4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on SHR-GR Time 6H Dex
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "SHR-GR Time 6H Dex"  Help Download transcriptome of top 30
Score Experiment Correlation from
SHR-GR Time 6H Dex		 Correlation to
SHR-GR Time 6H Dex		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 SHR-GR Time 6H Dex 1.00 >More info 1.00 >More info SHR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
2 SHR-GR Time 12H Dex 0.90 >More info 0.84 >More info SHR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
3 SHR-GR Time 3H Dex 0.84 >More info 0.85 >More info SHR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
4 root epidermis and lateral root cap -S 0.71 >More info 0.55 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
5 Heat shock optimum 0.60 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
6 ABA JA 24h -0.48 >More info -0.63 >More info EtOH 24h 24hr Original data GEO bulk
7 root longitudinal zone-1 low sulfur 0.56 >More info 0.45 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
8 ABA SA 24h -0.37 >More info -0.64 >More info EtOH 24h 24hr Original data GEO bulk
9 tfl1-1-16ºC -0.51 >More info -0.42 >More info WT-16ºC Original data GEO bulk
10 root cells endodermis 140mM NaCl 48 hours 0.62 >More info 0.30 >More info root cells endodermis standard 1 hour root cells endodermis Original data
11 MG132 3 h 0.30 >More info 0.59 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
12 WT (Col) glucose 0.52 >More info 0.36 >More info WT (Col) glucose seedlings Original data GEO bulk
13 detached inflorescences 24h -0.57 >More info -0.31 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
14 Mutant lwd1_lwd2 0.53 >More info 0.34 >More info Wildtype for phy mutants Original data GEO bulk
15 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.53 >More info 0.34 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
16 ISOXABEN 0.59 >More info 0.28 >More info CON 0.1 mM ISOXABEN Original data GEO bulk
17 eto1-4 -0.66 >More info -0.21 >More info Col-0 whole seedling Original data GEO bulk
18 ein2 mutant roots IAA 0.65 >More info 0.21 >More info roots ethylene Original data GEO bulk
19 root cells endodermis 140mM NaCl 20 hours 0.54 >More info 0.31 >More info root cells endodermis standard 1 hour root cells endodermis Original data
20 root stele -S 0.54 >More info 0.31 >More info root stele pH5.7 Original data GEO bulk
21 msg2-BR 0.57 >More info 0.28 >More info BR BR dark-grown seedlings Original data GEO bulk
22 sim smr1 0.58 >More info 0.26 >More info WT seedling Original data GEO bulk
23 IAA7mII over-expressor IAA Treated 0.15 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
24 root stele 40 mM NaCls -0.50 >More info -0.32 >More info root stele Original data GEO bulk
25 M6PR transgenic leaf 100mM NaCl -0.58 >More info -0.24 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
26 35S:CDO1 normoxia -0.64 >More info -0.16 >More info WT normoxia normoxia whole rosette Original data
27 IPT8 induced 24h -0.73 >More info -0.07 >More info Control 24h 24 hours primary root tip (5 mm) Original data GEO bulk
28 short 17-degree- 0.28 >More info 0.52 >More info control short Original data GEO bulk
29 SCR-GR Time 6H Dex 0.25 >More info 0.55 >More info SCR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
30 arr-dmso-sample 0.59 >More info 0.21 >More info Wt-dmso-sample seedling Original data
31 L2.5 mutant -0.51 >More info -0.28 >More info Wt Original data GEO bulk
32 ahg1-1 -0.60 >More info -0.19 >More info ABA control Original data GEO bulk
33 stele pSHR 0h BL 0.52 >More info 0.27 >More info WR 35S 0h BL brassinosteroid root Original data
34 gun4-1 -0.59 >More info -0.18 >More info WT Col-0 seedling Original data GEO bulk
35 root cells endodermis 140mM NaCl 32 hours 0.50 >More info 0.27 >More info root cells endodermis standard 1 hour root cells endodermis Original data
36 Col-7 Sucrose 0.57 >More info 0.19 >More info col-7 Original data GEO bulk
37 cpr5 sim smr1 0.56 >More info 0.20 >More info WT seedling Original data GEO bulk
38 dorn1-1 Root MES buffer 30 min 0.56 >More info 0.20 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
39 Shoot apex inflorescence (after bolting) 0.11 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
40 P-chlorophenoxy- isobutyric acid 3 h 0.17 >More info 0.58 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
41 mkk1 control rep 0.57 >More info 0.17 >More info Col-0 Time 0 rep Original data GEO bulk
42 myb3 myb3r4d -0.20 >More info -0.54 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
43 IXB induced -0.56 >More info -0.17 >More info Methanol IXB Suspension cells Original data GEO bulk
44 Col-0 overexpressing At1g54160 control 0.60 >More info 0.13 >More info WT no treatement Original data GEO bulk
45 At1g54160 ox 0.60 >More info 0.13 >More info Col-0 Original data GEO bulk
46 Mutant arf2-6 (IAA) 0.54 >More info 0.18 >More info Col (IAA) Original data GEO bulk
47 Col-0 flu HL 0h -0.53 >More info -0.19 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
48 Shoot submergence 24h -0.52 >More info -0.19 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
49 Nicotinamide-89hr -0.63 >More info -0.07 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
50 Nicotinamide-65hr -0.62 >More info -0.06 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
51 Octopus overexpressor 35SDYG25 -0.56 >More info -0.11 >More info WS Original data GEO bulk
52 Salt Stress 24 h (root) -0.51 >More info -0.16 >More info Stress mock 24 h (root) Original data Stress treatments
53 SCR-GR Time 1H Dex -0.12 >More info -0.55 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
54 dorn1-1 Root 100 mM ATP 30 min 0.57 >More info 0.10 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
55 Laer pretreat GA Flg22 1h -0.04 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
56 root cap pGL2 0h BL -0.55 >More info -0.11 >More info WR 35S 0h BL brassinosteroid root Original data
57 17 0h total 0.53 >More info 0.13 >More info 27 0h total whole seedlings floating on MS medium Original data
58 Nicotinamide-69hr -0.58 >More info -0.06 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
59 Col-0 C2H4 24h -0.50 >More info -0.13 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
60 Laer MeJA 1h 0.68 >More info -0.06 >More info Laer Control leaf discs Original data GEO bulk
61 bak1-3 +Pep2 10h -0.52 >More info -0.09 >More info WT +Pep2 10h Pep2 Original data GEO bulk
62 ein2-1 +elf18 10h 0.51 >More info 0.09 >More info WT +elf18 10h elf18 Original data GEO bulk
63 short 12-degree- 0.07 >More info 0.52 >More info control short Original data GEO bulk
64 general seed coat linear-cotyledon -0.52 >More info -0.06 >More info whole seeds linear-cotyledon Original data GEO bulk
65 phr1 Root-Pi -0.51 >More info -0.07 >More info WT Root+Pi roots Original data GEO bulk
66 seed germinating in countinuous light 24h SL -0.09 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
67 ABA 3h 0.63 >More info -0.05 >More info EtOH 3h 3hr Original data GEO bulk
68 chl1-5 10mM NH4NO3 -0.57 >More info -0.01 >More info col 10mM NH4NO3 Root Original data
69 Col-0 6h NAA 0.60 >More info -0.02 >More info Col-0 6h MOCK Original data GEO bulk
70 overexpresser LBD38 in -N 0.51 >More info 0.06 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
71 35S::RSL4 -0.50 >More info -0.07 >More info Col-0 Control root Original data GEO bulk
72 IPT8 induced 12h -0.50 >More info -0.07 >More info Control 12h 12 hours primary root tip (5 mm) Original data GEO bulk
73 NAA 3h 0.51 >More info 0.05 >More info before treatment NAA root Original data GEO bulk
74 P35S:rGRF1 0.55 >More info 0.01 >More info Col-0 Original data GEO bulk
75 4d red light grown hmr-5 seedlings -0.53 >More info -0.03 >More info 4d red light grown WT(Col-0) seedlings Original data
76 shoot control pSUC2 -0.53 >More info -0.03 >More info shoot control total Original data GEO bulk
77 swn-7 -0.04 >More info -0.52 >More info Col whole plant Original data GEO bulk
78 Leafminer damaged seedlings -0.00 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
79 roots bhlh100/101 0uM Fe -0.50 >More info -0.05 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
80 gai Flg22 1h -0.53 >More info -0.02 >More info Laer Flg22 1h leaf discs Original data GEO bulk
81 Col BTH -0.12 >More info 0.67 >More info Col rosettes Original data GEO bulk
82 20d after anthesis -0.53 >More info -0.01 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
83 tfl1-1-23ºC -0.55 >More info 0.01 >More info WT-23ºC Original data GEO bulk
84 UV Stress 24 h (root) -0.56 >More info 0.02 >More info Stress mock 24 h (root) Original data Stress treatments
85 cngc4 -0.54 >More info -0.00 >More info Ws-2 Seedlings Original data GEO bulk
86 ptpks2 -0.15 >More info 0.68 >More info Col-WT leaves Original data GEO bulk
87 bri1-116 -0.20 >More info 0.73 >More info Col seedling Original data GEO bulk
88 Nicotinamide-61hr -0.61 >More info 0.09 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
89 root control pSUC2 -0.55 >More info 0.03 >More info root control total control root Original data GEO bulk
90 slr-1 6h NAA -0.59 >More info 0.07 >More info Col-0 6h NAA Original data GEO bulk
91 ALC Toc1 light-light EtOH -0.57 >More info 0.05 >More info Col light-light EtOH 2.5% ethanol Original data GEO bulk
92 Nicotinamide-85hr -0.57 >More info 0.06 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
93 NAA 6h 0.56 >More info -0.05 >More info before treatment NAA root Original data GEO bulk
94 shoot hypoxia pSUC2 -0.51 >More info -0.00 >More info shoot hypoxia total Original data GEO bulk
95 root longitudinal zone-2 low sulfur 0.51 >More info -0.01 >More info root longitudinal zone-2 pH 5.7 Original data GEO bulk
96 A. halleri 0.52 >More info -0.02 >More info A. thaliana mature leaves before flowering Original data GEO bulk
97 IPT8 mutant tZ 24h -0.56 >More info 0.06 >More info Control 24h 24 hours primary root tip (5 mm) Original data GEO bulk
98 4C 0h -0.51 >More info 0.04 >More info 22C 0h Original data GEO bulk
99 Stem+10 mg/g NPA 0.52 >More info -0.05 >More info Stem (mock control) NPA treated stem stem Original data GEO bulk
100 Col-0 under 4 days salt -0.50 >More info 0.03 >More info Col-0 under control 4 days salt treatment rosette Original data
101 IPT8 mutant tZ 12h -0.53 >More info 0.07 >More info Control 12h 12 hours primary root tip (5 mm) Original data GEO bulk
102 siliques AtHb1 control -0.07 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
103 6h volatiles Sp. HRO-C48 -0.59 >More info 0.15 >More info 6h untreated whole seedling Original data GEO bulk
104 Root -K -0.51 >More info 0.09 >More info Control-root Original data GEO bulk
105 Nicotinamide-57hr -0.61 >More info 0.19 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
106 Col-0 V. longisporum-inoculated 48 hpi -0.08 >More info 0.50 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
107 K starvation (root) -0.51 >More info 0.10 >More info Ws (root) Original data GEO bulk
108 Nicotinamide-81hr -0.58 >More info 0.17 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
109 8-DAC chr11-1chr17-1 -0.50 >More info 0.13 >More info 8-DAC Col-0 leaf explants Original data
110 root cap pGL2(root cap pGL2BRI1) 3h BL -0.65 >More info 0.29 >More info root cap pGL2(root cap pGL2BRI1) 0h BL brassinosteroid root Original data
111 phyB Rc50 -0.54 >More info 0.20 >More info WT(Ler) Rc50 Original data GEO bulk
112 Col-0 RNAi-MBS2/mbs1-1 HL 0h -0.51 >More info 0.17 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
113 Col0-PsmES4326-24hpi -0.28 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
114 Split KNO3 roots - 8hours 0.53 >More info -0.21 >More info Split KCl roots - 8hours 5mM KNO3 on ONE side for 8 hours roots Original data GEO bulk
115 TaFLS overexpression line (OE2) 0.51 >More info -0.19 >More info Col-0 Rosette leaves Original data
116 root control pPEP -0.58 >More info 0.26 >More info root control total control root Original data GEO bulk
117 atmyc2 cop1 Seedling BL -0.51 >More info 0.20 >More info WT Seedling BL Original data GEO bulk
118 ckh1 CK200 -0.60 >More info 0.30 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
119 CCA1-ox 6am non-polysomal -0.23 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
120 EBE-XVE +estradiol -0.54 >More info 0.27 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
121 root longitudinal zone-4 low sulfur 0.52 >More info -0.29 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk