4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root cells endodermis 140mM NaCl 48 hours
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Score Experiment Correlation from
root cells endodermis 140mM NaCl 48 hours		 Correlation to
root cells endodermis 140mM NaCl 48 hours		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root cells endodermis 140mM NaCl 48 hours 1.00 >More info 1.00 >More info root cells endodermis standard 1 hour root cells endodermis Original data
2 root cells endodermis 140mM NaCl 32 hours 0.93 >More info 0.95 >More info root cells endodermis standard 1 hour root cells endodermis Original data
3 root cells endodermis 140mM NaCl 20 hours 0.90 >More info 0.90 >More info root cells endodermis standard 1 hour root cells endodermis Original data
4 root cells endodermis 140mM NaCl 8 hours 0.88 >More info 0.84 >More info root cells endodermis standard 1 hour root cells endodermis Original data
5 root cells endodermis 140mM NaCl 3 hours 0.87 >More info 0.84 >More info root cells endodermis standard 1 hour root cells endodermis Original data
6 root cells cortex 140mM NaCl 48 hours 0.83 >More info 0.83 >More info root cells cortex standard 1 hour root cells cortex Original data
7 root cells stele 140mM NaCl 32 hours 0.82 >More info 0.83 >More info root cells stele standard 1 hour root cells stele Original data
8 root cells stele 140mM NaCl 48 hours 0.83 >More info 0.82 >More info root cells stele standard 1 hour root cells stele Original data
9 root cells epidermis 140mM NaCl 48 hours 0.80 >More info 0.85 >More info root cells epidermis standard 1 hour root cells epidermis Original data
10 root cells cortex 140mM NaCl 32 hours 0.81 >More info 0.83 >More info root cells cortex standard 1 hour root cells cortex Original data
11 root cells endodermis 140mM NaCl 1 hour 0.80 >More info 0.84 >More info root cells endodermis standard 1 hour root cells endodermis Original data
12 root cells epidermis 140mM NaCl 32 hours 0.77 >More info 0.84 >More info root cells epidermis standard 1 hour root cells epidermis Original data
13 root cells stele 140mM NaCl 20 hours 0.79 >More info 0.81 >More info root cells stele standard 1 hour root cells stele Original data
14 root cells epidermis 140mM NaCl 20 hours 0.78 >More info 0.82 >More info root cells epidermis standard 1 hour root cells epidermis Original data
15 root cells cortex 140mM NaCl 20 hours 0.79 >More info 0.81 >More info root cells cortex standard 1 hour root cells cortex Original data
16 root cells stele 140mM NaCl 8 hours 0.79 >More info 0.79 >More info root cells stele standard 1 hour root cells stele Original data
17 root cells epidermis 140mM NaCl 8 hours 0.76 >More info 0.81 >More info root cells epidermis standard 1 hour root cells epidermis Original data
18 root cells cortex 140mM NaCl 8 hours 0.78 >More info 0.79 >More info root cells cortex standard 1 hour root cells cortex Original data
19 root cells epidermis 140mM NaCl 3 hours 0.75 >More info 0.81 >More info root cells epidermis standard 1 hour root cells epidermis Original data
20 root cells stele 140mM NaCl 3 hours 0.75 >More info 0.79 >More info root cells stele standard 1 hour root cells stele Original data
21 root cells cortex 140mM NaCl 3 hours 0.78 >More info 0.75 >More info root cells cortex standard 1 hour root cells cortex Original data
22 root cells cortex 140mM NaCl 1 hour 0.71 >More info 0.74 >More info root cells cortex standard 1 hour root cells cortex Original data
23 root cells stele 140mM NaCl 1 hour 0.69 >More info 0.74 >More info root cells stele standard 1 hour root cells stele Original data
24 upb1-1 elongation zone -0.60 >More info -0.77 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
25 root cells epidermis 140mM NaCl 1 hour 0.64 >More info 0.72 >More info root cells epidermis standard 1 hour root cells epidermis Original data
26 root stele pH4.6 0.63 >More info 0.72 >More info root stele pH5.7 Original data GEO bulk
27 line J1551-5 days control + 2 days salt s 0.61 >More info 0.69 >More info line J1551-7 days-control Original data
28 root Dosed gold 0.66 >More info 0.63 >More info root No gold .125 mM gold 24 h roots Original data
29 0.125 mM gold 24 h 0.66 >More info 0.63 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
30 AgNO3 3 h 0.53 >More info 0.75 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
31 root epidermis and lateral root cap pH4.6 0.59 >More info 0.68 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
32 bbx24 in Simulated Shade -0.57 >More info -0.67 >More info WT in simulated shade shade seedling Original data
33 rhd2 0.56 >More info 0.60 >More info WT Small excised segments of primary root tissue corresponding to root-hair elongation zone Original data GEO bulk
34 OXUPB1-2 meristematic zone 0.61 >More info 0.55 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
35 24h +Pi -0.58 >More info -0.54 >More info 24h -Pi root Original data GEO bulk
36 root endodermis and quiescent center pH4.6 0.45 >More info 0.65 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
37 line J2731-5 days control + 2 days salt s 0.45 >More info 0.65 >More info line J2731-7 days-control Original data
38 root longitudinal zone-3 pH 4.6 0.44 >More info 0.65 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
39 root epidermis and lateral root cap -S 0.43 >More info 0.66 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
40 hira-root -0.57 >More info -0.52 >More info WT-root root Original data
41 Chitosan 3h Treatment 0.51 >More info 0.57 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
42 Col-0 low oxygen 0.50 >More info 0.56 >More info Col-0 control low oxygen root Original data GEO bulk
43 5-Triiodobenzoic acid3 h 0.46 >More info 0.60 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
44 columella auxin 0.45 >More info 0.61 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
45 whole roots -Fe 6 hour 0.41 >More info 0.64 >More info whole roots standard Original data GEO bulk
46 epidermis auxin 0.49 >More info 0.55 >More info epidermis control 5 uM indole-3-acetic acid epidermis Original data GEO bulk
47 root longitudinal zone-4 NaCl 0.55 >More info 0.47 >More info root longitudinal zone-4 Original data GEO bulk
48 inhibitor B Treated 0.49 >More info 0.53 >More info Negative Control Original data GEO bulk
49 Root -Cs 0.51 >More info 0.50 >More info Control-root Original data GEO bulk
50 M6PR transgenic leaf 100mM NaCl -0.44 >More info -0.57 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
51 TNT-seedlings 0.35 >More info 0.65 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
52 SCL3 OE -0.55 >More info -0.44 >More info Col-0 whole root Original data GEO bulk
53 Heat shock optimum 0.34 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
54 8hr-pH4.5 0.40 >More info 0.58 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
55 root stele -S 0.38 >More info 0.60 >More info root stele pH5.7 Original data GEO bulk
56 roots IAA 0.42 >More info 0.56 >More info roots mock Original data GEO bulk
57 Chemically 0.40 >More info 0.58 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
58 Whole root - low pH 12H 0.43 >More info 0.54 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
59 CeO2 germinant -0.39 >More info -0.58 >More info Millipore Water germinant CeO2 seedling Original data
60 root cortex pH4.6 0.40 >More info 0.56 >More info root cortex pH5.7 Original data GEO bulk
61 oas-a1.1 Cd 18h 0.35 >More info 0.61 >More info Cd 18h root Root Original data GEO bulk
62 1h +Pi -0.46 >More info -0.50 >More info 1h -Pi root Original data GEO bulk
63 R. solani AG8 0.41 >More info 0.55 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
64 6h +Pi -0.39 >More info -0.56 >More info 6h -Pi root Original data GEO bulk
65 Fe starvation 72 h 0.40 >More info 0.54 >More info Control Original data GEO bulk
66 whole roots -Fe 72 hour 0.40 >More info 0.54 >More info whole roots standard Original data GEO bulk
67 Selenate (root) 0.52 >More info 0.42 >More info Ws (root) Original data GEO bulk
68 Root Selenate 0.52 >More info 0.42 >More info Root control 40 micromolar selenate Root Original data GEO bulk
69 toc1-1-53hr 0.23 >More info 0.71 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
70 Root dark control 7h 0.43 >More info 0.50 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
71 whole roots -Fe 48 hour 0.42 >More info 0.50 >More info whole roots standard Original data GEO bulk
72 SHR-GR Time 6H Dex 0.30 >More info 0.62 >More info SHR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
73 cpctry 0.31 >More info 0.61 >More info Col Original data GEO bulk
74 plant (tga2-5-6) 4h phytoprostane A1 0.40 >More info 0.51 >More info plant (tga2-5-6) 4h control Original data GEO bulk
75 (Col-0)+100 uM As 0.36 >More info 0.55 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
76 IAA/inhibitor B Treated 0.41 >More info 0.50 >More info IAA Treated Original data GEO bulk
77 Inflorescences Trp1 0.22 >More info 0.69 >More info Inflorescences ler inflorescences Original data GEO bulk
78 Shoot apex inflorescence (after bolting) 0.25 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
79 OPDA 4 h 0.37 >More info 0.53 >More info Col-0 Original data GEO bulk
80 plant (tga2-5-6) 4h OPDA 0.39 >More info 0.51 >More info plant (tga2-5-6) 4h control Original data GEO bulk
81 plant (Col-0) 4h OPDA 0.37 >More info 0.53 >More info plant (Col-0) 4h control Original data GEO bulk
82 Mutant axr3-1 (IAA) 0.33 >More info 0.57 >More info Col (IAA) Original data GEO bulk
83 Methyl Jasmonate 1 h 0.23 >More info 0.66 >More info Mock 1 h Original data Basic hormone treatment of seedlings
84 B.cinerea 18 h infection 0.24 >More info 0.65 >More info Mock 18 h Original data Botrytis cinerea infection
85 Botrytis cinerea 18h 0.24 >More info 0.65 >More info control 18h Original data GEO bulk
86 QC pSCR(QC pSCRBRI1) 0h BL 0.53 >More info 0.35 >More info WR 35S 0h BL brassinosteroid root Original data
87 red illumination +lincomycin 0.17 >More info 0.71 >More info red illumination -lincomycin Original data GEO bulk
88 toc1-1-85hr 0.34 >More info 0.53 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
89 toc1-1-73hr 0.30 >More info 0.57 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
90 roottip hypoxia total 0.30 >More info 0.56 >More info roottip control total Original data GEO bulk
91 seed germinating in countinuous light 24h SL 0.19 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
92 WT Root Hypoxia 0.35 >More info 0.50 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
93 siliques AtHb1 control 0.32 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
94 bri1-116 0.10 >More info 0.73 >More info Col seedling Original data GEO bulk
95 Leafminer damaged seedlings 0.26 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
96 root cap pGL2(QC pSCRBRI1) 0h BL 0.51 >More info 0.27 >More info WR 35S 0h BL brassinosteroid root Original data
97 QC pSCR 0h BL 0.50 >More info 0.28 >More info WR 35S 0h BL brassinosteroid root Original data
98 SHR-GR Time 1H Dex -0.25 >More info -0.53 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
99 toc1-1-77hr 0.28 >More info 0.50 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
100 Col BTH 0.10 >More info 0.67 >More info Col rosettes Original data GEO bulk
101 Starch sheath 5 days MS incubation 0.25 >More info 0.50 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
102 eds16 whole leaf 1dpi 0.14 >More info 0.59 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
103 Cs shoot -0.05 >More info -0.67 >More info control shoot Original data GEO bulk
104 Laer pretreat GA Flg22 1h 0.01 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
105 Col0-PsmES4326-24hpi 0.10 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
106 hira-protoplast 0.21 >More info 0.50 >More info WT-protoplast protoplast Original data
107 JA 3h 0.13 >More info 0.57 >More info EtOH 3h 3hr Original data GEO bulk
108 root - 01% oxygen - 48h 0.14 >More info 0.53 >More info root - 21% oxygen - 48h Original data GEO bulk
109 seedling 30 min S Exp -0.10 >More info -0.56 >More info seedling -S Exp seedling Original data
110 Light 3day hml 0.08 >More info 0.58 >More info 0h hml Original data
111 Whole root - low pH 1H 0.04 >More info 0.61 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
112 IAA7mII over-expressor IAA Treated -0.05 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
113 oas-a1.1 root -0.07 >More info -0.57 >More info WT-Untreated Root Original data GEO bulk
114 Full C2 T3 -0.08 >More info -0.52 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
115 shoots bhlh100/101 100uM Fe 0.08 >More info -0.67 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
116 gpa1 +ABA GC -0.07 >More info -0.50 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
117 opr3 JA 2 h 0.07 >More info 0.50 >More info opr3 0 h Original data GEO bulk
118 ms35 silique stage 7 -0.09 >More info 0.60 >More info Ler 6.7 anther and filament Original data GEO bulk
119 root - 04% oxygen - 2h -0.04 >More info 0.54 >More info root - 21% oxygen - 2h Original data GEO bulk
120 CCA1-ox 6am non-polysomal -0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
121 root - 08% oxygen - 30min -0.13 >More info 0.54 >More info root - 21% oxygen - 30min Original data GEO bulk