4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root cells endodermis 140mM NaCl 3 hours
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Score Experiment Correlation from
root cells endodermis 140mM NaCl 3 hours		 Correlation to
root cells endodermis 140mM NaCl 3 hours		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root cells endodermis 140mM NaCl 3 hours 1.00 >More info 1.00 >More info root cells endodermis standard 1 hour root cells endodermis Original data
2 root cells endodermis 140mM NaCl 8 hours 0.90 >More info 0.91 >More info root cells endodermis standard 1 hour root cells endodermis Original data
3 root cells endodermis 140mM NaCl 20 hours 0.85 >More info 0.88 >More info root cells endodermis standard 1 hour root cells endodermis Original data
4 root cells endodermis 140mM NaCl 1 hour 0.84 >More info 0.87 >More info root cells endodermis standard 1 hour root cells endodermis Original data
5 root cells endodermis 140mM NaCl 48 hours 0.84 >More info 0.87 >More info root cells endodermis standard 1 hour root cells endodermis Original data
6 root cells stele 140mM NaCl 3 hours 0.84 >More info 0.86 >More info root cells stele standard 1 hour root cells stele Original data
7 root cells stele 140mM NaCl 8 hours 0.83 >More info 0.84 >More info root cells stele standard 1 hour root cells stele Original data
8 root cells endodermis 140mM NaCl 32 hours 0.80 >More info 0.87 >More info root cells endodermis standard 1 hour root cells endodermis Original data
9 root cells cortex 140mM NaCl 8 hours 0.82 >More info 0.84 >More info root cells cortex standard 1 hour root cells cortex Original data
10 root cells cortex 140mM NaCl 3 hours 0.81 >More info 0.83 >More info root cells cortex standard 1 hour root cells cortex Original data
11 root cells epidermis 140mM NaCl 3 hours 0.76 >More info 0.81 >More info root cells epidermis standard 1 hour root cells epidermis Original data
12 root cells cortex 140mM NaCl 1 hour 0.75 >More info 0.81 >More info root cells cortex standard 1 hour root cells cortex Original data
13 root cells epidermis 140mM NaCl 48 hours 0.74 >More info 0.81 >More info root cells epidermis standard 1 hour root cells epidermis Original data
14 root cells cortex 140mM NaCl 48 hours 0.75 >More info 0.80 >More info root cells cortex standard 1 hour root cells cortex Original data
15 root cells epidermis 140mM NaCl 8 hours 0.74 >More info 0.80 >More info root cells epidermis standard 1 hour root cells epidermis Original data
16 root cells stele 140mM NaCl 1 hour 0.74 >More info 0.80 >More info root cells stele standard 1 hour root cells stele Original data
17 root cells cortex 140mM NaCl 20 hours 0.72 >More info 0.81 >More info root cells cortex standard 1 hour root cells cortex Original data
18 root cells stele 140mM NaCl 32 hours 0.71 >More info 0.81 >More info root cells stele standard 1 hour root cells stele Original data
19 root cells cortex 140mM NaCl 32 hours 0.73 >More info 0.78 >More info root cells cortex standard 1 hour root cells cortex Original data
20 root cells stele 140mM NaCl 48 hours 0.71 >More info 0.79 >More info root cells stele standard 1 hour root cells stele Original data
21 root cells epidermis 140mM NaCl 20 hours 0.72 >More info 0.78 >More info root cells epidermis standard 1 hour root cells epidermis Original data
22 root cells stele 140mM NaCl 20 hours 0.70 >More info 0.79 >More info root cells stele standard 1 hour root cells stele Original data
23 root cells epidermis 140mM NaCl 32 hours 0.69 >More info 0.78 >More info root cells epidermis standard 1 hour root cells epidermis Original data
24 root Dosed gold 0.76 >More info 0.66 >More info root No gold .125 mM gold 24 h roots Original data
25 0.125 mM gold 24 h 0.76 >More info 0.66 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
26 AgNO3 3 h 0.61 >More info 0.79 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
27 root cells epidermis 140mM NaCl 1 hour 0.63 >More info 0.73 >More info root cells epidermis standard 1 hour root cells epidermis Original data
28 root longitudinal zone-4 NaCl 0.68 >More info 0.67 >More info root longitudinal zone-4 Original data GEO bulk
29 root stele pH4.6 0.65 >More info 0.69 >More info root stele pH5.7 Original data GEO bulk
30 24h +Pi -0.71 >More info -0.61 >More info 24h -Pi root Original data GEO bulk
31 5-Triiodobenzoic acid3 h 0.63 >More info 0.66 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
32 root endodermis and quiescent center 40 mM NaCl 0.56 >More info 0.72 >More info root endodermis and quiescent center Original data GEO bulk
33 root longitudinal zone-3 pH 4.6 0.57 >More info 0.71 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
34 bbx24 in Simulated Shade -0.54 >More info -0.73 >More info WT in simulated shade shade seedling Original data
35 whole roots 140 mM NaCl 4 hour 0.57 >More info 0.70 >More info whole roots standard Original data GEO bulk
36 root endodermis and quiescent center pH4.6 0.58 >More info 0.68 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
37 Whole root - low pH 12H 0.58 >More info 0.68 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
38 Chitosan 3h Treatment 0.64 >More info 0.62 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
39 OXUPB1-2 meristematic zone 0.68 >More info 0.57 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
40 Fenclorim 4hr 0.67 >More info 0.58 >More info Acetone 4hr root Original data GEO bulk
41 root epidermis and lateral root cap pH4.6 0.57 >More info 0.67 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
42 8hr-pH4.5 0.58 >More info 0.64 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
43 NaCl Col 0.61 >More info 0.61 >More info Col Original data GEO bulk
44 TNT-seedlings 0.52 >More info 0.70 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
45 Phytoprostane A1 4 h 0.61 >More info 0.60 >More info Col-0 Original data GEO bulk
46 Cocultivation 8 hrs root 0.64 >More info 0.56 >More info Mock cocultivation 8 hrs root Root Original data
47 whole roots -Fe 72 hour 0.53 >More info 0.66 >More info whole roots standard Original data GEO bulk
48 oas-a1.1 Cd 18h 0.59 >More info 0.60 >More info Cd 18h root Root Original data GEO bulk
49 Fe starvation 72 h 0.53 >More info 0.66 >More info Control Original data GEO bulk
50 whole roots -Fe 48 hour 0.55 >More info 0.63 >More info whole roots standard Original data GEO bulk
51 line J1551-5 days control + 2 days salt s 0.54 >More info 0.63 >More info line J1551-7 days-control Original data
52 hira-root -0.58 >More info -0.57 >More info WT-root root Original data
53 6h +Pi -0.47 >More info -0.67 >More info 6h -Pi root Original data GEO bulk
54 P.p 30hai 0.62 >More info 0.51 >More info At-Control roots Original data GEO bulk
55 Fenclorim 24hr 0.61 >More info 0.51 >More info Acetone 24hr root Original data GEO bulk
56 whole roots 140 mM NaCl 1 hour 0.52 >More info 0.59 >More info whole roots standard Original data GEO bulk
57 ABA DFPM 0.64 >More info 0.47 >More info control Original data GEO bulk
58 Root -Cs 0.58 >More info 0.52 >More info Control-root Original data GEO bulk
59 upb1-1 elongation zone -0.52 >More info -0.58 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
60 SA 0.55 >More info 0.55 >More info WT mock Whole seedling Original data GEO bulk
61 CMP 4hr 0.56 >More info 0.54 >More info Acetone 4hr root Original data GEO bulk
62 B.cinerea 18 h infection 0.36 >More info 0.74 >More info Mock 18 h Original data Botrytis cinerea infection
63 Col-0 low oxygen 0.49 >More info 0.61 >More info Col-0 control low oxygen root Original data GEO bulk
64 Botrytis cinerea 18h 0.36 >More info 0.74 >More info control 18h Original data GEO bulk
65 R. solani AG8 0.47 >More info 0.61 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
66 Whole root - low pH 24H 0.48 >More info 0.60 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
67 oligomycin 4 h 0.56 >More info 0.50 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
68 plant (tga2-5-6) 4h phytoprostane A1 0.46 >More info 0.59 >More info plant (tga2-5-6) 4h control Original data GEO bulk
69 P.p 6hai 0.58 >More info 0.47 >More info At-Control roots Original data GEO bulk
70 CMP 24hr 0.57 >More info 0.48 >More info Acetone 24hr root Original data GEO bulk
71 epidermis auxin 0.51 >More info 0.53 >More info epidermis control 5 uM indole-3-acetic acid epidermis Original data GEO bulk
72 plant (Col-0) 4h phytoprostane A1 0.53 >More info 0.51 >More info plant (tga2-5-6) 4h control Original data GEO bulk
73 P.p 10.5hai 0.57 >More info 0.46 >More info At-Control roots Original data GEO bulk
74 Mutant axr3-1 0.42 >More info 0.61 >More info Col Original data GEO bulk
75 pepr1-1 Pepr2-3 +Pep2 2h -0.46 >More info -0.57 >More info WT +Pep2 2h Pep2 Original data GEO bulk
76 whole roots 140 mM NaCl 30 minutes 0.46 >More info 0.57 >More info whole roots standard Original data GEO bulk
77 root epidermis and lateral root cap 40 mM NaCl 0.50 >More info 0.52 >More info root epidermis and lateral root cap Original data GEO bulk
78 Oxidative Stress 3 h (root) -0.49 >More info -0.53 >More info Stress mock 3 h (root) Original data Stress treatments
79 root cortex pH4.6 0.48 >More info 0.54 >More info root cortex pH5.7 Original data GEO bulk
80 roots IAA 0.41 >More info 0.61 >More info roots mock Original data GEO bulk
81 line J2731-5 days control + 2 days salt s 0.47 >More info 0.55 >More info line J2731-7 days-control Original data
82 CeO2 germinant -0.33 >More info -0.69 >More info Millipore Water germinant CeO2 seedling Original data
83 Mutant axr3-1 (IAA) 0.36 >More info 0.65 >More info Col (IAA) Original data GEO bulk
84 whole roots -Fe 6 hour 0.36 >More info 0.64 >More info whole roots standard Original data GEO bulk
85 root hypoxia pSCR 0.49 >More info 0.51 >More info root hypoxia total hypoxia root Original data GEO bulk
86 inhibitor B Treated 0.48 >More info 0.52 >More info Negative Control Original data GEO bulk
87 Leafminer damaged seedlings 0.44 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
88 Col0-PsmES4326-24hpi 0.38 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
89 Root -K 0.48 >More info 0.51 >More info Control-root Original data GEO bulk
90 SCR 48hr-S 0.40 >More info 0.59 >More info SCR 0hr endodermis Original data
91 Osmotic Stress 24 h (root) 0.53 >More info 0.45 >More info Stress mock 24 h (root) Original data Stress treatments
92 K starvation (root) 0.48 >More info 0.50 >More info Ws (root) Original data GEO bulk
93 (Ws-2)+100 uM As 0.50 >More info 0.47 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
94 rhd2 0.52 >More info 0.45 >More info WT Small excised segments of primary root tissue corresponding to root-hair elongation zone Original data GEO bulk
95 siliques AtHb1 control 0.45 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
96 root control pSCR 0.51 >More info 0.45 >More info root control total control root Original data GEO bulk
97 toc1-1-53hr 0.27 >More info 0.69 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
98 ani1 T16 -0.53 >More info -0.42 >More info WT T16 root tissue Original data GEO bulk
99 Shoot -Cs 0.32 >More info 0.63 >More info Control-shoot Original data GEO bulk
100 (Col-0)+100 uM As 0.38 >More info 0.56 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
101 6-trichlorophenoxyacetic acid 3 h 0.53 >More info 0.40 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
102 Col BTH 0.26 >More info 0.67 >More info Col rosettes Original data GEO bulk
103 SCR 24hr-S 0.37 >More info 0.56 >More info SCR 0hr endodermis Original data
104 coi1-2 0.50 >More info 0.43 >More info Col-0 mock Whole seedling Original data GEO bulk
105 chito-tetramer 0.41 >More info 0.52 >More info Col Mock Original data GEO bulk
106 Botrytis cinerea 48h 0.34 >More info 0.59 >More info control 48h Original data GEO bulk
107 columella auxin 0.39 >More info 0.53 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
108 BR 0.42 >More info 0.50 >More info WT-mock BR dark-grown seedlings Original data GEO bulk
109 cpctry 0.30 >More info 0.62 >More info Col Original data GEO bulk
110 IAA/inhibitor B Treated 0.38 >More info 0.53 >More info IAA Treated Original data GEO bulk
111 rosettes WT drought 0.40 >More info 0.51 >More info rosettes WT watered Original data GEO bulk
112 gpa1-4/agb1-2 ozone 2d -0.26 >More info -0.65 >More info Col ozone 2d ozone Original data GEO bulk
113 aux1 mutant roots ethylene 0.26 >More info 0.65 >More info roots air Original data GEO bulk
114 Laer pretreat GA Flg22 1h 0.20 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
115 M6PR transgenic leaf 100mM NaCl -0.36 >More info -0.54 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
116 WT+H2O2 0.40 >More info 0.50 >More info WT H2O2 Original data GEO bulk
117 QC pSCR(QC pSCRBRI1) 0h BL 0.54 >More info 0.34 >More info WR 35S 0h BL brassinosteroid root Original data
118 P.p 2.5hai 0.34 >More info 0.54 >More info At-Control roots Original data GEO bulk
119 QC pSCR 0h BL 0.52 >More info 0.36 >More info WR 35S 0h BL brassinosteroid root Original data
120 toc1-1-73hr 0.25 >More info 0.63 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
121 Nicotinamide-53hr 0.30 >More info 0.58 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
122 Chemically 0.31 >More info 0.57 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
123 sid2-2 9 hpi A. brassicicola 0.30 >More info 0.56 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
124 Heat shock optimum 0.21 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
125 root cap pGL2(QC pSCRBRI1) 0h BL 0.54 >More info 0.31 >More info WR 35S 0h BL brassinosteroid root Original data
126 SCR 72hr-S 0.34 >More info 0.51 >More info SCR 0hr endodermis Original data
127 dor drought 0.35 >More info 0.50 >More info WT drought Original data GEO bulk
128 root hypoxia total 0.33 >More info 0.51 >More info root control total Original data GEO bulk
129 toc1-1-85hr 0.28 >More info 0.56 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
130 (Col-0)+200 uM As 0.31 >More info 0.53 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
131 roottip hypoxia total 0.24 >More info 0.60 >More info roottip control total Original data GEO bulk
132 bri1-116 0.11 >More info 0.73 >More info Col seedling Original data GEO bulk
133 inhibitor A Treated 0.33 >More info 0.50 >More info Negative Control Original data GEO bulk
134 toc1-1-77hr 0.32 >More info 0.50 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
135 root - 01% oxygen - 48h 0.27 >More info 0.54 >More info root - 21% oxygen - 48h Original data GEO bulk
136 root longitudinal zone-3 NaCl 0.29 >More info 0.52 >More info root longitudinal zone-3 Original data GEO bulk
137 Col-0 V. longisporum-inoculated 48 hpi 0.27 >More info 0.54 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
138 whole roots -Fe 12 hour 0.50 >More info 0.28 >More info whole roots standard Original data GEO bulk
139 long 17-degree- 0.15 >More info 0.62 >More info control long Original data GEO bulk
140 red illumination +lincomycin 0.12 >More info 0.65 >More info red illumination -lincomycin Original data GEO bulk
141 ein2-1 9 hpi A. brassicicola 0.25 >More info 0.51 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
142 IAA7mII over-expressor IAA Treated 0.04 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
143 Whole root - S 24H 0.17 >More info 0.50 >More info Whole root - S 0H Original data GEO bulk
144 seed germinating in countinuous light 24h SL -0.00 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
145 Shoot apex inflorescence (after bolting) 0.01 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
146 agb1 gpa1 +ABA GC -0.15 >More info -0.51 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
147 shoots bhlh100/101 100uM Fe 0.04 >More info -0.68 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
148 ANAC102 over-expressor 0.05 >More info 0.53 >More info C24 Original data GEO bulk
149 root - 01% oxygen - 2h 0.02 >More info 0.55 >More info root - 21% oxygen - 2h Original data GEO bulk
150 Whole root - low pH 1H 0.05 >More info 0.50 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
151 root - 08% oxygen - 30min 0.01 >More info 0.52 >More info root - 21% oxygen - 30min Original data GEO bulk
152 CCA1-ox 6am non-polysomal -0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
153 agb1 -ABA GC 0.04 >More info -0.51 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
154 Red/FR Light45min -0.06 >More info 0.50 >More info FarRed Light 45min Original data Light treatments
155 roots ethylene -0.17 >More info 0.54 >More info roots air Original data GEO bulk
156 root - 04% oxygen - 2h -0.24 >More info 0.58 >More info root - 21% oxygen - 2h Original data GEO bulk