4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on entire vegetative rosette
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List of experiments correlated with "entire vegetative rosette"  Help Download transcriptome of top 30
Score Experiment Correlation from
entire vegetative rosette		 Correlation to
entire vegetative rosette		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 entire vegetative rosette 1.00 >More info 1.00 >More info Col-0 Mock WL entire vegetative rosette Original data
2 phr1 phl1 Root-Pi -0.55 >More info -0.72 >More info WT Shoot+Pi roots Original data GEO bulk
3 Ovary 0.56 >More info 0.61 >More info Seedling Original data GEO bulk
4 phr1 Shoot-Pi 0.54 >More info 0.62 >More info WT Root-Pi shoots Original data GEO bulk
5 FAMA induced 4h 0.58 >More info 0.56 >More info control 4h Whole seedling Original data GEO bulk
6 bri1-116 0.41 >More info 0.73 >More info Col seedling Original data GEO bulk
7 DUO1 induced 24h 0.51 >More info 0.61 >More info 24hr-not-induced whole plant Original data GEO bulk
8 root cells endodermis and quiescent center -Fe 0.54 >More info 0.57 >More info whole roots standard Original data GEO bulk
9 root cells columella root cap -Fe 0.49 >More info 0.59 >More info whole roots standard Original data GEO bulk
10 WT-16ºC -0.47 >More info -0.61 >More info WT-23ºC Original data GEO bulk
11 DUO1 induced 12h 0.40 >More info 0.67 >More info 12hr-not-induced whole plant Original data GEO bulk
12 PIF5ox high R/FR 0.56 >More info 0.49 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
13 whole roots 140 mM NaCl 4 hour 0.43 >More info 0.61 >More info whole roots standard Original data GEO bulk
14 mp-B4149 mutant IAA 0.57 >More info 0.44 >More info GR-bdl IAA Original data GEO bulk
15 EBE-XVE +estradiol -0.22 >More info -0.79 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
16 stele pSHR 0h BL 0.55 >More info 0.45 >More info WR 35S 0h BL brassinosteroid root Original data
17 toc1-1-81hr 0.39 >More info 0.61 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
18 toc1-1-73hr 0.36 >More info 0.64 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
19 col-5 DC3000 4h -0.37 >More info -0.62 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
20 Stigma 0.51 >More info 0.47 >More info Seedling Original data GEO bulk
21 col-5 hrpA 4h -0.34 >More info -0.64 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
22 cngc1-3 -0.54 >More info -0.43 >More info Col-0 root Original data GEO bulk
23 toc1-1-85hr 0.36 >More info 0.61 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
24 dicamba 0.43 >More info 0.54 >More info WT mock whole seedling Original data GEO bulk
25 col-5 hrpA 2h -0.33 >More info -0.64 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
26 arr-dmso-sample 0.43 >More info 0.54 >More info Wt-dmso-sample seedling Original data
27 SA 0.40 >More info 0.56 >More info WT mock Whole seedling Original data GEO bulk
28 cngc19 -0.60 >More info -0.36 >More info Col-0 root Original data GEO bulk
29 root cells stele -Fe 0.44 >More info 0.52 >More info whole roots standard Original data GEO bulk
30 Col-0 low oxygen -0.58 >More info -0.37 >More info Col-0 Original data GEO bulk
31 toc1-1-53hr 0.31 >More info 0.63 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
32 root cells -Fe 0.39 >More info 0.54 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
33 spx1 spx2 no Pi 0.43 >More info 0.50 >More info WT no Pi seedlings Original data
34 Col-0 0h NAA 0.40 >More info 0.51 >More info Col-0 6h MOCK Original data GEO bulk
35 Col-0 shade 0.27 >More info 0.63 >More info Col-0 light seedlings Original data GEO bulk
36 E.coli TUV86 2 fliC 7h -0.21 >More info -0.69 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
37 hrpA fliC 7h -0.16 >More info -0.73 >More info Mock 7h hrpA fliC Original data GEO bulk
38 ASL9-ox 0.38 >More info 0.50 >More info WT aerial parts of seedlings Original data GEO bulk
39 iae1 -0.37 >More info -0.51 >More info B179 Original data GEO bulk
40 root longitudinal zone-4 NaCl 0.35 >More info 0.53 >More info root longitudinal zone-4 Original data GEO bulk
41 ABA 3 h 0.36 >More info 0.50 >More info Mock 3 h Original data Basic hormone treatment of seedlings
42 Heat shock optimum 0.19 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
43 afb3-1 2h KNO3 0.30 >More info 0.54 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
44 whole roots 140 mM NaCl 1 hour 0.25 >More info 0.59 >More info whole roots standard Original data GEO bulk
45 INA 0.11 >More info 0.73 >More info CK INA seedling Original data
46 hrpA 7h -0.20 >More info -0.63 >More info Mock 7h hrpA Original data GEO bulk
47 root protoplasts 40 mM NaCl 0.28 >More info 0.55 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
48 Laer Pst DC3000 12hpi 0.29 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
49 camta1-2 0.27 >More info 0.55 >More info Col-0-WT Original data GEO bulk
50 NaCl Col 0.28 >More info 0.54 >More info Col Original data GEO bulk
51 Polysomal RNA 35S:AtCSP1-FH1 -0.28 >More info -0.53 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
52 vte1-1 3d vernalization -0.31 >More info -0.50 >More info WT 3d vernalization Original data GEO bulk
53 ABA 1 h 0.26 >More info 0.54 >More info Mock 1 h Original data Basic hormone treatment of seedlings
54 mutant acs6E (single mutant) -0.29 >More info -0.51 >More info col control (single mutant) Original data GEO bulk
55 24h volatiles Sp. HRO-C48 0.24 >More info 0.56 >More info 24h untreated whole seedling Original data GEO bulk
56 msh1 stunt -0.25 >More info -0.55 >More info WT Col-0 above ground part of plant Original data GEO bulk
57 shoots WT 0uM Fe -0.25 >More info -0.55 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
58 Leafminer damaged seedlings 0.24 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
59 DUO1 induced 6h 0.08 >More info 0.72 >More info 6hr-not-induced whole plant Original data GEO bulk
60 IAA7mII over-expressor IAA Treated 0.10 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
61 E.coli 0157 H7 7h -0.10 >More info -0.69 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
62 tunicamycin 0.16 >More info 0.62 >More info DMF Original data GEO bulk
63 WT (Ler) CK200 0.17 >More info 0.61 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
64 col-5 DC3000-avrRpm 4h -0.24 >More info -0.54 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
65 Shoot apex inflorescence (after bolting) 0.12 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
66 root longitudinal zone-3 -Fe -0.21 >More info -0.56 >More info root longitudinal zone-3 standard Original data GEO bulk
67 root cells epidermis 140mM NaCl 1 hour 0.21 >More info 0.56 >More info root cells epidermis standard 1 hour root cells epidermis Original data
68 Total RNA 35S:AtCSP1-FH1 -0.24 >More info -0.51 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
69 Mutant arf2-6 (IAA) 0.23 >More info 0.51 >More info Col (IAA) Original data GEO bulk
70 dde2-2 9 hpi A. brassicicola -0.14 >More info -0.60 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
71 Col0-PsmES4326-24hpi 0.12 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
72 mpk6-ko Flg22 4h -0.14 >More info -0.58 >More info mpk6-ko H2O 4h Original data GEO bulk
73 Laer Flg22 2h -0.19 >More info -0.52 >More info Laer Control leaf discs Original data GEO bulk
74 sid2-2 9 hpi A. brassicicola -0.18 >More info -0.53 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
75 Col BTH 0.03 >More info 0.67 >More info Col rosettes Original data GEO bulk
76 atgsnor1-3-avrB-6h -0.17 >More info -0.52 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
77 iron minus 6 h -0.15 >More info -0.51 >More info iron +6 h root Original data GEO bulk
78 COL-0-Fe--shoot -0.10 >More info -0.56 >More info COL-0-Ctrl--shoot shoot Original data
79 t-zeatin 0.5 h 0.11 >More info 0.54 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
80 siliques AtHb1 control 0.12 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
81 TNT-seedlings -0.03 >More info 0.65 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
82 CCA1-ox 6am non-polysomal 0.11 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
83 FarRed Light 45min 0.03 >More info 0.58 >More info White Light 45min Original data Light treatments
84 NahG -0.09 >More info -0.52 >More info Col-0 Leaves Original data GEO bulk
85 IRP1-OE-Fe--shoot -0.10 >More info -0.51 >More info COL-0-Fe--shoot shoot Original data
86 tetraploid 0.06 >More info 0.53 >More info diploid Original data GEO bulk
87 Col-0 Flg22 4h 0.01 >More info -0.60 >More info Col-0 H2O 4h Original data GEO bulk
88 cat2-2; 8h switch to ambient CO2 concentrations; -0.03 >More info -0.55 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
89 col-5 hrpA 12h -0.07 >More info -0.50 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
90 WT NAA 2h -0.04 >More info 0.59 >More info WT 0h Leaf tissue Original data GEO bulk
91 wavy -0.02 >More info 0.57 >More info WT Original data GEO bulk
92 6-trichlorophenoxyacetic acid 3 h 0.03 >More info -0.56 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
93 GST 4 h (leaf) 0.13 >More info -0.66 >More info Mock 4 h (leaf) Original data Elicitor treatments
94 root longitudinal zone-2 -Fe 0.03 >More info -0.56 >More info root longitudinal zone-2 standard Original data GEO bulk
95 seed germinating in countinuous light 24h SL -0.14 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
96 root longitudinal zone-4 -Fe 0.02 >More info -0.54 >More info root longitudinal zone-4 standard Original data GEO bulk
97 Col-0 DEX Shade -0.07 >More info 0.58 >More info Col-0 DEX WL seedlings Original data
98 pif5 high R/FR 0.00 >More info -0.50 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
99 Laer pretreat JA Flg22 0h 0.09 >More info -0.58 >More info Laer pretreat water control leaf discs Original data GEO bulk
100 Laer pretreat GA Flg22 1h -0.22 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
101 bio4-1 mutant watered00µM biotin leaves -0.02 >More info 0.51 >More info bio4-1 mutant leaves leaves Original data GEO bulk
102 Light 0.5h steady-state 0.04 >More info -0.50 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
103 PNO8 3 h 0.06 >More info -0.50 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
104 triploid female excess 0.12 >More info -0.55 >More info tetraploid Original data GEO bulk
105 2hr continuous KNO3 ECR cell 0.09 >More info -0.52 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
106 2hr continuous KNO3 and MSX PeR cell 0.07 >More info -0.50 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
107 ptpks2 0.21 >More info -0.60 >More info Col-WT leaves Original data GEO bulk
108 Lipopolysaccaride4 h (leaf) 0.16 >More info -0.53 >More info Mock 4 h (leaf) Original data Elicitor treatments