4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on phr1 Root-Pi
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List of experiments correlated with "phr1 Root-Pi"  Help Download transcriptome of top 30
Score Experiment Correlation from
phr1 Root-Pi		 Correlation to
phr1 Root-Pi		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 phr1 Root-Pi 1.00 >More info 1.00 >More info WT Root+Pi roots Original data GEO bulk
2 WT Root-Pi 0.82 >More info 0.85 >More info WT Root+Pi roots Original data GEO bulk
3 WT no Pi 0.74 >More info 0.68 >More info WT complete seedlings Original data
4 WT Shoot-Pi 0.66 >More info 0.69 >More info WT Shoot+Pi shoots Original data GEO bulk
5 WT 1mM phosphate 8 hours. -0.62 >More info -0.68 >More info WT control (not supplemented). Original data
6 WT 30μM phosphate 8 hours. -0.58 >More info -0.72 >More info WT control (not supplemented). Original data
7 WT 1wk -P 0.55 >More info 0.72 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
8 UV Stress 24 h (root) 0.56 >More info 0.66 >More info Stress mock 24 h (root) Original data Stress treatments
9 seedlings-week-old RECA1-overexpressing
transgenic		 0.62 >More info 0.60 >More info seedlings-week-old Col-0 seedlings Original data
10 pho1 0.53 >More info 0.67 >More info Col2WT Original data GEO bulk
11 WT resupplied Pi 4h 0.60 >More info 0.60 >More info WT complete seedlings Original data
12 root - 04% oxygen - 2h -0.45 >More info -0.73 >More info root - 21% oxygen - 2h Original data GEO bulk
13 root - 04% oxygen - 48h -0.37 >More info -0.80 >More info root - 21% oxygen - 48h Original data GEO bulk
14 oligomycin 4 h 0.60 >More info 0.55 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
15 oligomycin 1 h 0.53 >More info 0.62 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
16 WT AntimycinA 3h 0.58 >More info 0.57 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
17 WT drought 0.48 >More info 0.66 >More info WT control All aerial tissue Original data GEO bulk
18 Salt Stress 24 h (root) 0.59 >More info 0.54 >More info Stress mock 24 h (root) Original data Stress treatments
19 myb3 myb3r4d 0.45 >More info 0.67 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
20 hog1-7 -0.60 >More info -0.51 >More info wt whole seedling Original data GEO bulk
21 mutant-line774 -0.60 >More info -0.51 >More info WT-control whole plant Original data GEO bulk
22 WT+chitooctaose 0.43 >More info 0.67 >More info WT+water chitooctaose seedlings Original data GEO bulk
23 mutant-line1135 -0.61 >More info -0.48 >More info WT-control whole plant Original data GEO bulk
24 ddm1-12 -0.61 >More info -0.48 >More info wt whole seedling Original data GEO bulk
25 HARAP aerobic -0.39 >More info -0.69 >More info WT aerobic aerobic Original data GEO bulk
26 Col-0 9 hpi A. brassicicola 0.43 >More info 0.64 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
27 3x(m) 0.31 >More info 0.76 >More info 2x two week old seedlings Original data
28 root - 08% oxygen - 48h -0.38 >More info -0.69 >More info root - 21% oxygen - 48h Original data GEO bulk
29 coi1-2 0.44 >More info 0.62 >More info Col-0 mock Whole seedling Original data GEO bulk
30 low CO2 + light 0.41 >More info 0.65 >More info normal CO2 + light Original data GEO bulk
31 ein2-1 9 hpi A. brassicicola 0.46 >More info 0.60 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
32 FLIGHT TAGESB plate6 ROOTS 0.40 >More info 0.66 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
33 CMP 4hr 0.52 >More info 0.52 >More info Acetone 4hr root Original data GEO bulk
34 bHLH122 ox -0.29 >More info -0.75 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
35 Col0-PsmES4326-24hpi 0.42 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
36 chito-octamer 0.45 >More info 0.57 >More info Col Mock Original data GEO bulk
37 Fenclorim 4hr 0.47 >More info 0.55 >More info Acetone 4hr root Original data GEO bulk
38 WT 3H Cold 0.36 >More info 0.66 >More info WT control Original data GEO bulk
39 D2O 0.57 >More info 0.44 >More info H2O seedling Original data GEO bulk
40 Cold Stress 24 h (root) 0.48 >More info 0.52 >More info Stress mock 24 h (root) Original data Stress treatments
41 iron minus 24h -0.29 >More info -0.71 >More info iron +24h root Original data GEO bulk
42 Col-Luc WT 3h antimycin A 0.48 >More info 0.52 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
43 spx1 spx2 complete 0.51 >More info 0.48 >More info WT complete seedlings Original data
44 SCR-GR Time 1H Dex 0.28 >More info 0.71 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
45 Fenclorim 24hr 0.42 >More info 0.57 >More info Acetone 24hr root Original data GEO bulk
46 Root -Cs 0.48 >More info 0.51 >More info Control-root Original data GEO bulk
47 Cycloheximide 3 h 0.51 >More info 0.47 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
48 GST NPP1 4 h (leaf) 0.44 >More info 0.54 >More info Mock 4 h (leaf) Original data Elicitor treatments
49 bak1-3 +Pep2 10h 0.44 >More info 0.54 >More info WT +Pep2 10h Pep2 Original data GEO bulk
50 4C 1h 0.29 >More info 0.69 >More info 4C 0h Original data GEO bulk
51 root - 04% oxygen - 30min -0.36 >More info -0.61 >More info root - 21% oxygen - 30min Original data GEO bulk
52 Split KNO3 roots - 2days -0.37 >More info -0.60 >More info Split KCl roots - 2days 5mM KNO3 on ONE side for 2 days roots Original data GEO bulk
53 Shoot -P 0.26 >More info 0.71 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
54 dde2-2 9 hpi A. brassicicola 0.41 >More info 0.56 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
55 col-5 hrpA 12h 0.40 >More info 0.56 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
56 root Dosed gold 0.54 >More info 0.42 >More info root No gold .125 mM gold 24 h roots Original data
57 0.125 mM gold 24 h 0.54 >More info 0.42 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
58 Phaseolicola 2 h (leaf) 0.36 >More info 0.59 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
59 Laer pretreat GA Flg22 1h 0.24 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
60 1h +Pi -0.35 >More info -0.60 >More info 1h -Pi root Original data GEO bulk
61 WT 2-4h Xanthomonas 0.41 >More info 0.54 >More info WT T0 Original data GEO bulk
62 SA 4mM 0.50 >More info 0.44 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
63 Osmotic Stress 24 h (root) 0.50 >More info 0.44 >More info Stress mock 24 h (root) Original data Stress treatments
64 Root P recovery -0.29 >More info -0.65 >More info Root -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
65 pepr1-1 Pepr2-3 +Pep2 2h -0.43 >More info -0.51 >More info WT +Pep2 2h Pep2 Original data GEO bulk
66 AvrRpm1 2 h (leaf) 0.34 >More info 0.59 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
67 OE-HRA1 2HS  0.35 >More info 0.58 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
68 Col in Pi deficiency medium 0.38 >More info 0.54 >More info Col in control medium root Original data GEO bulk
69 ckh1 CK200 0.29 >More info 0.63 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
70 ABA JA 24h 0.20 >More info 0.72 >More info EtOH 24h 24hr Original data GEO bulk
71 xyl-grown cell culture- 1h 1mM Suc 0.23 >More info 0.69 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
72 Leafminer damaged seedlings 0.35 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
73 agb1 gpa1 -ABA LF 0.21 >More info 0.70 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
74 20m.KCl 0.21 >More info 0.69 >More info To. KCl 14 day old Roots Original data GEO bulk
75 Root -P 0.24 >More info 0.65 >More info Root Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
76 root epidermis and lateral root cap -S -0.29 >More info -0.60 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
77 root - 08% oxygen - 2h -0.21 >More info -0.67 >More info root - 21% oxygen - 2h Original data GEO bulk
78 shoot hypoxia p35S 0.24 >More info 0.64 >More info shoot hypoxia total Original data GEO bulk
79 rosette leaves fdh 0.37 >More info 0.51 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
80 GO5; 8h switch to ambient CO2 concentrations; 0.35 >More info 0.53 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
81 35S:RPS4 eds1-2 2h -0.29 >More info -0.59 >More info 35S:RPS4 2h leaves Original data
82 GST 4 h (leaf) 0.31 >More info 0.56 >More info Mock 4 h (leaf) Original data Elicitor treatments
83 shoot control p35S 0.28 >More info 0.59 >More info shoot control total Original data GEO bulk
84 Col ozone 3h 0.24 >More info 0.63 >More info Col clean-air 3h ozone Original data GEO bulk
85 Dex-rga(delta17) 4h GA4 -0.36 >More info -0.51 >More info Vector 4h GA4 shoots Original data GEO bulk
86 root - 01% oxygen - 30min -0.30 >More info -0.57 >More info root - 21% oxygen - 30min Original data GEO bulk
87 CLO 4mM 0.52 >More info 0.34 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
88 35S::PI ap3-3 35S::AP-GR +DEX 0.33 >More info 0.53 >More info 0hr DEX Original data GEO bulk
89 seedlings protease IV 0.36 >More info 0.50 >More info seedlings nontreated control whole seedling Original data
90 Kas-1 -Fe 24h -0.30 >More info -0.55 >More info Kas-1 +Fe 24h roots Original data GEO bulk
91 Kas -Fe 24h Roots -0.30 >More info -0.55 >More info Kas +Fe 24h Roots Original data GEO bulk
92 WT-Dry 0.29 >More info 0.56 >More info WT-CK dehydration treatment 1h Original data
93 Col-0 35S:MBS1 HL 3h -0.30 >More info -0.55 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
94 root - 08% oxygen - 30min -0.23 >More info -0.62 >More info root - 21% oxygen - 30min Original data GEO bulk
95 cys-c1 root -0.28 >More info -0.57 >More info Root-WT roots Original data GEO bulk
96 Col-0 +ABA LF 0.28 >More info 0.57 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
97 Mutant arf2 (etiol) 0.34 >More info 0.50 >More info Col (etiol) Original data GEO bulk
98 arf2 mock 0.34 >More info 0.50 >More info Col mock Original data GEO bulk
99 myb61 xylem 0.06 >More info 0.78 >More info wt xylem xylem Original data GEO bulk
100 4C 2h(SOIL) 0.25 >More info 0.59 >More info 4C 0h(SOIL) Original data GEO bulk
101 K starvation (shoot) 0.29 >More info 0.54 >More info Ws (shoot) Original data GEO bulk
102 SAM SE agl15 agl18 double mutant 0.20 >More info 0.63 >More info SAM SE Col Original data GEO bulk
103 WT 3h -P 0.27 >More info 0.56 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
104 Shoot -K 0.29 >More info 0.54 >More info Control-shoot Original data GEO bulk
105 mdh 0.27 >More info 0.54 >More info Col Original data GEO bulk
106 root longitudinal zone-1 low sulfur -0.28 >More info -0.52 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
107 6h +Pi -0.52 >More info -0.27 >More info 6h -Pi root Original data GEO bulk
108 gpa1 -ABA GC -0.22 >More info -0.57 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
109 DUO1 induced 6h -0.28 >More info -0.50 >More info 6hr-not-induced whole plant Original data GEO bulk
110 gpa1 -ABA LF 0.27 >More info 0.51 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
111 Leaf wounded 0.15 >More info 0.63 >More info Leaf control vegetative leaf Original data GEO bulk
112 Col BTH 0.11 >More info 0.67 >More info Col rosettes Original data GEO bulk
113 root longitudinal zone-3 -Fe -0.14 >More info -0.63 >More info root longitudinal zone-3 standard Original data GEO bulk
114 arp6-10 12 ºC -0.10 >More info -0.67 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
115 21h-DC3000 hrpA -0.13 >More info -0.64 >More info 21h-DC3000 leaves Original data GEO bulk
116 WT 6H Cold 0.27 >More info 0.50 >More info WT control Original data GEO bulk
117 IAA7mII over-expressor IAA Treated 0.07 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
118 oas-a1.1 Cd 18h 0.19 >More info 0.57 >More info Cd 18h root Root Original data GEO bulk
119 S15-118 0.25 >More info 0.51 >More info wt Original data GEO bulk
120 SHR-GR Time 12H Dex -0.20 >More info -0.55 >More info SHR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
121 root stele -S -0.19 >More info -0.56 >More info root stele pH5.7 Original data GEO bulk
122 bak1-3 +Pep2 2h 0.21 >More info 0.54 >More info WT +Pep2 2h Pep2 Original data GEO bulk
123 Shoot -Cs 0.20 >More info 0.55 >More info Control-shoot Original data GEO bulk
124 miR393 0h -0.21 >More info -0.53 >More info WT 0h Leaf tissue Original data GEO bulk
125 pepr1-1 Pepr2-3 untreated -0.21 >More info -0.53 >More info WT untreated untreated Original data GEO bulk
126 embryo proper linear-cotyledon -0.22 >More info -0.51 >More info whole seeds linear-cotyledon Original data GEO bulk
127 agb1 -ABA LF 0.17 >More info 0.55 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
128 24h +Pi -0.51 >More info -0.20 >More info 24h -Pi root Original data GEO bulk
129 ABA 1 h 0.18 >More info 0.53 >More info Mock 1 h Original data Basic hormone treatment of seedlings
130 Split KNO3 roots - 2hours -0.15 >More info -0.54 >More info Split KCl roots - 2hours 5mM KNO3 on ONE side for 2 hours roots Original data GEO bulk
131 Red/FR Light45min -0.19 >More info -0.50 >More info FarRed Light 45min Original data Light treatments
132 Heat shock optimum 0.03 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
133 tetraploid 0.04 >More info 0.64 >More info diploid Original data GEO bulk
134 TA induced 0.18 >More info 0.50 >More info Methanol TA Suspension cells Original data GEO bulk
135 L2.5 mutant 0.15 >More info 0.51 >More info Wt Original data GEO bulk
136 toc1-1-85hr -0.14 >More info -0.51 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
137 12m.KCl 0.11 >More info 0.54 >More info To. KCl 14 day old Roots Original data GEO bulk
138 CDB1-Knockout -0.04 >More info -0.61 >More info WT Original data GEO bulk
139 6h volatiles Sp. HRO-C48 0.13 >More info 0.51 >More info 6h untreated whole seedling Original data GEO bulk
140 phosphate-starved 0.14 >More info 0.50 >More info control shoot tissue Original data GEO bulk
141 FarRed Light 45min 0.13 >More info 0.50 >More info White Light 45min Original data Light treatments
142 IXB induced 0.12 >More info 0.51 >More info Methanol IXB Suspension cells Original data GEO bulk
143 dark +H2O2 -0.08 >More info -0.55 >More info dark 5 mM H2O2 seedling Original data GEO bulk
144 root longitudinal zone-4 -Fe -0.06 >More info -0.56 >More info root longitudinal zone-4 standard Original data GEO bulk
145 siliques AtHb1 control 0.10 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
146 seed germinating in countinuous light 24h SL -0.05 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
147 ABA SA 24h -0.04 >More info 0.65 >More info EtOH 24h 24hr Original data GEO bulk
148 Hypoxic e1 ate -0.08 >More info -0.53 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
149 CCA1-ox 6am non-polysomal 0.10 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
150 vtc1-1 -0.04 >More info -0.56 >More info Col-0 whole plant Original data GEO bulk
151 ABA 0.5 h 0.10 >More info 0.50 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
152 root - 01% oxygen - 48h -0.06 >More info -0.53 >More info root - 21% oxygen - 48h Original data GEO bulk
153 vtc2 mature somatic embryo 0.06 >More info 0.53 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
154 SHR-GR Time 6H Dex -0.07 >More info -0.51 >More info SHR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
155 flu dark 8hours/30 minute light -0.03 >More info 0.61 >More info col dark 8hours/30 minute light Original data GEO bulk
156 Hydrogen Peroxide 500 uM 0.06 >More info 0.51 >More info Control RB and PER Hydrogen Peroxide Original data
157 Aerobic e1 ate2 0.01 >More info -0.58 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
158 Col-0 (t-zeatin 3 h) -0.05 >More info -0.51 >More info Col-0 Original data Cytokinin treatment of seedlings
159 Whole root - low pH 30min 0.04 >More info 0.51 >More info Whole root - Std pH 30min pH 4.6 for 30 min Original data GEO bulk
160 ex2 flu dark 8hours/30 minute light 0.02 >More info 0.52 >More info col dark 8hours/30 minute light Original data GEO bulk
161 erf104-ko Flg22 4h 0.04 >More info 0.50 >More info erf104-ko H2O 4h Original data GEO bulk
162 MPK6 ox Root Hypoxia 0.01 >More info -0.55 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
163 iron minus 6 h -0.02 >More info -0.51 >More info iron +6 h root Original data GEO bulk
164 hira-protoplast -0.02 >More info -0.51 >More info WT-protoplast protoplast Original data
165 bri1-116 -0.21 >More info 0.73 >More info Col seedling Original data GEO bulk
166 estradiole-induced ANAC059 -0.05 >More info 0.57 >More info transgenic (empty vector inducible system) Original data GEO bulk
167 root - 01% oxygen - 2h 0.02 >More info -0.53 >More info root - 21% oxygen - 2h Original data GEO bulk
168 Aerobic prt6 0.05 >More info -0.56 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
169 ABA 24h 0.00 >More info 0.50 >More info EtOH 24h 24hr Original data GEO bulk
170 Chemically 0.07 >More info -0.56 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
171 Shoot apex inflorescence (after bolting) -0.18 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
172 35S:ATR1 like miR 0.18 >More info -0.56 >More info WT for miR Original data GEO bulk
173 WT roots - Fe 0.20 >More info -0.53 >More info WT roots + Fe Roots Original data GEO bulk
174 WT Shoot Hypoxia 0.18 >More info -0.51 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
175 MPK6 ox Shoot Hypoxia 0.24 >More info -0.55 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk