4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Laer pretreat JA Flg22 0h
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Score Experiment Correlation from
Laer pretreat JA Flg22 0h		 Correlation to
Laer pretreat JA Flg22 0h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Laer pretreat JA Flg22 0h 1.00 >More info 1.00 >More info Laer pretreat water control leaf discs Original data GEO bulk
2 Laer pretreat JA Flg22 1h 0.87 >More info 0.81 >More info Laer pretreat water control leaf discs Original data GEO bulk
3 Laer pretreat JA Flg22 2h 0.82 >More info 0.75 >More info Laer pretreat water control leaf discs Original data GEO bulk
4 atgsnor1-3-avrB-6h 0.82 >More info 0.64 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
5 NahG 0.72 >More info 0.72 >More info Col-0 Leaves Original data GEO bulk
6 Laer pretreat GA+JA Flg22 0h 0.69 >More info 0.73 >More info Laer pretreat water control leaf discs Original data GEO bulk
7 eds16 whole leaf 0h UI 0.70 >More info 0.72 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
8 cat2-short-day 4d 0.77 >More info 0.60 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
9 Col-0 INA 6d -0.78 >More info -0.58 >More info Col-0 MOCK 6d Original data GEO bulk
10 rao2 H2O2 3h -0.74 >More info -0.62 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
11 INA -0.61 >More info -0.73 >More info CK INA seedling Original data
12 Laer pretreat GA+JA Flg22 1h 0.64 >More info 0.70 >More info Laer pretreat water control leaf discs Original data GEO bulk
13 PstDC3000 48h -0.59 >More info -0.75 >More info WT untreated 48hr leaf Original data GEO bulk
14 Laer pretreat GA+JA Flg22 2h 0.68 >More info 0.65 >More info Laer pretreat water control leaf discs Original data GEO bulk
15 Methyl Jasmonate 3 h 0.64 >More info 0.68 >More info Mock 3 h Original data Basic hormone treatment of seedlings
16 eds16 whole leaf 7d UI 0.66 >More info 0.66 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
17 eds16 whole leaf 3dpi 0.68 >More info 0.62 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
18 plant (Col-0) 4h phytoprostane A1 0.72 >More info 0.57 >More info plant (tga2-5-6) 4h control Original data GEO bulk
19 camta2/3 warm -0.78 >More info -0.50 >More info WT warm entire aerial part Original data GEO bulk
20 Octopus overexpressor 35SDYG25 -0.72 >More info -0.55 >More info WS Original data GEO bulk
21 Botrytis cinerea 48h 0.64 >More info 0.60 >More info control 48h Original data GEO bulk
22 coi1-PsmES4326-24hpi -0.52 >More info -0.72 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
23 shoot-10 μM DEX- 3 hr 0.68 >More info 0.55 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
24 WT leaf-drought 0.74 >More info 0.49 >More info WT leaf-well watered Original data GEO bulk
25 Homozygous-AtcesA6 0.76 >More info 0.47 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
26 JA 0.56 >More info 0.66 >More info Col-0 mock Whole seedling Original data GEO bulk
27 Col-0 +ABA LF 0.70 >More info 0.52 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
28 anac017-2 water 3h 0.62 >More info 0.60 >More info WT water 3h 3h_water Original data GEO bulk
29 ARR22-ox 0.74 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
30 Mutant NahG(leaf) 0.64 >More info 0.56 >More info Col-0 (leaf) Original data GEO bulk
31 sid2-2 safener 0.74 >More info 0.46 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
32 epiF3 0.75 >More info 0.45 >More info WT Col-0 aerial part Original data
33 camta3-1 -0.73 >More info -0.46 >More info WT Original data GEO bulk
34 sid2-avrB-6h 0.78 >More info 0.41 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
35 C2 leaf-drought 0.68 >More info 0.51 >More info C2 leaf-well watered Original data GEO bulk
36 rao2 AntimycinA 3h -0.58 >More info -0.60 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
37 inhibitor B Treated 0.60 >More info 0.58 >More info Negative Control Original data GEO bulk
38 plant (Col-0) 4h OPDA 0.56 >More info 0.61 >More info plant (Col-0) 4h control Original data GEO bulk
39 eds16 whole leaf 6hpi 0.67 >More info 0.50 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
40 OPDA 4 h 0.56 >More info 0.61 >More info Col-0 Original data GEO bulk
41 JA 3h 0.39 >More info 0.78 >More info EtOH 3h 3hr Original data GEO bulk
42 camta1/3 warm -0.79 >More info -0.37 >More info WT warm entire aerial part Original data GEO bulk
43 sid2-2 9 hpi A. brassicicola 0.69 >More info 0.47 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
44 Heat no recovery 0.73 >More info 0.42 >More info Mock no recovery seedling Original data GEO bulk
45 cat2-short-day 2d 0.71 >More info 0.44 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
46 ASL9-ox -0.74 >More info -0.40 >More info WT aerial parts of seedlings Original data GEO bulk
47 ANAC102 over-expressor 0.58 >More info 0.55 >More info C24 Original data GEO bulk
48 flu over-tAPX 0.64 >More info 0.49 >More info WT Col Original data GEO bulk
49 plant (tga2-5-6) 4h control -0.62 >More info -0.50 >More info plant (Col-0) 4h control Original data GEO bulk
50 DC3000 7h 0.52 >More info 0.60 >More info Mock 7h DC3000 Original data GEO bulk
51 eds16 whole leaf 1dpi 0.51 >More info 0.61 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
52 Col-0 under 4 days salt 0.63 >More info 0.49 >More info Col-0 under control 4 days salt treatment rosette Original data
53 ein2-PsmES4326-24hpi -0.65 >More info -0.47 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
54 MYB29 OE 0.62 >More info 0.50 >More info WT for MYB29/76 Original data GEO bulk
55 Col-0 flu HL 3h 0.59 >More info 0.53 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
56 Mutant tga2_5_6 -0.62 >More info -0.50 >More info Col-0 Original data GEO bulk
57 Methyl Jasmonate 0.5 h 0.46 >More info 0.66 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
58 vtc1-1 -0.65 >More info -0.46 >More info Col-0 whole plant Original data GEO bulk
59 flu 0.57 >More info 0.54 >More info WT Col Original data GEO bulk
60 BI-1-30min IAA 0.69 >More info 0.42 >More info BI-1-0h IAA whole plant Original data GEO bulk
61 PsJN -0.63 >More info -0.48 >More info Control inoculated with the PGPR bacterial model Burkholderia phytofirmans PsJN Plantlet Original data GEO bulk
62 ape2 high light -0.67 >More info -0.43 >More info Ws-2 high light Original data GEO bulk
63 gun1gun5 far-red pretreated -0.57 >More info -0.53 >More info WT far-red pretreated Original data GEO bulk
64 agb1 +ABA GC -0.58 >More info -0.52 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
65 npr1 sni1 brca2a SA 0.80 >More info 0.30 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
66 opr3 JA 2 h 0.49 >More info 0.61 >More info opr3 0 h Original data GEO bulk
67 amiR-tor induced 6d 0.44 >More info 0.65 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
68 tt4 UV -0.60 >More info -0.49 >More info UV aerial region Original data GEO bulk
69 Col-0 drought 0.57 >More info 0.52 >More info Col-0 control Original data GEO bulk
70 sid2-2 24hpi A. brassicicola 0.72 >More info 0.36 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
71 sid2-PsmES4326-24hpi 0.65 >More info 0.43 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
72 Whole root - S 3H 0.61 >More info 0.47 >More info Whole root - S 0H Original data GEO bulk
73 Col light-light EtOH 0.56 >More info 0.52 >More info Col light-light Mock 2.5% ethanol Original data GEO bulk
74 Homozygous-AtcesA4 0.70 >More info 0.38 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
75 sicy-192 gun1-101 cotyledons 0.61 >More info 0.47 >More info WT cotyledons cotyledons Original data
76 6-trichlorophenoxyacetic acid 3 h 0.47 >More info 0.61 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
77 ABA JA 3h 0.47 >More info 0.61 >More info EtOH 3h 3hr Original data GEO bulk
78 gai Control 0.59 >More info 0.48 >More info Laer Control leaf discs Original data GEO bulk
79 camta1/2/3 warm -0.69 >More info -0.38 >More info WT warm entire aerial part Original data GEO bulk
80 MYB76 OE 0.59 >More info 0.48 >More info WT for MYB29/76 Original data GEO bulk
81 Bay-0-3h IAA -0.67 >More info -0.39 >More info Bay-0-0h IAA whole plant Original data GEO bulk
82 WT seedlings MV 0.51 >More info 0.55 >More info WT seedlings control Seedlings Original data GEO bulk
83 Col-0 INA 48h -0.66 >More info -0.40 >More info Col-0 MOCK 48h Original data GEO bulk
84 sid2-2 mock 0.68 >More info 0.38 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
85 naxillin 3h 0.62 >More info 0.43 >More info before treatment naxillin root Original data GEO bulk
86 Laer treat paclobutrazol (PAC) 0.54 >More info 0.51 >More info Laer Control leaf discs Original data GEO bulk
87 OE WRKY63.3 high light -0.59 >More info -0.46 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
88 sdg8-2 mutant 0.65 >More info 0.40 >More info wild type leaf Original data GEO bulk
89 Col-0 DCA 6d -0.47 >More info -0.58 >More info Col-0 MOCK 6d Original data GEO bulk
90 Mutant siz1-3 -0.79 >More info -0.25 >More info Col-0 Original data GEO bulk
91 siz1-3 control -0.79 >More info -0.25 >More info Col-0 control Original data GEO bulk
92 WT Atum 2h -0.65 >More info -0.38 >More info WT 0h Leaf tissue Original data GEO bulk
93 ws 24h4c q8ws 0.70 >More info 0.33 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
94 T8 leaf-drought 0.65 >More info 0.38 >More info T8 leaf-well watered Original data GEO bulk
95 col 24h4c set4 0.69 >More info 0.34 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
96 A. lyrata 0.64 >More info 0.39 >More info A. thaliana mature leaves before flowering Original data GEO bulk
97 RRE2 Chitin 0.53 >More info 0.49 >More info Chitin Original data GEO bulk
98 sid2 0.67 >More info 0.35 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
99 rosette Light Wounded 0.56 >More info 0.46 >More info rosette Light Control Original data GEO bulk
100 coronatine 0.51 >More info 0.51 >More info control rosette leaves Original data
101 ABA DFPM 0.50 >More info 0.52 >More info control Original data GEO bulk
102 rosette Dark Wounded 0.49 >More info 0.53 >More info rosette Dark Control Original data GEO bulk
103 current injection 0.44 >More info 0.58 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
104 Leaf GLU1-KO 0.59 >More info 0.42 >More info Leaf Col(0) rosette leaves Original data GEO bulk
105 etr1 1% sucrose 12-day-old 0.56 >More info 0.45 >More info Col-0 1% sucrose 12-day-old Original data GEO bulk
106 sav3-2 light -0.57 >More info -0.44 >More info Col-0 light seedlings Original data GEO bulk
107 Mutant sav3-2 (WL) -0.57 >More info -0.44 >More info Col-0 (WL) Original data GEO bulk
108 ANOXIA -0.31 >More info -0.70 >More info ANOXIA+SUCROSE Original data GEO bulk
109 rsa3-1 Na 24h -0.58 >More info -0.42 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
110 camta1/2 warm -0.64 >More info -0.36 >More info WT 24h cold entire aerial part Original data GEO bulk
111 low water potential 0.66 >More info 0.34 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
112 B.cinerea 18 h infection 0.54 >More info 0.46 >More info Mock 18 h Original data Botrytis cinerea infection
113 Botrytis cinerea 18h 0.54 >More info 0.46 >More info control 18h Original data GEO bulk
114 OH1 -0.72 >More info -0.27 >More info Col-0 leaves Original data GEO bulk
115 Col0-PsmES4326-24hpi 0.38 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
116 camta3-2 -0.60 >More info -0.38 >More info WT Original data GEO bulk
117 RRE1 Chitin 0.58 >More info 0.40 >More info Chitin Original data GEO bulk
118 essp4/sdg8-5 mutant 0.55 >More info 0.43 >More info wild type leaf Original data GEO bulk
119 Cor hrpS 10h -0.36 >More info -0.62 >More info Mock 10h Cor hrpS Original data GEO bulk
120 mutant-line348 0.64 >More info 0.33 >More info WT-control whole plant Original data GEO bulk
121 Ws-2 high light 0.59 >More info 0.38 >More info Ws-2 low light Original data GEO bulk
122 Fenclorim 24hr 0.53 >More info 0.43 >More info Acetone 24hr root Original data GEO bulk
123 Mutant ufo-1(flower) -0.67 >More info -0.29 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
124 eds16 whole leaf 5dpi 0.65 >More info 0.31 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
125 smg7b-1 -0.69 >More info -0.27 >More info WT whole plant Original data GEO bulk
126 E.orontii Infection 3 day -0.53 >More info -0.43 >More info Uninfection 3 day Original data Elicitor treatments
127 atr mitomycin C 0.52 >More info 0.44 >More info WT mitomycin C shoot apical meristem Original data
128 cpr5 -0.70 >More info -0.26 >More info WT seedling Original data GEO bulk
129 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.55 >More info 0.41 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
130 Methyl Jasmonate 1 h 0.30 >More info 0.66 >More info Mock 1 h Original data Basic hormone treatment of seedlings
131 Ibuprofen 3 h 0.38 >More info 0.58 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
132 phyB mutant 22C 10hrs 0.37 >More info 0.59 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
133 Leafminer damaged seedlings 0.39 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
134 Fenclorim 4hr 0.53 >More info 0.42 >More info Acetone 4hr root Original data GEO bulk
135 high R/FR JA spray 0.43 >More info 0.52 >More info high R/FR mock spray high R/FR JA spray Original data GEO bulk
136 cell culture 4 h phytoprostane A1 0.56 >More info 0.38 >More info cell culture 4 h control Original data GEO bulk
137 Phytoprostane A1 4 h 0.40 >More info 0.54 >More info Col-0 Original data GEO bulk
138 dTLEc systemic wounding -0.63 >More info -0.31 >More info wt systemic wounding leaves Original data GEO bulk
139 rdr6-15 -0.63 >More info -0.31 >More info Col-0 plant inflorescence Original data
140 npr1-PsmES4326-24hpi 0.60 >More info 0.34 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
141 AmGSTF1 expressor -0.52 >More info -0.42 >More info WT leaf tissue Original data GEO bulk
142 FOX line K19624 -0.74 >More info -0.20 >More info empty vector control (T3) FOX lines Original data GEO bulk
143 ein3 eil1 0.54 >More info 0.39 >More info Col-0 mock Whole seedling Original data GEO bulk
144 35S::PI ap3-3 35S::AP-GR +DEX 0.26 >More info 0.67 >More info 0hr DEX Original data GEO bulk
145 GRX-overexpression seedlings IAA 0.38 >More info 0.55 >More info WT seedlings IAA Seedlings Original data GEO bulk
146 rosettes drought 0.60 >More info 0.33 >More info rosettes watered Original data GEO bulk
147 hexa mutant (higher order mutant) -0.70 >More info -0.23 >More info col control (higher order mutant) Original data GEO bulk
148 npr1 sni1 ssn2 SA 0.74 >More info 0.19 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
149 npr1 sni1 brca2a 0.60 >More info 0.32 >More info npr1 sni1 water water seedling Original data GEO bulk
150 sid2-1 cold 0.61 >More info 0.31 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
151 short 14-degree- 0.59 >More info 0.33 >More info control short Original data GEO bulk
152 WT NAA 2h -0.62 >More info -0.30 >More info WT 0h Leaf tissue Original data GEO bulk
153 4h decapitation 0.62 >More info 0.30 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
154 short 12-degree- 0.55 >More info 0.36 >More info control short Original data GEO bulk
155 penta Alternaria 3dpi 0.35 >More info 0.56 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
156 Mutant ag-12(flower) -0.62 >More info -0.29 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
157 T6 leaf-drought 0.59 >More info 0.32 >More info T6 leaf-well watered Original data GEO bulk
158 cat2-2; harvested 8h continiously maintained in
high CO2;		 0.70 >More info 0.21 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
159 pmr5 -0.70 >More info -0.21 >More info Col-0 rosette Original data GEO bulk
160 Wounding Stress3 h (shoot) 0.41 >More info 0.50 >More info Stress mock 3 h (shoot) Original data Stress treatments
161 Hydrogen Peroxide 500 uM 0.32 >More info 0.59 >More info Control RB and PER Hydrogen Peroxide Original data
162 CAX1/CAX3 mutant -0.63 >More info -0.27 >More info Col whole plant Original data GEO bulk
163 aln-1 0.72 >More info 0.18 >More info Col-0 Aerial part of seedlings Original data
164 GO5; 8h switch to ambient CO2 concentrations; 0.34 >More info 0.55 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
165 Chitin -0.66 >More info -0.23 >More info Col C Original data GEO bulk
166 wt systemic wounding 0.52 >More info 0.37 >More info wt control leaves Original data GEO bulk
167 46T-CK -0.37 >More info -0.52 >More info WT-CK none Original data
168 24h volatiles Sp. HRO-C48 -0.54 >More info -0.34 >More info 24h untreated whole seedling Original data GEO bulk
169 short 8-degree- 0.60 >More info 0.28 >More info control short Original data GEO bulk
170 rosettes myoox drought 0.53 >More info 0.35 >More info rosettes myoox watered Original data GEO bulk
171 hai1-2 0.60 >More info 0.28 >More info control control whole seedlings Original data GEO bulk
172 ABA 0.5 h 0.31 >More info 0.56 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
173 seed germinating in countinuous light 24h SL 0.20 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
174 root columella root cap 40 mM NaCl 0.51 >More info 0.36 >More info root columella root cap Original data GEO bulk
175 eds16 whole leaf 7dpi 0.61 >More info 0.26 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
176 35S:VND7-VP16-GR+CHX 0.21 >More info 0.66 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
177 agb1 gpa1 +ABA GC -0.54 >More info -0.32 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
178 phyABCDE 4-day dark- 2 hours Rc50 0.54 >More info 0.32 >More info phyABCDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
179 SCR-GR Time 12H Dex 0.58 >More info 0.28 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
180 rosettes WT drought 0.50 >More info 0.36 >More info rosettes WT watered Original data GEO bulk
181 root stele 40 mM NaCls 0.58 >More info 0.28 >More info root stele Original data GEO bulk
182 seedling -S Exp 0.70 >More info 0.16 >More info seedling FN Exp seedling Original data
183 protoplasts T1 [flg22] -0.36 >More info -0.50 >More info protoplasts T1 [CPK] mesophyll protoplasts Original data GEO bulk
184 35S::IaTCP -0.53 >More info -0.32 >More info thaliana control secondary inflorescence Original data
185 Mutant ga1-5 0.54 >More info 0.31 >More info Ler-1 Original data Comparison of plant hormone related mutant
186 M6PR transgenic leaf 100mM NaCl -0.33 >More info -0.52 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
187 Mutant clv3-7(flower) 0.62 >More info 0.23 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
188 Whole root - S 48H 0.50 >More info 0.35 >More info Whole root - S 0H Original data GEO bulk
189 irradiated leaf (WT 5d) 0.28 >More info 0.57 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
190 short 10-degree- 0.55 >More info 0.29 >More info control short Original data GEO bulk
191 col-5 DC3000-avrRpm 4h 0.67 >More info 0.17 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
192 Seedling KUA1-IOX est 0.28 >More info 0.56 >More info Seedling KUA1-IOX mock Original data
193 root protophloem 40 mM NaCl 0.60 >More info 0.24 >More info root protophloem Original data GEO bulk
194 arr-BA-sample -0.51 >More info -0.32 >More info Wt-BA-sample seedling Original data
195 bio4-1 mutant leaves -0.63 >More info -0.20 >More info WT leaves leaves Original data GEO bulk
196 WT resupplied Pi 4h 0.53 >More info 0.30 >More info WT complete seedlings Original data
197 miR393 0h -0.58 >More info -0.25 >More info WT 0h Leaf tissue Original data GEO bulk
198 Mutant lfy-12(flower) -0.62 >More info -0.20 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
199 Col leaf 100mM NaCl 0.56 >More info 0.26 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
200 Col leaf 100mM NaCl 0.56 >More info 0.26 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
201 Col 100mM NaCl 0.56 >More info 0.26 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
202 cat2-2; 8h switch to ambient CO2 concentrations; 0.27 >More info 0.55 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
203 Wt-BA-sample 0.59 >More info 0.23 >More info Wt-dmso-sample seedling Original data
204 pad2-PsmES4326-24hpi 0.70 >More info 0.11 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
205 sfr2 control -0.60 >More info -0.21 >More info WT control All aerial tissue Original data GEO bulk
206 WT (Col-0) inflorescence moderate drought day 10 0.50 >More info 0.30 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
207 A. thaliana-A. lyrata hybrid 0.60 >More info 0.20 >More info A. thaliana mature leaves before flowering Original data GEO bulk
208 edr1 36 h powdery mildew -0.63 >More info -0.17 >More info Col-0 36 h powdery mildew Original data GEO bulk
209 naxillin 6h 0.59 >More info 0.21 >More info before treatment naxillin root Original data GEO bulk
210 OE WRKY63.3 -0.52 >More info -0.27 >More info OE WRKY40.4 none leaf Original data GEO bulk
211 edr1 18 h powdery mildew -0.63 >More info -0.16 >More info Col-0 18 h powdery mildew Original data GEO bulk
212 Ambient CO2 expanding leaf -0.54 >More info -0.25 >More info Control for tissue data expanding leaf Original data
213 hepta mutant (higher order mutant) -0.69 >More info -0.10 >More info col control (higher order mutant) Original data GEO bulk
214 agb1 -ABA GC -0.59 >More info -0.19 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
215 Whole root - S 72H 0.50 >More info 0.28 >More info Whole root - S 0H Original data GEO bulk
216 cat2-long-day 2d 0.66 >More info 0.12 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
217 nhx5 -0.73 >More info -0.05 >More info WT Rosette leaf Original data GEO bulk
218 WT cold 12 h 0.54 >More info 0.24 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
219 vte2 leaves 0h LT -0.54 >More info -0.24 >More info Col leaves 0h LT h 9-11th adult leaves Original data
220 Ambient CO2 fully expanded leaf -0.58 >More info -0.20 >More info Control for tissue data fully expanded leaf Original data
221 aba3-1 -0.70 >More info -0.07 >More info wt Original data GEO bulk
222 control leaf (cmt 1d) -0.50 >More info -0.27 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
223 phr1 phl1 Root-Pi 0.53 >More info 0.24 >More info WT Shoot+Pi roots Original data GEO bulk
224 slr-1 0h NAA -0.54 >More info -0.23 >More info Col-0 0h NAA Original data GEO bulk
225 elevated CO2 high Mg shoot -0.53 >More info -0.24 >More info atmospheric CO2 high Mg shoot Shoot Original data
226 BR -0.66 >More info -0.11 >More info WT-mock BR dark-grown seedlings Original data GEO bulk
227 tbf1-mock infiltration 0.65 >More info 0.12 >More info WT-mock infiltration water for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
228 Col whole leaf 7dpi -0.69 >More info -0.08 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
229 cat2-2; 0h switch to ambient CO2 concentrations; 0.56 >More info 0.20 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
230 Distal half (leaf7) -0.59 >More info -0.17 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
231 WT 24H Cold 0.50 >More info 0.26 >More info WT control Original data GEO bulk
232 Dex-rga(delta17) 2h GA4 0.54 >More info 0.22 >More info Vector 4h GA4 shoots Original data GEO bulk
233 prmt5-5 0.54 >More info 0.22 >More info WT Col continuous light Aerial tissue Original data GEO bulk
234 C24 UV1 0.57 >More info 0.19 >More info C24 mock UV seedling Original data
235 root cells stele 140mM NaCl 3 hours 0.58 >More info 0.18 >More info root cells stele standard 1 hour root cells stele Original data
236 upf1 -0.57 >More info -0.18 >More info WT whole plant Original data GEO bulk
237 Col-O low light -0.53 >More info -0.22 >More info Col-O bule light Original data GEO bulk
238 Rosette leaf No2 -0.60 >More info -0.15 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
239 spx1 spx2 resupplied Pi 4h 0.51 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
240 leaf13 0.16 >More info 0.59 >More info unwounded leaves none Original data GEO bulk
241 Dex-rga(delta17) 4h GA4 0.53 >More info 0.21 >More info Vector 4h GA4 shoots Original data GEO bulk
242 Leaf -0.59 >More info -0.15 >More info Control for tissue data leaf Original data GEO bulk
243 calcicole ecotype Cal-0 -0.65 >More info -0.09 >More info Col-4 1 mM CaCl2 Original data GEO bulk
244 Rosette leaf No12 -0.53 >More info -0.21 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
245 arr10 arr12 tZ -0.56 >More info -0.18 >More info WT tZ Original data GEO bulk
246 hsfa1 quadruple mutant 0.50 >More info 0.24 >More info WT (Col-0) whole seedling Original data GEO bulk
247 Pst-DC3000(avrRpm1)-4hpi 0.10 >More info 0.64 >More info Pst-DC3000-4hpi Original data GEO bulk
248 S58-2 -0.65 >More info -0.08 >More info wt Original data GEO bulk
249 DC3000 2 h (leaf) 0.59 >More info 0.14 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
250 Dark 3day ivd 0.51 >More info 0.22 >More info 0h ivd Original data
251 essp3/brm5 mutant 0.58 >More info 0.15 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
252 Col whole leaf 5dpi -0.57 >More info -0.16 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
253 PRR5-VP 18h light on 0.62 >More info 0.11 >More info WT 18h light on whole plant Original data GEO bulk
254 bio4-1 mutant watered00µM biotin leaves 0.56 >More info 0.16 >More info bio4-1 mutant leaves leaves Original data GEO bulk
255 ex2 flu dark 8hours/30 minute light 0.55 >More info 0.17 >More info col dark 8hours/30 minute light Original data GEO bulk
256 Proximalhalf (leaf7) -0.54 >More info -0.18 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
257 Heat shock optimum 0.07 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
258 Cotyledons -0.55 >More info -0.16 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
259 3x(m) -0.54 >More info -0.17 >More info 2x two week old seedlings Original data
260 RPL18 TuMV inoculated polysomal RNA -0.61 >More info -0.10 >More info mock inoculated polysomal RNA PO Original data GEO bulk
261 camta1/2/3 24h cold -0.51 >More info -0.20 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
262 pvip1 pvip2 -0.58 >More info -0.13 >More info Col-0 whole rosettes Original data GEO bulk
263 cat2-long-day 4d 0.56 >More info 0.14 >More info Col0-LD4 transferred to air (400 ppm) for 4 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
264 vtc2 (I) -0.50 >More info -0.20 >More info Col (I) rosette Original data GEO bulk
265 cpr5 -0.51 >More info -0.19 >More info WT(COL) Original data GEO bulk
266 ga1-3/brm-1 0.53 >More info 0.16 >More info wt shoots Original data GEO bulk
267 HS 0.54 >More info 0.15 >More info noneHS Original data GEO bulk
268 arf6 arf8 stage2 -0.51 >More info -0.18 >More info WT stage2 Original data GEO bulk
269 csn5 (csn5a-2 csn5b) dark -0.53 >More info -0.15 >More info WT dark Original data GEO bulk
270 SCL3 OE 0.56 >More info 0.12 >More info Col-0 whole root Original data GEO bulk
271 pnp1-1 3h +P 0.55 >More info 0.13 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
272 smg5-2 -0.51 >More info -0.17 >More info WT whole plant Original data GEO bulk
273 4x -0.56 >More info -0.12 >More info 2x two week old seedlings Original data
274 Cauline leaves -0.55 >More info -0.13 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
275 atmospheric CO2 high Mg root 0.59 >More info 0.09 >More info atmospheric CO2 normal Mg root Root Original data
276 brm-1 0.58 >More info 0.10 >More info wt shoots Original data GEO bulk
277 npr1 sni1 SA -0.62 >More info -0.06 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
278 21h-DC3000 hrpA -0.08 >More info -0.60 >More info 21h-DC3000 leaves Original data GEO bulk
279 Est -0.66 >More info -0.01 >More info Col-0 Original data GEO bulk
280 ML (Mature leaves) 35DAS -0.51 >More info -0.16 >More info Control for tissue data Original data GEO bulk
281 Col-0 24hpi A. brassicicola 0.65 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
282 Rsch 8h 0.11 >More info 0.56 >More info Rsch CA Leaves Original data
283 pab total -0.51 >More info -0.15 >More info WT total seedling shoot/aerial seedling Original data
284 WT-SA -0.53 >More info -0.13 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
285 Col laser microdissected 5 dpi -0.56 >More info -0.10 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
286 atgsnor1-1-avrB-6h -0.66 >More info 0.00 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
287 Col-0 (t-zeatin 3 h) 0.65 >More info 0.01 >More info Col-0 Original data Cytokinin treatment of seedlings
288 ptpks2 -0.60 >More info -0.06 >More info Col-WT leaves Original data GEO bulk
289 csn4-1 mutant -0.59 >More info -0.07 >More info WT dark Original data GEO bulk
290 Total RNA 35S:HF-RPL18 cold -0.59 >More info -0.07 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
291 cop1 Seedling BL+ABA 0.08 >More info 0.58 >More info WT Seedling BL+ABA Original data GEO bulk
292 gun1gun5 drak pretreated -0.51 >More info -0.14 >More info WT drak pretreated Original data GEO bulk
293 miR mutant (higher order mutant) -0.53 >More info -0.12 >More info col control (higher order mutant) Original data GEO bulk
294 Senescing leaf -0.56 >More info -0.09 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
295 clf-28 0.56 >More info 0.08 >More info Col whole plant Original data GEO bulk
296 pip3 At2g19270 RNAi 24 0.52 >More info 0.12 >More info Nd-1 whole plant Original data GEO bulk
297 seedlings + TSA -0.56 >More info -0.08 >More info control seedlings 10-day old whole seedling Original data GEO bulk
298 CCA1-ox 6am non-polysomal 0.13 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
299 wrky72-2-MOCK 0.54 >More info 0.09 >More info WT-MOCK Original data GEO bulk
300 sex1-3 -0.61 >More info -0.02 >More info Col-WT leaves Original data GEO bulk
301 Elevated CO2 expanding leaf -0.54 >More info -0.09 >More info Ambient CO2 expanding leaf expanding leaf Original data
302 Cold Stress 24 h (root) 0.51 >More info 0.12 >More info Stress mock 24 h (root) Original data Stress treatments
303 rdr6-11 ein5-1 ski2-3 -0.58 >More info -0.05 >More info Col-0 aerial tissue Original data
304 green tissue gl3 egl3 0.56 >More info 0.06 >More info green tissue WT L. er Original data GEO bulk
305 edr1 0 h powdery mildew -0.58 >More info -0.04 >More info Col-0 0 h powdery mildew Original data GEO bulk
306 WT NAA/flg 2h -0.59 >More info -0.03 >More info WT 0h Leaf tissue Original data GEO bulk
307 OsTOP6A3 ox 0.54 >More info 0.08 >More info WT Original data GEO bulk
308 35S::ERF104 Flg22 4h -0.53 >More info -0.09 >More info 35S::ERF104 H2O 4h Original data GEO bulk
309 pmr4-1 powdery mildew -0.65 >More info 0.03 >More info WT powdery mildew uninoculated Original data GEO bulk
310 pGL1::GL1-GR Dex 24hours -0.08 >More info -0.54 >More info pGL1::GL1-GR mock 24hours Original data GEO bulk
311 tbf1-mock spray 0.55 >More info 0.06 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
312 mkk1/mkk2 control rep -0.54 >More info -0.07 >More info Col-0 Time 0 rep Original data GEO bulk
313 miR393 flg22 2h -0.60 >More info -0.01 >More info WT 0h Leaf tissue Original data GEO bulk
314 eds16 laser microdissected 5 dpi 0.59 >More info 0.02 >More info Col laser microdissected 5 dpi LMD leaf epidermal and mesophyll cells Original data GEO bulk
315 wrky72-1-MOCK 0.54 >More info 0.06 >More info WT-MOCK Original data GEO bulk
316 rgs1+sucrose -0.51 >More info -0.09 >More info WT+sucrose rosette leaves Original data GEO bulk
317 Dark 2day ivd 0.61 >More info -0.01 >More info 0h ivd Original data
318 Mutant ap1-15(flower) -0.50 >More info -0.10 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
319 Bur-0-1h IAA -0.61 >More info 0.01 >More info Bur-0h IAA whole plant Original data GEO bulk
320 C24-1h IAA -0.54 >More info -0.05 >More info C24-0h IAA whole plant Original data GEO bulk
321 Polysomal RNA 35S:HF-RPL18 cold -0.55 >More info -0.04 >More info Polysomal RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
322 WT light -0.51 >More info -0.08 >More info WT dark Original data GEO bulk
323 pip3 At2g19270 RNAi 32 0.52 >More info 0.06 >More info Nd-1 whole plant Original data GEO bulk
324 WT Atum 1h -0.50 >More info -0.08 >More info WT 0h Leaf tissue Original data GEO bulk
325 Leaf systemic -0.63 >More info 0.06 >More info Leaf control vegetative leaf Original data GEO bulk
326 upf3 -0.57 >More info -0.00 >More info WT whole plant Original data GEO bulk
327 Laer pretreat GA Flg22 1h -0.14 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
328 overexpresser LBD38 in -N 0.55 >More info 0.01 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
329 LTN008-2 aza-dc -0.55 >More info -0.01 >More info LTN012-2 Mock Original data
330 Est SA -0.64 >More info 0.08 >More info Col-0 SA Original data GEO bulk
331 MYB12OX -0.51 >More info -0.05 >More info Col-0 aerial part Original data
332 P-chlorophenoxy- isobutyric acid 3 h 0.03 >More info 0.53 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
333 aux1 mutant roots air -0.52 >More info -0.03 >More info roots IAA Original data GEO bulk
334 overexpresser LBD37 in -N 0.51 >More info 0.03 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
335 CBF3 0mM NaCl 0.51 >More info 0.02 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
336 atgsnor1-1 0.73 >More info -0.20 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
337 GO5; harvested 8h continiously maintained in high
CO2;		 0.54 >More info -0.01 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
338 fls1-3 -0.06 >More info 0.59 >More info Col-0 Rosette leaves Original data
339 S15-118 -0.58 >More info 0.05 >More info wt Original data GEO bulk
340 GA -0.52 >More info 0.00 >More info none GA Rosette Original data GEO bulk
341 DC3000 24h -0.08 >More info 0.60 >More info Mock 24h DC3000 Original data GEO bulk
342 ein3-1eil1-1 dark 0.63 >More info -0.12 >More info Wt dark whole 4-day old etiolated seedlings Original data GEO bulk
343 Light 3day ivd -0.58 >More info 0.07 >More info 0h ivd Original data
344 mdh 0.54 >More info -0.04 >More info Col Original data GEO bulk
345 dark +H2O2 0.50 >More info -0.00 >More info dark 5 mM H2O2 seedling Original data GEO bulk
346 17 2h total 0.55 >More info -0.05 >More info 27 1h total 1.5mM 4SU added at h whole seedlings floating on MS medium Original data
347 35S:RPS4 eds1-2 2h 0.57 >More info -0.07 >More info 35S:RPS4 2h leaves Original data
348 entire vegetative rosette -0.58 >More info 0.09 >More info Col-0 Mock WL entire vegetative rosette Original data
349 nhx5-2/nhx6 -0.56 >More info 0.09 >More info WT Rosette leaf Original data GEO bulk
350 nas4x leaves + Fe -0.56 >More info 0.09 >More info WT leaves + Fe Leaves Original data GEO bulk
351 4C 2h(SOIL) -0.61 >More info 0.15 >More info 4C 0h(SOIL) Original data GEO bulk
352 21h-DC3000 avrRpm1 0.11 >More info -0.57 >More info 21h-DC3000 leaves Original data GEO bulk
353 irradiated leaf (WT 1d) -0.50 >More info 0.05 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
354 root - 01% oxygen - 30min -0.58 >More info 0.17 >More info root - 21% oxygen - 30min Original data GEO bulk
355 penta Pst DC3000 12hpi -0.53 >More info 0.13 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
356 Shoot apex inflorescence (after bolting) -0.25 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
357 stn7-1 0.51 >More info -0.13 >More info Col-0 rosette leaves Original data GEO bulk
358 ABA 0.60 >More info -0.22 >More info control Original data GEO bulk
359 bri1-116 -0.36 >More info 0.73 >More info Col seedling Original data GEO bulk
360 siliques AtHb1 control -0.19 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
361 IAA7mII over-expressor IAA Treated -0.36 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
362 sex4-3 -0.52 >More info 0.22 >More info Col-WT leaves Original data GEO bulk
363 ataf1-1 mutant Col-0 Un-inoculated 0.51 >More info -0.22 >More info WT Col-0 Un-inoculated Original data GEO bulk
364 miR 0h -0.54 >More info 0.25 >More info Col 0h Leaf Original data GEO bulk
365 root - 04% oxygen - 30min -0.51 >More info 0.23 >More info root - 21% oxygen - 30min Original data GEO bulk
366 pGL3::GL3-GR Dex 24hours 0.61 >More info -0.49 >More info pGL3::GL3-GR mock 24hours Original data GEO bulk
367 0.5h light (+Lincomycin) -0.53 >More info 0.45 >More info 0.5h light (-Lincomycin) seedlings Original data GEO bulk
368 Col BTH -0.65 >More info 0.67 >More info Col rosettes Original data GEO bulk