4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root cells stele 140mM NaCl 8 hours
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Score Experiment Correlation from
root cells stele 140mM NaCl 8 hours		 Correlation to
root cells stele 140mM NaCl 8 hours		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root cells stele 140mM NaCl 8 hours 1.00 >More info 1.00 >More info root cells stele standard 1 hour root cells stele Original data
2 root cells stele 140mM NaCl 3 hours 0.91 >More info 0.90 >More info root cells stele standard 1 hour root cells stele Original data
3 root cells stele 140mM NaCl 20 hours 0.88 >More info 0.92 >More info root cells stele standard 1 hour root cells stele Original data
4 root cells stele 140mM NaCl 32 hours 0.86 >More info 0.92 >More info root cells stele standard 1 hour root cells stele Original data
5 root cells stele 140mM NaCl 48 hours 0.86 >More info 0.91 >More info root cells stele standard 1 hour root cells stele Original data
6 root cells stele 140mM NaCl 1 hour 0.84 >More info 0.88 >More info root cells stele standard 1 hour root cells stele Original data
7 root cells cortex 140mM NaCl 8 hours 0.88 >More info 0.82 >More info root cells cortex standard 1 hour root cells cortex Original data
8 root cells endodermis 140mM NaCl 3 hours 0.84 >More info 0.83 >More info root cells endodermis standard 1 hour root cells endodermis Original data
9 root cells endodermis 140mM NaCl 8 hours 0.84 >More info 0.83 >More info root cells endodermis standard 1 hour root cells endodermis Original data
10 root cells endodermis 140mM NaCl 20 hours 0.82 >More info 0.81 >More info root cells endodermis standard 1 hour root cells endodermis Original data
11 root cells epidermis 140mM NaCl 8 hours 0.78 >More info 0.84 >More info root cells epidermis standard 1 hour root cells epidermis Original data
12 root cells epidermis 140mM NaCl 3 hours 0.76 >More info 0.85 >More info root cells epidermis standard 1 hour root cells epidermis Original data
13 root cells cortex 140mM NaCl 3 hours 0.82 >More info 0.77 >More info root cells cortex standard 1 hour root cells cortex Original data
14 root cells epidermis 140mM NaCl 20 hours 0.75 >More info 0.83 >More info root cells epidermis standard 1 hour root cells epidermis Original data
15 root cells endodermis 140mM NaCl 48 hours 0.79 >More info 0.79 >More info root cells endodermis standard 1 hour root cells endodermis Original data
16 root cells endodermis 140mM NaCl 32 hours 0.78 >More info 0.79 >More info root cells endodermis standard 1 hour root cells endodermis Original data
17 root cells epidermis 140mM NaCl 48 hours 0.74 >More info 0.81 >More info root cells epidermis standard 1 hour root cells epidermis Original data
18 root cells endodermis 140mM NaCl 1 hour 0.77 >More info 0.77 >More info root cells endodermis standard 1 hour root cells endodermis Original data
19 root cells cortex 140mM NaCl 20 hours 0.79 >More info 0.75 >More info root cells cortex standard 1 hour root cells cortex Original data
20 root cells cortex 140mM NaCl 1 hour 0.76 >More info 0.77 >More info root cells cortex standard 1 hour root cells cortex Original data
21 root cells epidermis 140mM NaCl 32 hours 0.70 >More info 0.82 >More info root cells epidermis standard 1 hour root cells epidermis Original data
22 root cells epidermis 140mM NaCl 1 hour 0.67 >More info 0.84 >More info root cells epidermis standard 1 hour root cells epidermis Original data
23 root cells cortex 140mM NaCl 32 hours 0.75 >More info 0.74 >More info root cells cortex standard 1 hour root cells cortex Original data
24 root longitudinal zone-4 NaCl 0.69 >More info 0.76 >More info root longitudinal zone-4 Original data GEO bulk
25 root cells cortex 140mM NaCl 48 hours 0.73 >More info 0.67 >More info root cells cortex standard 1 hour root cells cortex Original data
26 whole roots 140 mM NaCl 4 hour 0.62 >More info 0.71 >More info whole roots standard Original data GEO bulk
27 NaCl Col 0.59 >More info 0.69 >More info Col Original data GEO bulk
28 line J1551-5 days control + 2 days salt s 0.50 >More info 0.72 >More info line J1551-7 days-control Original data
29 root Dosed gold 0.68 >More info 0.53 >More info root No gold .125 mM gold 24 h roots Original data
30 0.125 mM gold 24 h 0.68 >More info 0.53 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
31 root endodermis and quiescent center 40 mM NaCl 0.50 >More info 0.70 >More info root endodermis and quiescent center Original data GEO bulk
32 AgNO3 3 h 0.47 >More info 0.73 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
33 24h +Pi -0.62 >More info -0.56 >More info 24h -Pi root Original data GEO bulk
34 root epidermis and lateral root cap -S 0.56 >More info 0.62 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
35 root stele pH4.6 0.64 >More info 0.52 >More info root stele pH5.7 Original data GEO bulk
36 root epidermis and lateral root cap pH4.6 0.51 >More info 0.64 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
37 root longitudinal zone-3 pH 4.6 0.46 >More info 0.69 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
38 bbx24 in Simulated Shade -0.47 >More info -0.68 >More info WT in simulated shade shade seedling Original data
39 whole roots 140 mM NaCl 1 hour 0.55 >More info 0.59 >More info whole roots standard Original data GEO bulk
40 whole roots 140 mM NaCl 30 minutes 0.50 >More info 0.63 >More info whole roots standard Original data GEO bulk
41 epidermis auxin 0.53 >More info 0.59 >More info epidermis control 5 uM indole-3-acetic acid epidermis Original data GEO bulk
42 oas-a1.1 Cd 18h 0.45 >More info 0.67 >More info Cd 18h root Root Original data GEO bulk
43 upb1-1 elongation zone -0.49 >More info -0.63 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
44 Chemically 0.38 >More info 0.69 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
45 whole roots 140 mM NaCl 16 hour 0.51 >More info 0.55 >More info whole roots standard Original data GEO bulk
46 whole roots -Fe 6 hour 0.33 >More info 0.70 >More info whole roots standard Original data GEO bulk
47 TNT-seedlings 0.40 >More info 0.63 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
48 root stele 40 mM NaCls 0.57 >More info 0.45 >More info root stele Original data GEO bulk
49 inhibitor B Treated 0.52 >More info 0.50 >More info Negative Control Original data GEO bulk
50 Chitosan 3h Treatment 0.51 >More info 0.51 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
51 Fe starvation 72 h 0.46 >More info 0.55 >More info Control Original data GEO bulk
52 whole roots -Fe 72 hour 0.46 >More info 0.55 >More info whole roots standard Original data GEO bulk
53 root columella root cap 40 mM NaCl 0.47 >More info 0.54 >More info root columella root cap Original data GEO bulk
54 line J2731-5 days control + 2 days salt s 0.42 >More info 0.59 >More info line J2731-7 days-control Original data
55 root hypoxia pSHR 0.52 >More info 0.48 >More info root hypoxia total hypoxia root Original data GEO bulk
56 OXUPB1-2 meristematic zone 0.54 >More info 0.46 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
57 5-Triiodobenzoic acid3 h 0.49 >More info 0.50 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
58 root longitudinal zone-3 NaCl 0.42 >More info 0.57 >More info root longitudinal zone-3 Original data GEO bulk
59 root control p35S 0.58 >More info 0.40 >More info root control total control root Original data GEO bulk
60 Osmotic Stress 24 h (root) 0.56 >More info 0.41 >More info Stress mock 24 h (root) Original data Stress treatments
61 rhd2 0.44 >More info 0.53 >More info WT Small excised segments of primary root tissue corresponding to root-hair elongation zone Original data GEO bulk
62 roots IAA 0.39 >More info 0.58 >More info roots mock Original data GEO bulk
63 whole roots -Fe 48 hour 0.46 >More info 0.50 >More info whole roots standard Original data GEO bulk
64 root control pRPL11C 0.56 >More info 0.38 >More info root control total control root Original data GEO bulk
65 Whole root - low pH 12H 0.43 >More info 0.51 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
66 whole roots 140 mM NaCl 32 hour 0.42 >More info 0.52 >More info whole roots standard Original data GEO bulk
67 root cortex pH4.6 0.37 >More info 0.55 >More info root cortex pH5.7 Original data GEO bulk
68 ABA DFPM 0.52 >More info 0.39 >More info control Original data GEO bulk
69 columella auxin 0.40 >More info 0.50 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
70 M6PR transgenic leaf 100mM NaCl -0.34 >More info -0.55 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
71 ABA 3 h 0.38 >More info 0.51 >More info Mock 3 h Original data Basic hormone treatment of seedlings
72 bri1-116 0.15 >More info 0.73 >More info Col seedling Original data GEO bulk
73 stele pSHR 0h BL 0.57 >More info 0.30 >More info WR 35S 0h BL brassinosteroid root Original data
74 Leafminer damaged seedlings 0.30 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
75 dor drought 0.31 >More info 0.54 >More info WT drought Original data GEO bulk
76 siliques AtHb1 control 0.33 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
77 roottip hypoxia total 0.18 >More info 0.66 >More info roottip control total Original data GEO bulk
78 Heat shock optimum 0.19 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
79 Col BTH 0.17 >More info 0.67 >More info Col rosettes Original data GEO bulk
80 B.cinerea 18 h infection 0.23 >More info 0.61 >More info Mock 18 h Original data Botrytis cinerea infection
81 Botrytis cinerea 18h 0.23 >More info 0.61 >More info control 18h Original data GEO bulk
82 Mutant axr3-1 (IAA) 0.29 >More info 0.54 >More info Col (IAA) Original data GEO bulk
83 Root wt CLE10 0.30 >More info 0.53 >More info Root wt CLE25 root tip Original data GEO bulk
84 aux1 mutant roots ethylene 0.27 >More info 0.56 >More info roots air Original data GEO bulk
85 Col0-PsmES4326-24hpi 0.22 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
86 SCR-GR Time 3H Dex 0.19 >More info 0.63 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
87 shoots bhlh100/101 100uM Fe 0.00 >More info -0.80 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
88 Salt Stress 24 h (root) 0.50 >More info 0.29 >More info Stress mock 24 h (root) Original data Stress treatments
89 MG132 3 h 0.28 >More info 0.50 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
90 root hypoxia p35S 0.52 >More info 0.25 >More info root hypoxia total hypoxia root Original data GEO bulk
91 Mutant arf2-6 (IAA) 0.24 >More info 0.53 >More info Col (IAA) Original data GEO bulk
92 CeO2 germinant -0.17 >More info -0.60 >More info Millipore Water germinant CeO2 seedling Original data
93 SCR 72hr-S 0.27 >More info 0.50 >More info SCR 0hr endodermis Original data
94 root cap pGL2 0h BL -0.52 >More info -0.24 >More info WR 35S 0h BL brassinosteroid root Original data
95 toc1-1-81hr 0.20 >More info 0.54 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
96 seed germinating in countinuous light 24h SL 0.07 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
97 Laer pretreat GA Flg22 1h 0.02 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
98 35S:VND7-VP16-GR+DEX +CHX 0.16 >More info 0.57 >More info 35S:VND7-VP16-GR+CHX 10mM cycloheximide (CHX) 2hrs followed by 10mM dexamethazone (DEX) 4hrs whole seedlings Original data GEO bulk
99 root longitudinal zone-1 NaCl 0.22 >More info 0.50 >More info root longitudinal zone-1 Original data GEO bulk
100 Shoot apex inflorescence (after bolting) 0.06 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
101 root - 01% oxygen - 48h 0.21 >More info 0.50 >More info root - 21% oxygen - 48h Original data GEO bulk
102 GO5; harvested 8h continiously maintained in high
CO2;		 -0.12 >More info -0.58 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
103 BAM8-Lig Ox untreated 0.15 >More info 0.53 >More info WT untreated none shoot Original data
104 root - 08% oxygen - 30min 0.12 >More info 0.55 >More info root - 21% oxygen - 30min Original data GEO bulk
105 eds16 whole leaf 1dpi 0.11 >More info 0.55 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
106 toc1-1-53hr 0.11 >More info 0.54 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
107 Mh0 UV 0.09 >More info 0.53 >More info Mh0 mock UV seedling Original data
108 IAA7mII over-expressor IAA Treated -0.08 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
109 red illumination +lincomycin -0.02 >More info 0.61 >More info red illumination -lincomycin Original data GEO bulk
110 SA 24h -0.03 >More info -0.54 >More info EtOH 24h 24hr Original data GEO bulk
111 EBE-XVE +estradiol -0.02 >More info 0.59 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
112 xyl-grown cell culture- 1h 1mM Glc -0.02 >More info -0.53 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
113 CCA1-ox 6am non-polysomal -0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
114 root - 04% oxygen - 2h -0.09 >More info 0.59 >More info root - 21% oxygen - 2h Original data GEO bulk
115 akt1-1 -0.01 >More info 0.50 >More info Ws-2 Seedlings Original data GEO bulk
116 35S:VND7-VP16-GR+CHX -0.15 >More info 0.52 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk