4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on toc1-1-73hr
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List of experiments correlated with "toc1-1-73hr"  Help Download transcriptome of top 30
Score Experiment Correlation from
toc1-1-73hr		 Correlation to
toc1-1-73hr		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 toc1-1-73hr 1.00 >More info 1.00 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
2 toc1-1-53hr 0.91 >More info 0.90 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
3 toc1-1-49hr 0.94 >More info 0.84 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
4 toc1-1-77hr 0.88 >More info 0.87 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
5 toc1-1-93hr 0.87 >More info 0.86 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
6 toc1-1-69hr 0.87 >More info 0.85 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
7 toc1-1-57hr 0.86 >More info 0.82 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
8 toc1-1-81hr 0.76 >More info 0.85 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
9 toc1-1-85hr 0.72 >More info 0.81 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
10 Chitosan 3h Treatment 0.75 >More info 0.68 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
11 WT-16ºC -0.72 >More info -0.68 >More info WT-23ºC Original data GEO bulk
12 Nicotinamide-73hr 0.72 >More info 0.66 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
13 WT 30μM arsenate 8 hours. 0.74 >More info 0.63 >More info WT control (not supplemented). Original data
14 wavy 0.67 >More info 0.69 >More info WT Original data GEO bulk
15 AgNO3 3 h 0.69 >More info 0.67 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
16 Leafminer systemically damaged thaliana seedlings 0.68 >More info 0.67 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
17 phr1 Shoot-Pi 0.73 >More info 0.61 >More info WT Root-Pi shoots Original data GEO bulk
18 toc1-1-65hr 0.70 >More info 0.63 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
19 Mutant axr3-1 (IAA) 0.66 >More info 0.66 >More info Col (IAA) Original data GEO bulk
20 toc1-1-61hr 0.65 >More info 0.66 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
21 Chemically 0.62 >More info 0.68 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
22 4h decapitation -0.64 >More info -0.66 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
23 phr1 phl1 Root-Pi -0.75 >More info -0.54 >More info WT Shoot+Pi roots Original data GEO bulk
24 R. solani AG8 0.65 >More info 0.62 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
25 iae1 -0.68 >More info -0.59 >More info B179 Original data GEO bulk
26 TNT-seedlings 0.47 >More info 0.80 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
27 vtc2 (I) 0.60 >More info 0.66 >More info Col (I) rosette Original data GEO bulk
28 Root dark control 7h 0.72 >More info 0.53 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
29 R. solani AG2-1 0.63 >More info 0.62 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
30 Root dark control 24h 0.74 >More info 0.51 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
31 OH1 0.66 >More info 0.59 >More info Col-0 leaves Original data GEO bulk
32 P.syringae vir 4 h (leaf) 0.58 >More info 0.67 >More info Mock 4 h (leaf) Original data Elicitor treatments
33 Nicotinamide-49hr 0.68 >More info 0.56 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
34 SA 0.63 >More info 0.60 >More info WT mock Whole seedling Original data GEO bulk
35 vte1-1 3d vernalization -0.71 >More info -0.51 >More info WT 3d vernalization Original data GEO bulk
36 35:SUB1C -0.66 >More info -0.55 >More info WT whole seedling Original data GEO bulk
37 WT Na2S -0.52 >More info -0.69 >More info WT water Na2S leaf Original data GEO bulk
38 Nicotinamide-93hr 0.63 >More info 0.58 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
39 5-Triiodobenzoic acid3 h 0.65 >More info 0.55 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
40 plant (tga2-5-6) 4h phytoprostane A1 0.64 >More info 0.55 >More info plant (tga2-5-6) 4h control Original data GEO bulk
41 cca1-lhy before light 0.48 >More info 0.70 >More info before light whole seedlings Original data GEO bulk
42 4C 1h 0.72 >More info 0.45 >More info 4C 0h Original data GEO bulk
43 bri1-116 0.44 >More info 0.73 >More info Col seedling Original data GEO bulk
44 OsRLCK253 expressing -0.62 >More info -0.54 >More info WT seedlings Original data GEO bulk
45 DUO1 induced 24h 0.68 >More info 0.47 >More info 24hr-not-induced whole plant Original data GEO bulk
46 Root submergence 24h 0.69 >More info 0.46 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
47 atmyc2 cop1 Seedling Dark 0.75 >More info 0.39 >More info WT Seedling Dark Original data GEO bulk
48 AFB1 0h 0.56 >More info 0.58 >More info Col 0h Leaf Original data GEO bulk
49 cdpk6-yfp 0.66 >More info 0.48 >More info Kan seedlings Original data GEO bulk
50 BLM+INA 0.66 >More info 0.48 >More info CK BLM and INA seedling Original data
51 mutant acs6E (single mutant) -0.69 >More info -0.45 >More info col control (single mutant) Original data GEO bulk
52 noa1-2 0.67 >More info 0.46 >More info Col-0 whole seedlings Original data GEO bulk
53 Nicotinamide-65hr 0.68 >More info 0.45 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
54 cpr5scv1 0.50 >More info 0.63 >More info WT(COL) Original data GEO bulk
55 3d old, both 10mM sucrose and 0.2µM SMX -0.66 >More info -0.47 >More info control Whole seedling Original data GEO bulk
56 Heat shock optimum 0.48 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
57 Leafminer damaged seedlings 0.56 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
58 GR-REV 30min 0.67 >More info 0.45 >More info Col 30min Original data GEO bulk
59 OXUPB1-2 meristematic zone 0.65 >More info 0.47 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
60 Root submergence 7h 0.66 >More info 0.46 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
61 cca1-lhy 60m light 0.49 >More info 0.63 >More info 60m light whole seedlings Original data GEO bulk
62 abi4-102 (I) 0.48 >More info 0.64 >More info Col (I) rosette Original data GEO bulk
63 anti-sense for AtAOX1a 0.56 >More info 0.55 >More info WT Original data GEO bulk
64 10mM sucrose -0.67 >More info -0.44 >More info control Whole seedling Original data GEO bulk
65 24h volatiles Sp. HRO-C48 0.54 >More info 0.57 >More info 24h untreated whole seedling Original data GEO bulk
66 Phytoprostane A1 4 h 0.59 >More info 0.51 >More info Col-0 Original data GEO bulk
67 mutant-line348 -0.54 >More info -0.56 >More info WT-control whole plant Original data GEO bulk
68 P.p 30hai 0.70 >More info 0.40 >More info At-Control roots Original data GEO bulk
69 seedling 1.5h after HZE WT 0.64 >More info 0.45 >More info seedling day 1 unirradiated WT 1.5h Original data
70 seedling 1.5h after HZE atm-1 0.56 >More info 0.53 >More info seedling day 1 unirradiated atm-1 1.5h Original data
71 dicamba 0.67 >More info 0.42 >More info WT mock whole seedling Original data GEO bulk
72 root hypoxia pPEP 0.58 >More info 0.51 >More info root hypoxia total hypoxia root Original data GEO bulk
73 abi4 vtc2 (I) 0.50 >More info 0.59 >More info Col (I) rosette Original data GEO bulk
74 max3GR24 (1 uM) -0.61 >More info -0.47 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
75 erf5 erf6 -0.64 >More info -0.44 >More info WT+water water seedlings Original data GEO bulk
76 Mutant axr3-1 0.59 >More info 0.49 >More info Col Original data GEO bulk
77 TAMM27 roots 2hr KNO3 nitrogen 0.69 >More info 0.39 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
78 DUO1 induced 12h 0.65 >More info 0.43 >More info 12hr-not-induced whole plant Original data GEO bulk
79 mutant acs2B (single mutant) -0.69 >More info -0.39 >More info col control (single mutant) Original data GEO bulk
80 Atss3 Light1 -0.47 >More info -0.61 >More info Atss3 Dark0.5 Original data GEO bulk
81 bbx24 in Simulated Shade -0.64 >More info -0.43 >More info WT in simulated shade shade seedling Original data
82 Mutant arf2-6 (IAA) 0.55 >More info 0.52 >More info Col (IAA) Original data GEO bulk
83 9 hr Hypoxia 1 hr recovery Total RNA 0.64 >More info 0.43 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
84 root Dosed gold 0.62 >More info 0.44 >More info root No gold .125 mM gold 24 h roots Original data
85 protoplasted roots pH4.6 0.59 >More info 0.47 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
86 0.125 mM gold 24 h 0.62 >More info 0.44 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
87 Mutant ga1-5 -0.52 >More info -0.54 >More info Ler-1 Original data Comparison of plant hormone related mutant
88 rdr1-1 -0.49 >More info -0.57 >More info Col-0 Original data GEO bulk
89 Leafminer locally damaged thaliana seedlings 0.56 >More info 0.49 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
90 RPL18 TuMV inoculated total RNA 0.62 >More info 0.43 >More info mock inoculated total RNA PO Original data GEO bulk
91 LTN008-2 aza-dc 0.64 >More info 0.41 >More info LTN012-2 Mock Original data
92 atmyc2 cop1 Seedling BL 0.51 >More info 0.54 >More info WT Seedling BL Original data GEO bulk
93 46T-CK 0.44 >More info 0.61 >More info WT-CK none Original data
94 AtMinD1 Prolonged-induction 0.70 >More info 0.35 >More info Control whole plant Original data GEO bulk
95 seedling 6h after HZE WT 0.57 >More info 0.47 >More info seedling day 1 unirradiated WT 6h Original data
96 gh3.5-1D 48 hpi 0.61 >More info 0.43 >More info Col-0 uninoculated Original data GEO bulk
97 A. thaliana-A. lyrata hybrid -0.63 >More info -0.41 >More info A. thaliana mature leaves before flowering Original data GEO bulk
98 eds16 whole leaf 6hpi -0.40 >More info -0.64 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
99 CeO2 germinant -0.41 >More info -0.63 >More info Millipore Water germinant CeO2 seedling Original data
100 Col-0 low oxygen 0.61 >More info 0.42 >More info Col-0 control low oxygen root Original data GEO bulk
101 WT+H2O2 0.67 >More info 0.36 >More info WT H2O2 Original data GEO bulk
102 CMP 24hr 0.63 >More info 0.40 >More info Acetone 24hr root Original data GEO bulk
103 SCR 72hr-S 0.56 >More info 0.47 >More info SCR 0hr endodermis Original data
104 08h Col-0 0.42 >More info 0.61 >More info 00h Col-0 Original data GEO bulk
105 camta1-2 0.48 >More info 0.55 >More info Col-0-WT Original data GEO bulk
106 roots bhlh100/101 0uM Fe 0.68 >More info 0.34 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
107 root hypoxia pGL2 0.56 >More info 0.46 >More info root hypoxia total hypoxia root Original data GEO bulk
108 seedlings +5AC 0.61 >More info 0.41 >More info control seedlings 10-day old whole seedling Original data GEO bulk
109 SCR 48hr-S 0.55 >More info 0.47 >More info SCR 0hr endodermis Original data
110 CMP 4hr 0.64 >More info 0.38 >More info Acetone 4hr root Original data GEO bulk
111 root control pPEP 0.54 >More info 0.48 >More info root control total control root Original data GEO bulk
112 10min Reillumination Total RNA -0.57 >More info -0.45 >More info 1h Dark Total RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
113 root epidermis and lateral root cap pH4.6 0.57 >More info 0.45 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
114 6h +Pi -0.52 >More info -0.50 >More info 6h -Pi root Original data GEO bulk
115 WT 3H Cold 0.60 >More info 0.41 >More info WT control Original data GEO bulk
116 upb1-1 elongation zone -0.55 >More info -0.46 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
117 roottip control pWOL 0.53 >More info 0.48 >More info roottip control total control roottip Original data GEO bulk
118 GR-REV 60min 0.60 >More info 0.41 >More info Col 60min Original data GEO bulk
119 cop1 Seedling BL 0.45 >More info 0.56 >More info WT Seedling BL Original data GEO bulk
120 Kas2 roots 2hr KNO3 nitrogen 0.62 >More info 0.38 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
121 AtLysM RLK1 mutant water 0.60 >More info 0.40 >More info WT water Original data GEO bulk
122 35S::ERF104 H2O 4h 0.59 >More info 0.41 >More info Col-0 H2O 4h Original data GEO bulk
123 entire vegetative rosette 0.64 >More info 0.36 >More info Col-0 Mock WL entire vegetative rosette Original data
124 SCR 96hr-S 0.52 >More info 0.48 >More info SCR 0hr endodermis Original data
125 Laer Flg22(Agrobacterium) 2h 0.39 >More info 0.61 >More info Laer Control leaf discs Original data GEO bulk
126 WT Atum 2h 0.47 >More info 0.53 >More info WT 0h Leaf tissue Original data GEO bulk
127 Col-0 Root 100 mM ATP 30 min 0.65 >More info 0.34 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
128 E2Fa-Dpa 0.58 >More info 0.41 >More info WT Original data GEO bulk
129 Heat Recovery 24 h (root) 0.54 >More info 0.45 >More info Stress mock 24 h (root) Original data Stress treatments
130 CAX1/CAX3 mutant 0.50 >More info 0.49 >More info Col whole plant Original data GEO bulk
131 embryo ABA 0.69 >More info 0.30 >More info embryo-control ABA embryo Original data GEO bulk
132 AAF-OX 0.43 >More info 0.56 >More info Col-0 Rosette leaf Original data GEO bulk
133 cngc1-3 -0.59 >More info -0.39 >More info Col-0 root Original data GEO bulk
134 ANAC102 knock-out -0.50 >More info -0.48 >More info Col-0 Original data GEO bulk
135 Nicotinamide-69hr 0.64 >More info 0.34 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
136 cngc19 -0.63 >More info -0.35 >More info Col-0 root Original data GEO bulk
137 cpr5 0.45 >More info 0.53 >More info WT(COL) Original data GEO bulk
138 INA 0.46 >More info 0.52 >More info CK INA seedling Original data
139 chito-tetramer 0.61 >More info 0.36 >More info Col Mock Original data GEO bulk
140 hira-root -0.52 >More info -0.45 >More info WT-root root Original data
141 TAMM27 roots 2hr KCl control 0.64 >More info 0.33 >More info Col0 roots 2hr KCl control root Original data GEO bulk
142 ARR21C-ox 0.58 >More info 0.39 >More info Col-0 Original data ARR21C overexpression
143 epiF3 -0.59 >More info -0.38 >More info WT Col-0 aerial part Original data
144 root longitudinal zone-4 pH 4.6 0.44 >More info 0.53 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
145 Whole root - low pH 12H 0.44 >More info 0.53 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
146 ein2-1 24hpi A. brassicicola -0.44 >More info -0.53 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
147 35S:LOB-GR DEX -0.62 >More info -0.34 >More info Col DEX dexamethasone seedling Original data GEO bulk
148 Mutant ufo-1(flower) 0.53 >More info 0.43 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
149 root control pGL2 0.58 >More info 0.38 >More info root control total control root Original data GEO bulk
150 root epidermis and lateral root cap 40 mM NaCl 0.57 >More info 0.39 >More info root epidermis and lateral root cap Original data GEO bulk
151 Atss3 Dark8 -0.43 >More info -0.53 >More info Atss3 Dark0.5 Original data GEO bulk
152 roottip hypoxia pSCR 0.42 >More info 0.54 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
153 sdg8-2 mutant -0.43 >More info -0.53 >More info wild type leaf Original data GEO bulk
154 S58-2 0.35 >More info 0.61 >More info wt Original data GEO bulk
155 Col BTH 0.29 >More info 0.67 >More info Col rosettes Original data GEO bulk
156 P.p 10.5hai 0.59 >More info 0.36 >More info At-Control roots Original data GEO bulk
157 Root P recovery 0.61 >More info 0.34 >More info Root -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
158 IAA/inhibitor B Treated 0.43 >More info 0.52 >More info IAA Treated Original data GEO bulk
159 Col whole leaf 5 dpi 0.43 >More info 0.52 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
160 oas-a1.1 Cd 18h 0.45 >More info 0.50 >More info Cd 18h root Root Original data GEO bulk
161 camta2/3 warm 0.45 >More info 0.50 >More info WT warm entire aerial part Original data GEO bulk
162 dde2-2 24hpi A. brassicicola -0.33 >More info -0.62 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
163 Dark 6h ivd 0.55 >More info 0.39 >More info 0h ivd Original data
164 camta1/3 warm 0.50 >More info 0.44 >More info WT warm entire aerial part Original data GEO bulk
165 9 hr Hypoxia Total RNA 0.64 >More info 0.30 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
166 spch 0.58 >More info 0.36 >More info Col-0 WT whole seedling Original data GEO bulk
167 hepta mutant (higher order mutant) 0.64 >More info 0.30 >More info col control (higher order mutant) Original data GEO bulk
168 elf3-7-16ºC -0.57 >More info -0.37 >More info WT-16ºC Original data GEO bulk
169 atmyc2 Seedling BL 0.68 >More info 0.25 >More info WT Seedling BL Original data GEO bulk
170 root cells epidermis 140mM NaCl 3 hours 0.56 >More info 0.37 >More info root cells epidermis standard 1 hour root cells epidermis Original data
171 cpr5npr1svi1 0.40 >More info 0.53 >More info WT(COL) Original data GEO bulk
172 DUO1 induced 6h 0.51 >More info 0.42 >More info 6hr-not-induced whole plant Original data GEO bulk
173 Mutant gh3.5-1D (AvrRpt2) 0.59 >More info 0.34 >More info Col-0 (AvrRpt2) Original data GEO bulk
174 root cells epidermis 140mM NaCl 48 hours 0.57 >More info 0.36 >More info root cells epidermis standard 1 hour root cells epidermis Original data
175 WT-NOCO2 INFECTED 0.42 >More info 0.51 >More info WT-MOCK Original data GEO bulk
176 cpr5npr1 0.43 >More info 0.50 >More info WT(COL) Original data GEO bulk
177 seedling 6h after HZE atm-1 0.34 >More info 0.59 >More info seedling day 1 unirradiated atm-1 6h Original data
178 P.p 6hai 0.64 >More info 0.28 >More info At-Control roots Original data GEO bulk
179 RPL18 TuMV inoculated polysomal RNA 0.53 >More info 0.39 >More info mock inoculated polysomal RNA PO Original data GEO bulk
180 Inflorescences Trp1 0.24 >More info 0.68 >More info Inflorescences ler inflorescences Original data GEO bulk
181 hai1-2 -0.62 >More info -0.30 >More info control control whole seedlings Original data GEO bulk
182 smg7b-1 0.42 >More info 0.50 >More info WT whole plant Original data GEO bulk
183 Cycloheximide 3 h 0.55 >More info 0.36 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
184 9m.KCl 0.63 >More info 0.28 >More info To. KCl 14 day old Roots Original data GEO bulk
185 FLIGHT TAGESB plate6 ROOTS 0.51 >More info 0.40 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
186 inhibitor B Treated 0.55 >More info 0.36 >More info Negative Control Original data GEO bulk
187 ice1 control 0.40 >More info 0.51 >More info WT control Original data GEO bulk
188 sni1 0.36 >More info 0.55 >More info WT Original data GEO bulk
189 csn5 (csn5a-2 csn5b) dark 0.62 >More info 0.29 >More info WT dark Original data GEO bulk
190 embryo paclobutrazol 0.69 >More info 0.22 >More info embryo-control paclobutrazol embryo Original data GEO bulk
191 WT Atum 1h 0.41 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
192 Dex-rga(delta17) 4h GA4 -0.51 >More info -0.39 >More info Vector 4h GA4 shoots Original data GEO bulk
193 Shoot apex inflorescence (after bolting) 0.25 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
194 SHR-GR Time 1H Dex -0.35 >More info -0.55 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
195 16h Col-0 0.40 >More info 0.50 >More info 00h Col-0 Original data GEO bulk
196 phyB mutant 16C 4hrs 0.33 >More info 0.57 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
197 plant (Col-0) 4h OPDA 0.55 >More info 0.34 >More info plant (Col-0) 4h control Original data GEO bulk
198 OPDA 4 h 0.55 >More info 0.34 >More info Col-0 Original data GEO bulk
199 nNOS-drought -0.62 >More info -0.27 >More info WT-drought leaf Original data
200 LTN005-2 TSA 0.59 >More info 0.30 >More info LTN012-2 Mock Original data
201 shoot-10 μM DEX- 12 hr 0.32 >More info 0.57 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
202 whole roots -Fe 48 hour 0.56 >More info 0.32 >More info whole roots standard Original data GEO bulk
203 root cells endodermis 140mM NaCl 3 hours 0.63 >More info 0.25 >More info root cells endodermis standard 1 hour root cells endodermis Original data
204 SCR 24hr-S 0.50 >More info 0.38 >More info SCR 0hr endodermis Original data
205 phyB Rc50 0.61 >More info 0.27 >More info WT(Ler) Rc50 Original data GEO bulk
206 root cells columella root cap -Fe 0.50 >More info 0.38 >More info whole roots standard Original data GEO bulk
207 4d red light grown hmr-5 seedlings 0.60 >More info 0.28 >More info 4d red light grown WT(Col-0) seedlings Original data
208 COL-0-Fe--shoot -0.38 >More info -0.50 >More info COL-0-Ctrl--shoot shoot Original data
209 xyl-grown cell culture- 1h 1mM Suc -0.18 >More info -0.70 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
210 whole roots -Fe 72 hour 0.55 >More info 0.32 >More info whole roots standard Original data GEO bulk
211 Fe starvation 72 h 0.55 >More info 0.32 >More info Control Original data GEO bulk
212 BLM 0.63 >More info 0.24 >More info CK BLM seedling Original data
213 siliques AtHb1 control 0.35 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
214 csn4-1 mutant 0.58 >More info 0.29 >More info WT dark Original data GEO bulk
215 root cells endodermis 140mM NaCl 48 hours 0.57 >More info 0.30 >More info root cells endodermis standard 1 hour root cells endodermis Original data
216 root cells epidermis 140mM NaCl 8 hours 0.52 >More info 0.34 >More info root cells epidermis standard 1 hour root cells epidermis Original data
217 2hr transitory KNO3 SR cell 0.53 >More info 0.33 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
218 Mutant sav3-2 (WL) 0.19 >More info 0.67 >More info Col-0 (WL) Original data GEO bulk
219 sav3-2 light 0.19 >More info 0.67 >More info Col-0 light seedlings Original data GEO bulk
220 sid2-2 24hpi A. brassicicola -0.31 >More info -0.55 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
221 Nicotinamide-61hr 0.51 >More info 0.35 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
222 LTN014-2 aza-dc+TSA -0.51 >More info -0.34 >More info LTN012-2 Mock Original data
223 root stele pH4.6 0.51 >More info 0.34 >More info root stele pH5.7 Original data GEO bulk
224 Cs shoot -0.32 >More info -0.53 >More info control shoot Original data GEO bulk
225 WT tZ -0.30 >More info -0.55 >More info WT Original data GEO bulk
226 roottip control pSCR 0.50 >More info 0.35 >More info roottip control total control roottip Original data GEO bulk
227 BI-1-30min IAA -0.50 >More info -0.35 >More info BI-1-0h IAA whole plant Original data GEO bulk
228 GA4 3 h (ga1 seed) 0.69 >More info 0.16 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
229 whole roots 140 mM NaCl 1 hour 0.56 >More info 0.28 >More info whole roots standard Original data GEO bulk
230 plant (tga2-5-6) 4h OPDA 0.56 >More info 0.28 >More info plant (tga2-5-6) 4h control Original data GEO bulk
231 sdg2 0.53 >More info 0.31 >More info wt seedling Original data GEO bulk
232 L2.4 mutant 0.53 >More info 0.31 >More info Wt Original data GEO bulk
233 vte1-1 1d vernalization 0.65 >More info 0.19 >More info WT 1d vernalization Original data GEO bulk
234 Anoxia 0.61 >More info 0.23 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
235 cpctry 0.31 >More info 0.52 >More info Col Original data GEO bulk
236 mp-B4149 mutant IAA 0.60 >More info 0.23 >More info GR-bdl IAA Original data GEO bulk
237 root cells epidermis 140mM NaCl 32 hours 0.50 >More info 0.32 >More info root cells epidermis standard 1 hour root cells epidermis Original data
238 2hr continuous KNO3 SR cell 0.52 >More info 0.30 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
239 PIF5ox high R/FR 0.55 >More info 0.27 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
240 atmospheric CO2 low Mg shoot 0.53 >More info 0.29 >More info atmospheric CO2 normal Mg shoot Shoot Original data
241 Elevated CO2 AMPLE N DAY 0.31 >More info 0.51 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
242 24h +Pi -0.60 >More info -0.22 >More info 24h -Pi root Original data GEO bulk
243 root control pSultr2:2 0.59 >More info 0.23 >More info root control total control root Original data GEO bulk
244 46T-Dry 0.23 >More info 0.59 >More info WT-Dry dehydration treatment 1h Original data
245 root columella root cap 40 mM NaCl 0.52 >More info 0.29 >More info root columella root cap Original data GEO bulk
246 Ts5 roots 2hr KNO3 nitrogen 0.53 >More info 0.28 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
247 15m.KCl 0.52 >More info 0.29 >More info To. KCl 14 day old Roots Original data GEO bulk
248 root cells endodermis 140mM NaCl 1 hour 0.56 >More info 0.24 >More info root cells endodermis standard 1 hour root cells endodermis Original data
249 csn5 (csn5a-2 csn5b) light 0.53 >More info 0.27 >More info WT light Original data GEO bulk
250 GST-overexpression seedlings control -0.51 >More info -0.29 >More info WT seedlings control Seedlings Original data
251 GV3101 3hpi 0.26 >More info 0.54 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
252 bak1-3 +Pep2 10h 0.58 >More info 0.22 >More info WT +Pep2 10h Pep2 Original data GEO bulk
253 Col-0 0h NAA 0.55 >More info 0.24 >More info Col-0 6h MOCK Original data GEO bulk
254 roottip control p35S 0.53 >More info 0.26 >More info roottip control total control roottip Original data GEO bulk
255 NAA -AA -0.52 >More info -0.27 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
256 IAA 0h -0.51 >More info -0.28 >More info control 0h root Original data GEO bulk
257 elf3-7-23ºC -0.73 >More info -0.06 >More info WT-23ºC Original data GEO bulk
258 Col-0 DCA 48h 0.26 >More info 0.53 >More info Col-0 MOCK 48h Original data GEO bulk
259 spx1 spx2 no Pi 0.50 >More info 0.28 >More info WT no Pi seedlings Original data
260 elevated CO2 high Mg root -0.60 >More info -0.18 >More info atmospheric CO2 high Mg root Root Original data
261 rhd2 0.52 >More info 0.26 >More info WT Small excised segments of primary root tissue corresponding to root-hair elongation zone Original data GEO bulk
262 root hypoxia total 0.53 >More info 0.25 >More info root control total Original data GEO bulk
263 35S-MIF1 dark grown -0.58 >More info -0.20 >More info Dark-grown WT control Original data GEO bulk
264 arp6-10 12 ºC 0.27 >More info 0.51 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
265 pip3 At2g19270 RNAi 24 -0.17 >More info -0.61 >More info Nd-1 whole plant Original data GEO bulk
266 WT cold 24h 0.51 >More info 0.26 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
267 root cells epidermis 140mM NaCl 20 hours 0.52 >More info 0.25 >More info root cells epidermis standard 1 hour root cells epidermis Original data
268 root cells cortex 140mM NaCl 48 hours 0.51 >More info 0.26 >More info root cells cortex standard 1 hour root cells cortex Original data
269 csn3-1 dark 0.57 >More info 0.20 >More info WT dark Original data GEO bulk
270 Col0-PsmES4326-24hpi 0.16 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
271 root hypoxia pSUC2 0.50 >More info 0.26 >More info root hypoxia total hypoxia root Original data GEO bulk
272 ahg3-1 0.60 >More info 0.16 >More info ABA control Original data GEO bulk
273 jkd-4 QC 0.56 >More info 0.20 >More info Col-0 QC Quiescent Center Original data
274 cca1-lhy 15m light 0.20 >More info 0.56 >More info 15m light whole seedlings Original data GEO bulk
275 whole roots 140 mM NaCl 30 minutes 0.50 >More info 0.25 >More info whole roots standard Original data GEO bulk
276 root cells endodermis 140mM NaCl 8 hours 0.56 >More info 0.19 >More info root cells endodermis standard 1 hour root cells endodermis Original data
277 root longitudinal zone-4 NaCl 0.62 >More info 0.13 >More info root longitudinal zone-4 Original data GEO bulk
278 IAA7mII over-expressor IAA Treated 0.06 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
279 ABA control 0.58 >More info 0.16 >More info No ABA control Original data GEO bulk
280 arr-dmso-sample 0.55 >More info 0.19 >More info Wt-dmso-sample seedling Original data
281 Heat and anoxia 0.60 >More info 0.14 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
282 root cells cortex 140mM NaCl 3 hours 0.53 >More info 0.21 >More info root cells cortex standard 1 hour root cells cortex Original data
283 Col 0 2h KNO3 -0.52 >More info -0.22 >More info Col 0 2h KCl 5 mM KNO3 root Original data GEO bulk
284 toc1-1-89hr 0.72 >More info 0.02 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
285 vtc2 zygotic embryo 0.20 >More info 0.54 >More info WT zygotic embryo zygotic embryo Original data GEO bulk
286 seedlings-week-old RECA1-overexpressing
transgenic		 0.51 >More info 0.22 >More info seedlings-week-old Col-0 seedlings Original data
287 Col-0 DCA 6d 0.51 >More info 0.21 >More info Col-0 MOCK 6d Original data GEO bulk
288 nas4x roots + Fe -0.50 >More info -0.22 >More info WT roots + Fe Roots Original data GEO bulk
289 WT 24H Cold 0.58 >More info 0.14 >More info WT control Original data GEO bulk
290 seedling 12h after Gamma WT 0.19 >More info 0.53 >More info seedling day 1 unirradiated WT 12h Original data
291 35S::ZAT12 0.55 >More info 0.16 >More info gl1 Original data GEO bulk
292 AtMinD1 Temporal-induction 0.57 >More info 0.14 >More info Control whole plant Original data GEO bulk
293 Ovary 0.56 >More info 0.14 >More info Seedling Original data GEO bulk
294 seedling 6h after Gamma atm-1 0.17 >More info 0.53 >More info seedling day 1 unirradiated atm-1 6h Original data
295 HSP90 Reduced RNAi-B1 0.56 >More info 0.13 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
296 seedling 3h after HZE WT 0.66 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
297 Nicotinamide-89hr 0.56 >More info 0.12 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
298 gul2-1 mutant 0.53 >More info 0.15 >More info WT 7 day-old whole seedlings Original data
299 tor mutant glucose 0.52 >More info 0.16 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
300 piffq FR 3h -0.55 >More info -0.12 >More info WT FR 3h whole seedling Original data GEO bulk
301 root cells cortex 140mM NaCl 1 hour 0.52 >More info 0.15 >More info root cells cortex standard 1 hour root cells cortex Original data
302 root control pSUC2 0.50 >More info 0.17 >More info root control total control root Original data GEO bulk
303 seedling 12h after Gamma atm-1 0.14 >More info 0.53 >More info seedling day 1 unirradiated atm-1 12h Original data
304 Col leaf scrape 5 dpi -0.61 >More info -0.06 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
305 4C 2h(SOIL) 0.51 >More info 0.15 >More info 4C 0h(SOIL) Original data GEO bulk
306 hsfa1 quadruple mutant heat shock -0.50 >More info -0.16 >More info WT (Col-0) heat shock whole seedling Original data GEO bulk
307 PsJN 0.13 >More info 0.53 >More info Control inoculated with the PGPR bacterial model Burkholderia phytofirmans PsJN Plantlet Original data GEO bulk
308 vtc1-1 0.59 >More info 0.07 >More info Col-0 whole plant Original data GEO bulk
309 WT 6H Cold 0.53 >More info 0.12 >More info WT control Original data GEO bulk
310 gis5 seedlings -0.56 >More info -0.08 >More info WT seedlings Whole seedlings (leaves + roots) Original data
311 root cells stele 140mM NaCl 3 hours 0.52 >More info 0.12 >More info root cells stele standard 1 hour root cells stele Original data
312 shoot hypoxia p35S -0.08 >More info -0.56 >More info shoot hypoxia total Original data GEO bulk
313 sfr3 cold 0.12 >More info 0.52 >More info WT cold All aerial tissue Original data GEO bulk
314 Laer pretreat GA Flg22 1h -0.07 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
315 erf104-ko H2O 4h 0.50 >More info 0.12 >More info Col-0 H2O 4h Original data GEO bulk
316 root control pRPL11C 0.51 >More info 0.10 >More info root control total control root Original data GEO bulk
317 glk1 glk2 GLK1-GR +DEX 24h -0.57 >More info -0.04 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
318 WT NAA 2h 0.53 >More info 0.07 >More info WT 0h Leaf tissue Original data GEO bulk
319 control leaf (cmt 1d) -0.50 >More info -0.10 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
320 3x(p) 0.10 >More info 0.50 >More info 2x two week old seedlings Original data
321 CCA1-ox 6am non-polysomal 0.09 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
322 FAMA induced 48h -0.54 >More info -0.05 >More info control 48h Whole seedling Original data GEO bulk
323 ahg2-1abi1-1 0.56 >More info 0.03 >More info WT (Col) control Original data GEO bulk
324 Senescing leaf 0.55 >More info 0.04 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
325 SAB -0.54 >More info -0.05 >More info COL seedling Original data
326 atr mock -0.54 >More info -0.05 >More info WT mock shoot apical meristem Original data
327 til1-1 37C 0.50 >More info 0.07 >More info Col-0 37C Original data GEO bulk
328 root hypoxia pRPL11C 0.52 >More info 0.05 >More info root hypoxia total hypoxia root Original data GEO bulk
329 ahg1-1 0.63 >More info -0.07 >More info ABA control Original data GEO bulk
330 mpk6-ko H2O 4h 0.56 >More info 0.00 >More info Col-0 H2O 4h Original data GEO bulk
331 QC pSCR 0h BL 0.53 >More info 0.01 >More info WR 35S 0h BL brassinosteroid root Original data
332 rosette leaves fdh 0.50 >More info 0.03 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
333 eds16 laser microdissected 5 dpi -0.51 >More info -0.02 >More info Col laser microdissected 5 dpi LMD leaf epidermal and mesophyll cells Original data GEO bulk
334 root endodermis and quiescent center 40 mM NaCl 0.51 >More info 0.02 >More info root endodermis and quiescent center Original data GEO bulk
335 FLIGHT TAGESB plate 0.50 >More info 0.03 >More info GROUND CONTROL TAGESB plate Original data
336 35S::PI ap3-3 35S::AP-GR +DEX 0.53 >More info -0.01 >More info 0hr DEX Original data GEO bulk
337 whole roots -Fe 12 hour 0.50 >More info 0.02 >More info whole roots standard Original data GEO bulk
338 iron minus 0 h 0.58 >More info -0.07 >More info iron +0 h root Original data GEO bulk
339 long 14-degree- 0.01 >More info -0.52 >More info control long Original data GEO bulk
340 KAN1-GR 30min 0.52 >More info -0.02 >More info KAN1-GR 0min Original data GEO bulk
341 seed germinating in countinuous light 24h SL -0.18 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
342 Total RNA 35S:HF-RPL18 -0.19 >More info 0.67 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
343 4d red light grown hmr-22 seedlings 0.69 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
344 root longitudinal zone-1 NaCl 0.51 >More info -0.04 >More info root longitudinal zone-1 Original data GEO bulk
345 shoot control p35S 0.04 >More info -0.51 >More info shoot control total Original data GEO bulk
346 -Sulfate 24 h 0.22 >More info -0.66 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
347 Mock pft1 leaf -0.09 >More info 0.50 >More info Mock Col-0 leaf water leaf Original data GEO bulk
348 Blue Light 45 min -0.16 >More info 0.56 >More info White Light 45min Original data Light treatments
349 Col-O low light -0.13 >More info 0.50 >More info Col-O bule light Original data GEO bulk
350 eds16 whole leaf 1dpi 0.26 >More info -0.58 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
351 expressing C2 Mock -0.19 >More info 0.50 >More info LUC2C Original data GEO bulk
352 aphid infested 0.54 >More info -0.25 >More info control aphid infested Leaves Original data GEO bulk
353 aphid infested 0.54 >More info -0.25 >More info CTR Original data GEO bulk
354 seedling h S Exp -0.29 >More info 0.54 >More info seedling -S Exp seedling Original data