4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Mutant NahG(leaf)
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Score Experiment Correlation from
Mutant NahG(leaf)		 Correlation to
Mutant NahG(leaf)		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Mutant NahG(leaf) 1.00 >More info 1.00 >More info Col-0 (leaf) Original data GEO bulk
2 NahG 0.94 >More info 0.99 >More info Col-0 Leaves Original data GEO bulk
3 eds16 whole leaf 5dpi 0.81 >More info 0.79 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
4 sid2 0.78 >More info 0.80 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
5 eds16 whole leaf 0h UI 0.78 >More info 0.80 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
6 camta1/3 warm -0.78 >More info -0.78 >More info WT warm entire aerial part Original data GEO bulk
7 camta2/3 warm -0.78 >More info -0.77 >More info WT warm entire aerial part Original data GEO bulk
8 INA -0.70 >More info -0.83 >More info CK INA seedling Original data
9 eds16 whole leaf 7d UI 0.74 >More info 0.77 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
10 Cor 24h -0.78 >More info -0.73 >More info Mock 24h Cor Original data GEO bulk
11 sid2-1 cold 0.74 >More info 0.77 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
12 Col-0 INA 48h -0.69 >More info -0.81 >More info Col-0 MOCK 48h Original data GEO bulk
13 Mutant siz1-3 -0.74 >More info -0.76 >More info Col-0 Original data GEO bulk
14 siz1-3 control -0.74 >More info -0.76 >More info Col-0 control Original data GEO bulk
15 PstDC3000 48h -0.68 >More info -0.81 >More info WT untreated 48hr leaf Original data GEO bulk
16 camta3-2 -0.79 >More info -0.70 >More info WT Original data GEO bulk
17 sid2-PsmES4326-24hpi 0.75 >More info 0.73 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
18 eds16 whole leaf 3dpi 0.78 >More info 0.69 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
19 WT powdery mildew -0.74 >More info -0.73 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
20 cpr5 -0.77 >More info -0.69 >More info WT seedling Original data GEO bulk
21 eds16 whole leaf 7dpi 0.70 >More info 0.75 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
22 Light 3day wt 0.73 >More info 0.71 >More info 0h wt Original data
23 WT-SA -0.69 >More info -0.74 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
24 phyB mutant 22C 10hrs 0.64 >More info 0.77 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
25 Col-0 INA 6d -0.70 >More info -0.71 >More info Col-0 MOCK 6d Original data GEO bulk
26 npr1-PsmES4326-24hpi 0.72 >More info 0.69 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
27 eds16 whole leaf 6hpi 0.68 >More info 0.72 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
28 Mutant siz1-3 (Drought) -0.74 >More info -0.66 >More info Col-0 (Drought) Original data GEO bulk
29 siz1-3 drought -0.74 >More info -0.66 >More info Col-0 drought Original data GEO bulk
30 camta1/2/3 warm -0.73 >More info -0.66 >More info WT warm entire aerial part Original data GEO bulk
31 UV Stress 24 h (shoot) -0.70 >More info -0.69 >More info Stress mock 24 h (shoot) Original data Stress treatments
32 sid2-2 safener 0.72 >More info 0.66 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
33 35S:RPS4 eds1-2 24h 0.71 >More info 0.67 >More info 35S:RPS4 24h leaves Original data
34 Col-0 DCA 48h -0.62 >More info -0.75 >More info Col-0 MOCK 48h Original data GEO bulk
35 camta3-1 -0.75 >More info -0.61 >More info WT Original data GEO bulk
36 cpr5 -0.69 >More info -0.67 >More info WT(COL) Original data GEO bulk
37 A. thaliana-A. lyrata hybrid 0.67 >More info 0.68 >More info A. thaliana mature leaves before flowering Original data GEO bulk
38 OH1 -0.69 >More info -0.66 >More info Col-0 leaves Original data GEO bulk
39 Octopus overexpressor 35SDYG25 -0.72 >More info -0.63 >More info WS Original data GEO bulk
40 35S:RPS4 eds1-2 8h 0.65 >More info 0.70 >More info 35S:RPS4 8h leaves Original data
41 tbf1-SA 0.67 >More info 0.67 >More info WT-SA 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
42 TaFLS overexpression line (OE2) 0.71 >More info 0.63 >More info Col-0 Rosette leaves Original data
43 WT in -N -0.71 >More info -0.63 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
44 A. lyrata 0.71 >More info 0.63 >More info A. thaliana mature leaves before flowering Original data GEO bulk
45 sid2-2 mock 0.68 >More info 0.65 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
46 aba3-1 -0.63 >More info -0.69 >More info wt Original data GEO bulk
47 SA -0.73 >More info -0.59 >More info WT mock Whole seedling Original data GEO bulk
48 BLM+INA -0.74 >More info -0.58 >More info CK BLM and INA seedling Original data
49 npr1 sni1 brca2a SA 0.69 >More info 0.62 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
50 efr-1 +elf18 10h 0.74 >More info 0.56 >More info WT +elf18 10h elf18 Original data GEO bulk
51 pmr4-1 control -0.67 >More info -0.63 >More info WT control uninoculated Original data GEO bulk
52 smg5-2 -0.61 >More info -0.68 >More info WT whole plant Original data GEO bulk
53 A6 mutant -0.68 >More info -0.60 >More info WT rosette leaves Rosette leaves Original data GEO bulk
54 S58-2 -0.66 >More info -0.62 >More info wt Original data GEO bulk
55 smg7b-1 -0.64 >More info -0.64 >More info WT whole plant Original data GEO bulk
56 CMV-WT -0.62 >More info -0.65 >More info Mock-At Aerial tissues Original data GEO bulk
57 Col whole leaf 7dpi -0.64 >More info -0.63 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
58 Col ozone 2d -0.59 >More info -0.68 >More info Col clean-air 2d ozone Original data GEO bulk
59 Elevated CO2 AMPLE N NIGHT -0.55 >More info -0.71 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
60 Col whole leaf 5 dpi -0.58 >More info -0.68 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
61 seedlings-week-old RECA1-overexpressing
transgenic		 -0.70 >More info -0.56 >More info seedlings-week-old Col-0 seedlings Original data
62 Col whole leaf 5dpi -0.62 >More info -0.64 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
63 cpr5scv1 -0.64 >More info -0.61 >More info WT(COL) Original data GEO bulk
64 downy mildew cotyledons late stage -0.62 >More info -0.63 >More info mock inoculated Cotyledons Original data GEO bulk
65 npr1-3 DCA 48h -0.66 >More info -0.59 >More info npr1-3 MOCK 48h Original data GEO bulk
66 UV -0.70 >More info -0.55 >More info WT aerial region Original data GEO bulk
67 npr1 sni1 SA -0.72 >More info -0.53 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
68 csn5 (csn5a-2 csn5b) light -0.73 >More info -0.52 >More info WT light Original data GEO bulk
69 toc1-1-57hr -0.59 >More info -0.66 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
70 OE WRKY63.3 high light -0.64 >More info -0.60 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
71 bZIP1ko mutant N-Light- 0.69 >More info 0.54 >More info WT-sib N-Light- whole plant Original data GEO bulk
72 Cor 10h -0.58 >More info -0.65 >More info Mock 10h Cor Original data GEO bulk
73 A. halleri 0.66 >More info 0.57 >More info A. thaliana mature leaves before flowering Original data GEO bulk
74 pad4-PsmES4326-24hpi 0.58 >More info 0.63 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
75 OE WRKY63.3 -0.67 >More info -0.54 >More info OE WRKY40.4 none leaf Original data GEO bulk
76 atmospheric CO2 low Mg shoot -0.76 >More info -0.45 >More info atmospheric CO2 normal Mg shoot Shoot Original data
77 Laer pretreat JA Flg22 0h 0.56 >More info 0.64 >More info Laer pretreat water control leaf discs Original data GEO bulk
78 miR 0h -0.60 >More info -0.60 >More info Col 0h Leaf Original data GEO bulk
79 sav3-2 light -0.51 >More info -0.69 >More info Col-0 light seedlings Original data GEO bulk
80 Mutant sav3-2 (WL) -0.51 >More info -0.69 >More info Col-0 (WL) Original data GEO bulk
81 20d after anthesis -0.68 >More info -0.51 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
82 vtc1 (II) -0.57 >More info -0.62 >More info Col (II) rosette Original data GEO bulk
83 Cor hrpS 10h -0.66 >More info -0.53 >More info Mock 10h Cor hrpS Original data GEO bulk
84 pmr4-1 powdery mildew -0.62 >More info -0.57 >More info WT powdery mildew uninoculated Original data GEO bulk
85 rsa3-1 Na 24h -0.64 >More info -0.54 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
86 Col ozone 3h -0.56 >More info -0.62 >More info Col clean-air 3h ozone Original data GEO bulk
87 Primisulfuron EC50 -0.61 >More info -0.57 >More info Carrier (primisulfuron) Original data GEO bulk
88 pad2-PsmES4326-24hpi 0.61 >More info 0.57 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
89 camta1/2/3 24h cold -0.60 >More info -0.58 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
90 csn3-1 light -0.70 >More info -0.47 >More info WT light Original data GEO bulk
91 WT +elf18 10h -0.72 >More info -0.45 >More info WT untreated elf18 Original data GEO bulk
92 GA -0.60 >More info -0.56 >More info none GA Rosette Original data GEO bulk
93 Total RNA 35S:HF-RPL18 -0.62 >More info -0.54 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
94 overexpresser LBD38 in -N 0.71 >More info 0.45 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
95 tga2 tga5 tga6 ctrl 0.71 >More info 0.45 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) control Original data
96 cdpk6-yfp -0.76 >More info -0.39 >More info Kan seedlings Original data GEO bulk
97 lht1 untreated -0.59 >More info -0.56 >More info WT untreated untreated leaf Original data GEO bulk
98 Triazolopyrimidine EC50 -0.61 >More info -0.54 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
99 npr1-1 SA 0.64 >More info 0.50 >More info Col-0 SA complete seedling Original data
100 HSP90 Reduced RNAi-B1 -0.65 >More info -0.49 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
101 S15-118 -0.60 >More info -0.54 >More info wt Original data GEO bulk
102 Light 3day ivd -0.56 >More info -0.58 >More info 0h ivd Original data
103 myb50 cork 0.56 >More info 0.58 >More info wt cork cork Original data GEO bulk
104 CLO 4mM -0.58 >More info -0.55 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
105 Imidazolinone EC50 -0.63 >More info -0.50 >More info Carrier (Imidazolinone) Original data GEO bulk
106 Col laser microdissected 5 dpi -0.57 >More info -0.56 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
107 erf5 erf6 0.62 >More info 0.50 >More info WT+water water seedlings Original data GEO bulk
108 35S:RPS4 eds1-2 2h 0.53 >More info 0.59 >More info 35S:RPS4 2h leaves Original data
109 bZIP1ko mutant N+Light- -0.74 >More info -0.38 >More info WT-sib N+Light- whole plant Original data GEO bulk
110 aox1a(line) untreated 0.41 >More info 0.71 >More info WT(Col0) untreated (control aox1a) leaf Original data
111 eds16 whole leaf 1dpi 0.65 >More info 0.46 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
112 atgsnor1-1 0.80 >More info 0.31 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
113 npr1-1 water -0.60 >More info -0.51 >More info Col-0 water complete seedling Original data
114 ataf1-1 mutant Col-0 Bgh inoculated -0.57 >More info -0.54 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
115 sni1 -0.49 >More info -0.62 >More info WT Original data GEO bulk
116 Col leaves 48h LT -0.61 >More info -0.49 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
117 bak1-3 +Pep2 10h -0.58 >More info -0.52 >More info WT +Pep2 10h Pep2 Original data GEO bulk
118 DFPM -0.56 >More info -0.54 >More info control Original data GEO bulk
119 toc1-1-81hr -0.58 >More info -0.52 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
120 Col whole leaf amplified 5 dpi -0.44 >More info -0.66 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
121 wrky72-1-NOCO2 INFECTED -0.54 >More info -0.54 >More info WT-NOCO2 INFECTED Original data GEO bulk
122 overexpresser LBD37 in -N 0.67 >More info 0.41 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
123 sid2-1 warm 0.69 >More info 0.39 >More info WT warm entire aerial part Original data GEO bulk
124 WT-drought -0.58 >More info -0.50 >More info WT-control leaf Original data
125 Elevated CO2 expanding leaf -0.65 >More info -0.42 >More info Ambient CO2 expanding leaf expanding leaf Original data
126 P.syringae AvrRpt2 4 h (leaf) -0.45 >More info -0.62 >More info Mock 4 h (leaf) Original data Elicitor treatments
127 Elevated CO2 AMPLE N DAY -0.44 >More info -0.63 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
128 sid2-avrB-6h 0.57 >More info 0.50 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
129 vtc2 (I) -0.60 >More info -0.46 >More info Col (I) rosette Original data GEO bulk
130 mkk1/mkk2 control rep -0.59 >More info -0.47 >More info Col-0 Time 0 rep Original data GEO bulk
131 RPL18 TuMV inoculated total RNA -0.55 >More info -0.50 >More info mock inoculated total RNA PO Original data GEO bulk
132 Salicylic Acid 3 h -0.52 >More info -0.53 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
133 IMI 4mM -0.56 >More info -0.49 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
134 Col whole leaf 1dpi 0.56 >More info 0.49 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
135 WT-NOCO2 INFECTED -0.57 >More info -0.48 >More info WT-MOCK Original data GEO bulk
136 ex1 flu dark 8hours/30 minute light 0.62 >More info 0.42 >More info col dark 8hours/30 minute light Original data GEO bulk
137 aox1a:rpoTmp untreated -0.53 >More info -0.51 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
138 Mutant ga1-5 0.52 >More info 0.52 >More info Ler-1 Original data Comparison of plant hormone related mutant
139 AFB1 0h -0.40 >More info -0.64 >More info Col 0h Leaf Original data GEO bulk
140 upf1 -0.47 >More info -0.57 >More info WT whole plant Original data GEO bulk
141 dense canopy -0.49 >More info -0.55 >More info single (control) petiole Original data GEO bulk
142 Mutant ufo-1(flower) -0.71 >More info -0.32 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
143 psae1-3 stn7-1 -0.56 >More info -0.47 >More info WS rosette leaves Original data GEO bulk
144 pepr1-1 Pepr2-3 +Pep2 2h 0.55 >More info 0.48 >More info WT +Pep2 2h Pep2 Original data GEO bulk
145 abi4 vtc2 (I) -0.58 >More info -0.45 >More info Col (I) rosette Original data GEO bulk
146 RPL18 TuMV inoculated polysomal RNA -0.56 >More info -0.46 >More info mock inoculated polysomal RNA PO Original data GEO bulk
147 npr1 sni1 ssn2 SA 0.66 >More info 0.36 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
148 ARR22-ox 0.54 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
149 CAX1/CAX3 mutant -0.61 >More info -0.41 >More info Col whole plant Original data GEO bulk
150 atgsnor1-1-avrB-6h -0.50 >More info -0.52 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
151 WT 3h -P -0.49 >More info -0.53 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
152 Shoot -Cs -0.38 >More info -0.64 >More info Control-shoot Original data GEO bulk
153 del1-1 mutant 5d uninfected -0.29 >More info -0.73 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
154 toc1-1-49hr -0.57 >More info -0.44 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
155 bio4-1 mutant leaves -0.66 >More info -0.35 >More info WT leaves leaves Original data GEO bulk
156 Mutant sav3-2 (SH) -0.44 >More info -0.57 >More info Col-0 (SH) Original data GEO bulk
157 cpr5npr1svi1 -0.45 >More info -0.56 >More info WT(COL) Original data GEO bulk
158 sav3-2 shade -0.44 >More info -0.57 >More info Col-0 shade seedlings Original data GEO bulk
159 pmr5 pmr6 -0.46 >More info -0.55 >More info Col-0 Original data GEO bulk
160 plant (tga2-5-6) 4h control -0.52 >More info -0.48 >More info plant (Col-0) 4h control Original data GEO bulk
161 ex1ex2flu dark 8hours/30 minute light 0.59 >More info 0.41 >More info col dark 8hours/30 minute light Original data GEO bulk
162 cpr5npr1 -0.61 >More info -0.39 >More info WT(COL) Original data GEO bulk
163 Mutant tga2_5_6 -0.52 >More info -0.48 >More info Col-0 Original data GEO bulk
164 Compost -0.59 >More info -0.41 >More info Perlite Compost Original data GEO bulk
165 +1.6 mM Tween 20 1 h. -0.51 >More info -0.49 >More info +distilled water 1 h. Original data GEO bulk
166 edr1 18 h powdery mildew -0.49 >More info -0.51 >More info Col-0 18 h powdery mildew Original data GEO bulk
167 3x(m) -0.53 >More info -0.46 >More info 2x two week old seedlings Original data
168 LTN008-2 aza-dc -0.58 >More info -0.41 >More info LTN012-2 Mock Original data
169 CMP 24hr -0.50 >More info -0.49 >More info Acetone 24hr root Original data GEO bulk
170 seed germinating in countinuous light 24h SL 0.32 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
171 wrky33 Bc inoculation 14h -0.59 >More info -0.39 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
172 des1 water -0.55 >More info -0.43 >More info WT water water leaf Original data GEO bulk
173 HSP90 Reduced Salk hsp90.2 0.52 >More info 0.46 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
174 GST 4 h (leaf) -0.52 >More info -0.46 >More info Mock 4 h (leaf) Original data Elicitor treatments
175 WT flg22 2h -0.39 >More info -0.59 >More info WT 0h Leaf tissue Original data GEO bulk
176 Leaf systemic -0.48 >More info -0.50 >More info Leaf control vegetative leaf Original data GEO bulk
177 treated group 0.46 >More info 0.52 >More info Control group Original data
178 cat2-long-day 2d 0.59 >More info 0.38 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
179 oxt6 mutant 0.61 >More info 0.36 >More info WT Original data GEO bulk
180 Dark 6h hml 0.65 >More info 0.32 >More info 0h hml Original data
181 upf3 -0.42 >More info -0.55 >More info WT whole plant Original data GEO bulk
182 csn4-1 mutant -0.56 >More info -0.40 >More info WT dark Original data GEO bulk
183 Col-0 SA -0.52 >More info -0.44 >More info Col-0 water complete seedling Original data
184 pepr1-1 Pepr2-3 +Pep2 10h 0.55 >More info 0.41 >More info WT +Pep2 10h Pep2 Original data GEO bulk
185 Time-0 chr11-1chr17-1 0.55 >More info 0.41 >More info Time-0 Col-0 leaf explants Original data
186 eds16 laser microdissected 5 dpi 0.72 >More info 0.24 >More info Col laser microdissected 5 dpi LMD leaf epidermal and mesophyll cells Original data GEO bulk
187 iae1 0.61 >More info 0.35 >More info B179 Original data GEO bulk
188 BI-1-30min IAA 0.68 >More info 0.27 >More info BI-1-0h IAA whole plant Original data GEO bulk
189 brat1 -0.57 >More info -0.38 >More info WT Original data
190 WT mitomycin C -0.57 >More info -0.38 >More info WT mock shoot apical meristem Original data
191 WT 1mM phosphate 8 hours. 0.58 >More info 0.37 >More info WT control (not supplemented). Original data
192 dicamba -0.54 >More info -0.41 >More info WT mock whole seedling Original data GEO bulk
193 brat1nrpe1 -0.30 >More info -0.65 >More info WT Original data
194 toc1-1-85hr -0.56 >More info -0.38 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
195 irradiated leaf (WT 1d) -0.64 >More info -0.30 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
196 SA 24h -0.34 >More info -0.60 >More info EtOH 24h 24hr Original data GEO bulk
197 bio4-1 mutant watered00µM biotin leaves 0.64 >More info 0.29 >More info bio4-1 mutant leaves leaves Original data GEO bulk
198 AFB1 flg22 2h -0.51 >More info -0.41 >More info WT 0h Leaf tissue Original data GEO bulk
199 abh1 -ABA -0.59 >More info -0.33 >More info Col-0 -ABA Original data GEO bulk
200 16C 4hs 0.51 >More info 0.40 >More info L22-4hrs whole plant excluding roots Original data GEO bulk
201 Dark 6h wt 0.64 >More info 0.27 >More info 0h wt Original data
202 edr1 96 h powdery mildew 0.66 >More info 0.24 >More info Col-0 96 h powdery mildew Original data GEO bulk
203 epiF3 0.50 >More info 0.40 >More info WT Col-0 aerial part Original data
204 PAHs stress -0.54 >More info -0.36 >More info exp control phenanthrene whole plants Original data GEO bulk
205 toc1-1-53hr -0.55 >More info -0.35 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
206 coi1-2 -0.38 >More info -0.52 >More info Col-0 mock Whole seedling Original data GEO bulk
207 CMP 4hr -0.40 >More info -0.50 >More info Acetone 4hr root Original data GEO bulk
208 KO-nudx19 leaves -0.57 >More info -0.33 >More info WT leaves rosette leaves Original data
209 pho1 -0.55 >More info -0.34 >More info Col2WT Original data GEO bulk
210 irradiated leaf (cmt 1d) -0.53 >More info -0.36 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
211 0h hml -0.66 >More info -0.23 >More info 0h wt Original data
212 Senescing leaf -0.62 >More info -0.27 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
213 pmr5 -0.38 >More info -0.51 >More info Col-0 Original data GEO bulk
214 Te 1d 0.39 >More info 0.50 >More info Te CA Leaves Original data
215 toc1-1-89hr -0.54 >More info -0.34 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
216 cov1 cov2 stem Base -0.61 >More info -0.27 >More info WT stem Base stem Base Original data GEO bulk
217 WT leaves - Fe -0.61 >More info -0.27 >More info WT leaves + Fe Leaves Original data GEO bulk
218 coi1-16 ein2 sid2 ozone -0.50 >More info -0.38 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
219 expressing C2 MeJA 0.51 >More info 0.37 >More info LUC2T Original data GEO bulk
220 tbf1-mock infiltration 0.51 >More info 0.37 >More info WT-mock infiltration water for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
221 Chitin -0.58 >More info -0.30 >More info Col C Original data GEO bulk
222 SA 3h -0.31 >More info -0.56 >More info EtOH 3h 3hr Original data GEO bulk
223 Mutant clv3-7(flower) 0.61 >More info 0.26 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
224 rpoTmp(line) MLD stressed -0.28 >More info -0.59 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
225 Mutant ag-12(flower) -0.69 >More info -0.18 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
226 Homozygous-AtcesA6 0.57 >More info 0.30 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
227 AtLysM RLK1 mutant water -0.54 >More info -0.32 >More info WT water Original data GEO bulk
228 C24 UV1 0.65 >More info 0.21 >More info C24 mock UV seedling Original data
229 SLWF infested -0.62 >More info -0.24 >More info SLWF uninfested rosette tissue Original data GEO bulk
230 rosette leaves bdg 0.22 >More info 0.64 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
231 SA 4mM -0.57 >More info -0.29 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
232 TaFLS overexpression line (OE1) 0.67 >More info 0.18 >More info Col-0 Rosette leaves Original data
233 csn4-1 dark -0.65 >More info -0.20 >More info WT light Original data GEO bulk
234 pab total -0.57 >More info -0.28 >More info WT total seedling shoot/aerial seedling Original data
235 sid2 0.52 >More info 0.32 >More info Col rosettes Original data GEO bulk
236 ex2 flu dark 8hours/30 minute light 0.54 >More info 0.30 >More info col dark 8hours/30 minute light Original data GEO bulk
237 Shoot apex inflorescence (after bolting) 0.19 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
238 Cd 24h root 0.61 >More info 0.23 >More info WT-Untreated Shoot Original data GEO bulk
239 protoplasts T1 [flg22] -0.30 >More info -0.53 >More info protoplasts T1 [CPK] mesophyll protoplasts Original data GEO bulk
240 Light 3day hml 0.61 >More info 0.22 >More info 0h hml Original data
241 FOX line K19624 -0.63 >More info -0.19 >More info empty vector control (T3) FOX lines Original data GEO bulk
242 35:SUB1A -0.61 >More info -0.21 >More info WT whole seedling Original data GEO bulk
243 cat2-short-day 4d 0.57 >More info 0.25 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
244 D2O -0.62 >More info -0.19 >More info H2O seedling Original data GEO bulk
245 46T-Dry -0.25 >More info -0.56 >More info WT-Dry dehydration treatment 1h Original data
246 Seedling KUA1-IOX est -0.29 >More info -0.52 >More info Seedling KUA1-IOX mock Original data
247 psad1-1 stn7-1 0.53 >More info 0.27 >More info Col-0 rosette leaves Original data GEO bulk
248 Heat shock optimum 0.15 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
249 scrm-D:mute -0.58 >More info -0.22 >More info Col-0 WT whole seedling Original data GEO bulk
250 Infected Col-0 leaf -0.51 >More info -0.28 >More info Mock Col-0 leaf F. oxysporum leaf Original data GEO bulk
251 auxin and brassinazole seedlings -0.52 >More info -0.27 >More info auxin seedlings Original data GEO bulk
252 ASL9-ox -0.62 >More info -0.17 >More info WT aerial parts of seedlings Original data GEO bulk
253 arp6-10 12 ºC -0.26 >More info -0.53 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
254 ORE1-IOE-2h+Est -0.24 >More info -0.55 >More info ORE1-IOE-2h+Mock Estradiol Whole seedling Original data GEO bulk
255 abh1 +ABA -0.55 >More info -0.23 >More info Col-0 +ABA Original data GEO bulk
256 nas4x leaves - Fe 0.56 >More info 0.22 >More info WT leaves - Fe Leaves Original data GEO bulk
257 HARAP aerobic 0.28 >More info 0.50 >More info WT aerobic aerobic Original data GEO bulk
258 FOX line K16331 -0.61 >More info -0.16 >More info empty vector control (T3) FOX lines Original data GEO bulk
259 vtc1-1 -0.51 >More info -0.26 >More info Col-0 whole plant Original data GEO bulk
260 cat2-2; harvested 8h continiously maintained in
high CO2;		 0.55 >More info 0.22 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
261 seedlings +5AC -0.52 >More info -0.24 >More info control seedlings 10-day old whole seedling Original data GEO bulk
262 sid2-2 24hpi A. brassicicola 0.65 >More info 0.11 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
263 penta Pst DC3000 12hpi -0.55 >More info -0.21 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
264 WT +Pep2 10h -0.52 >More info -0.24 >More info WT untreated Pep2 Original data GEO bulk
265 Bur-0-1h IAA -0.50 >More info -0.26 >More info Bur-0h IAA whole plant Original data GEO bulk
266 35SAvr -0.51 >More info -0.24 >More info Ecotype Col Original data GEO bulk
267 seedlings by volatiles from leafminer damaged
Lima bean 24h		 0.56 >More info 0.19 >More info seedlings by volatiles from healthy Lima bean 24h leaves Original data GEO bulk
268 wrky72-1-MOCK 0.61 >More info 0.14 >More info WT-MOCK Original data GEO bulk
269 cat2-long-day 4d 0.63 >More info 0.12 >More info Col0-LD4 transferred to air (400 ppm) for 4 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
270 coi1-2 JA -0.24 >More info -0.51 >More info JA Whole seedling Original data GEO bulk
271 Dark 1day hml 0.53 >More info 0.21 >More info 0h hml Original data
272 cat2-2; 8h switch to ambient CO2 concentrations; -0.52 >More info -0.22 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
273 E2Fa-Dpa -0.57 >More info -0.17 >More info WT Original data GEO bulk
274 atr mitomycin C 0.51 >More info 0.23 >More info WT mitomycin C shoot apical meristem Original data
275 apum23 -0.53 >More info -0.21 >More info WT (Col-3) aerial parts Original data GEO bulk
276 Col whole leaf 3dpi -0.17 >More info -0.57 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
277 Leafminer damaged seedlings 0.18 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
278 9m.KCl -0.21 >More info -0.52 >More info To. KCl 14 day old Roots Original data GEO bulk
279 nhx5-2/nhx6 -0.56 >More info -0.15 >More info WT Rosette leaf Original data GEO bulk
280 MYB51 OE 0.53 >More info 0.18 >More info WT for ATR1/MYB51 Original data GEO bulk
281 til1-1 22C -0.50 >More info -0.21 >More info Col-0 22C Original data GEO bulk
282 glk1 glk2 GLK1-GR +DEX 24h 0.60 >More info 0.11 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
283 46T-CK -0.08 >More info -0.63 >More info WT-CK none Original data
284 pab polysome -0.50 >More info -0.20 >More info WT polysome seedling shoot/aerial seedling Original data
285 sfr2 control -0.52 >More info -0.17 >More info WT control All aerial tissue Original data GEO bulk
286 SCR 24hr-S -0.17 >More info -0.52 >More info SCR 0hr endodermis Original data
287 calcicole ecotype Cal-0 -0.59 >More info -0.10 >More info Col-4 1 mM CaCl2 Original data GEO bulk
288 nhx5 -0.55 >More info -0.13 >More info WT Rosette leaf Original data GEO bulk
289 npr1-3 MOCK 48h 0.50 >More info 0.18 >More info Col-0 MOCK 48h Original data GEO bulk
290 4C 7d -0.55 >More info -0.12 >More info 4C 0h Original data GEO bulk
291 AsAKiin11 T1 -0.54 >More info -0.13 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
292 rdr6-15 -0.66 >More info -0.01 >More info Col-0 plant inflorescence Original data
293 ddm1 F6 inflorescence -0.64 >More info -0.03 >More info wt Col inflorescence unopened flower buds Original data
294 wrky72-2-MOCK 0.57 >More info 0.10 >More info WT-MOCK Original data GEO bulk
295 ape2 high light -0.61 >More info -0.06 >More info Ws-2 high light Original data GEO bulk
296 cat2-2; 0h switch to ambient CO2 concentrations; 0.53 >More info 0.13 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
297 4h decapitation 0.54 >More info 0.12 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
298 SCR 48hr-S -0.14 >More info -0.52 >More info SCR 0hr endodermis Original data
299 bri1-116 -0.07 >More info 0.73 >More info Col seedling Original data GEO bulk
300 Dry pre-dawn -0.07 >More info -0.56 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
301 ataf1-1 mutant Col-0 Un-inoculated 0.52 >More info 0.11 >More info WT Col-0 Un-inoculated Original data GEO bulk
302 12h Col-0 -0.51 >More info -0.12 >More info 00h Col-0 Original data GEO bulk
303 4C 2h(SOIL) -0.51 >More info -0.11 >More info 4C 0h(SOIL) Original data GEO bulk
304 C24-1h IAA -0.53 >More info -0.08 >More info C24-0h IAA whole plant Original data GEO bulk
305 SA Treated -0.69 >More info 0.08 >More info Water Original data GEO bulk
306 vte2 leaves 120h LT -0.65 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
307 GA3 0.5 h (ga1) 0.11 >More info 0.50 >More info Mock 0.5 h (ga1) Original data Basic hormone treatment of seedlings
308 HSP90 Reduced Salk hsp90.3 0.59 >More info -0.01 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
309 Dark 2day ivd 0.59 >More info -0.01 >More info 0h ivd Original data
310 2hr continuous KNO3 PeR cell 0.00 >More info 0.58 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
311 Shoot -P 0.50 >More info 0.07 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
312 hda9 dryseed -0.51 >More info -0.06 >More info Col dryseed dry seeds Original data
313 nas4x leaves + Fe -0.51 >More info -0.06 >More info WT leaves + Fe Leaves Original data GEO bulk
314 opr3 OPDA 0.5 h -0.05 >More info -0.52 >More info opr3 0 h Original data GEO bulk
315 tcp13 0.04 >More info 0.53 >More info WT inflorescences Original data GEO bulk
316 35S::IaTCP -0.53 >More info -0.03 >More info thaliana control secondary inflorescence Original data
317 Dark 2day hml 0.52 >More info 0.04 >More info 0h hml Original data
318 aln-1 0.55 >More info 0.01 >More info Col-0 Aerial part of seedlings Original data
319 rao1-2 -0.52 >More info -0.04 >More info Col-Luc WT mock water control treatment 3 hours whole green tissue Original data GEO bulk
320 Polysomal RNA 35S:HF-RPL18 cold -0.62 >More info 0.07 >More info Polysomal RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
321 FarRed Light 45min -0.05 >More info 0.60 >More info White Light 45min Original data Light treatments
322 tt4 0.54 >More info -0.00 >More info WT aerial region Original data GEO bulk
323 Mutant ap3-6(flower) -0.55 >More info 0.01 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
324 gapcp1gapcp2 ABA -0.13 >More info 0.66 >More info WT ABA ABA seedling Original data GEO bulk
325 mkk1 24h BTH rep -0.03 >More info 0.54 >More info Col-0 24h BTH rep Original data GEO bulk
326 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
327 Total RNA 35S:HF-RPL18 cold -0.76 >More info 0.27 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
328 Mutant lfy-12(flower) -0.54 >More info 0.07 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
329 xrn4-5 flower 0.52 >More info -0.05 >More info Col-0 flower inflorescence Original data GEO bulk
330 coi1 -0.51 >More info 0.04 >More info Col-0 Leaves Original data GEO bulk
331 IAA7mII over-expressor IAA Treated -0.22 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
332 roottip hypoxia pSCR 0.05 >More info -0.51 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
333 WT (Ler) CK25 -0.05 >More info 0.51 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
334 rrd2 IBA -0.04 >More info 0.50 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
335 35S:miR396 -0.14 >More info 0.57 >More info WT 0 days-old seedlings. Original data GEO bulk
336 Indigo Carmine 0.5 uM -0.11 >More info 0.53 >More info Control MV and IC Indigo Carmine Original data
337 Laer pretreat GA Flg22 1h -0.29 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
338 Red/FR Light45min 0.20 >More info -0.61 >More info FarRed Light 45min Original data Light treatments
339 Blue Light 45 min -0.12 >More info 0.52 >More info White Light 45min Original data Light treatments
340 Col0-PsmES4326-24hpi -0.31 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
341 siliques AtHb1 control -0.31 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
342 control leaf (cmt 1d) -0.54 >More info 0.35 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
343 WT +Pep2 2h -0.50 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
344 anti-sense for AtAOX1a -0.51 >More info 0.37 >More info WT Original data GEO bulk
345 Col BTH -0.72 >More info 0.67 >More info Col rosettes Original data GEO bulk