4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on Octopus overexpressor 35SDYG25
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "Octopus overexpressor 35SDYG25"  Help Download transcriptome of top 30
Score Experiment Correlation from
Octopus overexpressor 35SDYG25		 Correlation to
Octopus overexpressor 35SDYG25		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Octopus overexpressor 35SDYG25 1.00 >More info 1.00 >More info WS Original data GEO bulk
2 downy mildew cotyledons late stage 0.69 >More info 0.75 >More info mock inoculated Cotyledons Original data GEO bulk
3 BLM+INA 0.72 >More info 0.71 >More info CK BLM and INA seedling Original data
4 Col-0 INA 48h 0.68 >More info 0.72 >More info Col-0 MOCK 48h Original data GEO bulk
5 Cor hrpS 10h 0.67 >More info 0.73 >More info Mock 10h Cor hrpS Original data GEO bulk
6 UV Stress 24 h (shoot) 0.68 >More info 0.69 >More info Stress mock 24 h (shoot) Original data Stress treatments
7 NahG -0.61 >More info -0.75 >More info Col-0 Leaves Original data GEO bulk
8 seedlings-week-old RECA1-overexpressing
transgenic		 0.69 >More info 0.67 >More info seedlings-week-old Col-0 seedlings Original data
9 Mutant NahG(leaf) -0.63 >More info -0.72 >More info Col-0 (leaf) Original data GEO bulk
10 camta1/3 warm 0.65 >More info 0.68 >More info WT warm entire aerial part Original data GEO bulk
11 cpr5 0.68 >More info 0.65 >More info WT(COL) Original data GEO bulk
12 bio4-1 mutant leaves 0.74 >More info 0.59 >More info WT leaves leaves Original data GEO bulk
13 cpr5npr1 0.66 >More info 0.66 >More info WT(COL) Original data GEO bulk
14 Light 3day wt -0.66 >More info -0.66 >More info 0h wt Original data
15 cpr5 0.67 >More info 0.64 >More info WT seedling Original data GEO bulk
16 camta1/2/3 warm 0.64 >More info 0.66 >More info WT warm entire aerial part Original data GEO bulk
17 edr1 18 h powdery mildew 0.68 >More info 0.62 >More info Col-0 18 h powdery mildew Original data GEO bulk
18 camta1/2/3 24h cold 0.65 >More info 0.64 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
19 Mutant siz1-3 0.66 >More info 0.62 >More info Col-0 Original data GEO bulk
20 Cor 24h 0.65 >More info 0.63 >More info Mock 24h Cor Original data GEO bulk
21 WT-SA 0.67 >More info 0.61 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
22 siz1-3 control 0.66 >More info 0.62 >More info Col-0 control Original data GEO bulk
23 camta3-2 0.58 >More info 0.70 >More info WT Original data GEO bulk
24 Col BTH 0.60 >More info 0.67 >More info Col rosettes Original data GEO bulk
25 pepr1-1 Pepr2-3 +Pep2 10h -0.71 >More info -0.56 >More info WT +Pep2 10h Pep2 Original data GEO bulk
26 Laer pretreat JA Flg22 0h -0.55 >More info -0.72 >More info Laer pretreat water control leaf discs Original data GEO bulk
27 efr-1 +elf18 10h -0.69 >More info -0.58 >More info WT +elf18 10h elf18 Original data GEO bulk
28 sid2-1 cold -0.64 >More info -0.63 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
29 phyB mutant 22C 10hrs -0.54 >More info -0.73 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
30 cpr5scv1 0.63 >More info 0.63 >More info WT(COL) Original data GEO bulk
31 S58-2 0.60 >More info 0.66 >More info wt Original data GEO bulk
32 Col whole leaf 5dpi 0.61 >More info 0.65 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
33 camta2/3 warm 0.60 >More info 0.65 >More info WT warm entire aerial part Original data GEO bulk
34 CMV-WT 0.63 >More info 0.62 >More info Mock-At Aerial tissues Original data GEO bulk
35 smg7b-1 0.59 >More info 0.66 >More info WT whole plant Original data GEO bulk
36 Col whole leaf 7dpi 0.64 >More info 0.61 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
37 bio4-1 mutant watered00µM biotin leaves -0.65 >More info -0.60 >More info bio4-1 mutant leaves leaves Original data GEO bulk
38 Elevated CO2 AMPLE N DAY 0.61 >More info 0.64 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
39 INA 0.47 >More info 0.78 >More info CK INA seedling Original data
40 BLM 0.73 >More info 0.51 >More info CK BLM seedling Original data
41 S15-118 0.54 >More info 0.70 >More info wt Original data GEO bulk
42 oas-a1.1 Cd 18h 0.52 >More info 0.71 >More info Cd 18h root Root Original data GEO bulk
43 SA 0.63 >More info 0.60 >More info WT mock Whole seedling Original data GEO bulk
44 eds16 whole leaf 5dpi -0.54 >More info -0.69 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
45 Mutant siz1-3 (Drought) 0.66 >More info 0.57 >More info Col-0 (Drought) Original data GEO bulk
46 Col-0 INA 6d 0.56 >More info 0.67 >More info Col-0 MOCK 6d Original data GEO bulk
47 OH1 0.60 >More info 0.63 >More info Col-0 leaves Original data GEO bulk
48 siz1-3 drought 0.66 >More info 0.57 >More info Col-0 drought Original data GEO bulk
49 eds16 whole leaf 0h UI -0.49 >More info -0.74 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
50 sni1 0.47 >More info 0.76 >More info WT Original data GEO bulk
51 plant (tga2-5-6) 4h control 0.68 >More info 0.53 >More info plant (Col-0) 4h control Original data GEO bulk
52 8hr-pH4.5 0.60 >More info 0.61 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
53 Mutant tga2_5_6 0.68 >More info 0.53 >More info Col-0 Original data GEO bulk
54 sid2 -0.64 >More info -0.56 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
55 bZIP1ko mutant N+Light- 0.77 >More info 0.43 >More info WT-sib N+Light- whole plant Original data GEO bulk
56 35S:RPS4 eds1-2 24h -0.66 >More info -0.53 >More info 35S:RPS4 24h leaves Original data
57 edr1 36 h powdery mildew 0.60 >More info 0.59 >More info Col-0 36 h powdery mildew Original data GEO bulk
58 Col-0 DCA 48h 0.57 >More info 0.62 >More info Col-0 MOCK 48h Original data GEO bulk
59 SA 24h 0.41 >More info 0.78 >More info EtOH 24h 24hr Original data GEO bulk
60 Elevated CO2 AMPLE N NIGHT 0.54 >More info 0.64 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
61 upf3 0.55 >More info 0.63 >More info WT whole plant Original data GEO bulk
62 DFPM 0.72 >More info 0.46 >More info control Original data GEO bulk
63 aba3-1 0.49 >More info 0.69 >More info wt Original data GEO bulk
64 bak1-3 +Pep2 10h 0.64 >More info 0.53 >More info WT +Pep2 10h Pep2 Original data GEO bulk
65 P.p 30hai 0.75 >More info 0.42 >More info At-Control roots Original data GEO bulk
66 pmr5 pmr6 0.49 >More info 0.67 >More info Col-0 Original data GEO bulk
67 upf1 0.57 >More info 0.59 >More info WT whole plant Original data GEO bulk
68 mkk1/mkk2 control rep 0.57 >More info 0.59 >More info Col-0 Time 0 rep Original data GEO bulk
69 rsa3-1 Na 24h 0.43 >More info 0.73 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
70 A6 mutant 0.65 >More info 0.50 >More info WT rosette leaves Rosette leaves Original data GEO bulk
71 gh3.5D uninoculated -0.58 >More info -0.57 >More info Col-0 48 hpi Original data GEO bulk
72 CLO 4mM 0.53 >More info 0.61 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
73 eds16 whole leaf 7d UI -0.56 >More info -0.58 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
74 ceh1 mutant 0.53 >More info 0.61 >More info Parent line Original data
75 R. solani AG8 0.67 >More info 0.47 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
76 toc1-1-49hr 0.57 >More info 0.57 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
77 P.p 6hai 0.68 >More info 0.45 >More info At-Control roots Original data GEO bulk
78 eds16 whole leaf 6hpi -0.55 >More info -0.58 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
79 OE WRKY63.3 high light 0.60 >More info 0.53 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
80 35S:RPS4 eds1-2 8h -0.56 >More info -0.57 >More info 35S:RPS4 8h leaves Original data
81 WT-NOCO2 INFECTED 0.62 >More info 0.50 >More info WT-MOCK Original data GEO bulk
82 LTN008-2 aza-dc 0.64 >More info 0.48 >More info LTN012-2 Mock Original data
83 pvip1 pvip2 0.56 >More info 0.56 >More info Col-0 whole rosettes Original data GEO bulk
84 wavy 0.44 >More info 0.67 >More info WT Original data GEO bulk
85 RPL18 TuMV inoculated polysomal RNA 0.58 >More info 0.53 >More info mock inoculated polysomal RNA PO Original data GEO bulk
86 P.p 10.5hai 0.70 >More info 0.41 >More info At-Control roots Original data GEO bulk
87 P.p 2.5hai 0.64 >More info 0.47 >More info At-Control roots Original data GEO bulk
88 ape2 high light 0.57 >More info 0.54 >More info Ws-2 high light Original data GEO bulk
89 Chitosan 3h Treatment 0.62 >More info 0.49 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
90 4h decapitation -0.49 >More info -0.62 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
91 Col ozone 2d 0.53 >More info 0.57 >More info Col clean-air 2d ozone Original data GEO bulk
92 Whole root - low pH 12H 0.50 >More info 0.60 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
93 overexpresser LBD38 in -N -0.69 >More info -0.41 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
94 hira-root -0.56 >More info -0.53 >More info WT-root root Original data
95 smg5-2 0.53 >More info 0.56 >More info WT whole plant Original data GEO bulk
96 toc1-1-65hr 0.51 >More info 0.58 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
97 edr1 0 h powdery mildew 0.62 >More info 0.47 >More info Col-0 0 h powdery mildew Original data GEO bulk
98 npr1 sni1 ssn2 SA -0.62 >More info -0.47 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
99 cpr5npr1svi1 0.57 >More info 0.52 >More info WT(COL) Original data GEO bulk
100 sav3-2 light 0.51 >More info 0.58 >More info Col-0 light seedlings Original data GEO bulk
101 Mutant sav3-2 (WL) 0.51 >More info 0.58 >More info Col-0 (WL) Original data GEO bulk
102 seedlings +5AC 0.63 >More info 0.45 >More info control seedlings 10-day old whole seedling Original data GEO bulk
103 20d after anthesis 0.59 >More info 0.49 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
104 npr1-PsmES4326-24hpi -0.59 >More info -0.49 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
105 npr1-1 SA -0.65 >More info -0.42 >More info Col-0 SA complete seedling Original data
106 WT +elf18 10h 0.65 >More info 0.42 >More info WT untreated elf18 Original data GEO bulk
107 WT powdery mildew 0.53 >More info 0.54 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
108 csn5 (csn5a-2 csn5b) light 0.64 >More info 0.43 >More info WT light Original data GEO bulk
109 camta3-1 0.50 >More info 0.57 >More info WT Original data GEO bulk
110 R. solani AG2-1 0.59 >More info 0.47 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
111 OE WRKY63.3 0.59 >More info 0.47 >More info OE WRKY40.4 none leaf Original data GEO bulk
112 D2O 0.60 >More info 0.46 >More info H2O seedling Original data GEO bulk
113 lht1 PstDC3000 48h 0.63 >More info 0.43 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
114 glk1 glk2 GLK1-GR +DEX 24h -0.79 >More info -0.27 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
115 E.orontii Infection 3 day 0.45 >More info 0.61 >More info Uninfection 3 day Original data Elicitor treatments
116 atgsnor1-1 -0.62 >More info -0.43 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
117 root Dosed gold 0.60 >More info 0.45 >More info root No gold .125 mM gold 24 h roots Original data
118 AgNO3 3 h 0.53 >More info 0.52 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
119 dense canopy 0.54 >More info 0.51 >More info single (control) petiole Original data GEO bulk
120 0.125 mM gold 24 h 0.60 >More info 0.45 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
121 WT in -N 0.70 >More info 0.35 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
122 pepr1-1 Pepr2-3 +Pep2 2h -0.47 >More info -0.58 >More info WT +Pep2 2h Pep2 Original data GEO bulk
123 cat2-hCO2 -0.60 >More info -0.44 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
124 Salicylic Acid 3 h 0.44 >More info 0.60 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
125 A. thaliana-A. lyrata hybrid -0.49 >More info -0.55 >More info A. thaliana mature leaves before flowering Original data GEO bulk
126 BI-1-30min IAA -0.57 >More info -0.46 >More info BI-1-0h IAA whole plant Original data GEO bulk
127 IMI 4mM 0.54 >More info 0.49 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
128 toc1-1-53hr 0.55 >More info 0.48 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
129 Col-0 48 hpi 0.47 >More info 0.56 >More info Col-0 uninoculated Original data GEO bulk
130 del1-1 mutant 5d uninfected 0.48 >More info 0.55 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
131 sid2-2 safener -0.55 >More info -0.47 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
132 npr1 sni1 ssn2 -0.57 >More info -0.45 >More info npr1 sni1 water water seedling Original data GEO bulk
133 8h-DC3000 avrRpm1 0.54 >More info 0.48 >More info 8h-DC3000 leaves Original data GEO bulk
134 Mutant sav3-2 (SH) 0.49 >More info 0.53 >More info Col-0 (SH) Original data GEO bulk
135 Col0-PsmES4326-24hpi 0.41 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
136 Whole root - low pH 3H 0.44 >More info 0.58 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
137 WT 2-4h Xanthomonas 0.49 >More info 0.53 >More info WT T0 Original data GEO bulk
138 sav3-2 shade 0.49 >More info 0.53 >More info Col-0 shade seedlings Original data GEO bulk
139 aox1a:rpoTmp untreated 0.52 >More info 0.49 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
140 RPL18 TuMV inoculated total RNA 0.55 >More info 0.46 >More info mock inoculated total RNA PO Original data GEO bulk
141 UV 0.64 >More info 0.37 >More info WT aerial region Original data GEO bulk
142 cngc4 0.37 >More info 0.64 >More info Ws-2 Seedlings Original data GEO bulk
143 erf5 erf6 -0.53 >More info -0.47 >More info WT+water water seedlings Original data GEO bulk
144 npr1-3 DCA 48h 0.52 >More info 0.48 >More info npr1-3 MOCK 48h Original data GEO bulk
145 A. lyrata -0.52 >More info -0.48 >More info A. thaliana mature leaves before flowering Original data GEO bulk
146 npr1 sni1 brca2a SA -0.61 >More info -0.39 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
147 -Sulfate 24 h 0.37 >More info 0.63 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
148 SCR-GR Time 1H Dex 0.44 >More info 0.56 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
149 low CO2 + light 0.35 >More info 0.65 >More info normal CO2 + light Original data GEO bulk
150 ataf1-1 mutant Col-0 Bgh inoculated 0.50 >More info 0.49 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
151 cs26 long day 0.45 >More info 0.54 >More info Leaves-WT-LD leaf Original data GEO bulk
152 toc1-1-85hr 0.43 >More info 0.56 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
153 Nicotinamide-57hr 0.44 >More info 0.55 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
154 coi1-2 0.42 >More info 0.57 >More info Col-0 mock Whole seedling Original data GEO bulk
155 CAX1/CAX3 mutant 0.47 >More info 0.52 >More info Col whole plant Original data GEO bulk
156 Col ozone 3h 0.39 >More info 0.60 >More info Col clean-air 3h ozone Original data GEO bulk
157 oligomycin 4 h 0.48 >More info 0.51 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
158 3x(p) 0.42 >More info 0.57 >More info 2x two week old seedlings Original data
159 wrky33 Bc inoculation 14h 0.65 >More info 0.33 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
160 CMP 24hr 0.54 >More info 0.44 >More info Acetone 24hr root Original data GEO bulk
161 ORS1 induced 0.43 >More info 0.55 >More info mock-induced rosette leaves Original data GEO bulk
162 bri1-116 0.25 >More info 0.73 >More info Col seedling Original data GEO bulk
163 lht1 untreated 0.54 >More info 0.43 >More info WT untreated untreated leaf Original data GEO bulk
164 Tsu -Fe 24h Shoots 0.59 >More info 0.38 >More info Tsu +Fe 24h Shoots Original data GEO bulk
165 FOX line K19624 0.63 >More info 0.34 >More info empty vector control (T3) FOX lines Original data GEO bulk
166 nas4x leaves + Fe 0.62 >More info 0.35 >More info WT leaves + Fe Leaves Original data GEO bulk
167 B.cinerea 18 h infection 0.51 >More info 0.46 >More info Mock 18 h Original data Botrytis cinerea infection
168 Botrytis cinerea 18h 0.51 >More info 0.46 >More info control 18h Original data GEO bulk
169 Heat Recovery 24 h (root) 0.45 >More info 0.52 >More info Stress mock 24 h (root) Original data Stress treatments
170 GA 120min 0.44 >More info 0.53 >More info CON120 GA 120 min. root tips Original data GEO bulk
171 SA 3h 0.33 >More info 0.64 >More info EtOH 3h 3hr Original data GEO bulk
172 Elevated CO2 fully expanded leaf 0.59 >More info 0.37 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
173 csn3-1 light 0.60 >More info 0.36 >More info WT light Original data GEO bulk
174 16C 4hs -0.52 >More info -0.44 >More info L22-4hrs whole plant excluding roots Original data GEO bulk
175 oxt6 mutant -0.57 >More info -0.39 >More info WT Original data GEO bulk
176 OE-HRA1 NS  0.60 >More info 0.36 >More info Col-0NS 2 h non-stress (2NS) 7-day-old seedlings Original data
177 pmr4-1 powdery mildew 0.55 >More info 0.41 >More info WT powdery mildew uninoculated Original data GEO bulk
178 Octopus mutant DYG25 0.45 >More info 0.51 >More info WS Original data GEO bulk
179 eds16 whole leaf 1dpi -0.41 >More info -0.55 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
180 Laer pretreat GA Flg22 1h 0.25 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
181 toc1-1-81hr 0.41 >More info 0.55 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
182 Bay-0-30min IAA 0.62 >More info 0.33 >More info Bay-0-0h IAA whole plant Original data GEO bulk
183 0.5h light (+Lincomycin) 0.50 >More info 0.45 >More info 0.5h light (-Lincomycin) seedlings Original data GEO bulk
184 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.62 >More info -0.33 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
185 iae1 -0.53 >More info -0.42 >More info B179 Original data GEO bulk
186 csn4-1 dark 0.59 >More info 0.36 >More info WT light Original data GEO bulk
187 dicamba 0.54 >More info 0.41 >More info WT mock whole seedling Original data GEO bulk
188 P.syringae AvrRpt2 4 h (leaf) 0.44 >More info 0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
189 cs26 short-day -0.42 >More info -0.53 >More info Leaves-WT-SD leaf Original data GEO bulk
190 6h +Pi -0.45 >More info -0.50 >More info 6h -Pi root Original data GEO bulk
191 msh1 albino 0.45 >More info 0.50 >More info WT aerial part Original data GEO bulk
192 pmr5 0.35 >More info 0.60 >More info Col-0 Original data GEO bulk
193 dorn1-1 Root 100 mM ATP 30 min -0.41 >More info -0.54 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
194 PAHs stress 0.54 >More info 0.40 >More info exp control phenanthrene whole plants Original data GEO bulk
195 atmospheric CO2 low Mg shoot 0.55 >More info 0.39 >More info atmospheric CO2 normal Mg shoot Shoot Original data
196 ex1ex2flu dark 8hours/30 minute light -0.64 >More info -0.30 >More info col dark 8hours/30 minute light Original data GEO bulk
197 abh1 -ABA 0.50 >More info 0.44 >More info Col-0 -ABA Original data GEO bulk
198 35S:RPS4 eds1-2 2h -0.41 >More info -0.53 >More info 35S:RPS4 2h leaves Original data
199 npr1 sni1 SA 0.53 >More info 0.40 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
200 WT +Pep2 10h 0.67 >More info 0.26 >More info WT untreated Pep2 Original data GEO bulk
201 overexpresser LBD37 in -N -0.60 >More info -0.33 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
202 Cor 10h 0.50 >More info 0.43 >More info Mock 10h Cor Original data GEO bulk
203 GST NPP1 4 h (leaf) 0.41 >More info 0.52 >More info Mock 4 h (leaf) Original data Elicitor treatments
204 pho1 0.60 >More info 0.32 >More info Col2WT Original data GEO bulk
205 pad4-PsmES4326-24hpi -0.51 >More info -0.41 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
206 Elevated CO2 expanding leaf 0.61 >More info 0.31 >More info Ambient CO2 expanding leaf expanding leaf Original data
207 IAA7mII over-expressor IAA Treated 0.23 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
208 Time-0 chr11-1chr17-1 -0.53 >More info -0.38 >More info Time-0 Col-0 leaf explants Original data
209 tbf1-mock infiltration -0.60 >More info -0.31 >More info WT-mock infiltration water for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
210 eds16 whole leaf 7dpi -0.41 >More info -0.50 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
211 Shoot -Cs 0.52 >More info 0.38 >More info Control-shoot Original data GEO bulk
212 Root GLU1-KO -0.52 >More info -0.38 >More info Root Col(0) roots Original data GEO bulk
213 Nicotinamide-61hr 0.36 >More info 0.54 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
214 PsJN 0.36 >More info 0.54 >More info Control inoculated with the PGPR bacterial model Burkholderia phytofirmans PsJN Plantlet Original data GEO bulk
215 Mutant clv3-7(flower) -0.60 >More info -0.30 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
216 Mutant ufo-1(flower) 0.54 >More info 0.35 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
217 GST 4 h (leaf) 0.26 >More info 0.63 >More info Mock 4 h (leaf) Original data Elicitor treatments
218 ape2 low light 0.37 >More info 0.52 >More info Ws-2 low light Original data GEO bulk
219 Col-0 V. longisporum-inoculated 48 hpi 0.35 >More info 0.54 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
220 AtLysM RLK1 mutant water 0.57 >More info 0.32 >More info WT water Original data GEO bulk
221 OE-HRA1 2HS  0.68 >More info 0.20 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
222 shoots bhlh100/101 0uM Fe 0.54 >More info 0.34 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
223 WT chitooctaose 0.62 >More info 0.26 >More info WT water Original data GEO bulk
224 sex1-3 0.37 >More info 0.51 >More info Col-WT leaves Original data GEO bulk
225 Nicotinamide-81hr 0.35 >More info 0.53 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
226 ABA SA 24h 0.29 >More info 0.59 >More info EtOH 24h 24hr Original data GEO bulk
227 CHS-silenced type -0.56 >More info -0.31 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
228 coi1-16 ein2 sid2 ctrl -0.54 >More info -0.33 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
229 aphid saliva treated 0.23 >More info 0.64 >More info control aphid saliva treated leaves Original data GEO bulk
230 Myzus persicae saliva 0.23 >More info 0.64 >More info Control Original data GEO bulk
231 PstDC3000 48h 0.35 >More info 0.52 >More info WT untreated 48hr leaf Original data GEO bulk
232 ataf1-1 mutant Col-0 Un-inoculated -0.54 >More info -0.32 >More info WT Col-0 Un-inoculated Original data GEO bulk
233 short 17-degree- -0.06 >More info -0.80 >More info control short Original data GEO bulk
234 Atwrky63 -0.59 >More info -0.27 >More info Col0 none leaf Original data GEO bulk
235 Root dark control 24h 0.29 >More info 0.57 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
236 WT (Col) glucose -0.29 >More info -0.57 >More info WT (Col) glucose seedlings Original data GEO bulk
237 FOX line K16331 0.51 >More info 0.34 >More info empty vector control (T3) FOX lines Original data GEO bulk
238 cat2-long-day 2d -0.66 >More info -0.19 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
239 S14-150 0.50 >More info 0.35 >More info wt Original data GEO bulk
240 penta Alternaria 3dpi 0.58 >More info 0.27 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
241 Col upon hypoxia 6 hrs 0.51 >More info 0.33 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
242 C24-1h IAA 0.52 >More info 0.32 >More info C24-0h IAA whole plant Original data GEO bulk
243 3x(m) 0.51 >More info 0.33 >More info 2x two week old seedlings Original data
244 Nicotinamide-65hr 0.30 >More info 0.54 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
245 CeO2 germinant -0.32 >More info -0.52 >More info Millipore Water germinant CeO2 seedling Original data
246 pip3 At2g19270 TDNA 9 0.22 >More info 0.62 >More info Col-0 whole plant Original data GEO bulk
247 GA 0.52 >More info 0.31 >More info none GA Rosette Original data GEO bulk
248 C24 UV1 -0.63 >More info -0.20 >More info C24 mock UV seedling Original data
249 Col whole leaf amplified 5 dpi 0.30 >More info 0.53 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
250 siliques AtHb1 control 0.31 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
251 Compost 0.58 >More info 0.25 >More info Perlite Compost Original data GEO bulk
252 WT flg22 1h 0.51 >More info 0.31 >More info WT 0h Leaf tissue Original data GEO bulk
253 coi1-16 ein2 sid2 ozone 0.51 >More info 0.31 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
254 1 h Light Total RNA -0.26 >More info -0.56 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
255 sfr6 drought -0.26 >More info -0.56 >More info WT drought All aerial tissue Original data GEO bulk
256 DC3000 24h 0.61 >More info 0.21 >More info Mock 24h DC3000 Original data GEO bulk
257 WT roots - Fe 0.64 >More info 0.17 >More info WT roots + Fe Roots Original data GEO bulk
258 atgsnor1-3-avrB-6h -0.51 >More info -0.30 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
259 Nicotinamide-73hr 0.27 >More info 0.54 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
260 cdpk6-yfp 0.67 >More info 0.13 >More info Kan seedlings Original data GEO bulk
261 miR 0h 0.54 >More info 0.26 >More info Col 0h Leaf Original data GEO bulk
262 Bur-0-1h IAA 0.64 >More info 0.16 >More info Bur-0h IAA whole plant Original data GEO bulk
263 1h light (+Lincomycin) 0.50 >More info 0.29 >More info 1h light (-Lincomycin) seedlings Original data GEO bulk
264 calcicole ecotype Cal-0 0.65 >More info 0.13 >More info Col-4 1 mM CaCl2 Original data GEO bulk
265 stn7-1 -0.51 >More info -0.27 >More info Col-0 rosette leaves Original data GEO bulk
266 sav1-1 light 0.51 >More info 0.26 >More info Col-0 light seedlings Original data GEO bulk
267 SA 4mM 0.50 >More info 0.27 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
268 shoot control pRBCS 0.51 >More info 0.25 >More info shoot control total Original data GEO bulk
269 sdg2 0.54 >More info 0.22 >More info wt seedling Original data GEO bulk
270 phyB mutant 16C 4hrs 0.25 >More info 0.51 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
271 Nicotinamide-69hr 0.22 >More info 0.54 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
272 2xX6x interploidy cross 0.23 >More info 0.53 >More info 2xX2x cross Original data GEO bulk
273 WT AntimycinA 3h 0.24 >More info 0.52 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
274 4d red light grown hmr-5 seedlings 0.24 >More info 0.52 >More info 4d red light grown WT(Col-0) seedlings Original data
275 SLWF infested 0.56 >More info 0.19 >More info SLWF uninfested rosette tissue Original data GEO bulk
276 Leafminer damaged seedlings 0.19 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
277 cov1 cov2 stem Base 0.52 >More info 0.22 >More info WT stem Base stem Base Original data GEO bulk
278 penta Pst DC3000 12hpi 0.53 >More info 0.21 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
279 auxin and brassinazole seedlings 0.56 >More info 0.18 >More info auxin seedlings Original data GEO bulk
280 WT leaves - Fe 0.51 >More info 0.23 >More info WT leaves + Fe Leaves Original data GEO bulk
281 SA Treated 0.66 >More info 0.08 >More info Water Original data GEO bulk
282 ACC 3 h 0.20 >More info 0.54 >More info Mock 3 h Original data Basic hormone treatment of seedlings
283 root - 08% oxygen - 48h -0.22 >More info -0.52 >More info root - 21% oxygen - 48h Original data GEO bulk
284 Total RNA 35S:HF-RPL18 cold 0.53 >More info 0.20 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
285 AAF-OX 0.51 >More info 0.22 >More info Col-0 Rosette leaf Original data GEO bulk
286 Root dark control 7h 0.20 >More info 0.53 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
287 Whole root - low pH 1H 0.20 >More info 0.53 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
288 IRP1-OE-Ctrl--shoot 0.58 >More info 0.14 >More info COL-0-Ctrl--shoot shoot Original data
289 35S::HRE1 Aerobic -0.53 >More info -0.18 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
290 Cs shoot -0.06 >More info -0.65 >More info control shoot Original data GEO bulk
291 Homozygous-AtcesA6 -0.54 >More info -0.16 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
292 Heat shock optimum 0.05 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
293 Root submergence 24h 0.19 >More info 0.51 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
294 46T-CK 0.07 >More info 0.63 >More info WT-CK none Original data
295 mutant acs4A (single mutant) -0.55 >More info -0.12 >More info col control (single mutant) Original data GEO bulk
296 SHR-GR Time 6H Dex -0.11 >More info -0.56 >More info SHR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
297 del1-1 5dpi 0.54 >More info 0.12 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
298 PNO8 12 h 0.15 >More info 0.51 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
299 toc1-1-93hr 0.12 >More info 0.54 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
300 dcl1-7 0.54 >More info 0.11 >More info Ler Original data GEO bulk
301 short 12-degree- -0.14 >More info -0.51 >More info control short Original data GEO bulk
302 xyl-grown cell culture- 1h 1mM Fru -0.10 >More info -0.55 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
303 TaFLS overexpression line (OE2) -0.63 >More info 0.00 >More info Col-0 Rosette leaves Original data
304 aln-1 -0.55 >More info -0.08 >More info Col-0 Aerial part of seedlings Original data
305 elf3-7-23ºC -0.03 >More info -0.58 >More info WT-23ºC Original data GEO bulk
306 seedlings by volatiles from leafminer damaged
Lima bean 24h		 -0.53 >More info -0.07 >More info seedlings by volatiles from healthy Lima bean 24h leaves Original data GEO bulk
307 root callus inducing medium 48 h -0.50 >More info -0.09 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
308 short 8-degree- -0.09 >More info -0.50 >More info control short Original data GEO bulk
309 TaFLS overexpression line (OE1) -0.56 >More info -0.02 >More info Col-0 Rosette leaves Original data
310 Ambient CO2 LIMITING N DAY 0.51 >More info 0.07 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
311 Dark 6h wt -0.57 >More info -0.01 >More info 0h wt Original data
312 vte2 leaves 120h LT 0.53 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
313 Full AC2 T2 0.57 >More info -0.02 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
314 T6 leaf-drought -0.50 >More info -0.04 >More info T6 leaf-well watered Original data GEO bulk
315 cat2-short-day 4d -0.50 >More info -0.03 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
316 leaf blade in D 0.02 >More info 0.51 >More info leaf blade in WL leaf blades Original data GEO bulk
317 Dark 6h hml -0.56 >More info 0.05 >More info 0h hml Original data
318 tga2 tga5 tga6 ctrl -0.50 >More info 0.01 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) control Original data
319 Light 3day hml -0.50 >More info 0.01 >More info 0h hml Original data
320 low CO2 + dark -0.02 >More info 0.51 >More info normal CO2 + light Original data GEO bulk
321 Shoot apex inflorescence (after bolting) -0.20 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
322 6h volatiles Sm. R3089 -0.10 >More info 0.54 >More info 6h untreated whole seedling Original data GEO bulk
323 Col PSTDC3000 24h 0.55 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
324 0h hml 0.54 >More info -0.12 >More info 0h wt Original data
325 Cs root 0.61 >More info -0.19 >More info control root Original data GEO bulk
326 CCA1-ox 6am non-polysomal -0.12 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
327 bZIP1ko mutant N-Light- -0.55 >More info 0.19 >More info WT-sib N-Light- whole plant Original data GEO bulk
328 cat2-2; 8h switch to ambient CO2 concentrations; 0.51 >More info -0.16 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
329 seed germinating in countinuous light 24h SL -0.35 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
330 P-chlorophenoxy- isobutyric acid 3 h 0.50 >More info -0.22 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
331 Mh0 UV -0.61 >More info 0.35 >More info Mh0 mock UV seedling Original data
332 rdr6-15 0.51 >More info -0.26 >More info Col-0 plant inflorescence Original data
333 tt4 -0.55 >More info 0.33 >More info WT aerial region Original data GEO bulk
334 seedling -S Exp -0.49 >More info 0.64 >More info seedling FN Exp seedling Original data
335 GO5; harvested 8h continiously maintained in high
CO2;		 -0.51 >More info 0.42 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data