4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root cells stele 140mM NaCl 32 hours
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Score Experiment Correlation from
root cells stele 140mM NaCl 32 hours		 Correlation to
root cells stele 140mM NaCl 32 hours		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root cells stele 140mM NaCl 32 hours 1.00 >More info 1.00 >More info root cells stele standard 1 hour root cells stele Original data
2 root cells stele 140mM NaCl 48 hours 0.96 >More info 0.95 >More info root cells stele standard 1 hour root cells stele Original data
3 root cells stele 140mM NaCl 20 hours 0.94 >More info 0.93 >More info root cells stele standard 1 hour root cells stele Original data
4 root cells stele 140mM NaCl 8 hours 0.92 >More info 0.86 >More info root cells stele standard 1 hour root cells stele Original data
5 root cells stele 140mM NaCl 1 hour 0.88 >More info 0.87 >More info root cells stele standard 1 hour root cells stele Original data
6 root cells stele 140mM NaCl 3 hours 0.89 >More info 0.83 >More info root cells stele standard 1 hour root cells stele Original data
7 root cells endodermis 140mM NaCl 32 hours 0.84 >More info 0.84 >More info root cells endodermis standard 1 hour root cells endodermis Original data
8 root cells epidermis 140mM NaCl 20 hours 0.80 >More info 0.85 >More info root cells epidermis standard 1 hour root cells epidermis Original data
9 root cells endodermis 140mM NaCl 48 hours 0.83 >More info 0.82 >More info root cells endodermis standard 1 hour root cells endodermis Original data
10 root cells cortex 140mM NaCl 20 hours 0.84 >More info 0.80 >More info root cells cortex standard 1 hour root cells cortex Original data
11 root cells cortex 140mM NaCl 32 hours 0.81 >More info 0.81 >More info root cells cortex standard 1 hour root cells cortex Original data
12 root cells epidermis 140mM NaCl 48 hours 0.79 >More info 0.83 >More info root cells epidermis standard 1 hour root cells epidermis Original data
13 root cells epidermis 140mM NaCl 8 hours 0.77 >More info 0.83 >More info root cells epidermis standard 1 hour root cells epidermis Original data
14 root cells epidermis 140mM NaCl 32 hours 0.77 >More info 0.83 >More info root cells epidermis standard 1 hour root cells epidermis Original data
15 root cells endodermis 140mM NaCl 20 hours 0.82 >More info 0.78 >More info root cells endodermis standard 1 hour root cells endodermis Original data
16 root cells epidermis 140mM NaCl 3 hours 0.77 >More info 0.82 >More info root cells epidermis standard 1 hour root cells epidermis Original data
17 root cells cortex 140mM NaCl 8 hours 0.83 >More info 0.75 >More info root cells cortex standard 1 hour root cells cortex Original data
18 root cells cortex 140mM NaCl 48 hours 0.81 >More info 0.76 >More info root cells cortex standard 1 hour root cells cortex Original data
19 root cells endodermis 140mM NaCl 3 hours 0.81 >More info 0.71 >More info root cells endodermis standard 1 hour root cells endodermis Original data
20 root cells cortex 140mM NaCl 1 hour 0.77 >More info 0.75 >More info root cells cortex standard 1 hour root cells cortex Original data
21 root cells epidermis 140mM NaCl 1 hour 0.70 >More info 0.82 >More info root cells epidermis standard 1 hour root cells epidermis Original data
22 root cells endodermis 140mM NaCl 8 hours 0.80 >More info 0.71 >More info root cells endodermis standard 1 hour root cells endodermis Original data
23 root cells cortex 140mM NaCl 3 hours 0.78 >More info 0.68 >More info root cells cortex standard 1 hour root cells cortex Original data
24 root cells endodermis 140mM NaCl 1 hour 0.70 >More info 0.74 >More info root cells endodermis standard 1 hour root cells endodermis Original data
25 line J1551-5 days control + 2 days salt s 0.56 >More info 0.75 >More info line J1551-7 days-control Original data
26 root longitudinal zone-4 NaCl 0.63 >More info 0.68 >More info root longitudinal zone-4 Original data GEO bulk
27 NaCl Col 0.59 >More info 0.58 >More info Col Original data GEO bulk
28 upb1-1 elongation zone -0.54 >More info -0.62 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
29 whole roots 140 mM NaCl 30 minutes 0.57 >More info 0.57 >More info whole roots standard Original data GEO bulk
30 root stele pH4.6 0.64 >More info 0.49 >More info root stele pH5.7 Original data GEO bulk
31 whole roots 140 mM NaCl 1 hour 0.58 >More info 0.52 >More info whole roots standard Original data GEO bulk
32 root epidermis and lateral root cap -S 0.49 >More info 0.61 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
33 root epidermis and lateral root cap pH4.6 0.48 >More info 0.62 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
34 bbx24 in Simulated Shade -0.42 >More info -0.66 >More info WT in simulated shade shade seedling Original data
35 whole roots 140 mM NaCl 4 hour 0.48 >More info 0.59 >More info whole roots standard Original data GEO bulk
36 root endodermis and quiescent center 40 mM NaCl 0.48 >More info 0.57 >More info root endodermis and quiescent center Original data GEO bulk
37 Col-0 low oxygen 0.50 >More info 0.54 >More info Col-0 control low oxygen root Original data GEO bulk
38 24h +Pi -0.58 >More info -0.46 >More info 24h -Pi root Original data GEO bulk
39 rhd2 0.46 >More info 0.57 >More info WT Small excised segments of primary root tissue corresponding to root-hair elongation zone Original data GEO bulk
40 epidermis auxin 0.47 >More info 0.55 >More info epidermis control 5 uM indole-3-acetic acid epidermis Original data GEO bulk
41 root control p35S 0.60 >More info 0.41 >More info root control total control root Original data GEO bulk
42 root stele 40 mM NaCls 0.58 >More info 0.42 >More info root stele Original data GEO bulk
43 root Dosed gold 0.58 >More info 0.41 >More info root No gold .125 mM gold 24 h roots Original data
44 0.125 mM gold 24 h 0.58 >More info 0.41 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
45 root control pSHR 0.52 >More info 0.46 >More info root control total control root Original data GEO bulk
46 Osmotic Stress 24 h (root) 0.55 >More info 0.43 >More info Stress mock 24 h (root) Original data Stress treatments
47 AgNO3 3 h 0.39 >More info 0.59 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
48 root cortex pH4.6 0.39 >More info 0.59 >More info root cortex pH5.7 Original data GEO bulk
49 root hypoxia pSHR 0.55 >More info 0.41 >More info root hypoxia total hypoxia root Original data GEO bulk
50 whole roots -Fe 6 hour 0.36 >More info 0.60 >More info whole roots standard Original data GEO bulk
51 2hr continuous KNO3 and MSX and Gln PeR cell 0.43 >More info 0.53 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
52 whole roots 140 mM NaCl 16 hour 0.39 >More info 0.57 >More info whole roots standard Original data GEO bulk
53 line J2731-5 days control + 2 days salt s 0.42 >More info 0.54 >More info line J2731-7 days-control Original data
54 SCL3 OE -0.55 >More info -0.40 >More info Col-0 whole root Original data GEO bulk
55 root control pRPL11C 0.55 >More info 0.39 >More info root control total control root Original data GEO bulk
56 roots IAA 0.37 >More info 0.56 >More info roots mock Original data GEO bulk
57 OXUPB1-2 meristematic zone 0.50 >More info 0.43 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
58 root longitudinal zone-3 pH 4.6 0.34 >More info 0.59 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
59 35S:VND7-VP16-GR+DEX +CHX 0.29 >More info 0.63 >More info 35S:VND7-VP16-GR+CHX 10mM cycloheximide (CHX) 2hrs followed by 10mM dexamethazone (DEX) 4hrs whole seedlings Original data GEO bulk
60 Heat shock optimum 0.24 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
61 seed germinating in countinuous light 24h SL 0.22 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
62 bri1-116 0.15 >More info 0.73 >More info Col seedling Original data GEO bulk
63 root longitudinal zone-3 NaCl 0.38 >More info 0.50 >More info root longitudinal zone-3 Original data GEO bulk
64 eds16 whole leaf 1dpi 0.15 >More info 0.72 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
65 Chemically 0.36 >More info 0.51 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
66 2hr continuous KCl and MSX control PeR cell -0.36 >More info -0.50 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
67 SCR 72hr-S 0.34 >More info 0.50 >More info SCR 0hr endodermis Original data
68 Shoot apex inflorescence (after bolting) 0.18 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
69 roottip hypoxia total 0.24 >More info 0.59 >More info roottip control total Original data GEO bulk
70 siliques AtHb1 control 0.30 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
71 Leafminer damaged seedlings 0.26 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
72 shoots bhlh100/101 100uM Fe -0.00 >More info -0.82 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
73 WT Root Hypoxia 0.30 >More info 0.51 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
74 root hypoxia pRPL11C 0.51 >More info 0.29 >More info root hypoxia total hypoxia root Original data GEO bulk
75 SCR-GR Time 3H Dex 0.20 >More info 0.60 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
76 root hypoxia p35S 0.53 >More info 0.26 >More info root hypoxia total hypoxia root Original data GEO bulk
77 Col0-PsmES4326-24hpi 0.18 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
78 Col BTH 0.12 >More info 0.67 >More info Col rosettes Original data GEO bulk
79 Root wt CLE10 0.25 >More info 0.53 >More info Root wt CLE25 root tip Original data GEO bulk
80 root - 01% oxygen - 48h 0.21 >More info 0.55 >More info root - 21% oxygen - 48h Original data GEO bulk
81 stele pSHR 0h BL 0.54 >More info 0.21 >More info WR 35S 0h BL brassinosteroid root Original data
82 BAM8-Lig Ox untreated 0.17 >More info 0.55 >More info WT untreated none shoot Original data
83 WT Shoot Hypoxia 0.22 >More info 0.50 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
84 Full C2 T3 -0.03 >More info -0.69 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
85 red illumination +lincomycin 0.03 >More info 0.66 >More info red illumination -lincomycin Original data GEO bulk
86 Laer pretreat GA Flg22 1h -0.05 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
87 root - 04% oxygen - 2h 0.07 >More info 0.58 >More info root - 21% oxygen - 2h Original data GEO bulk
88 WT (Ler) CK25 0.04 >More info 0.59 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
89 Whole root - low pH 1H 0.10 >More info 0.51 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
90 tga1 tga4 2h KNO3 0.09 >More info 0.52 >More info Col 0 2h KNO3 5 mM KNO3 root Original data GEO bulk
91 GO5; harvested 8h continiously maintained in high
CO2;		 -0.08 >More info -0.53 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
92 Mh0 UV 0.07 >More info 0.53 >More info Mh0 mock UV seedling Original data
93 CCA1-ox 6am non-polysomal 0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
94 IAA7mII over-expressor IAA Treated -0.15 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
95 WT seedlings IAA -0.05 >More info 0.52 >More info WT seedlings control Seedlings Original data GEO bulk