4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on WT (Ler) CK25
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List of experiments correlated with "WT (Ler) CK25"  Help Download transcriptome of top 30
Score Experiment Correlation from
WT (Ler) CK25		 Correlation to
WT (Ler) CK25		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 WT (Ler) CK25 1.00 >More info 1.00 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
2 WT (Ler) CK200 0.90 >More info 0.86 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
3 WT (Ler) TSA 0.71 >More info 0.52 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and 100 ng/ml TSA. tissue culture Original data GEO bulk
4 ckh2 CK0 0.61 >More info 0.52 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
5 bri1-116 0.38 >More info 0.73 >More info Col seedling Original data GEO bulk
6 ckh1 CK0 0.73 >More info 0.34 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
7 Red/FR Light45min 0.29 >More info 0.73 >More info FarRed Light 45min Original data Light treatments
8 Heat shock optimum 0.37 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
9 root control pSHR 0.58 >More info 0.41 >More info root control total control root Original data GEO bulk
10 2hr continuous KNO3 ECR cell -0.37 >More info -0.62 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
11 pif3 Dark 1h 0.64 >More info 0.32 >More info WT Dark 1h etiolated seedling Original data GEO bulk
12 FarRed Light 45min -0.43 >More info -0.53 >More info White Light 45min Original data Light treatments
13 phyABDE Rc50 0.59 >More info 0.34 >More info phyABDE Dark red light whole seedling Original data GEO bulk
14 IPT8 induced 24h 0.50 >More info 0.41 >More info Control 24h 24 hours primary root tip (5 mm) Original data GEO bulk
15 Fei-0-30min IAA 0.51 >More info 0.39 >More info Fei-0-0h IAA whole plant Original data GEO bulk
16 whole roots -Fe 6 hour 0.57 >More info 0.33 >More info whole roots standard Original data GEO bulk
17 Fei-0-1h IAA 0.53 >More info 0.35 >More info Fei-0-0h IAA whole plant Original data GEO bulk
18 Col-0-30min IAA 0.56 >More info 0.28 >More info Col-0-0h IAA whole plant Original data GEO bulk
19 mutant acs5D (single mutant) -0.56 >More info -0.27 >More info col control (single mutant) Original data GEO bulk
20 Col-0-1h IAA 0.54 >More info 0.27 >More info Col-0-0h IAA whole plant Original data GEO bulk
21 CLV3p cells -0.62 >More info -0.17 >More info Protoplast Induced Original data GEO bulk
22 5-Triiodobenzoic acid3 h 0.57 >More info 0.22 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
23 Oxidative Stress 3 h (root) 0.65 >More info 0.13 >More info Stress mock 3 h (root) Original data Stress treatments
24 WT(Ler) Rc15 0.54 >More info 0.23 >More info WT(Ler) Dark Original data GEO bulk
25 pif4pif5 mut dark 0.54 >More info 0.23 >More info WT dark Original data GEO bulk
26 Differentiation 24h 0.53 >More info 0.24 >More info Differentiation 0h leaves Original data
27 spx1 spx2 no Pi 0.63 >More info 0.13 >More info WT no Pi seedlings Original data
28 Col-0 (t-zeatin 3 h) 0.53 >More info 0.23 >More info Col-0 Original data Cytokinin treatment of seedlings
29 msh1 recA3 untreated 0.58 >More info 0.18 >More info WT untreated above-ground parts Original data GEO bulk
30 Light 4h steady-state 0.56 >More info 0.19 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
31 Shoot apex inflorescence (after bolting) 0.10 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
32 IAA7mII over-expressor IAA Treated 0.06 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
33 (Ws-2)+100 uM As 0.51 >More info 0.23 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
34 4C 3h -0.50 >More info -0.24 >More info 22C 3h Original data GEO bulk
35 4C 6h -0.51 >More info -0.22 >More info 22C 3h Original data GEO bulk
36 ckh1 CK25 0.60 >More info 0.11 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
37 AsAKiin11 T1 -0.50 >More info -0.20 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
38 BI-1-30min IAA 0.58 >More info 0.12 >More info BI-1-0h IAA whole plant Original data GEO bulk
39 ARR22-ox (t-zeatin 3 h) -0.56 >More info -0.13 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
40 NJ15 0.14 >More info 0.55 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
41 2d dark-grown pif1pif3pif4pif5 (pifq) mutant 0.57 >More info 0.11 >More info 2d dark-grown WT seedling Original data GEO bulk
42 SLWF infested -0.68 >More info 0.02 >More info SLWF uninfested rosette tissue Original data GEO bulk
43 Col-0 flu HL 0h 0.60 >More info 0.06 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
44 pif3 Dark 0h 0.52 >More info 0.13 >More info WT Dark 0h etiolated seedling Original data GEO bulk
45 0h light (+Lincomycin) 0.50 >More info 0.14 >More info 0h light (-Lincomycin) seedlings Original data GEO bulk
46 Laer pretreat GA Flg22 1h -0.07 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
47 root cells stele 140mM NaCl 32 hours 0.59 >More info 0.04 >More info root cells stele standard 1 hour root cells stele Original data
48 FILp cells -0.59 >More info -0.04 >More info Protoplast Induced Original data GEO bulk
49 BAM8-N Ox untreated 0.71 >More info -0.09 >More info WT untreated none shoot Original data
50 inhibitor B Treated 0.50 >More info 0.11 >More info Negative Control Original data GEO bulk
51 mbd4 mutant thaliana 10-day-old seedling -0.54 >More info -0.05 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
52 pif4pif5 low R/FR 0.52 >More info 0.06 >More info Col-0 low R/FR low R/FR seedlings Original data GEO bulk
53 csn4-1 dark -0.52 >More info -0.05 >More info WT light Original data GEO bulk
54 roottip hypoxia total -0.56 >More info 0.00 >More info roottip control total Original data GEO bulk
55 oligomycin 4 h 0.52 >More info 0.03 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
56 Genotoxic Stress 3 h (root) 0.54 >More info 0.01 >More info Stress mock 3 h (root) Original data Stress treatments
57 Col0-PsmES4326-24hpi -0.06 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
58 root cells stele 140mM NaCl 20 hours 0.53 >More info 0.01 >More info root cells stele standard 1 hour root cells stele Original data
59 35S::CBF2 -0.50 >More info -0.04 >More info Ws2 Original data GEO bulk
60 pvip1 pvip2 seedling -0.52 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
61 phyABDE 4-day dark- 2 hours Rc50 -0.03 >More info -0.50 >More info phyABDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
62 Mutant iaa5_6_19(IAA) 0.56 >More info -0.04 >More info Col (IAA) Original data GEO bulk
63 Brassinolide 0.5 h (det2) -0.61 >More info 0.10 >More info Mock 0.5 h (det2) Original data Basic hormone treatment of seedlings
64 CLV3n cells -0.55 >More info 0.05 >More info Protoplast Induced Original data GEO bulk
65 seed germinating in countinuous light 24h SL -0.17 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
66 Col BTH -0.18 >More info 0.67 >More info Col rosettes Original data GEO bulk
67 root cells stele 140mM NaCl 48 hours 0.50 >More info -0.01 >More info root cells stele standard 1 hour root cells stele Original data
68 AFB1 flg22 1h 0.50 >More info -0.01 >More info WT 0h Leaf tissue Original data GEO bulk
69 P.syringae vir 4 h (leaf) 0.02 >More info -0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
70 vtc2-1 -0.03 >More info 0.52 >More info Col-0 whole plant Original data GEO bulk
71 cat2-short-day 2d 0.52 >More info -0.04 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
72 tt4 -0.52 >More info 0.04 >More info WT aerial region Original data GEO bulk
73 Dry midnight 0.51 >More info -0.04 >More info Wet midnight water-limited whole rosette Original data GEO bulk
74 2d dark-grown WT(Col-0)/1 hr red light 0.52 >More info -0.05 >More info 2d dark-grown WT seedling Original data GEO bulk
75 Mutant NahG(leaf) 0.51 >More info -0.05 >More info Col-0 (leaf) Original data GEO bulk
76 GA3 0.5 h (ga1) 0.50 >More info -0.07 >More info Mock 0.5 h (ga1) Original data Basic hormone treatment of seedlings
77 iron minus 1 h 0.51 >More info -0.09 >More info iron +1 h root Original data GEO bulk
78 Leafminer damaged seedlings -0.15 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
79 root cortex -S -0.51 >More info 0.11 >More info root cortex pH5.7 Original data GEO bulk
80 CCA1-ox 6am non-polysomal -0.12 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
81 elf3-7-23ºC 0.60 >More info -0.25 >More info WT-23ºC Original data GEO bulk
82 gir root 4%glc -0.53 >More info 0.19 >More info Col-7 root 4%glc root Original data GEO bulk
83 GRX-overexpression seedlings IAA 0.21 >More info -0.50 >More info WT seedlings IAA Seedlings Original data GEO bulk
84 siliques AtHb1 control -0.25 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
85 bam7 untreated 0.58 >More info -0.47 >More info WT untreated none shoot Original data