4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root hypoxia pSHR
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List of experiments correlated with "root hypoxia pSHR"  Help Download transcriptome of top 30
Score Experiment Correlation from
root hypoxia pSHR		 Correlation to
root hypoxia pSHR		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root hypoxia pSHR 1.00 >More info 1.00 >More info root hypoxia total hypoxia root Original data GEO bulk
2 root hypoxia pWOL 0.84 >More info 0.90 >More info root hypoxia total hypoxia root Original data GEO bulk
3 root control pSHR 0.85 >More info 0.83 >More info root control total control root Original data GEO bulk
4 root control pWOL 0.78 >More info 0.82 >More info root control total control root Original data GEO bulk
5 root hypoxia pRPL11C 0.83 >More info 0.75 >More info root hypoxia total hypoxia root Original data GEO bulk
6 root control pSultr2:2 0.80 >More info 0.75 >More info root control total control root Original data GEO bulk
7 roottip hypoxia pSHR 0.76 >More info 0.79 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
8 root control pRPL11C 0.79 >More info 0.73 >More info root control total control root Original data GEO bulk
9 root control p35S 0.79 >More info 0.72 >More info root control total control root Original data GEO bulk
10 root hypoxia pCO2 0.71 >More info 0.80 >More info root hypoxia total hypoxia root Original data GEO bulk
11 roottip hypoxia p35S 0.75 >More info 0.75 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
12 root control pGL2 0.76 >More info 0.71 >More info root control total control root Original data GEO bulk
13 root hypoxia p35S 0.77 >More info 0.67 >More info root hypoxia total hypoxia root Original data GEO bulk
14 root hypoxia pGL2 0.75 >More info 0.68 >More info root hypoxia total hypoxia root Original data GEO bulk
15 roottip control p35S 0.70 >More info 0.64 >More info roottip control total control roottip Original data GEO bulk
16 root control pCO2 0.64 >More info 0.69 >More info root control total control root Original data GEO bulk
17 roottip control pSHR 0.69 >More info 0.62 >More info roottip control total control roottip Original data GEO bulk
18 roottip control pWOL 0.58 >More info 0.71 >More info roottip control total control roottip Original data GEO bulk
19 root hypoxia pSCR 0.66 >More info 0.60 >More info root hypoxia total hypoxia root Original data GEO bulk
20 roottip hypoxia pWOL 0.53 >More info 0.66 >More info roottip hypoxia total Original data GEO bulk
21 root hypoxia pSUC2 0.57 >More info 0.62 >More info root hypoxia total hypoxia root Original data GEO bulk
22 stele pSHR 0h BL 0.70 >More info 0.48 >More info WR 35S 0h BL brassinosteroid root Original data
23 Chemically 0.49 >More info 0.64 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
24 root control pSCR 0.52 >More info 0.57 >More info root control total control root Original data GEO bulk
25 root cells stele 140mM NaCl 1 hour 0.47 >More info 0.59 >More info root cells stele standard 1 hour root cells stele Original data
26 root control pSUC2 0.54 >More info 0.51 >More info root control total control root Original data GEO bulk
27 root cells stele 140mM NaCl 3 hours 0.50 >More info 0.55 >More info root cells stele standard 1 hour root cells stele Original data
28 root cells stele 140mM NaCl 48 hours 0.46 >More info 0.58 >More info root cells stele standard 1 hour root cells stele Original data
29 shoot hypoxia pKAT1 0.48 >More info 0.55 >More info shoot hypoxia total Original data GEO bulk
30 root cells stele 140mM NaCl 8 hours 0.48 >More info 0.52 >More info root cells stele standard 1 hour root cells stele Original data
31 shoot control pSultr2:2 0.43 >More info 0.56 >More info shoot control total Original data GEO bulk
32 bri1-116 0.26 >More info 0.73 >More info Col seedling Original data GEO bulk
33 SHR-GR Time 12H Dex 0.45 >More info 0.53 >More info SHR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
34 atmyc2 Seedling Dark -0.55 >More info -0.42 >More info WT Seedling Dark Original data GEO bulk
35 root cells stele 140mM NaCl 32 hours 0.41 >More info 0.55 >More info root cells stele standard 1 hour root cells stele Original data
36 bbx24 in Simulated Shade -0.44 >More info -0.52 >More info WT in simulated shade shade seedling Original data
37 root epidermis and lateral root cap -S 0.60 >More info 0.35 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
38 MG132 3 h 0.38 >More info 0.56 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
39 shoot hypoxia pGL2 0.38 >More info 0.56 >More info shoot hypoxia total Original data GEO bulk
40 toc1-1-81hr 0.25 >More info 0.69 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
41 root cells epidermis 140mM NaCl 1 hour 0.37 >More info 0.56 >More info root cells epidermis standard 1 hour root cells epidermis Original data
42 epidermis auxin 0.51 >More info 0.42 >More info epidermis control 5 uM indole-3-acetic acid epidermis Original data GEO bulk
43 inhibitor B Treated 0.50 >More info 0.43 >More info Negative Control Original data GEO bulk
44 root cap pGL2(root cap pGL2BRI1) 0h BL -0.52 >More info -0.40 >More info WR 35S 0h BL brassinosteroid root Original data
45 DUO1 induced 24h 0.38 >More info 0.54 >More info 24hr-not-induced whole plant Original data GEO bulk
46 DUO1 induced 12h 0.36 >More info 0.56 >More info 12hr-not-induced whole plant Original data GEO bulk
47 Heat shock optimum 0.27 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
48 2hr continuous KNO3 and MSX and Gln PeR cell 0.39 >More info 0.51 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
49 T101D 10mM NH4NO3 -0.39 >More info -0.51 >More info col 10mM NH4NO3 Root Original data
50 GO5; 0h switch to ambient CO2 concentrations; 0.35 >More info 0.55 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
51 root cells epidermis 140mM NaCl 8 hours 0.36 >More info 0.53 >More info root cells epidermis standard 1 hour root cells epidermis Original data
52 IAA/inhibitor B Treated 0.50 >More info 0.38 >More info IAA Treated Original data GEO bulk
53 root cells epidermis 140mM NaCl 32 hours 0.37 >More info 0.50 >More info root cells epidermis standard 1 hour root cells epidermis Original data
54 GST 4 h (leaf) -0.28 >More info -0.58 >More info Mock 4 h (leaf) Original data Elicitor treatments
55 toc1-1-85hr 0.26 >More info 0.60 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
56 root cells epidermis 140mM NaCl 3 hours 0.34 >More info 0.51 >More info root cells epidermis standard 1 hour root cells epidermis Original data
57 Mutant axr3-1 (IAA) 0.30 >More info 0.53 >More info Col (IAA) Original data GEO bulk
58 DUO1 induced 6h 0.26 >More info 0.57 >More info 6hr-not-induced whole plant Original data GEO bulk
59 Col-0 Flg22 4h -0.24 >More info -0.58 >More info Col-0 H2O 4h Original data GEO bulk
60 shoot hypoxia p35S 0.22 >More info 0.60 >More info shoot hypoxia total Original data GEO bulk
61 root hair -0.53 >More info -0.28 >More info Control for tissue data root hairs Original data GEO bulk
62 Mh0 UV 0.30 >More info 0.50 >More info Mh0 mock UV seedling Original data
63 Total RNA 35S:HF-RPL18 -0.16 >More info -0.63 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
64 WT light 0.50 >More info 0.26 >More info WT dark Original data GEO bulk
65 root cells stele 140mM NaCl 20 hours 0.24 >More info 0.52 >More info root cells stele standard 1 hour root cells stele Original data
66 mutant acs9B (single mutant) -0.53 >More info -0.22 >More info col control (single mutant) Original data GEO bulk
67 IAA7mII over-expressor IAA Treated 0.05 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
68 upb1-1 elongation zone -0.22 >More info -0.52 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
69 Whole root - low pH 48H -0.56 >More info -0.17 >More info Whole root - Std pH 48H pH 4.6 for 48 hr Original data GEO bulk
70 cpctry 0.18 >More info 0.55 >More info Col Original data GEO bulk
71 35S:MYB28 like miR -0.11 >More info -0.59 >More info WT for miR Original data GEO bulk
72 35S:ATR1 like miR -0.18 >More info -0.50 >More info WT for miR Original data GEO bulk
73 Shoot apex inflorescence (after bolting) 0.02 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
74 shoot control p35S 0.16 >More info 0.51 >More info shoot control total Original data GEO bulk
75 irradiated leaf (WT 5d) 0.10 >More info 0.56 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
76 TNT-seedlings 0.11 >More info 0.53 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
77 3x(m) 0.08 >More info 0.55 >More info 2x two week old seedlings Original data
78 xyl-grown cell culture- 1h 1mM Suc 0.07 >More info 0.54 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
79 Polysomal RNA 35S:HF-RPL18 0.07 >More info -0.60 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
80 Col BTH -0.14 >More info 0.67 >More info Col rosettes Original data GEO bulk
81 seed germinating in countinuous light 24h SL -0.16 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
82 WT Shoot Hypoxia -0.04 >More info 0.53 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
83 siliques AtHb1 control -0.05 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
84 Laer pretreat GA Flg22 1h -0.26 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
85 Col0-PsmES4326-24hpi -0.25 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
86 CCA1-ox 6am non-polysomal -0.19 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
87 Leafminer damaged seedlings -0.27 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk