4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on WT Root Hypoxia
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List of experiments correlated with "WT Root Hypoxia"  Help Download transcriptome of top 30
Score Experiment Correlation from
WT Root Hypoxia		 Correlation to
WT Root Hypoxia		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 WT Root Hypoxia 1.00 >More info 1.00 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
2 root hypoxia total 0.91 >More info 0.87 >More info root control total Original data GEO bulk
3 root - 01% oxygen - 2h 0.90 >More info 0.87 >More info root - 21% oxygen - 2h Original data GEO bulk
4 MPK6 ox Root Hypoxia 0.96 >More info 0.81 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
5 Col-0 wt Hypoxic 0.87 >More info 0.89 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
6 roottip hypoxia total 0.87 >More info 0.84 >More info roottip control total Original data GEO bulk
7 root - 04% oxygen - 2h 0.82 >More info 0.85 >More info root - 21% oxygen - 2h Original data GEO bulk
8 root - 04% oxygen - 48h 0.78 >More info 0.87 >More info root - 21% oxygen - 48h Original data GEO bulk
9 2 hr Hypoxia Total RNA 0.85 >More info 0.79 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
10 MPK6 ox Shoot Hypoxia 0.81 >More info 0.83 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
11 WT Shoot Hypoxia 0.82 >More info 0.82 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
12 Col-0 2HS 0.85 >More info 0.77 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
13 root - 01% oxygen - 30min 0.81 >More info 0.80 >More info root - 21% oxygen - 30min Original data GEO bulk
14 root - 04% oxygen - 30min 0.78 >More info 0.82 >More info root - 21% oxygen - 30min Original data GEO bulk
15 shoot hypoxia total 0.80 >More info 0.78 >More info shoot control total Original data GEO bulk
16 root - 08% oxygen - 2h 0.71 >More info 0.83 >More info root - 21% oxygen - 2h Original data GEO bulk
17 Col-0 low oxygen 0.83 >More info 0.71 >More info Col-0 control low oxygen root Original data GEO bulk
18 root - 01% oxygen - 48h 0.76 >More info 0.77 >More info root - 21% oxygen - 48h Original data GEO bulk
19 9 hr Hypoxia Total RNA 0.81 >More info 0.65 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
20 2 hr Hypoxia IP RNA 0.79 >More info 0.66 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
21 mdh -0.78 >More info -0.65 >More info Col Original data GEO bulk
22 root - 08% oxygen - 30min 0.64 >More info 0.79 >More info root - 21% oxygen - 30min Original data GEO bulk
23 Anoxia 0.73 >More info 0.65 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
24 35S:PCO1 hypoxia -0.68 >More info -0.65 >More info WT hypoxia whole rosette Original data
25 Col upon hypoxia 6 hrs 0.84 >More info 0.48 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
26 Aerobic e1 ate2 0.61 >More info 0.71 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
27 Light 0.74 >More info 0.56 >More info Control Original data GEO bulk
28 ckh2 CK25 0.64 >More info 0.65 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
29 Aerobic prt6 0.59 >More info 0.70 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
30 9 hr Hypoxia 1 hr recovery Total RNA 0.75 >More info 0.53 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
31 9 hr Hypoxia IP RNA 0.76 >More info 0.50 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
32 OE-HRA1 2HS  -0.69 >More info -0.56 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
33 bri1-116 0.52 >More info 0.73 >More info Col seedling Original data GEO bulk
34 1.5 hr ammonium 0.75 >More info 0.49 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
35 estradiole-induced ANAC059 -0.58 >More info -0.65 >More info transgenic (empty vector inducible system) Original data GEO bulk
36 root - 08% oxygen - 48h 0.48 >More info 0.73 >More info root - 21% oxygen - 48h Original data GEO bulk
37 TNT-seedlings 0.52 >More info 0.68 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
38 vtc2 mature somatic embryo 0.61 >More info 0.58 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
39 Cs root -0.72 >More info -0.43 >More info control root Original data GEO bulk
40 R. amphibia submerged 0.65 >More info 0.49 >More info R. amphibia air Original data GEO bulk
41 FHY3p dark+DEX -0.74 >More info -0.40 >More info FHY3p dark+mock Original data GEO bulk
42 Root submergence 24h 0.72 >More info 0.42 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
43 WT seedlings MV 0.65 >More info 0.48 >More info WT seedlings control Seedlings Original data GEO bulk
44 prt6-1 0.70 >More info 0.43 >More info Col-0 imbibed for 24 h Pre-germinated seeds Original data GEO bulk
45 seedlings + TSA 0.61 >More info 0.51 >More info control seedlings 10-day old whole seedling Original data GEO bulk
46 afb3-1 2h KCl -0.72 >More info -0.38 >More info Ws 2h KCl 2 hours of 5 mM KCl Arabidopsis root Original data GEO bulk
47 Pseudomonas 0.70 >More info 0.40 >More info Control pseudomonas treated whole seedling Original data GEO bulk
48 9 hr Hypoxia 1 hr recovery IP RNA 0.68 >More info 0.42 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
49 ckh2 CK0 0.73 >More info 0.36 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
50 20m.KCl -0.49 >More info -0.59 >More info To. KCl 14 day old Roots Original data GEO bulk
51 R. sylvestris submerged 0.65 >More info 0.42 >More info R. sylvestris air Original data GEO bulk
52 oas-a1.1 root -0.57 >More info -0.50 >More info WT-Untreated Root Original data GEO bulk
53 WT light 0.59 >More info 0.47 >More info WT dark Original data GEO bulk
54 Tsu -Fe 24h Roots 0.70 >More info 0.36 >More info Tsu +Fe 24h Roots Original data GEO bulk
55 Tsu-1 -Fe 24h 0.70 >More info 0.36 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
56 Root submergence 7h 0.66 >More info 0.40 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
57 cop1 Seedling Dark 0.49 >More info 0.57 >More info WT Seedling Dark Original data GEO bulk
58 UV Stress 24 h (root) -0.67 >More info -0.38 >More info Stress mock 24 h (root) Original data Stress treatments
59 Col-0 Root 100 mM ATP 30 min 0.55 >More info 0.49 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
60 root cells epidermis 140mM NaCl 48 hours 0.55 >More info 0.48 >More info root cells epidermis standard 1 hour root cells epidermis Original data
61 elevated CO2 high Mg root -0.74 >More info -0.28 >More info atmospheric CO2 high Mg root Root Original data
62 root cells epidermis 140mM NaCl 20 hours 0.58 >More info 0.44 >More info root cells epidermis standard 1 hour root cells epidermis Original data
63 seed germinating in countinuous light 24h SL 0.35 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
64 F1 hybrid submerged 0.57 >More info 0.44 >More info F1 hybrid air Original data GEO bulk
65 Cs shoot -0.55 >More info -0.46 >More info control shoot Original data GEO bulk
66 estradiole-induced ANAC092 -0.60 >More info -0.41 >More info transgenic (empty vector inducible system) Original data GEO bulk
67 35S::RSL4 -0.46 >More info -0.55 >More info Col-0 Control root Original data GEO bulk
68 vte1-1 3d vernalization -0.59 >More info -0.41 >More info WT 3d vernalization Original data GEO bulk
69 gun1gun5 Norflurazon 0.54 >More info 0.46 >More info Norflurazon a herbicide (Norflurazon) seedling Original data GEO bulk
70 mp-B4149 mutant IAA 0.63 >More info 0.37 >More info GR-bdl IAA Original data GEO bulk
71 Col BTH 0.33 >More info 0.67 >More info Col rosettes Original data GEO bulk
72 ckh1 CK0 0.61 >More info 0.38 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
73 Mutant bri1 0.52 >More info 0.47 >More info Ws-2 Original data Comparison of plant hormone related mutant
74 Col-0 HS 0.41 >More info 0.58 >More info Col-0 control heat shocked seedling Original data GEO bulk
75 WT (Col-0) heat shock 0.41 >More info 0.58 >More info WT (Col-0) whole seedling Original data GEO bulk
76 mtf1-1 0.63 >More info 0.35 >More info Col0 root Original data
77 CeO2 germinant -0.69 >More info -0.29 >More info Millipore Water germinant CeO2 seedling Original data
78 inhibitor B Treated 0.50 >More info 0.48 >More info Negative Control Original data GEO bulk
79 ckh1 CK25 0.65 >More info 0.32 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
80 Whole root - low pH 3H 0.37 >More info 0.60 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
81 3.5h KNO3 Whole root -0.38 >More info -0.59 >More info 3.5h KCl control Whole root Whole root Original data GEO bulk
82 mutant-line409 0.67 >More info 0.29 >More info WT-control whole plant Original data GEO bulk
83 root protoplasts 40 mM NaCl 0.38 >More info 0.58 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
84 phr1 phl1 Root-Pi -0.32 >More info -0.63 >More info WT Shoot+Pi roots Original data GEO bulk
85 oligomycin 1 h 0.37 >More info 0.58 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
86 2hr continuous KNO3 PrR cell 0.38 >More info 0.57 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
87 0.2µM SMX -0.66 >More info -0.28 >More info control Whole seedling Original data GEO bulk
88 IAA/inhibitor A Treated 0.60 >More info 0.34 >More info IAA Treated Original data GEO bulk
89 ahg2-1abi1-1 0.65 >More info 0.29 >More info WT (Col) control Original data GEO bulk
90 Ws HS 0.42 >More info 0.52 >More info Ws control heat shocked seedling Original data GEO bulk
91 spx1 spx2 complete -0.69 >More info -0.24 >More info WT complete seedlings Original data
92 1.5 hr nitrate 0.58 >More info 0.35 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
93 Mutant axr3-1 0.57 >More info 0.36 >More info Col Original data GEO bulk
94 Ws seedlings -0.57 >More info -0.36 >More info ged1 seedlings Original data GEO bulk
95 ged1 seedlings 0.57 >More info 0.36 >More info Ws seedlings Original data GEO bulk
96 root cells columella root cap -Fe 0.54 >More info 0.37 >More info whole roots standard Original data GEO bulk
97 WT hypoxia 0.58 >More info 0.33 >More info WT normoxia whole rosette Original data
98 Nuclear GSH1 -0.55 >More info -0.35 >More info Cytoplasmic GSH1 Control Original data GEO bulk
99 siliques AtHb1 control 0.38 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
100 Heat shock optimum 0.25 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
101 root callus inducing medium 12 h -0.58 >More info -0.32 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
102 hypoxic 0.59 >More info 0.31 >More info WT aerobic hypoxia Original data GEO bulk
103 TA induced 0.59 >More info 0.31 >More info Methanol TA Suspension cells Original data GEO bulk
104 Shoot apex inflorescence (after bolting) 0.24 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
105 upb1-1 elongation zone -0.23 >More info -0.66 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
106 IRP1-OE-Fe--root -0.60 >More info -0.28 >More info COL-0-Fe--root root Original data
107 short 17-degree- -0.22 >More info -0.66 >More info control short Original data GEO bulk
108 35S::HRE1 Hypoxic 0.59 >More info 0.29 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
109 per1 in Pi deficiency medium 0.52 >More info 0.35 >More info Col in Pi deficiency medium root Original data GEO bulk
110 IAA 0.5 h 0.26 >More info 0.61 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
111 shoot-10 μM DEX- 12 hr 0.35 >More info 0.52 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
112 oas-a1.1 Cd 18h 0.58 >More info 0.29 >More info Cd 18h root Root Original data GEO bulk
113 SCL3 OE -0.67 >More info -0.19 >More info Col-0 whole root Original data GEO bulk
114 WT +elf18 10h -0.52 >More info -0.34 >More info WT untreated elf18 Original data GEO bulk
115 T101D 10mM NH4NO3 -0.19 >More info -0.67 >More info col 10mM NH4NO3 Root Original data
116 csn5 (csn5a-2 csn5b) dark 0.58 >More info 0.28 >More info WT dark Original data GEO bulk
117 arr-BA-sample 0.64 >More info 0.22 >More info Wt-BA-sample seedling Original data
118 shoot control pRBCS 0.61 >More info 0.24 >More info shoot control total Original data GEO bulk
119 root cells endodermis 140mM NaCl 48 hours 0.50 >More info 0.35 >More info root cells endodermis standard 1 hour root cells endodermis Original data
120 root cells stele 140mM NaCl 48 hours 0.50 >More info 0.34 >More info root cells stele standard 1 hour root cells stele Original data
121 Selenate (root) 0.51 >More info 0.33 >More info Ws (root) Original data GEO bulk
122 Root Selenate 0.51 >More info 0.33 >More info Root control 40 micromolar selenate Root Original data GEO bulk
123 root cells endodermis 140mM NaCl 32 hours 0.55 >More info 0.29 >More info root cells endodermis standard 1 hour root cells endodermis Original data
124 8 hr ammonium 0.64 >More info 0.20 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
125 CBF3 0mM NaCl 0.58 >More info 0.26 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
126 mbd11 mutant thaliana 10-day-old seedling 0.56 >More info 0.27 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
127 Genotoxic Stress 3 h (root) -0.63 >More info -0.20 >More info Stress mock 3 h (root) Original data Stress treatments
128 ahg2-1 0.55 >More info 0.28 >More info WT (Col) control Original data GEO bulk
129 root callus inducing medium 24h -0.50 >More info -0.33 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
130 WT (Ler) CK200 0.56 >More info 0.26 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
131 root longitudinal zone-1 -Fe 0.24 >More info 0.58 >More info root longitudinal zone-1 standard Original data GEO bulk
132 bbx24 in Simulated Shade -0.23 >More info -0.59 >More info WT in simulated shade shade seedling Original data
133 root cells stele 140mM NaCl 32 hours 0.51 >More info 0.30 >More info root cells stele standard 1 hour root cells stele Original data
134 9m.KNO3 -0.52 >More info -0.29 >More info To. KNO3 14 day old Roots Original data GEO bulk
135 ptpks2 -0.20 >More info -0.61 >More info Col-WT leaves Original data GEO bulk
136 root cells cortex 140mM NaCl 32 hours 0.55 >More info 0.25 >More info root cells cortex standard 1 hour root cells cortex Original data
137 etr1 1% sucrose 12-day-old 0.73 >More info 0.07 >More info Col-0 1% sucrose 12-day-old Original data GEO bulk
138 root cells cortex 140mM NaCl 48 hours 0.54 >More info 0.26 >More info root cells cortex standard 1 hour root cells cortex Original data
139 Dark 4 h pls RedLight 1min 0.25 >More info 0.55 >More info Dark 4 h Original data Light treatments
140 elevated CO2 low Mg root -0.58 >More info -0.22 >More info atmospheric CO2 low Mg root Root Original data
141 gun4-1 0.53 >More info 0.26 >More info WT Col-0 seedling Original data GEO bulk
142 Col-0 low oxygen 0.77 >More info 0.02 >More info Col-0 Original data GEO bulk
143 Tsu-1 -Fe 48h 0.74 >More info 0.04 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
144 Tsu -Fe 48h Roots 0.74 >More info 0.04 >More info Tsu +Fe 24h Roots Original data GEO bulk
145 axr2-BR 0.59 >More info 0.19 >More info BR BR dark-grown seedlings Original data GEO bulk
146 csn3-1 dark 0.58 >More info 0.20 >More info WT dark Original data GEO bulk
147 WT Seedling BL 0.24 >More info 0.54 >More info WT Seedling Dark Original data GEO bulk
148 2hr transitory KNO3 PrR cell 0.11 >More info 0.66 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
149 24h +Pi -0.58 >More info -0.18 >More info 24h -Pi root Original data GEO bulk
150 Hypoxic prt6 0.53 >More info 0.23 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
151 tumour 0.68 >More info 0.08 >More info non-tumor tumour Original data GEO bulk
152 WT +elf18 2h -0.56 >More info -0.19 >More info WT untreated elf18 Original data GEO bulk
153 FLIGHT BRIC G PDFU-112 seedlings 0.53 >More info 0.22 >More info GROUNDCONTROL BRIC G PDFU-135 seedlings seedling Original data
154 abi3-6 12 DAF Seed 0.50 >More info 0.24 >More info WT (Col-0) 12 DAF Seed-3 developing seeds dissected from sliques Original data
155 csn4-1 mutant 0.54 >More info 0.20 >More info WT dark Original data GEO bulk
156 15m.KCl 0.57 >More info 0.17 >More info To. KCl 14 day old Roots Original data GEO bulk
157 vte2 leaves 0h LT -0.01 >More info 0.75 >More info Col leaves 0h LT h 9-11th adult leaves Original data
158 iron minus 6 h -0.68 >More info -0.05 >More info iron +6 h root Original data GEO bulk
159 siliques WT hypoxia 0.72 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
160 myb50 xylem 0.60 >More info 0.13 >More info wt xylem xylem Original data GEO bulk
161 Truncated AC2 T1 -0.60 >More info -0.13 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
162 root cells cortex 140mM NaCl 20 hours 0.50 >More info 0.23 >More info root cells cortex standard 1 hour root cells cortex Original data
163 SCR-GR Time 12H Dex 0.51 >More info 0.21 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
164 Stem tissue 5 days NAA 0.64 >More info 0.08 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
165 P.p 6hai 0.62 >More info 0.08 >More info At-Control roots Original data GEO bulk
166 elevated CO2 normal Mg root -0.52 >More info -0.18 >More info atmospheric CO2 normal Mg root Root Original data
167 1h +Pi -0.13 >More info -0.57 >More info 1h -Pi root Original data GEO bulk
168 Bay-0-3h IAA -0.60 >More info -0.09 >More info Bay-0-0h IAA whole plant Original data GEO bulk
169 Sha-3h IAA -0.61 >More info -0.08 >More info Sha-0h IAA whole plant Original data GEO bulk
170 Wounding Stress3 h (root) -0.54 >More info -0.14 >More info Stress mock 3 h (root) Original data Stress treatments
171 Leafminer damaged seedlings 0.12 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
172 hira-root -0.50 >More info -0.18 >More info WT-root root Original data
173 gun5 control 0.58 >More info 0.10 >More info Col-0 control Original data GEO bulk
174 RRE1 Chitin 0.62 >More info 0.05 >More info Chitin Original data GEO bulk
175 9m.KCl 0.64 >More info 0.03 >More info To. KCl 14 day old Roots Original data GEO bulk
176 toc1-1-85hr 0.12 >More info 0.54 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
177 afb3-1 2h KNO3 0.13 >More info 0.53 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
178 Col-O low light 0.52 >More info 0.13 >More info Col-O bule light Original data GEO bulk
179 Col0-PsmES4326-24hpi 0.03 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
180 2hr continuous KNO3 ECR cell -0.03 >More info -0.61 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
181 GA3 1 h (ga1) 0.50 >More info 0.13 >More info Mock 1 h (ga1) Original data Basic hormone treatment of seedlings
182 IAA 24h 0.50 >More info 0.13 >More info control 24h root Original data GEO bulk
183 msg2-BR 0.57 >More info 0.06 >More info BR BR dark-grown seedlings Original data GEO bulk
184 myb50 cork 0.55 >More info 0.07 >More info wt cork cork Original data GEO bulk
185 KCl germinant -0.58 >More info -0.04 >More info Millipore Water germinant KCl seedling Original data
186 P.p 2.5hai 0.65 >More info -0.03 >More info At-Control roots Original data GEO bulk
187 Heat Recovery 24 h (root) -0.59 >More info -0.03 >More info Stress mock 24 h (root) Original data Stress treatments
188 mutant-line1135 0.51 >More info 0.11 >More info WT-control whole plant Original data GEO bulk
189 gabaculin 0.51 >More info 0.11 >More info WT Col-0 seedling Original data GEO bulk
190 ddm1-12 0.51 >More info 0.11 >More info wt whole seedling Original data GEO bulk
191 Mutant ga1-5 0.51 >More info 0.11 >More info Ler-1 Original data Comparison of plant hormone related mutant
192 shoots bhlh100/101 100uM Fe 0.52 >More info 0.10 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
193 Mutant cry1 -0.58 >More info -0.03 >More info Col-0 Original data GEO bulk
194 cry1 low light -0.58 >More info -0.03 >More info Col-O low light Original data GEO bulk
195 IAA 3 h 0.09 >More info 0.52 >More info Mock 3 h Original data Basic hormone treatment of seedlings
196 seedlings +5AC 0.51 >More info 0.09 >More info control seedlings 10-day old whole seedling Original data GEO bulk
197 toc1-1-69hr 0.51 >More info 0.09 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
198 atr mock 0.50 >More info 0.10 >More info WT mock shoot apical meristem Original data
199 2hr transitory KNO3 EPR cell 0.09 >More info 0.51 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
200 8-DAC chr11-1chr17-1 -0.55 >More info -0.04 >More info 8-DAC Col-0 leaf explants Original data
201 RRE2 Chitin 0.59 >More info -0.00 >More info Chitin Original data GEO bulk
202 P35S:rGRF3 0.64 >More info -0.05 >More info WS Original data GEO bulk
203 gir flower 33d 0.53 >More info 0.05 >More info Col-7 flower 33d flower Original data GEO bulk
204 CCA1-ox 6am non-polysomal 0.07 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
205 Bay-0-1h IAA -0.54 >More info -0.03 >More info Bay-0-0h IAA whole plant Original data GEO bulk
206 IAA7mII over-expressor mock -0.51 >More info -0.05 >More info empty vector mock Original data GEO bulk
207 P.p 10.5hai 0.59 >More info -0.04 >More info At-Control roots Original data GEO bulk
208 axr2 0.63 >More info -0.09 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
209 phr1 Shoot-Pi -0.08 >More info 0.62 >More info WT Root-Pi shoots Original data GEO bulk
210 Chemically -0.01 >More info 0.55 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
211 hog1-7 0.53 >More info 0.00 >More info wt whole seedling Original data GEO bulk
212 C58 35dpi 0.65 >More info -0.12 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
213 rcf1-1 cold 0h 0.54 >More info -0.01 >More info WT cold 0h Control seedlings Original data GEO bulk
214 mutant-line774 0.53 >More info 0.00 >More info WT-control whole plant Original data GEO bulk
215 Laer pretreat GA Flg22 1h -0.18 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
216 GV3101 6dpi 0.55 >More info -0.03 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
217 Shoot submergence 7h 0.51 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
218 Sha-1h IAA -0.50 >More info -0.01 >More info Sha-0h IAA whole plant Original data GEO bulk
219 cngc1 -0.55 >More info 0.05 >More info Ws-2 Seedlings Original data GEO bulk
220 JMJ24-IBM1 double knockout -0.50 >More info -0.00 >More info WT Original data GEO bulk
221 ddm1 mutant seedlings -0.60 >More info 0.10 >More info control seedlings 10-day old whole seedling Original data GEO bulk
222 ga1-3/brm-1 0.58 >More info -0.09 >More info wt shoots Original data GEO bulk
223 vtc2 day 7 induction 0.57 >More info -0.08 >More info WT day 7 induction day 7 induction of somatic embryogenesis Original data GEO bulk
224 IAA7mII over-expressor IAA Treated -0.20 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
225 Cambium 5 days NAA 0.53 >More info -0.05 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
226 4C 2h(SOIL) -0.08 >More info 0.56 >More info 4C 0h(SOIL) Original data GEO bulk
227 amiRAP hypoxic -0.63 >More info 0.15 >More info hypoxic hypoxia Original data GEO bulk
228 Mutant arf19-1 0.02 >More info -0.50 >More info Col Original data GEO bulk
229 Imbibed 3 h (seed) 0.51 >More info -0.05 >More info Dry seed Original data Time course of early seed germination
230 3x(m) -0.06 >More info 0.52 >More info 2x two week old seedlings Original data
231 MG132 3 h -0.09 >More info 0.52 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
232 iron minus 24h -0.61 >More info 0.18 >More info iron +24h root Original data GEO bulk
233 4d red light grown hmr-22 seedlings 0.62 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
234 ubc13A-es -0.50 >More info 0.09 >More info Col-es root Original data GEO bulk
235 ani1 T16 -0.55 >More info 0.15 >More info WT T16 root tissue Original data GEO bulk
236 Callus 0.53 >More info -0.14 >More info Control for tissue data callus Original data GEO bulk
237 pmr5 -0.12 >More info 0.50 >More info Col-0 rosette Original data GEO bulk
238 myb3 myb3r4d -0.54 >More info 0.19 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
239 ACN1-2 Sucrose -0.51 >More info 0.24 >More info Col-7 Sucrose Original data GEO bulk
240 sfr6 drought 0.25 >More info -0.50 >More info WT drought All aerial tissue Original data GEO bulk
241 ABA control 0.32 >More info -0.57 >More info No ABA control Original data GEO bulk
242 ANOXIA 0.51 >More info -0.28 >More info ANOXIA+SUCROSE Original data GEO bulk
243 Mutant iaa5_6_19(IAA) 0.55 >More info -0.40 >More info Col (IAA) Original data GEO bulk