info 0.54 >More info Col Original data GEO bulk
46 Whole root - S 24H 0.34 >More info 0.57 >More info Whole root - S 0H Original data GEO bulk
47 phr1 Shoot-Pi 0.53 >More info 0.37 >More info WT Root-Pi shoots Original data GEO bulk
48 ein2 1% sucrose 14-day-old 0.53 >More info 0.37 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
49 Imidazolinone EC50 0.38 >More info 0.52 >More info Carrier (Imidazolinone) Original data GEO bulk
50 Selenate (root) 0.50 >More info 0.39 >More info Ws (root) Original data GEO bulk
51 Root Selenate 0.50 >More info 0.39 >More info Root control 40 micromolar selenate Root Original data GEO bulk
52 root - 04% oxygen - 48h 0.13 >More info 0.76 >More info root - 21% oxygen - 48h Original data GEO bulk
53 1 h Light IP RNA 0.25 >More info 0.63 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
54 seedlings + TSA 0.51 >More info 0.36 >More info control seedlings 10-day old whole seedling Original data GEO bulk
55 low CO2 + light -0.25 >More info -0.62 >More info normal CO2 + light Original data GEO bulk
56 whole roots 140 mM NaCl 32 hour -0.51 >More info -0.35 >More info whole roots standard Original data GEO bulk
57 aox1a:rpoTmp untreated 0.66 >More info 0.19 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
58 WT Root Hypoxia 0.28 >More info 0.55 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
59 line J1551-5 days control + 2 days salt s 0.33 >More info 0.50 >More info line J1551-7 days-control Original data
60 IAA/inhibitor B Treated 0.53 >More info 0.29 >More info IAA Treated Original data GEO bulk
61 ARR21C-ox 0.59 >More info 0.23 >More info Col-0 Original data ARR21C overexpression
62 MG132 3 h 0.24 >More info 0.58 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
63 1 h Light Total RNA 0.10 >More info 0.72 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
64 anac017-2 water 3h 0.56 >More info 0.25 >More info WT water 3h 3h_water Original data GEO bulk
65 Mock pft1 leaf 0.29 >More info 0.52 >More info Mock Col-0 leaf water leaf Original data GEO bulk
66 root - 08% oxygen - 48h 0.15 >More info 0.65 >More info root - 21% oxygen - 48h Original data GEO bulk
67 seed germinating in countinuous light 24h SL 0.13 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
68 elf3-7-23ºC -0.23 >More info -0.57 >More info WT-23ºC Original data GEO bulk
69 mkk1 24h BTH rep -0.27 >More info -0.52 >More info Col-0 24h BTH rep Original data GEO bulk
70 Col0-PsmES4326-24hpi 0.18 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
71 cpctry 0.16 >More info 0.63 >More info Col Original data GEO bulk
72 WT hypoxia -0.23 >More info -0.56 >More info WT normoxia whole rosette Original data
73 root cells endodermis and quiescent center -Fe 0.57 >More info 0.22 >More info whole roots standard Original data GEO bulk
74 Root -Cs 0.52 >More info 0.26 >More info Control-root Original data GEO bulk
75 root longitudinal zone-1 -Fe 0.23 >More info 0.55 >More info root longitudinal zone-1 standard Original data GEO bulk
76 Laer pretreat GA Flg22 1h 0.07 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
77 csn3-1 light 0.51 >More info 0.26 >More info WT light Original data GEO bulk
78 shoots bhlh100/101 0uM Fe 0.52 >More info 0.25 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
79 upb1-1 elongation zone -0.20 >More info -0.57 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
80 Cs shoot -0.07 >More info -0.70 >More info control shoot Original data GEO bulk
81 protoplasted roots pH4.6 0.50 >More info 0.25 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
82 Mutant axr3-1 (IAA) 0.14 >More info 0.61 >More info Col (IAA) Original data GEO bulk
83 Col BTH 0.08 >More info 0.67 >More info Col rosettes Original data GEO bulk
84 Leafminer damaged seedlings 0.18 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
85 Mutant sav3-2 (SH) 0.15 >More info 0.56 >More info Col-0 (SH) Original data GEO bulk
86 sav3-2 shade 0.15 >More info 0.56 >More info Col-0 shade seedlings Original data GEO bulk
87 Mutant sav3-2 (WL) 0.20 >More info 0.51 >More info Col-0 (WL) Original data GEO bulk
88 4h decapitation 0.19 >More info 0.52 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
89 siliques AtHb1 control 0.19 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
90 Shoot dark control 7h -0.18 >More info -0.53 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
91 sav3-2 light 0.20 >More info 0.51 >More info Col-0 light seedlings Original data GEO bulk
92 shl-2 Pool -0.16 >More info -0.54 >More info Ler Pool seedling Original data GEO bulk
93 sid2-2 mock 0.53 >More info 0.16 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
94 Heat no recovery 0.53 >More info 0.16 >More info Mock no recovery seedling Original data GEO bulk
95 tfl1-1-23ºC -0.15 >More info -0.54 >More info WT-23ºC Original data GEO bulk
96 Apex mir-3TCP 14DAS 0.04 >More info 0.63 >More info Apex Col 14DAS Original data GEO bulk
97 WT (Col) glucose 0.11 >More info 0.56 >More info WT (Col) glucose seedlings Original data GEO bulk
98 Red Light 45min -0.10 >More info -0.56 >More info White Light 45min Original data Light treatments
99 ara1/2mut 0.12 >More info 0.54 >More info Col-3 Original data GEO bulk
100 Col leaves 120h LT 0.13 >More info 0.52 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
101 IAA7mII over-expressor IAA Treated -0.04 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
102 expressing C2 MeJA 0.54 >More info 0.10 >More info LUC2T Original data GEO bulk
103 M6PR transgenic leaf 0mM NaCl -0.12 >More info -0.52 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
104 hrpA fliC 7h 0.01 >More info -0.65 >More info Mock 7h hrpA fliC Original data GEO bulk
105 camta1-2 -0.10 >More info -0.53 >More info Col-0-WT Original data GEO bulk
106 root stele -S 0.06 >More info 0.56 >More info root stele pH5.7 Original data GEO bulk
107 root longitudinal zone-3 -Fe -0.00 >More info 0.62 >More info root longitudinal zone-3 standard Original data GEO bulk
108 OXUPB1-2 meristematic zone 0.09 >More info 0.53 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
109 Shoot dark control 24h -0.11 >More info -0.51 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
110 35SpBVR3 -0.08 >More info -0.54 >More info WT Original data GEO bulk
111 12h-DC3000 avrRpm1 -0.05 >More info -0.56 >More info 12h-DC3000 leaves Original data GEO bulk
112 root epidermis and lateral root cap -S 0.07 >More info 0.54 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
113 eto1-4 + AVG -0.09 >More info -0.52 >More info eto1-4 whole seedling Original data GEO bulk
114 petiole in FRD -0.06 >More info -0.54 >More info petiole in WL petioles Original data GEO bulk
115 Col ozone 3h -0.07 >More info -0.53 >More info Col clean-air 3h ozone Original data GEO bulk
116 SHR-GR Time 3H Dex -0.08 >More info -0.52 >More info SHR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
117 Heat shock optimum -0.05 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
118 FarRed Light 4 h 0.09 >More info 0.50 >More info White Light 4 h Original data Light treatments
119 Blue Light 4 h -0.01 >More info 0.60 >More info White Light 4 h Original data Light treatments
120 ptpks2 0.07 >More info 0.50 >More info Col-WT leaves Original data GEO bulk
121 tcp13 0.03 >More info 0.54 >More info WT inflorescences Original data GEO bulk
122 Col-0 shade -0.02 >More info -0.55 >More info Col-0 light seedlings Original data GEO bulk
123 Inflorescences Trp1 0.02 >More info 0.55 >More info Inflorescences ler inflorescences Original data GEO bulk
124 0 h Attim 17-1 1 0.06 >More info 0.51 >More info 0 h WT seed Original data
125 DC3000 hrcC 2 h (leaf) -0.02 >More info -0.54 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
126 CCA1-ox 6am non-polysomal 0.05 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
127 high-R:FR bud axillary 0.03 >More info 0.51 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
128 msh1 albino 0.53 >More info -0.00 >More info WT aerial part Original data GEO bulk
129 GST 4 h (leaf) 0.10 >More info -0.63 >More info Mock 4 h (leaf) Original data Elicitor treatments
130 Red Light 4 h -0.01 >More info -0.51 >More info White Light 4 h Original data Light treatments
131 root - 04% oxygen - 2h -0.05 >More info 0.57 >More info root - 21% oxygen - 2h Original data GEO bulk
132 mpk6-ko Flg22 4h -0.01 >More info -0.50 >More info mpk6-ko H2O 4h Original data GEO bulk
133 E.coli TUV86 2 fliC 7h 0.08 >More info -0.55 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
134 Flagellin 4 h (leaf) 0.04 >More info -0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
135 21h-DC3000 avrRpm1 -0.05 >More info 0.51 >More info 21h-DC3000 leaves Original data GEO bulk
136 tmm1-inflorescence-tips -0.20 >More info 0.65 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
137 SA 4mM 0.14 >More info -0.59 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
138 Lipopolysaccaride4 h (leaf) 0.07 >More info -0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
139 Pseudomonas 0.13 >More info -0.55 >More info Control pseudomonas treated whole seedling Original data GEO bulk
140 hrpA 7h 0.11 >More info -0.51 >More info Mock 7h hrpA Original data GEO bulk
141 WT 2-4h Xanthomonas 0.14 >More info -0.52 >More info WT T0 Original data GEO bulk
142 Dry midday 0.22 >More info -0.59 >More info Wet midday water-limited whole rosette Original data GEO bulk
143 RGA-GR-DEX 0.33 >More info -0.50 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk