4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on shoot hypoxia p35S
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List of experiments correlated with "shoot hypoxia p35S"  Help Download transcriptome of top 30
Score Experiment Correlation from
shoot hypoxia p35S		 Correlation to
shoot hypoxia p35S		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 shoot hypoxia p35S 1.00 >More info 1.00 >More info shoot hypoxia total Original data GEO bulk
2 shoot control p35S 0.92 >More info 0.93 >More info shoot control total Original data GEO bulk
3 shoot hypoxia pRBCS 0.90 >More info 0.81 >More info shoot hypoxia total Original data GEO bulk
4 shoot hypoxia pGL2 0.93 >More info 0.77 >More info shoot hypoxia total Original data GEO bulk
5 shoot control pRBCS 0.88 >More info 0.67 >More info shoot control total Original data GEO bulk
6 shoot control pSultr2:2 0.88 >More info 0.62 >More info shoot control total Original data GEO bulk
7 shoot control pGL2 0.91 >More info 0.59 >More info shoot control total Original data GEO bulk
8 root hypoxia p35S 0.73 >More info 0.72 >More info root hypoxia total hypoxia root Original data GEO bulk
9 Seedling-control POLYSOMESmRNA 0.77 >More info 0.67 >More info Seedling-control TOTALmRNA seedling Original data
10 Imbibed 1 h (seed) 0.78 >More info 0.64 >More info Dry seed Original data Time course of early seed germination
11 GRX-overexpression seedlings MV 0.73 >More info 0.64 >More info WT seedlings MV Seedlings Original data GEO bulk
12 root control p35S 0.78 >More info 0.59 >More info root control total control root Original data GEO bulk
13 shoot hypoxia pSUC2 0.86 >More info 0.48 >More info shoot hypoxia total Original data GEO bulk
14 root hypoxia pRPL11C 0.71 >More info 0.62 >More info root hypoxia total hypoxia root Original data GEO bulk
15 35S:ATR1 like miR -0.66 >More info -0.66 >More info WT for miR Original data GEO bulk
16 shoot control pSUC2 0.84 >More info 0.45 >More info shoot control total Original data GEO bulk
17 gpa1 +ABA LF -0.59 >More info -0.67 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
18 Mutant gh3.5-1D -0.64 >More info -0.60 >More info Col-0 Original data GEO bulk
19 shoot hypoxia pKAT1 0.84 >More info 0.40 >More info shoot hypoxia total Original data GEO bulk
20 xyl-grown cell culture- 1h 1mM Suc 0.59 >More info 0.64 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
21 mbd11 mutant thaliana 10-day-old seedling 0.59 >More info 0.61 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
22 root control pRPL11C 0.73 >More info 0.45 >More info root control total control root Original data GEO bulk
23 GST-overexpression seedlings control 0.71 >More info 0.46 >More info WT seedlings control Seedlings Original data
24 estradiole-induced ANAC059 0.58 >More info 0.56 >More info transgenic (empty vector inducible system) Original data GEO bulk
25 ANOXIA -0.51 >More info -0.61 >More info ANOXIA+SUCROSE Original data GEO bulk
26 Laer pretreat GA Flg22 1h 0.41 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
27 roottip control pSCR -0.43 >More info -0.68 >More info roottip control total control roottip Original data GEO bulk
28 roottip hypoxia pSCR -0.53 >More info -0.56 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
29 shoot hypoxia pCER5 0.65 >More info 0.43 >More info shoot hypoxia total Original data GEO bulk
30 roottip hypoxia pWOL -0.52 >More info -0.55 >More info roottip hypoxia total Original data GEO bulk
31 Leafminer damaged seedlings 0.51 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
32 des1.1 0.65 >More info 0.42 >More info Leaves-WT leaf Original data GEO bulk
33 vte2 leaves 0h LT -0.46 >More info -0.61 >More info Col leaves 0h LT h 9-11th adult leaves Original data
34 bHLH122 ox -0.49 >More info -0.58 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
35 F1 whole seedlings root 0.67 >More info 0.39 >More info Col whole seedlings root Seedlings Original data GEO bulk
36 agb1 +ABA LF -0.51 >More info -0.55 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
37 L2.5 mutant 0.46 >More info 0.60 >More info Wt Original data GEO bulk
38 Ba1 UV 0.63 >More info 0.42 >More info Ba1 mock UV seedling Original data
39 Col-0 +ABA LF 0.54 >More info 0.49 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
40 cngc1-3 0.75 >More info 0.28 >More info Col-0 root Original data GEO bulk
41 gh3.5D uninoculated -0.58 >More info -0.43 >More info Col-0 48 hpi Original data GEO bulk
42 Col0-PsmES4326-24hpi 0.40 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
43 ACN1-2 -0.54 >More info -0.46 >More info col-7 Original data GEO bulk
44 agb1 gpa1 +ABA LF -0.58 >More info -0.42 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
45 Shoot -K 0.51 >More info 0.48 >More info Control-shoot Original data GEO bulk
46 Mutant iaa17-6 (IAA) 0.69 >More info 0.30 >More info Col (IAA) Original data GEO bulk
47 K starvation (shoot) 0.51 >More info 0.48 >More info Ws (shoot) Original data GEO bulk
48 mutant acs1A (single mutant) -0.56 >More info -0.42 >More info col control (single mutant) Original data GEO bulk
49 Ler 10C long-day 0.53 >More info 0.44 >More info Ler 20C long-day seeds Original data GEO bulk
50 efr-1 untreated -0.72 >More info -0.25 >More info WT untreated untreated Original data GEO bulk
51 mutant acs2C (single mutant) -0.55 >More info -0.41 >More info col control (single mutant) Original data GEO bulk
52 6h volatiles Sm. R3089 -0.57 >More info -0.39 >More info 6h untreated whole seedling Original data GEO bulk
53 QC pSCR 0h BL -0.70 >More info -0.26 >More info WR 35S 0h BL brassinosteroid root Original data
54 Col BTH 0.28 >More info 0.67 >More info Col rosettes Original data GEO bulk
55 Oxidative Stress 3 h (root) -0.53 >More info -0.42 >More info Stress mock 3 h (root) Original data Stress treatments
56 sicy-192 gun1-101 cotyledons 0.63 >More info 0.32 >More info WT cotyledons cotyledons Original data
57 rcf1-1 cold 24h 0.51 >More info 0.42 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
58 agb1 gpa1 -ABA LF 0.38 >More info 0.54 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
59 35S:MYB28 like miR -0.58 >More info -0.34 >More info WT for miR Original data GEO bulk
60 mutant acs4A (single mutant) -0.52 >More info -0.39 >More info col control (single mutant) Original data GEO bulk
61 over-tAPX 0.50 >More info 0.41 >More info WT Col Original data GEO bulk
62 35S:RPS4 rrs1-11 2h -0.57 >More info -0.34 >More info 35S:RPS4 2h leaves Original data
63 MYB29 OE 0.62 >More info 0.29 >More info WT for MYB29/76 Original data GEO bulk
64 stn7-1 -0.52 >More info -0.38 >More info Col-0 rosette leaves Original data GEO bulk
65 2hr continuous KNO3 and MSX and Gln PeR cell 0.53 >More info 0.37 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
66 root control pSultr2:2 0.68 >More info 0.22 >More info root control total control root Original data GEO bulk
67 oxt6:AtCPSF30 line -0.34 >More info -0.55 >More info oxt6 mutant Original data GEO bulk
68 abi4-102 (II) 0.51 >More info 0.38 >More info Col (II) rosette Original data GEO bulk
69 MYB76 OE 0.62 >More info 0.27 >More info WT for MYB29/76 Original data GEO bulk
70 3.5h KNO3 Whole root -0.37 >More info -0.52 >More info 3.5h KCl control Whole root Whole root Original data GEO bulk
71 root cap pGL2 0h BL -0.57 >More info -0.32 >More info WR 35S 0h BL brassinosteroid root Original data
72 Mutant arf2-6 -0.70 >More info -0.19 >More info Col Original data GEO bulk
73 mutant acs5D (single mutant) -0.55 >More info -0.33 >More info col control (single mutant) Original data GEO bulk
74 phr1 Root-Pi 0.64 >More info 0.24 >More info WT Root+Pi roots Original data GEO bulk
75 Polysomal RNA 35S:AtCSP1-FH1 cold 0.66 >More info 0.22 >More info Polysomal RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
76 12h volatiles Sp. HRO-C48 -0.61 >More info -0.26 >More info 12h untreated whole seedling Original data GEO bulk
77 Heat shock optimum 0.22 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
78 shoot control pCER5 0.68 >More info 0.18 >More info shoot control total Original data GEO bulk
79 gun1-9 norflurazon 0.59 >More info 0.27 >More info gun1-9 control Original data GEO bulk
80 root control pWOL 0.65 >More info 0.21 >More info root control total control root Original data GEO bulk
81 oas-a1.1 shoot -0.59 >More info -0.27 >More info WT-Untreated Shoot Original data GEO bulk
82 shoot control pKAT1 0.67 >More info 0.18 >More info shoot control total Original data GEO bulk
83 ago4-1 0.52 >More info 0.33 >More info WT La-er whole plants Original data GEO bulk
84 Control KNO3 roots - 2hours 0.56 >More info 0.29 >More info Control KCl roots - 2hours 5mM KNO3 on both sides for 2 hours roots Original data GEO bulk
85 Total RNA 35S:AtCSP1-FH1 cold 0.67 >More info 0.18 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
86 root stele -S -0.31 >More info -0.54 >More info root stele pH5.7 Original data GEO bulk
87 wrky72-1-NOCO2 INFECTED -0.53 >More info -0.31 >More info WT-NOCO2 INFECTED Original data GEO bulk
88 ORS1 induced 0.52 >More info 0.32 >More info mock-induced rosette leaves Original data GEO bulk
89 root hypoxia pWOL 0.61 >More info 0.23 >More info root hypoxia total hypoxia root Original data GEO bulk
90 toc1-1-61hr -0.60 >More info -0.24 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
91 bZIP1ko mutant N+Light+ 0.50 >More info 0.33 >More info WT-sib N+Light+ whole plant Original data GEO bulk
92 whole roots 140 mM NaCl 30 minutes 0.56 >More info 0.27 >More info whole roots standard Original data GEO bulk
93 15m.KNO3 -0.67 >More info -0.16 >More info To. KNO3 14 day old Roots Original data GEO bulk
94 akt1-1 0.62 >More info 0.21 >More info Ws-2 Seedlings Original data GEO bulk
95 gpa1-4/agb1-2 ozone 2d -0.62 >More info -0.20 >More info Col ozone 2d ozone Original data GEO bulk
96 root hypoxia pSHR 0.60 >More info 0.22 >More info root hypoxia total hypoxia root Original data GEO bulk
97 Root dark control 7h -0.62 >More info -0.19 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
98 rsa3-1 Na 24h 0.52 >More info 0.28 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
99 npr1-3 DCA 48h -0.50 >More info -0.30 >More info npr1-3 MOCK 48h Original data GEO bulk
100 fil-8 yab3-2 0.60 >More info 0.20 >More info wt Apices Original data GEO bulk
101 root control pSUC2 0.60 >More info 0.20 >More info root control total control root Original data GEO bulk
102 root longitudinal zone-1 low sulfur -0.25 >More info -0.55 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
103 WT Root-Pi 0.75 >More info 0.04 >More info WT Root+Pi roots Original data GEO bulk
104 SAB 0.56 >More info 0.23 >More info COL seedling Original data
105 seed germinating in countinuous light 24h SL 0.12 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
106 bri1-5 mutant -0.51 >More info -0.27 >More info WT 7 day-old whole seedlings Original data
107 root hypoxia pPEP 0.55 >More info 0.23 >More info root hypoxia total hypoxia root Original data GEO bulk
108 Mutant arf19-1 (IAA) -0.56 >More info -0.22 >More info Col (IAA) Original data GEO bulk
109 WT resupplied Pi 4h 0.66 >More info 0.12 >More info WT complete seedlings Original data
110 Col laser microdissected 5 dpi 0.56 >More info 0.22 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
111 Elevated CO2 fully expanded leaf 0.57 >More info 0.21 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
112 GRX-overexpression seedlings control 0.69 >More info 0.09 >More info WT seedlings control Seedlings Original data GEO bulk
113 ga1-3 SCL3OE -0.57 >More info -0.21 >More info ga1-3 whole root Original data
114 seedling 30 min S Exp -0.57 >More info -0.20 >More info seedling -S Exp seedling Original data
115 Ws 100mM NaCl 0.59 >More info 0.17 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
116 20d after anthesis 0.59 >More info 0.17 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
117 Ws leaf 100mM NaCl 0.59 >More info 0.17 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
118 Mutant arf2-6 (IAA) -0.58 >More info -0.18 >More info Col (IAA) Original data GEO bulk
119 Polysomal RNA 35S:AtCSP1-FH1 0.53 >More info 0.23 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
120 IAA7mII over-expressor IAA Treated 0.07 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
121 mdh 0.63 >More info 0.12 >More info Col Original data GEO bulk
122 root cap pGL2(QC pSCRBRI1) 0h BL -0.61 >More info -0.14 >More info WR 35S 0h BL brassinosteroid root Original data
123 HAP5-triple-mutant 0.51 >More info 0.24 >More info Col control above-ground whole plant Original data GEO bulk
124 35S:PCO1 hypoxia -0.68 >More info -0.07 >More info WT hypoxia whole rosette Original data
125 roottip hypoxia pSHR -0.24 >More info -0.51 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
126 atmyc2 Seedling BL -0.23 >More info -0.52 >More info WT Seedling BL Original data GEO bulk
127 ga1 24h seed 0.56 >More info 0.18 >More info Ler WATER 24h seed water seed Original data GEO bulk
128 cdm1 mutant floral young floral buds 0.50 >More info 0.24 >More info WT floral yound floral buds Unopen flower buds Original data
129 2h KNO3 Whole root 0.58 >More info 0.16 >More info 2h KCl control Whole root Whole root Original data GEO bulk
130 Imbibed 24 h ABA 30uM (seed) -0.65 >More info -0.08 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
131 P35S:rGRF1 -0.51 >More info -0.22 >More info Col-0 Original data GEO bulk
132 Col ozone 2d 0.58 >More info 0.15 >More info Col clean-air 2d ozone Original data GEO bulk
133 csn3-1 dark -0.57 >More info -0.16 >More info WT dark Original data GEO bulk
134 aerial organ callus inducing medium 96 h 0.62 >More info 0.11 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
135 cngc19 0.68 >More info 0.04 >More info Col-0 root Original data GEO bulk
136 Var2-1 roots 2hr KNO3 nitrogen -0.55 >More info -0.17 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
137 mbd6 mutant thaliana 10-day-old seedling 0.51 >More info 0.21 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
138 gir root 4%glc 0.53 >More info 0.19 >More info Col-7 root 4%glc root Original data GEO bulk
139 lateral root cap-columella pBRN2 0h BL -0.63 >More info -0.09 >More info WR 35S 0h BL brassinosteroid root Original data
140 spx1 spx2 complete 0.55 >More info 0.16 >More info WT complete seedlings Original data
141 PRR5-VP 12h light on -0.56 >More info -0.15 >More info WT 12h light on whole plant Original data GEO bulk
142 35S::Zat12 -0.67 >More info -0.04 >More info WT Original data GEO bulk
143 high-R:FR bud axillary 0.57 >More info 0.14 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
144 Al treated 0.53 >More info 0.18 >More info control Original data GEO bulk
145 WT in -N 0.56 >More info 0.14 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
146 axr2-BR -0.53 >More info -0.17 >More info BR BR dark-grown seedlings Original data GEO bulk
147 oas-a1.1 Cd 24h 0.62 >More info 0.08 >More info Cd 24h root Shoot Original data GEO bulk
148 root longitudinal zone-2 pH 4.6 0.56 >More info 0.13 >More info root longitudinal zone-2 pH 5.7 Original data GEO bulk
149 whole roots 140 mM NaCl 1 hour 0.53 >More info 0.16 >More info whole roots standard Original data GEO bulk
150 root control pSHR 0.56 >More info 0.13 >More info root control total control root Original data GEO bulk
151 QC pSCR(QC pSCRBRI1) 0h BL -0.56 >More info -0.13 >More info WR 35S 0h BL brassinosteroid root Original data
152 siliques AtHb1 control 0.17 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
153 aerial organ callus inducing medium 24h 0.51 >More info 0.18 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
154 mutant acs9B (single mutant) -0.56 >More info -0.12 >More info col control (single mutant) Original data GEO bulk
155 ERF96OE 0.56 >More info 0.12 >More info WT leaf Original data
156 sfr2 cold 0.53 >More info 0.15 >More info WT cold All aerial tissue Original data GEO bulk
157 roottip control pSHR -0.16 >More info -0.52 >More info roottip control total control roottip Original data GEO bulk
158 CBF3 100mM NaCl -0.58 >More info -0.10 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
159 root control pGL2 0.60 >More info 0.08 >More info root control total control root Original data GEO bulk
160 bri1-116 -0.05 >More info 0.73 >More info Col seedling Original data GEO bulk
161 6xX2x interploidy cross 0.62 >More info 0.05 >More info 2xX2x cross Original data GEO bulk
162 fil-8 yab3-2 yab5-1 0.66 >More info 0.01 >More info wt Apices Original data GEO bulk
163 Split KNO3 roots - 8hours -0.54 >More info -0.13 >More info Split KCl roots - 8hours 5mM KNO3 on ONE side for 8 hours roots Original data GEO bulk
164 35S::Zat12+H2O2 0.54 >More info 0.13 >More info WT+H2O2 H2O2 Original data GEO bulk
165 aerial organ callus inducing medium 48 h 0.53 >More info 0.14 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
166 GSH 0.50 >More info 0.17 >More info control GSH treated seedlings Original data GEO bulk
167 overexpresser LBD38 in -N -0.59 >More info -0.08 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
168 KAN1-GR 60min 0.69 >More info -0.02 >More info KAN1-GR 0min Original data GEO bulk
169 csn4-1 mutant -0.55 >More info -0.11 >More info WT dark Original data GEO bulk
170 Root submergence 24h -0.52 >More info -0.14 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
171 Split KNO3 roots - 2days -0.59 >More info -0.07 >More info Split KCl roots - 2days 5mM KNO3 on ONE side for 2 days roots Original data GEO bulk
172 estradiol induced LEC1 0.61 >More info 0.04 >More info control Original data GEO bulk
173 root control pPEP 0.60 >More info 0.05 >More info root control total control root Original data GEO bulk
174 Estradiol4 days 0.61 >More info 0.04 >More info Col Original data GEO bulk
175 Leafminer locally damaged thaliana seedlings 0.51 >More info 0.13 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
176 CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold -0.63 >More info -0.01 >More info CSP1 immonoprecipitated RNA 35S:HF-RPL18 12h cold (4C) rosettes Original data GEO bulk
177 Col-0 INA 6d 0.52 >More info 0.12 >More info Col-0 MOCK 6d Original data GEO bulk
178 toc1-1-73hr -0.56 >More info -0.08 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
179 TAMM27 roots 2hr KCl control -0.52 >More info -0.12 >More info Col0 roots 2hr KCl control root Original data GEO bulk
180 TiO2 germinant -0.50 >More info -0.13 >More info Millipore Water germinant TiO2 seedling Original data
181 BAM8-Cat Ox untreated 0.55 >More info 0.08 >More info WT untreated none shoot Original data
182 apk1 apk2 0.60 >More info 0.03 >More info Col0-control whole rosette Original data GEO bulk
183 Imbibed 3 h (seed) 0.55 >More info 0.08 >More info Dry seed Original data Time course of early seed germination
184 C2H2 ZF TDNA mutant 0.62 >More info 0.01 >More info Col-WT mature pollen Original data GEO bulk
185 non-polysome mRNA eif3k 0.69 >More info -0.06 >More info non-polysome mRNA WT aerial part Original data GEO bulk
186 IAA 0h 0.55 >More info 0.07 >More info control 0h root Original data GEO bulk
187 root cells endodermis and quiescent center -Fe -0.67 >More info 0.05 >More info whole roots standard Original data GEO bulk
188 4tga safener -0.57 >More info -0.05 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
189 myb3 myb3r4d 0.51 >More info 0.11 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
190 arr10 arr12 -0.56 >More info -0.05 >More info DMSO--WT DMSO roots Original data GEO bulk
191 essp4/sdg8-5 mutant 0.52 >More info 0.09 >More info wild type leaf Original data GEO bulk
192 pkl Mutant Uniconazole -0.63 >More info 0.02 >More info pkl Mutant mock Original data GEO bulk
193 sps1 -0.50 >More info -0.11 >More info WT seedling Original data GEO bulk
194 cat2-short-day 2d -0.50 >More info -0.11 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
195 ga1 KAR1 24h seed 0.62 >More info -0.01 >More info Ler KAR1 24h seed KAR1 seed Original data GEO bulk
196 Dry pre-dawn 0.59 >More info 0.02 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
197 eds16 whole leaf 0h UI -0.53 >More info -0.07 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
198 phr1 phl1 Root-Pi 0.55 >More info 0.05 >More info WT Shoot+Pi roots Original data GEO bulk
199 Dark 6h hml -0.50 >More info -0.10 >More info 0h hml Original data
200 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.65 >More info -0.05 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
201 phyB mutant 16C 10hrs -0.04 >More info -0.55 >More info 16C 10h whole plant excluding roots Original data GEO bulk
202 Night Time Treatment 0.59 >More info -0.00 >More info Night Time Control 1hr white light pulse aerial rosette Original data
203 phr1 Shoot-Pi -0.61 >More info 0.02 >More info WT Root-Pi shoots Original data GEO bulk
204 MPK6 ox Root Hypoxia -0.61 >More info 0.02 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
205 csn4-1 dark -0.51 >More info -0.08 >More info WT light Original data GEO bulk
206 WT Bc inoculation 14h 0.52 >More info 0.06 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
207 sex1-3 0.52 >More info 0.06 >More info Col-WT leaves Original data GEO bulk
208 2hr continuous KNO3 PrR cell -0.64 >More info 0.06 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
209 inhibitor A Treated -0.56 >More info -0.02 >More info Negative Control Original data GEO bulk
210 pollinated pop2-1 flowers -0.54 >More info -0.04 >More info pollinated WT flowers flowers Original data GEO bulk
211 WT Uniconazole -0.51 >More info -0.06 >More info WT mock Original data GEO bulk
212 cop1 Seedling Dark -0.53 >More info -0.04 >More info WT Seedling Dark Original data GEO bulk
213 lec1-1 12 DAF Seed -0.54 >More info -0.03 >More info WT (WS) 12 DAF Seed developing seeds dissected from sliques Original data
214 Norflurazon 0.62 >More info -0.05 >More info Col-0 Original data GEO bulk
215 Norflurazon 0.62 >More info -0.05 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
216 tcp13 -0.52 >More info -0.04 >More info WT inflorescences Original data GEO bulk
217 WT Seedling BL -0.52 >More info -0.04 >More info WT Seedling Dark Original data GEO bulk
218 dcl1-7 -0.61 >More info 0.05 >More info Ler Original data GEO bulk
219 sid2-2 safener -0.54 >More info -0.01 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
220 seedling SPL13 0.64 >More info -0.09 >More info seedling Col-0 Original data GEO bulk
221 170G5-16 0.61 >More info -0.06 >More info Ler-2 ~600 pooled 7 mm root tips Original data GEO bulk
222 CabpBVR2 0.50 >More info 0.05 >More info WT Original data GEO bulk
223 swn-7 0.64 >More info -0.09 >More info Col whole plant Original data GEO bulk
224 NAA -AA 0.51 >More info 0.03 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
225 root epidermis and lateral root cap 40 mM NaCl -0.53 >More info -0.01 >More info root epidermis and lateral root cap Original data GEO bulk
226 FILp cells 0.54 >More info 0.00 >More info Protoplast Induced Original data GEO bulk
227 clf-28 0.50 >More info 0.03 >More info Col whole plant Original data GEO bulk
228 overexpresser LBD37 in -N -0.60 >More info 0.07 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
229 A. thaliana-A. halleri hybrid -0.56 >More info 0.04 >More info A. thaliana mature leaves before flowering Original data GEO bulk
230 whole roots 140 mM NaCl 32 hour 0.60 >More info -0.09 >More info whole roots standard Original data GEO bulk
231 root - 08% oxygen - 48h -0.52 >More info 0.01 >More info root - 21% oxygen - 48h Original data GEO bulk
232 IAA 2h -0.57 >More info 0.06 >More info control 2h root Original data GEO bulk
233 Col-0 under 4 days salt 0.54 >More info -0.04 >More info Col-0 under control 4 days salt treatment rosette Original data
234 AtMYB30-ox 2-4h Xanthomonas 0.54 >More info -0.04 >More info WT 2-4h Xanthomonas Original data GEO bulk
235 sfr3 warm 0.55 >More info -0.05 >More info WT-warm aerial tissues Original data GEO bulk
236 slr-1 0h NAA 0.55 >More info -0.05 >More info Col-0 0h NAA Original data GEO bulk
237 root longitudinal zone-1 pH 4.6 -0.53 >More info 0.04 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
238 pGL3::GL3-GR Dex 24hours -0.51 >More info 0.02 >More info pGL3::GL3-GR mock 24hours Original data GEO bulk
239 6m.KNO3 -0.59 >More info 0.10 >More info To. KNO3 14 day old Roots Original data GEO bulk
240 Drought Stress 24 h (root) 0.57 >More info -0.08 >More info Stress mock 24 h (root) Original data Stress treatments
241 8-DAC chr11-1chr17-1 -0.54 >More info 0.06 >More info 8-DAC Col-0 leaf explants Original data
242 grf1/grf2/grf3 0.51 >More info -0.03 >More info WS Original data GEO bulk
243 Imbibed 24 h ABA 3uM (seed) -0.62 >More info 0.14 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
244 W(Liq) L-AOPP 0.51 >More info -0.03 >More info W(Liq) Mock whole plant Original data GEO bulk
245 root - 08% oxygen - 30min -0.56 >More info 0.09 >More info root - 21% oxygen - 30min Original data GEO bulk
246 Col-0 DEX Shade -0.66 >More info 0.19 >More info Col-0 DEX WL seedlings Original data
247 whole roots 140 mM NaCl 16 hour 0.53 >More info -0.06 >More info whole roots standard Original data GEO bulk
248 15m.KCl -0.55 >More info 0.08 >More info To. KCl 14 day old Roots Original data GEO bulk
249 Mh0 UV -0.62 >More info 0.15 >More info Mh0 mock UV seedling Original data
250 Col-0 Mock Shade -0.52 >More info 0.06 >More info Col-0 Mock WL seedlings Original data
251 penta Flg22 1h 0.52 >More info -0.06 >More info Laer Flg22 1h leaf discs Original data GEO bulk
252 root protoplasts 40 mM NaCl -0.65 >More info 0.20 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
253 Mutant ufo-1(flower) -0.53 >More info 0.08 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
254 nhx5 -0.51 >More info 0.06 >More info WT Rosette leaf Original data GEO bulk
255 ap1-1 cal-1 35S:AGGR +DEX 1d -0.57 >More info 0.12 >More info Mock 1d Steroid Original data GEO bulk
256 root cells -Fe -0.57 >More info 0.12 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
257 Full C2 T1 0.56 >More info -0.12 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
258 6m.KCl -0.52 >More info 0.08 >More info To. KCl 14 day old Roots Original data GEO bulk
259 FLIGHT TAGESB plate6 ROOTS -0.50 >More info 0.06 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
260 KAN1-GR 30min 0.50 >More info -0.06 >More info KAN1-GR 0min Original data GEO bulk
261 vtc2 mature somatic embryo -0.25 >More info 0.69 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
262 2hr transitory KNO3 PrR cell -0.59 >More info 0.17 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
263 Methyl Violet 0.5 uM -0.58 >More info 0.17 >More info Control MV and IC Methyl Violet Original data
264 bZIP TDNA mutant 0.50 >More info -0.11 >More info Col-WT mature pollen Original data GEO bulk
265 root cortex 40 mM NaCl -0.56 >More info 0.19 >More info root cortex Original data GEO bulk
266 WT+H2O2 -0.59 >More info 0.22 >More info WT H2O2 Original data GEO bulk
267 root cells cortex -Fe -0.63 >More info 0.26 >More info whole roots standard Original data GEO bulk
268 eds16 whole leaf 6hpi -0.50 >More info 0.14 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
269 iron minus 0 h -0.55 >More info 0.20 >More info iron +0 h root Original data GEO bulk
270 inhibitor B Treated -0.60 >More info 0.25 >More info Negative Control Original data GEO bulk
271 Shoot apex inflorescence (after bolting) -0.31 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
272 Protoplast Induced -0.59 >More info 0.28 >More info Uninduced Original data GEO bulk
273 IAA/inhibitor B Treated -0.54 >More info 0.26 >More info IAA Treated Original data GEO bulk
274 2hr continuous KNO3 ECR cell 0.53 >More info -0.29 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
275 abh1 -ABA 0.55 >More info -0.31 >More info Col-0 -ABA Original data GEO bulk
276 HRE1-RNAi20 hypoxia 6 hrs 0.54 >More info -0.31 >More info Col upon hypoxia 6 hrs hypoxia seedling roots Original data GEO bulk
277 CCA1-ox 6am non-polysomal -0.36 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
278 35S:VND7-VP16-GR+DEX +CHX -0.58 >More info 0.43 >More info 35S:VND7-VP16-GR+CHX 10mM cycloheximide (CHX) 2hrs followed by 10mM dexamethazone (DEX) 4hrs whole seedlings Original data GEO bulk
279 polysome mRNA eif3k 0.59 >More info -0.44 >More info polysome mRNA WT aerial part Original data GEO bulk
280 FarRed Light 45min -0.60 >More info 0.51 >More info White Light 45min Original data Light treatments