4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on AtLysM RLK1 mutant water
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "AtLysM RLK1 mutant water"  Help Download transcriptome of top 30
Score Experiment Correlation from
AtLysM RLK1 mutant water		 Correlation to
AtLysM RLK1 mutant water		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 AtLysM RLK1 mutant water 1.00 >More info 1.00 >More info WT water Original data GEO bulk
2 csn5 (csn5a-2 csn5b) dark 0.74 >More info 0.73 >More info WT dark Original data GEO bulk
3 csn4-1 mutant 0.75 >More info 0.71 >More info WT dark Original data GEO bulk
4 csn3-1 dark 0.73 >More info 0.70 >More info WT dark Original data GEO bulk
5 toc1-1-85hr 0.61 >More info 0.76 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
6 phr1 Shoot-Pi 0.66 >More info 0.70 >More info WT Root-Pi shoots Original data GEO bulk
7 phr1 phl1 Root-Pi -0.66 >More info -0.70 >More info WT Shoot+Pi roots Original data GEO bulk
8 BLM 0.64 >More info 0.66 >More info CK BLM seedling Original data
9 toc1-1-81hr 0.61 >More info 0.69 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
10 Mutant axr3-1 0.60 >More info 0.69 >More info Col Original data GEO bulk
11 BLM+INA 0.63 >More info 0.65 >More info CK BLM and INA seedling Original data
12 Col-0 low oxygen -0.63 >More info -0.63 >More info Col-0 Original data GEO bulk
13 bbx24 in Simulated Shade -0.53 >More info -0.72 >More info WT in simulated shade shade seedling Original data
14 Mutant nph4-1_arf19-1 0.60 >More info 0.65 >More info Col Original data GEO bulk
15 SA 0.57 >More info 0.68 >More info WT mock Whole seedling Original data GEO bulk
16 sdg2 0.66 >More info 0.58 >More info wt seedling Original data GEO bulk
17 toc1-1-57hr 0.52 >More info 0.72 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
18 csn3-1 light 0.67 >More info 0.55 >More info WT light Original data GEO bulk
19 cop1 Seedling BL 0.58 >More info 0.64 >More info WT Seedling BL Original data GEO bulk
20 Chemically 0.51 >More info 0.70 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
21 csn5 (csn5a-2 csn5b) light 0.64 >More info 0.55 >More info WT light Original data GEO bulk
22 Mutant axr3-1 (IAA) 0.47 >More info 0.71 >More info Col (IAA) Original data GEO bulk
23 cop1 Seedling BL+ABA 0.57 >More info 0.59 >More info WT Seedling BL+ABA Original data GEO bulk
24 DUO1 induced 24h 0.56 >More info 0.59 >More info 24hr-not-induced whole plant Original data GEO bulk
25 cdpk6-yfp 0.52 >More info 0.63 >More info Kan seedlings Original data GEO bulk
26 seedling 24h after Gamma atm-1 0.56 >More info 0.59 >More info seedling day 2 unirradiated atm-1 24h Original data
27 Mutant ga1-5 -0.61 >More info -0.52 >More info Ler-1 Original data Comparison of plant hormone related mutant
28 atmyc2 cop1 Seedling BL 0.60 >More info 0.53 >More info WT Seedling BL Original data GEO bulk
29 GR-REV 30min 0.59 >More info 0.53 >More info Col 30min Original data GEO bulk
30 CabpBVR2 -0.53 >More info -0.59 >More info WT Original data GEO bulk
31 35S:LOB-GR mock 0.55 >More info 0.56 >More info Col mock mock seedling Original data GEO bulk
32 R. solani AG2-1 0.56 >More info 0.54 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
33 35SpBVR3 -0.48 >More info -0.62 >More info WT Original data GEO bulk
34 sni1 0.47 >More info 0.63 >More info WT Original data GEO bulk
35 R. solani AG8 0.54 >More info 0.55 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
36 mp-B4149 mutant IAA 0.55 >More info 0.54 >More info GR-bdl IAA Original data GEO bulk
37 Col-0 Root 100 mM ATP 30 min 0.51 >More info 0.58 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
38 seedling 24h after Gamma WT 0.52 >More info 0.57 >More info seedling day 2 unirradiated WT 24h Original data
39 WT chitooctaose 0.65 >More info 0.43 >More info WT water Original data GEO bulk
40 aba2 1% sucrose 12-day-old -0.46 >More info -0.62 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
41 hira-root -0.51 >More info -0.56 >More info WT-root root Original data
42 erf5 erf6 +chitooctaose -0.47 >More info -0.60 >More info WT+chitooctaose chitooctaose seedlings Original data GEO bulk
43 AtLysM RLK1 mutant chitooctaose 0.59 >More info 0.47 >More info WT chitooctaose Original data GEO bulk
44 WT hypoxia -0.38 >More info -0.68 >More info WT normoxia whole rosette Original data
45 Whole root - low pH 24H 0.45 >More info 0.60 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
46 ptpks2 0.44 >More info 0.60 >More info Col-WT leaves Original data GEO bulk
47 ubc13A -Fe -0.41 >More info -0.62 >More info Col -Fe root Original data GEO bulk
48 bri1-116 0.29 >More info 0.73 >More info Col seedling Original data GEO bulk
49 Mutant sav3-2 (WL) 0.43 >More info 0.58 >More info Col-0 (WL) Original data GEO bulk
50 atmyc2 cop1 Seedling Dark 0.48 >More info 0.53 >More info WT Seedling Dark Original data GEO bulk
51 WT light 0.47 >More info 0.54 >More info WT dark Original data GEO bulk
52 sav3-2 light 0.43 >More info 0.58 >More info Col-0 light seedlings Original data GEO bulk
53 MG132 3 h 0.44 >More info 0.56 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
54 toc1-1-73hr 0.40 >More info 0.60 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
55 L2.4 mutant 0.45 >More info 0.55 >More info Wt Original data GEO bulk
56 Day Time Treatment 0.40 >More info 0.60 >More info Day Time Control 1hr white light pulse aerial rosette Original data
57 ice1 6H Cold 0.57 >More info 0.42 >More info WT 6H Cold Original data GEO bulk
58 ahg2-1 0.51 >More info 0.48 >More info WT (Col) control Original data GEO bulk
59 Chitosan 3h Treatment 0.46 >More info 0.53 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
60 dicamba 0.46 >More info 0.53 >More info WT mock whole seedling Original data GEO bulk
61 Shoot dark control 24h -0.37 >More info -0.62 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
62 rsa1 salt 0 h 0.48 >More info 0.51 >More info WT salt 0 h Control seedlings Original data GEO bulk
63 ahg2-1sid2-2 0.40 >More info 0.58 >More info WT (Col) control Original data GEO bulk
64 toc1-1-53hr 0.41 >More info 0.57 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
65 sfr3 control 0.39 >More info 0.59 >More info WT control All aerial tissue Original data GEO bulk
66 seedling 1.5h after Gamma WT 0.43 >More info 0.55 >More info seedling day 1 unirradiated WT 1.5h Original data
67 Col-0 overexpressing At1g54160 control 0.50 >More info 0.47 >More info WT no treatement Original data GEO bulk
68 At1g54160 ox 0.50 >More info 0.47 >More info Col-0 Original data GEO bulk
69 E2Fa-Dpa 0.55 >More info 0.41 >More info WT Original data GEO bulk
70 OXUPB1-2 meristematic zone 0.44 >More info 0.52 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
71 Col-0 WT HL 3h 0.46 >More info 0.50 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
72 Root -Cs 0.37 >More info 0.58 >More info Control-root Original data GEO bulk
73 WT Seedling BL 0.41 >More info 0.53 >More info WT Seedling Dark Original data GEO bulk
74 arr-BA-sample 0.43 >More info 0.51 >More info Wt-BA-sample seedling Original data
75 seedling 3h after Gamma WT 0.37 >More info 0.57 >More info seedling day 1 unirradiated WT 3h Original data
76 35:SUB1C -0.35 >More info -0.58 >More info WT whole seedling Original data GEO bulk
77 GR-REV 60min 0.53 >More info 0.39 >More info Col 60min Original data GEO bulk
78 BR 0.50 >More info 0.42 >More info WT-mock BR dark-grown seedlings Original data GEO bulk
79 Light 4h polysome-bound 0.34 >More info 0.58 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
80 Oxidative Stress 3 h (root) -0.55 >More info -0.36 >More info Stress mock 3 h (root) Original data Stress treatments
81 Whole root - low pH 12H 0.35 >More info 0.56 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
82 low CO2 + dark -0.28 >More info -0.63 >More info normal CO2 + light Original data GEO bulk
83 Shoot submergence 24h -0.33 >More info -0.58 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
84 Pseudomonas -0.35 >More info -0.55 >More info Control pseudomonas treated whole seedling Original data GEO bulk
85 phyABDE Rc50 0.28 >More info 0.62 >More info phyABDE Dark red light whole seedling Original data GEO bulk
86 afb3-1 2h KNO3 0.40 >More info 0.50 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
87 Shoot dark control 7h -0.31 >More info -0.59 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
88 irradiated leaf (WT 5d) 0.17 >More info 0.72 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
89 Octopus overexpressor 35SDYG25 0.32 >More info 0.57 >More info WS Original data GEO bulk
90 erf5 erf6 -0.56 >More info -0.32 >More info WT+water water seedlings Original data GEO bulk
91 Imidazolinone EC50 0.52 >More info 0.36 >More info Carrier (Imidazolinone) Original data GEO bulk
92 Dark 4 h pls UV-AB 5min 0.36 >More info 0.52 >More info Dark 4 h Original data Light treatments
93 inhibitor B Treated 0.36 >More info 0.52 >More info Negative Control Original data GEO bulk
94 Light 4h steady-state 0.31 >More info 0.57 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
95 Mutant sav3-2 (SH) 0.31 >More info 0.56 >More info Col-0 (SH) Original data GEO bulk
96 WT Red light 18h 0.33 >More info 0.54 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
97 sav3-2 shade 0.31 >More info 0.56 >More info Col-0 shade seedlings Original data GEO bulk
98 Col-0 shade -0.19 >More info -0.68 >More info Col-0 light seedlings Original data GEO bulk
99 iae1 -0.36 >More info -0.51 >More info B179 Original data GEO bulk
100 Mutant NahG(leaf) -0.32 >More info -0.54 >More info Col-0 (leaf) Original data GEO bulk
101 root control pGL2 0.34 >More info 0.52 >More info root control total control root Original data GEO bulk
102 low R/FR mock spray -0.32 >More info -0.54 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
103 Col BTH 0.19 >More info 0.67 >More info Col rosettes Original data GEO bulk
104 long 17-degree- 0.23 >More info 0.63 >More info control long Original data GEO bulk
105 M6PR transgenic leaf 0mM NaCl -0.36 >More info -0.50 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
106 root epidermis and lateral root cap pH4.6 0.36 >More info 0.50 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
107 Whole root - S 12H 0.27 >More info 0.59 >More info Whole root - S 0H Original data GEO bulk
108 Cs shoot -0.28 >More info -0.58 >More info control shoot Original data GEO bulk
109 long 14-degree- 0.29 >More info 0.57 >More info control long Original data GEO bulk
110 aba3-1 0.29 >More info 0.57 >More info wt Original data GEO bulk
111 SCL3 OE -0.50 >More info -0.35 >More info Col-0 whole root Original data GEO bulk
112 6h +Pi -0.28 >More info -0.57 >More info 6h -Pi root Original data GEO bulk
113 1 h Light Total RNA 0.26 >More info 0.59 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
114 ice1 control 0.58 >More info 0.26 >More info WT control Original data GEO bulk
115 Red/FR Light45min -0.23 >More info -0.61 >More info FarRed Light 45min Original data Light treatments
116 DUO1 induced 12h 0.27 >More info 0.57 >More info 12hr-not-induced whole plant Original data GEO bulk
117 toc1-1-77hr 0.32 >More info 0.51 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
118 sta1 0.57 >More info 0.26 >More info WT Original data GEO bulk
119 nia1nia2 0.50 >More info 0.32 >More info Col-0 whole seedlings Original data GEO bulk
120 WT Rc50 0.28 >More info 0.54 >More info WT Dark red light whole seedling Original data GEO bulk
121 1 h Light IP RNA 0.26 >More info 0.56 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
122 phyB mutant 22C 10hrs -0.25 >More info -0.57 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
123 WT(Ler) Rc50 0.25 >More info 0.57 >More info WT(Ler) Dark Original data GEO bulk
124 WT(Ler) Rc15 0.23 >More info 0.58 >More info WT(Ler) Dark Original data GEO bulk
125 petiole in FRD -0.24 >More info -0.56 >More info petiole in WL petioles Original data GEO bulk
126 Starch sheath 5 days MS incubation 0.27 >More info 0.53 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
127 Shoot apex inflorescence (after bolting) 0.14 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
128 Blue Light 4 h 0.24 >More info 0.55 >More info White Light 4 h Original data Light treatments
129 LTN008-2 aza-dc 0.51 >More info 0.27 >More info LTN012-2 Mock Original data
130 FarRed Light 4 h 0.22 >More info 0.56 >More info White Light 4 h Original data Light treatments
131 30m light 0.28 >More info 0.50 >More info before light whole seedlings Original data GEO bulk
132 rsa3-1 Na 24h 0.25 >More info 0.53 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
133 irradiated leaf (WT 1d) 0.22 >More info 0.56 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
134 NahG -0.16 >More info -0.62 >More info Col-0 Leaves Original data GEO bulk
135 Mutant arf2-6 (IAA) 0.25 >More info 0.51 >More info Col (IAA) Original data GEO bulk
136 mkk1 24h BTH rep -0.24 >More info -0.52 >More info Col-0 24h BTH rep Original data GEO bulk
137 IAA7mII over-expressor IAA Treated 0.07 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
138 TNT-seedlings 0.25 >More info 0.51 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
139 etiolated cop1BBX22-GFPox 0.24 >More info 0.52 >More info etiolated Col-0 whole seedlings Original data GEO bulk
140 root - 08% oxygen - 2h -0.11 >More info -0.64 >More info root - 21% oxygen - 2h Original data GEO bulk
141 aerial organ callus inducing medium 96 h -0.24 >More info -0.51 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
142 DUO1 induced 6h 0.20 >More info 0.54 >More info 6hr-not-induced whole plant Original data GEO bulk
143 line J1551-5 days control + 2 days salt s 0.22 >More info 0.52 >More info line J1551-7 days-control Original data
144 irradiated leaf (cmt 1d) 0.21 >More info 0.52 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
145 Red/FR Light 4 h -0.22 >More info -0.50 >More info FarRed Light 4 h Original data Light treatments
146 low R/FR JA spray -0.21 >More info -0.51 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
147 Col0-PsmES4326-24hpi 0.10 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
148 Heat shock optimum 0.05 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
149 root - 04% oxygen - 2h -0.13 >More info -0.57 >More info root - 21% oxygen - 2h Original data GEO bulk
150 agb1 gpa1 +ABA GC 0.19 >More info 0.50 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
151 tmm1-inflorescence-tips 0.13 >More info 0.55 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
152 Dark 4 h pls RedLight 1min 0.18 >More info 0.50 >More info Dark 4 h Original data Light treatments
153 seed germinating in countinuous light 24h SL 0.00 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
154 root - 08% oxygen - 30min -0.15 >More info -0.51 >More info root - 21% oxygen - 30min Original data GEO bulk
155 pif4pif5 mut dark 0.04 >More info 0.62 >More info WT dark Original data GEO bulk
156 cngc19 -0.50 >More info -0.15 >More info Col-0 root Original data GEO bulk
157 EBE-XVE +estradiol 0.12 >More info 0.52 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
158 Leafminer damaged seedlings 0.08 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
159 ANOXIA 0.02 >More info -0.65 >More info ANOXIA+SUCROSE Original data GEO bulk
160 siliques AtHb1 control 0.11 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
161 35S:VND7-VP16-GR+CHX -0.12 >More info -0.51 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
162 toc1-1-89hr 0.51 >More info 0.11 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
163 INA 0.12 >More info 0.50 >More info CK INA seedling Original data
164 cpctry 0.07 >More info 0.54 >More info Col Original data GEO bulk
165 ms35 silique stage 7 0.02 >More info 0.56 >More info Ler 6.7 anther and filament Original data GEO bulk
166 NaCl cpctry 0.00 >More info 0.53 >More info NaCl Col Original data GEO bulk
167 Laer pretreat GA Flg22 1h -0.24 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
168 E.coli 0157 H7 7h 0.04 >More info -0.50 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
169 CCA1-ox 6am non-polysomal -0.06 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
170 non-polysome mRNA eif3k 0.24 >More info -0.51 >More info non-polysome mRNA WT aerial part Original data GEO bulk